Mercurial > repos > devteam > blat_coverage_report
changeset 0:30f0948c649c draft default tip
Imported from capsule None
| author | devteam |
|---|---|
| date | Mon, 19 May 2014 12:34:01 -0400 |
| parents | |
| children | |
| files | blat_coverage_report.py blat_coverage_report.xml test-data/blat_coverage_report_test1.out test-data/blat_coverage_report_test1.txt |
| diffstat | 4 files changed, 2154 insertions(+), 0 deletions(-) [+] |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/blat_coverage_report.py Mon May 19 12:34:01 2014 -0400 @@ -0,0 +1,107 @@ +#!/usr/bin/env python + +import os, sys + +assert sys.version_info[:2] >= ( 2, 4 ) + +def stop_err( msg ): + sys.stderr.write( "%s\n" % msg ) + sys.exit() + +def reverse_complement(s): + complement_dna = {"A":"T", "T":"A", "C":"G", "G":"C", "a":"t", "t":"a", "c":"g", "g":"c", "N":"N", "n":"n" , ".":"."} + reversed_s = [] + for i in s: + reversed_s.append(complement_dna[i]) + reversed_s.reverse() + return "".join(reversed_s) + +def __main__(): + nuc_index = {'a':0,'t':1,'c':2,'g':3} + diff_hash = {} # key = (chrom, index) + infile = sys.argv[1] + outfile = sys.argv[2] + invalid_lines = 0 + invalid_chars = 0 + data_id = '' + data_seq = '' + + for i, line in enumerate( open( infile ) ): + line = line.rstrip( '\r\n' ) + if not line or line.startswith( '#' ): + continue + fields = line.split() + if len(fields) != 23: # standard number of pslx columns + invalid_lines += 1 + continue + if not fields[0].isdigit(): + invalid_lines += 1 + continue + read_id = fields[9] + chrom = fields[13] + try: + block_count = int(fields[17]) + except: + invalid_lines += 1 + continue + block_size = fields[18].split(',') + read_start = fields[19].split(',') + chrom_start = fields[20].split(',') + read_seq = fields[21].split(',') + chrom_seq = fields[22].split(',') + + for j in range(block_count): + try: + this_block_size = int(block_size[j]) + this_read_start = int(read_start[j]) + this_chrom_start = int(chrom_start[j]) + except: + invalid_lines += 1 + break + this_read_seq = read_seq[j] + this_chrom_seq = chrom_seq[j] + + if not this_read_seq.isalpha(): + continue + if not this_chrom_seq.isalpha(): + continue + + # brut force to check coverage + for k in range(this_block_size): + cur_index = this_chrom_start+k + sub_a = this_read_seq[k:(k+1)].lower() + sub_b = this_chrom_seq[k:(k+1)].lower() + if not diff_hash.has_key((chrom, cur_index)): + try: + diff_hash[(chrom, cur_index)] = [0,0,0,0,sub_b.upper()] # a, t, c, g, ref. nuc. + except Exception, e: + stop_err( str( e ) ) + if sub_a in ['a','t','c','g']: + diff_hash[(chrom, cur_index)][nuc_index[(sub_a)]] += 1 + else: + invalid_chars += 1 + + outputfh = open(outfile, 'w') + outputfh.write( "##title\tlocation\tref.\tcov.\tA\tT\tC\tG\n" ) + keys = diff_hash.keys() + keys.sort() + for i in keys: + (chrom, location) = i + sum = diff_hash[ (i) ][ 0 ] + diff_hash[ ( i ) ][ 1 ] + diff_hash[ ( i ) ][ 2 ] + diff_hash[ ( i ) ][ 3 ] # did not include N's + if sum == 0: + continue + ratio_A = diff_hash[ ( i ) ][ 0 ] * 100.0 / sum + ratio_T = diff_hash[ ( i ) ][ 1 ] * 100.0 / sum + ratio_C = diff_hash[ ( i ) ][ 2 ] * 100.0 / sum + ratio_G = diff_hash[ ( i ) ][ 3 ] * 100.0 / sum + (title_head, title_tail) = os.path.split(chrom) + result = "%s\t%s\t%s\t%d\tA(%0.0f)\tT(%0.0f)\tC(%0.0f)\tG(%0.0f)\n" % ( title_tail, location, diff_hash[(i)][4], sum, ratio_A, ratio_T, ratio_C, ratio_G ) + outputfh.write(result) + outputfh.close() + + if invalid_lines: + print 'Skipped %d invalid lines. ' % ( invalid_lines ) + if invalid_chars: + print 'Skipped %d invalid characters in the alignment. ' % (invalid_chars) + +if __name__ == '__main__': __main__() \ No newline at end of file
