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Added a dependency on R, since the Analyze Covariates tool generates an R script for plotting residual error.
author devteam
date Wed, 02 Apr 2014 16:04:37 -0400
parents be6bede22459
children
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Program Name: org.broadinstitute.sting.analyzecovariates.AnalyzeCovariates
Reading in input csv file...
...Done!
Writing out intermediate tables for R...
Writing out data tables for read group: A Fake phiX Sample	with 340 observations	and aggregate residual error = -9.136
...Done!
Calling analysis R scripts and writing out figures...
Analyzing read group: A Fake phiX Sample
...Done!