diff PedToFasta/pedToFasta.xml @ 4:10627af23f10 draft

planemo upload

--- a/PedToFasta/pedToFasta.xml	Fri Jul 10 10:38:43 2015 -0400
+++ b/PedToFasta/pedToFasta.xml	Tue Dec 15 05:18:02 2015 -0500
@@ -7,6 +7,12 @@
     <requirements>
         <requirement type="binary">perl</requirement>
     </requirements>
+
+    <!-- [STRONGLY RECOMMANDED] Exit code rules -->
+    <stdio>
+            <!-- [HELP] If no exit code rule is defined, the tool will stop if anything is written to STDERR -->
+        <exit_code range="1:" level="fatal" />
+     </stdio>
     
     <!-- [OPTIONAL] Command to be executed to get the tool's version string -->
     <version_command>
@@ -31,18 +37,12 @@
 	<data name="fileout" type="data" format="fasta" label="${fileout_label}.fa" />
     </outputs>
     
-    <!-- [STRONGLY RECOMMANDED] Exit code rules -->
-    <stdio>
-        <!-- [HELP] If no exit code rule is defined, the tool will stop if anything is written to STDERR -->
-        <exit_code range="1:" level="fatal" />
-    </stdio>
-    
     <!-- [OPTIONAL] Tests to be run manually by the Galaxy admin -->
     <tests>
         <!-- [HELP] Test files have to be in the ~/test-data directory -->
         <test>
-         <param name="filein" value="sample.ped" />
-         <output name="fileout" file="result.fa" />
+         <param name="filein" value="ped2fasta-sample.ped" />
+         <output name="fileout" file="ped2fasta-result.fa" />
         </test>
     </tests>