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/blat_coverage_report.xml Mon May 19 12:34:01 2014 -0400 @@ -0,0 +1,75 @@ +<tool id="generate_coverage_report" name="Polymorphism of the Reads" version="1.0.0"> + <description>the percentage of reads supporting each nucleotide at each location</description> + <command interpreter="python">blat_coverage_report.py $input1 $output1</command> + <inputs> + <param name="input1" type="data" format="tabular" label="Alignment result"/> + </inputs> + <outputs> + <data name="output1" format="tabular"/> + </outputs> + <tests> + <test> + <param name="input1" value="blat_coverage_report_test1.txt" ftype="tabular" /> + <output name="output1" file="blat_coverage_report_test1.out" /> + </test> + </tests> + <help> + +.. class:: warningmark + +**IMPORTANT**. Only works for BLAT **standard** or **pslx** output formats (hint: to output pslx format, add **-out=pslx** in the command). + +----- + +**What it does** + + The tool will generate a table of 6 columns as following: + +- 1st column: chromosome id. + +- 2nd column: chromosome location. + +- 3rd column: the nucleotide from reference genome at the chromosome location (2nd column). + +- 4th column: total coverage of the reads (number of reads that were mapped to the chromosome location). + +- 5th column: percentage of reads that support nucleotide **A** at this location. + +- 6th column: percentage of reads that support nucleotide **T** at this location. + +- 7th column: percentage of reads that support nucleotide **C** at this location. + +- 8th column: percentage of reads that support nucleotide **G** at this location. + + +----- + +**Example** + +- The BLAT pslx results look like the following (tab separated with sequence at the end):: + + 30 0 0 0 0 0 0 0 + seq0 30 0 30 chr 4639675 4549207 4549237 1 30, 0, 4549207, cggacagcgccgccaccaacaaagccacca, cggacagcgccgccaccaacaaagccacca, + 30 0 0 0 0 0 0 0 + seq1 30 0 30 chr 4639675 614777 614807 1 30, 0, 614777, aaaacaccggatgctccggcgctggcagat, aaaacaccggatgctccggcgctggcagat, + 28 1 0 0 0 0 0 0 + seq2 30 0 29 chr 4639675 3289283 3289312 1 29, 0, 3289283, tttgcttttagtacaccggattcagaacc, tttgctttcagtacaccggattcagaacc, + 30 0 0 0 0 0 0 0 + seq4 30 0 30 chr 4639675 2665584 2665614 1 30, 0, 2665584, cacgctacgtgcgcccccgcccagaaggcg, cacgctacgtgcgcccccgcccagaaggcg, + + The 14th column is the chromosome id, and the 16th and 17th columns shows the reads were mapped to chromosome start and end locations. + +- The report showed overall coverage of reads on each chromosome location (partial result):: + + +-------+----------+------+------+--------+------+--------+------+ + | title | location | ref. | cov. | A | T | C | G | + +-------+----------+------+------+--------+------+--------+------+ + | chr | 614777 | A | 1 | A(100) | T(0) | C(0) | G(0) | + | chr | 614778 | A | 1 | A(100) | T(0) | C(0) | G(0) | + | chr | 614779 | A | 1 | A(100) | T(0) | C(0) | G(0) | + +-------+----------+------+------+--------+------+--------+------+ + +----- + +**Reference** + + **BLAT**: Kent, W James, BLAT--the BLAST-like alignment tool. (2002) Genome Research:12(4) 656-664. + + </help> +</tool>
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/blat_coverage_report_test1.out Mon May 19 12:34:01 2014 -0400 @@ -0,0 +1,1908 @@ +##title location ref. cov. A T C G +chr 159366 G 1 A(0) T(0) C(0) G(100) +chr 159367 G 1 A(0) T(0) C(0) G(100) +chr 159368 C 1 A(0) T(0) C(100) G(0) +chr 159369 A 1 A(100) T(0) C(0) G(0) +chr 159370 A 1 A(100) T(0) C(0) G(0) +chr 159371 C 1 A(0) T(0) C(100) G(0) +chr 159372 G 1 A(0) T(0) C(0) G(100) +chr 159373 C 1 A(0) T(0) C(100) G(0) +chr 159374 A 1 A(100) T(0) C(0) G(0) +chr 159375 G 1 A(0) T(0) C(0) G(100) +chr 159376 G 1 A(0) T(0) C(0) G(100) +chr 159377 C 1 A(0) T(0) C(100) G(0) +chr 159378 G 1 A(0) T(0) C(0) G(100) +chr 159379 C 1 A(0) T(0) C(100) G(0) +chr 159380 A 1 A(100) T(0) C(0) G(0) +chr 159381 T 1 A(0) T(100) C(0) G(0) +chr 159382 G 1 A(0) T(0) C(0) G(100) +chr 159383 A 1 A(100) T(0) C(0) G(0) +chr 159384 T 1 A(0) T(100) C(0) G(0) +chr 159385 T 1 A(0) T(100) C(0) G(0) +chr 159386 C 1 A(0) T(0) C(100) G(0) +chr 159387 T 1 A(0) T(100) C(0) G(0) +chr 159388 G 1 A(0) T(0) C(0) G(100) +chr 159389 C 1 A(0) T(0) C(100) G(0) +chr 159390 T 1 A(0) T(100) C(0) G(0) +chr 159391 T 1 A(0) T(100) C(0) G(0) +chr 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T 1 A(0) T(100) C(0) G(0) +chr 614789 G 1 A(0) T(0) C(0) G(100) +chr 614790 C 1 A(0) T(0) C(100) G(0) +chr 614791 T 1 A(0) T(100) C(0) G(0) +chr 614792 C 1 A(0) T(0) C(100) G(0) +chr 614793 C 1 A(0) T(0) C(100) G(0) +chr 614794 G 1 A(0) T(0) C(0) G(100) +chr 614795 G 1 A(0) T(0) C(0) G(100) +chr 614796 C 1 A(0) T(0) C(100) G(0) +chr 614797 G 1 A(0) T(0) C(0) G(100) +chr 614798 C 1 A(0) T(0) C(100) G(0) +chr 614799 T 1 A(0) T(100) C(0) G(0) +chr 614800 G 1 A(0) T(0) C(0) G(100) +chr 614801 G 1 A(0) T(0) C(0) G(100) +chr 614802 C 1 A(0) T(0) C(100) G(0) +chr 614803 A 1 A(100) T(0) C(0) G(0) +chr 614804 G 1 A(0) T(0) C(0) G(100) +chr 614805 A 1 A(100) T(0) C(0) G(0) +chr 614806 T 1 A(0) T(100) C(0) G(0) +chr 699412 G 1 A(0) T(0) C(0) G(100) +chr 699413 A 1 A(100) T(0) C(0) G(0) +chr 699414 A 1 A(100) T(0) C(0) G(0) +chr 699415 G 1 A(0) T(0) C(0) G(100) +chr 699416 G 1 A(0) T(0) C(0) G(100) +chr 699417 A 1 A(100) T(0) C(0) G(0) +chr 699418 T 1 A(0) T(100) C(0) G(0) +chr 699419 A 1 A(100) 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G(100) +chr 708508 A 1 A(100) T(0) C(0) G(0) +chr 708509 C 1 A(0) T(0) C(100) G(0) +chr 708510 G 1 A(0) T(0) C(0) G(100) +chr 708511 G 1 A(0) T(0) C(0) G(100) +chr 708512 T 1 A(0) T(100) C(0) G(0) +chr 708513 C 1 A(0) T(0) C(100) G(0) +chr 708514 A 1 A(100) T(0) C(0) G(0) +chr 708515 G 1 A(0) T(0) C(0) G(100) +chr 708516 C 1 A(0) T(0) C(100) G(0) +chr 708517 A 1 A(100) T(0) C(0) G(0) +chr 708518 G 1 A(0) T(0) C(0) G(100) +chr 708519 G 1 A(0) T(0) C(0) G(100) +chr 708520 G 1 A(0) T(0) C(0) G(100) +chr 708521 A 1 A(100) T(0) C(0) G(0) +chr 708522 T 1 A(0) T(100) C(0) G(0) +chr 708523 A 1 A(100) T(0) C(0) G(0) +chr 708524 C 1 A(0) T(0) C(100) G(0) +chr 708525 T 1 A(0) T(100) C(0) G(0) +chr 708526 T 1 A(0) T(100) C(0) G(0) +chr 708527 C 1 A(0) T(0) C(100) G(0) +chr 708528 C 1 A(0) T(0) C(100) G(0) +chr 708529 T 1 A(0) T(100) C(0) G(0) +chr 708530 G 1 A(0) T(0) C(0) G(100) +chr 708531 C 1 A(0) T(0) C(100) G(0) +chr 708532 A 1 A(100) T(0) C(0) G(0) +chr 962544 A 1 A(100) T(0) C(0) G(0) +chr 962545 C 1 A(0) T(0) C(100) G(0) +chr 962546 T 1 A(0) T(100) C(0) G(0) +chr 962547 G 1 A(0) T(0) C(0) G(100) +chr 962548 G 1 A(0) T(0) C(0) G(100) +chr 962549 G 1 A(0) T(0) C(0) G(100) +chr 962550 T 1 A(0) T(100) C(0) G(0) +chr 962551 T 1 A(0) T(100) C(0) G(0) +chr 962552 G 1 A(0) T(0) C(0) G(100) +chr 962553 C 1 A(0) T(0) C(100) G(0) +chr 962554 T 1 A(0) T(100) C(0) G(0) +chr 962555 C 1 A(0) T(0) C(100) G(0) +chr 962556 T 1 A(0) T(100) C(0) G(0) +chr 962557 G 1 A(0) T(0) C(0) G(100) +chr 962558 A 1 A(100) T(0) C(0) G(0) +chr 962559 A 1 A(100) T(0) C(0) G(0) +chr 962560 C 1 A(0) T(0) C(100) G(0) +chr 962561 A 1 A(100) T(0) C(0) G(0) +chr 962562 A 1 A(100) T(0) C(0) G(0) +chr 962563 G 1 A(0) T(0) C(0) G(100) +chr 962564 A 1 A(100) T(0) C(0) G(0) +chr 962565 A 1 A(100) T(0) C(0) G(0) +chr 962566 A 1 A(100) T(0) C(0) G(0) +chr 962567 G 1 A(0) T(0) C(0) G(100) +chr 962568 G 1 A(0) T(0) C(0) G(100) +chr 962569 C 1 A(0) T(0) C(100) G(0) +chr 962570 G 1 A(0) T(0) C(0) G(100) +chr 962571 C 1 A(0) T(0) C(100) G(0) +chr 962572 T 1 A(0) T(100) C(0) G(0) +chr 962573 A 1 A(100) T(0) C(0) G(0) +chr 965481 T 1 A(0) T(100) C(0) G(0) +chr 965482 A 1 A(100) T(0) C(0) G(0) +chr 965483 A 1 A(100) T(0) C(0) G(0) +chr 965484 G 1 A(0) T(0) C(0) G(100) +chr 965485 C 1 A(0) T(0) C(100) G(0) +chr 965486 C 1 A(0) T(0) C(100) G(0) +chr 965487 G 1 A(0) T(0) C(0) G(100) +chr 965488 T 1 A(0) T(100) C(0) G(0) +chr 965489 T 1 A(0) T(100) C(0) G(0) +chr 965490 A 1 A(100) T(0) C(0) G(0) +chr 965491 C 1 A(0) T(0) C(100) G(0) +chr 965492 T 1 A(0) T(100) C(0) G(0) +chr 965493 G 1 A(0) T(0) C(0) G(100) +chr 965494 G 1 A(0) T(0) C(0) G(100) +chr 965495 C 1 A(0) T(0) C(100) G(0) +chr 965496 A 1 A(100) T(0) C(0) G(0) +chr 965497 G 1 A(0) T(0) C(0) G(100) +chr 965498 C 1 A(0) T(0) C(100) G(0) +chr 965499 A 1 A(100) T(0) C(0) G(0) +chr 965500 A 1 A(100) T(0) C(0) G(0) +chr 965501 G 1 A(0) T(0) C(0) G(100) +chr 965502 T 1 A(0) T(100) C(0) G(0) +chr 965503 G 1 A(0) T(0) C(0) G(100) +chr 965504 C 1 A(0) T(0) C(100) G(0) +chr 965505 A 1 A(100) T(0) C(0) G(0) +chr 965506 G 1 A(0) T(0) C(0) G(100) +chr 965507 G 1 A(0) T(0) C(0) G(100) +chr 965508 C 1 A(0) T(0) C(100) G(0) +chr 965509 A 1 A(100) T(0) C(0) G(0) +chr 965510 A 1 A(100) T(0) C(0) G(0) +chr 1018466 G 1 A(0) T(0) C(0) G(100) +chr 1018467 T 1 A(0) T(100) C(0) G(0) +chr 1018468 T 1 A(0) T(100) C(0) G(0) +chr 1018469 G 1 A(0) T(0) C(0) G(100) +chr 1018470 T 1 A(0) T(100) C(0) G(0) +chr 1018471 A 1 A(100) T(0) C(0) G(0) +chr 1018472 A 1 A(100) T(0) C(0) G(0) +chr 1018473 G 1 A(0) T(0) C(0) G(100) +chr 1018474 C 1 A(0) T(0) C(100) G(0) +chr 1018475 G 1 A(0) T(0) C(0) G(100) +chr 1018476 T 1 A(0) T(100) C(0) G(0) +chr 1018477 C 1 A(0) T(0) C(100) G(0) +chr 1018478 A 1 A(100) T(0) C(0) G(0) +chr 1018479 G 1 A(0) T(0) C(0) G(100) +chr 1018480 A 1 A(100) T(0) C(0) G(0) +chr 1018481 A 1 A(100) T(0) C(0) G(0) +chr 1018482 C 1 A(0) T(0) C(100) G(0) +chr 1018483 C 1 A(0) T(0) C(100) G(0) +chr 1018484 G 1 A(0) T(0) C(0) G(100) +chr 1018485 A 1 A(100) T(0) C(0) G(0) +chr 1018486 T 1 A(0) T(100) C(0) G(0) +chr 1018487 G 1 A(0) T(0) C(0) G(100) +chr 1018488 C 1 A(0) T(0) C(100) G(0) +chr 1018489 G 1 A(0) T(0) C(0) G(100) +chr 1018490 G 1 A(0) T(0) C(0) G(100) +chr 1018491 T 1 A(0) T(100) C(0) G(0) +chr 1018492 C 1 A(0) T(0) C(100) G(0) +chr 1018493 G 1 A(0) T(0) C(0) G(100) +chr 1018494 G 1 A(0) T(0) C(0) G(100) +chr 1018495 T 1 A(0) T(100) C(0) G(0) +chr 1108478 G 1 A(0) T(0) C(0) G(100) +chr 1108479 T 1 A(0) T(100) C(0) G(0) +chr 1108480 T 1 A(0) T(100) C(0) G(0) +chr 1108481 A 1 A(100) T(0) C(0) G(0) +chr 1108482 T 1 A(0) T(100) C(0) G(0) +chr 1108483 C 1 A(0) T(0) C(100) G(0) +chr 1108484 C 1 A(0) T(0) C(100) G(0) +chr 1108485 A 1 A(100) T(0) C(0) G(0) +chr 1108486 T 1 A(0) T(100) C(0) G(0) +chr 1108487 T 1 A(0) T(100) C(0) G(0) +chr 1108488 A 1 A(100) T(0) C(0) G(0) +chr 1108489 A 1 A(100) T(0) C(0) G(0) +chr 1108490 A 1 A(100) T(0) C(0) G(0) +chr 1108491 A 1 A(100) T(0) C(0) G(0) +chr 1108492 T 1 A(0) T(100) C(0) G(0) +chr 1108493 A 1 A(100) T(0) C(0) G(0) +chr 1108494 G 1 A(0) T(0) C(0) G(100) +chr 1108495 A 1 A(100) T(0) C(0) G(0) +chr 1108496 T 1 A(0) T(100) C(0) G(0) +chr 1108497 C 1 A(0) T(0) C(100) G(0) +chr 1108498 G 1 A(0) T(0) C(0) G(100) +chr 1108499 G 1 A(0) T(0) C(0) G(100) +chr 1108500 A 1 A(100) T(0) C(0) G(0) +chr 1108501 T 1 A(0) T(100) C(0) G(0) +chr 1108502 C 1 A(0) T(0) C(100) G(0) +chr 1108503 G 1 A(0) T(0) C(0) G(100) +chr 1108504 A 1 A(100) T(0) C(0) G(0) +chr 1108505 T 1 A(0) T(100) C(0) G(0) +chr 1108506 A 1 A(100) T(0) C(0) G(0) +chr 1108507 T 1 A(0) T(100) C(0) G(0) +chr 1130738 A 1 A(100) T(0) C(0) G(0) +chr 1130739 A 1 A(100) T(0) C(0) G(0) +chr 1130740 T 1 A(0) T(100) C(0) G(0) +chr 1130741 C 1 A(0) T(0) C(100) G(0) +chr 1130742 T 1 A(0) T(100) C(0) G(0) +chr 1130743 G 1 A(0) T(0) C(0) G(100) +chr 1130744 G 1 A(0) T(0) C(0) G(100) +chr 1130745 C 1 A(0) T(0) C(100) G(0) +chr 1130746 G 1 A(0) T(0) C(0) G(100) +chr 1130747 A 1 A(100) T(0) C(0) G(0) +chr 1130748 A 1 A(100) T(0) C(0) G(0) +chr 1130749 T 1 A(0) T(100) C(0) G(0) +chr 1130750 G 1 A(0) T(0) C(0) G(100) +chr 1130751 C 1 A(0) T(0) C(100) G(0) +chr 1130752 T 1 A(0) T(100) C(0) G(0) +chr 1130753 G 1 A(0) T(0) C(0) G(100) +chr 1130754 A 1 A(100) T(0) C(0) G(0) +chr 1130755 T 1 A(0) T(100) C(0) G(0) +chr 1130756 A 1 A(100) T(0) C(0) G(0) +chr 1130757 G 1 A(0) T(0) C(0) G(100) +chr 1130758 C 1 A(0) T(0) C(100) G(0) +chr 1130759 G 1 A(0) T(0) C(0) G(100) +chr 1130760 T 1 A(0) T(100) C(0) G(0) +chr 1130761 G 1 A(0) T(0) C(0) G(100) +chr 1130762 A 1 A(100) T(0) C(0) G(0) +chr 1130763 C 1 A(0) T(0) C(100) G(0) +chr 1130764 C 1 A(0) T(0) C(100) G(0) +chr 1130765 G 1 A(0) T(0) C(0) G(100) +chr 1130766 G 1 A(0) T(0) C(0) G(100) +chr 1130767 T 1 A(0) T(100) C(0) G(0) +chr 1274949 C 1 A(0) T(0) C(100) G(0) +chr 1274950 C 1 A(0) T(0) C(100) G(0) +chr 1274951 A 1 A(100) T(0) C(0) G(0) +chr 1274952 C 1 A(0) T(0) C(100) G(0) +chr 1274953 G 1 A(0) T(0) C(0) G(100) +chr 1274954 G 1 A(0) T(0) C(0) G(100) +chr 1274955 T 1 A(0) T(100) C(0) G(0) +chr 1274956 G 1 A(0) T(0) C(0) G(100) +chr 1274957 A 1 A(100) T(0) C(0) G(0) +chr 1274958 T 1 A(0) T(100) C(0) G(0) +chr 1274959 A 1 A(100) T(0) C(0) G(0) +chr 1274960 T 1 A(0) T(100) C(0) G(0) +chr 1274961 C 1 A(0) T(0) C(100) G(0) +chr 1274962 T 1 A(0) T(100) C(0) G(0) +chr 1274963 G 1 A(0) T(0) C(0) G(100) +chr 1274964 G 1 A(0) T(0) C(0) G(100) +chr 1274965 T 1 A(0) T(100) C(0) G(0) +chr 1274966 G 1 A(0) T(0) C(0) G(100) +chr 1274967 C 1 A(0) T(0) C(100) G(0) +chr 1274968 C 1 A(0) T(0) C(100) G(0) +chr 1274969 A 1 A(100) T(0) C(0) G(0) +chr 1274970 T 1 A(0) T(100) C(0) G(0) +chr 1274971 A 1 A(100) T(0) C(0) G(0) +chr 1274972 C 1 A(0) T(0) C(100) G(0) +chr 1274973 T 1 A(0) T(100) C(0) G(0) +chr 1274974 G 1 A(0) T(0) C(0) G(100) +chr 1274975 A 1 A(100) T(0) C(0) G(0) +chr 1274976 T 1 A(0) T(100) C(0) G(0) +chr 1274977 A 1 A(100) T(0) C(0) G(0) +chr 1274978 A 1 A(100) T(0) C(0) G(0) +chr 1333814 G 1 A(0) T(0) C(0) G(100) +chr 1333815 A 1 A(100) T(0) C(0) G(0) +chr 1333816 G 1 A(0) T(0) C(0) G(100) +chr 1333817 A 1 A(100) T(0) C(0) G(0) +chr 1333818 A 1 A(100) T(0) C(0) G(0) +chr 1333819 T 1 A(0) T(100) C(0) G(0) +chr 1333820 C 1 A(0) T(0) C(100) G(0) +chr 1333821 A 1 A(100) T(0) C(0) G(0) +chr 1333822 G 1 A(0) T(0) C(0) G(100) +chr 1333823 G 1 A(0) T(0) C(0) G(100) +chr 1333824 G 1 A(0) T(0) C(0) G(100) +chr 1333825 C 1 A(0) T(0) C(100) G(0) +chr 1333826 T 1 A(0) T(100) C(0) G(0) +chr 1333827 T 1 A(0) T(100) C(0) G(0) +chr 1333828 C 1 A(0) T(0) C(100) G(0) +chr 1333829 G 1 A(0) T(0) C(0) G(100) +chr 1333830 C 1 A(0) T(0) C(100) G(0) +chr 1333831 A 1 A(100) T(0) C(0) G(0) +chr 1333832 A 1 A(100) T(0) C(0) G(0) +chr 1333833 C 1 A(0) T(0) C(100) G(0) +chr 1333834 C 1 A(0) T(0) C(100) G(0) +chr 1333835 C 1 A(0) T(0) C(100) G(0) +chr 1333836 T 1 A(0) T(100) C(0) G(0) +chr 1333837 G 1 A(0) T(0) C(0) G(100) +chr 1333838 T 1 A(0) T(100) C(0) G(0) +chr 1333839 C 1 A(0) T(0) C(100) G(0) +chr 1333840 A 1 A(100) T(0) C(0) G(0) +chr 1333841 T 1 A(0) T(100) C(0) G(0) +chr 1333842 T 1 A(0) T(100) C(0) G(0) +chr 1333843 A 1 A(100) T(0) C(0) G(0) +chr 1334399 G 1 A(0) T(0) C(0) G(100) +chr 1334400 G 1 A(0) T(0) C(0) G(100) +chr 1334401 T 1 A(0) T(100) C(0) G(0) +chr 1334402 T 1 A(0) T(100) C(0) G(0) +chr 1334403 A 1 A(100) T(0) C(0) G(0) +chr 1334404 A 1 A(100) T(0) C(0) G(0) +chr 1334405 C 1 A(0) T(0) C(100) G(0) +chr 1334406 C 1 A(0) T(0) C(100) G(0) +chr 1334407 T 1 A(0) T(100) C(0) G(0) +chr 1334408 C 1 A(0) T(0) C(100) G(0) +chr 1334409 G 1 A(0) T(0) C(0) G(100) +chr 1334410 A 1 A(100) T(0) C(0) G(0) +chr 1334411 A 1 A(100) T(0) C(0) G(0) +chr 1334412 T 1 A(0) T(100) C(0) G(0) +chr 1334413 A 1 A(100) T(0) C(0) G(0) +chr 1334414 T 1 A(0) T(100) C(0) G(0) +chr 1334415 C 1 A(0) T(0) C(100) G(0) +chr 1334416 T 1 A(0) T(100) C(0) G(0) +chr 1334417 C 1 A(0) T(0) C(100) G(0) +chr 1334418 G 1 A(0) T(0) C(0) G(100) +chr 1334419 G 1 A(0) T(0) C(0) G(100) +chr 1334420 C 1 A(0) T(0) C(100) G(0) +chr 1334421 A 1 A(100) T(0) C(0) G(0) +chr 1334422 A 1 A(100) T(0) C(0) G(0) +chr 1334423 A 1 A(100) T(0) C(0) G(0) +chr 1334424 G 1 A(0) T(0) C(0) G(100) +chr 1334425 C 1 A(0) T(0) C(100) G(0) +chr 1334426 A 1 A(100) T(0) C(0) G(0) +chr 1334427 G 1 A(0) T(0) C(0) G(100) +chr 1334428 T 1 A(0) T(100) C(0) G(0) +chr 1535123 G 1 A(0) T(0) C(0) G(100) +chr 1535124 A 1 A(100) T(0) C(0) G(0) +chr 1535125 A 1 A(100) T(0) C(0) G(0) +chr 1535126 C 1 A(0) T(0) C(100) G(0) +chr 1535127 A 1 A(100) T(0) C(0) G(0) +chr 1535128 G 1 A(0) T(0) C(0) G(100) +chr 1535129 C 1 A(0) T(0) C(100) G(0) +chr 1535130 A 1 A(100) T(0) C(0) G(0) +chr 1535131 G 1 A(0) T(0) C(0) G(100) +chr 1535132 C 1 A(0) T(0) C(100) G(0) +chr 1535133 A 1 A(100) T(0) C(0) G(0) +chr 1535134 G 1 A(0) T(0) C(0) G(100) +chr 1535135 C 1 A(0) T(0) C(100) G(0) +chr 1535136 G 1 A(0) T(0) C(0) G(100) +chr 1535137 A 1 A(100) T(0) C(0) G(0) +chr 1535138 C 1 A(0) T(0) C(100) G(0) +chr 1535139 G 1 A(0) T(0) C(0) G(100) +chr 1535140 T 1 A(0) T(100) C(0) G(0) +chr 1535141 G 1 A(0) T(0) C(0) G(100) +chr 1535142 G 1 A(0) T(0) C(0) G(100) +chr 1535143 T 1 A(0) T(100) C(0) G(0) +chr 1535144 G 1 A(0) T(0) C(0) G(100) +chr 1535145 C 1 A(0) T(0) C(100) G(0) +chr 1535146 G 1 A(0) T(0) C(0) G(100) +chr 1535147 C 1 A(0) T(0) C(100) G(0) +chr 1535148 C 1 A(0) T(0) C(100) G(0) +chr 1535149 C 1 A(0) T(0) C(100) G(0) +chr 1535150 G 1 A(0) T(0) C(0) G(100) +chr 1535151 C 1 A(0) T(0) C(100) G(0) +chr 1535152 G 1 A(0) T(0) C(0) G(100) +chr 1578065 A 1 A(100) T(0) C(0) G(0) +chr 1578066 A 1 A(100) T(0) C(0) G(0) +chr 1578067 A 1 A(100) T(0) C(0) G(0) +chr 1578068 A 1 A(100) T(0) C(0) G(0) +chr 1578069 A 1 A(100) T(0) C(0) G(0) +chr 1578070 A 1 A(100) T(0) C(0) G(0) +chr 1578071 C 1 A(0) T(0) C(100) G(0) +chr 1578072 G 1 A(0) T(0) C(0) G(100) +chr 1578073 G 1 A(0) T(0) C(0) G(100) +chr 1578074 C 1 A(0) T(0) C(100) G(0) +chr 1578075 T 1 A(0) T(100) C(0) G(0) +chr 1578076 G 1 A(0) T(0) C(0) G(100) +chr 1578077 A 1 A(100) T(0) C(0) G(0) +chr 1578078 C 1 A(0) T(0) C(100) G(0) +chr 1578079 A 1 A(100) T(0) C(0) G(0) +chr 1578080 A 1 A(100) T(0) C(0) G(0) +chr 1578081 A 1 A(100) T(0) C(0) G(0) +chr 1578082 G 1 A(0) T(0) C(0) G(100) +chr 1578083 C 1 A(0) T(0) C(100) G(0) +chr 1578084 T 1 A(0) T(100) C(0) G(0) +chr 1578085 T 1 A(0) T(100) C(0) G(0) +chr 1578086 T 1 A(0) T(100) C(0) G(0) +chr 1578087 C 1 A(0) T(0) C(100) G(0) +chr 1578088 A 1 A(100) T(0) C(0) G(0) +chr 1578089 A 1 A(100) T(0) C(0) G(0) +chr 1578090 A 1 A(100) T(0) C(0) G(0) +chr 1578091 C 1 A(0) T(0) C(100) G(0) +chr 1578092 T 1 A(0) T(100) C(0) G(0) +chr 1578093 G 1 A(0) T(0) C(0) G(100) +chr 1578094 A 1 A(100) T(0) C(0) G(0) +chr 1768655 C 1 A(0) T(0) C(100) G(0) +chr 1768656 C 1 A(0) T(0) C(100) G(0) +chr 1768657 A 1 A(100) T(0) C(0) G(0) +chr 1768658 G 1 A(0) T(0) C(0) G(100) +chr 1768659 G 1 A(0) T(0) C(0) G(100) +chr 1768660 C 1 A(0) T(0) C(100) G(0) +chr 1768661 A 1 A(100) T(0) C(0) G(0) +chr 1768662 C 1 A(0) T(0) C(100) G(0) +chr 1768663 T 1 A(0) T(100) C(0) G(0) +chr 1768664 C 1 A(0) T(0) C(100) G(0) +chr 1768665 C 1 A(0) T(0) C(100) G(0) +chr 1768666 G 1 A(0) T(0) C(0) G(100) +chr 1768667 C 1 A(0) T(0) C(100) G(0) +chr 1768668 C 1 A(0) T(0) C(100) G(0) +chr 1768669 A 1 A(100) T(0) C(0) G(0) +chr 1768670 T 1 A(0) T(100) C(0) G(0) +chr 1768671 A 1 A(100) T(0) C(0) G(0) +chr 1768672 T 1 A(0) T(100) C(0) G(0) +chr 1768673 T 1 A(0) T(100) C(0) G(0) +chr 1768674 T 1 A(0) T(100) C(0) G(0) +chr 1768675 T 1 A(0) T(100) C(0) G(0) +chr 1768676 T 1 A(0) T(100) C(0) G(0) +chr 1768677 G 1 A(0) T(0) C(0) G(100) +chr 1768678 C 1 A(0) T(0) C(100) G(0) +chr 1768679 C 1 A(0) T(0) C(100) G(0) +chr 1768680 A 1 A(100) T(0) C(0) G(0) +chr 1768681 T 1 A(0) T(100) C(0) G(0) +chr 1768682 G 1 A(0) T(0) C(0) G(100) +chr 1768683 A 1 A(100) T(0) C(0) G(0) +chr 1768684 C 1 A(0) T(0) C(100) G(0) +chr 1781311 T 1 A(0) T(100) C(0) G(0) +chr 1781312 G 1 A(0) T(0) C(0) G(100) +chr 1781313 A 1 A(100) T(0) C(0) G(0) +chr 1781314 A 1 A(100) T(0) C(0) G(0) +chr 1781315 T 1 A(0) T(100) C(0) G(0) +chr 1781316 T 1 A(0) T(100) C(0) G(0) +chr 1781317 T 1 A(0) T(100) C(0) G(0) +chr 1781318 A 1 A(100) T(0) C(0) G(0) +chr 1781319 C 1 A(0) T(0) C(100) G(0) +chr 1781320 C 1 A(0) T(0) C(100) G(0) +chr 1781321 G 1 A(0) T(0) C(0) G(100) +chr 1781322 T 1 A(0) T(100) C(0) G(0) +chr 1781323 T 1 A(0) T(100) C(0) G(0) +chr 1781324 A 1 A(100) T(0) C(0) G(0) +chr 1781325 T 1 A(0) T(100) C(0) G(0) +chr 1781326 C 1 A(0) T(0) C(100) G(0) +chr 1781327 T 1 A(0) T(100) C(0) G(0) +chr 1781328 A 1 A(100) T(0) C(0) G(0) +chr 1781329 T 1 A(0) T(100) C(0) G(0) +chr 1781330 C 1 A(0) T(0) C(100) G(0) +chr 1781331 T 1 A(0) T(100) C(0) G(0) +chr 1781332 T 1 A(0) T(100) C(0) G(0) +chr 1781333 G 1 A(0) T(0) C(0) G(100) +chr 1781334 C 1 A(0) T(0) C(100) G(0) +chr 1781335 C 1 A(0) T(0) C(100) G(0) +chr 1781336 T 1 A(0) T(100) C(0) G(0) +chr 1781337 G 1 A(0) T(0) C(0) G(100) +chr 1781338 C 1 A(0) T(0) C(100) G(0) +chr 1781339 C 1 A(0) T(0) C(100) G(0) +chr 1781340 T 1 A(0) T(100) C(0) G(0) +chr 1860631 G 1 A(0) T(0) C(0) G(100) +chr 1860632 T 1 A(0) T(100) C(0) G(0) +chr 1860633 G 1 A(0) T(0) C(0) G(100) +chr 1860634 G 1 A(0) T(0) C(0) G(100) +chr 1860635 T 1 A(0) T(100) C(0) G(0) +chr 1860636 C 1 A(0) T(0) C(100) G(0) +chr 1860637 T 1 A(0) T(100) C(0) G(0) +chr 1860638 C 1 A(0) T(0) C(100) G(0) +chr 1860639 A 1 A(100) T(0) C(0) G(0) +chr 1860640 A 1 A(100) T(0) C(0) G(0) +chr 1860641 G 1 A(0) T(0) C(0) G(100) +chr 1860642 C 1 A(0) T(0) C(100) G(0) +chr 1860643 C 1 A(0) T(0) C(100) G(0) +chr 1860644 C 1 A(0) T(0) C(100) G(0) +chr 1860645 A 1 A(100) T(0) C(0) G(0) +chr 1860646 A 1 A(100) T(0) C(0) G(0) +chr 1860647 A 1 A(100) T(0) C(0) G(0) +chr 1860648 G 1 A(0) T(0) C(0) G(100) +chr 1860649 G 1 A(0) T(0) C(0) G(100) +chr 1860650 A 1 A(100) T(0) C(0) G(0) +chr 1860651 A 1 A(100) T(0) C(0) G(0) +chr 1860652 G 1 A(0) T(0) C(0) G(100) +chr 1860653 A 1 A(100) T(0) C(0) G(0) +chr 1860654 G 1 A(0) T(0) C(0) G(100) +chr 1860655 T 1 A(0) T(100) C(0) G(0) +chr 1860656 G 1 A(0) T(0) C(0) G(100) +chr 1860657 A 1 A(100) T(0) C(0) G(0) +chr 1860658 G 1 A(0) T(0) C(0) G(100) +chr 1860659 G 1 A(0) T(0) C(0) G(100) +chr 1860660 C 1 A(0) T(0) C(100) G(0) +chr 1904984 A 1 A(100) T(0) C(0) G(0) +chr 1904985 C 1 A(0) T(0) C(100) G(0) +chr 1904986 C 1 A(0) T(0) C(100) G(0) +chr 1904987 C 1 A(0) T(0) C(100) G(0) +chr 1904988 T 1 A(0) T(100) C(0) G(0) +chr 1904989 T 1 A(0) T(100) C(0) G(0) +chr 1904990 C 1 A(0) T(0) C(100) G(0) +chr 1904991 T 1 A(0) T(100) C(0) G(0) +chr 1904992 T 1 A(0) T(100) C(0) G(0) +chr 1904993 T 1 A(0) T(100) C(0) G(0) +chr 1904994 C 1 A(0) T(0) C(100) G(0) +chr 1904995 G 1 A(0) T(0) C(0) G(100) +chr 1904996 C 1 A(0) T(0) C(100) G(0) +chr 1904997 C 1 A(0) T(0) C(100) G(0) +chr 1904998 A 1 A(100) T(0) C(0) G(0) +chr 1904999 T 1 A(0) T(100) C(0) G(0) +chr 1905000 A 1 A(100) T(0) C(0) G(0) +chr 1905001 T 1 A(0) T(100) C(0) G(0) +chr 1905002 C 1 A(0) T(0) C(100) G(0) +chr 1905003 A 1 A(100) T(0) C(0) G(0) +chr 1905004 A 1 A(100) T(0) C(0) G(0) +chr 1905005 A 1 A(100) T(0) C(0) G(0) +chr 1905006 C 1 A(0) T(0) C(100) G(0) +chr 1905007 T 1 A(0) T(100) C(0) G(0) +chr 1905008 G 1 A(0) T(0) C(0) G(100) +chr 1905009 A 1 A(100) T(0) C(0) G(0) +chr 1905010 T 1 A(0) T(100) C(0) G(0) +chr 1905011 G 1 A(0) T(0) C(0) G(100) +chr 1905012 T 1 A(0) T(100) C(0) G(0) +chr 1905013 C 1 A(0) T(0) C(100) G(0) +chr 1916143 A 1 A(100) T(0) C(0) G(0) +chr 1916144 T 1 A(0) T(100) C(0) G(0) +chr 1916145 G 1 A(0) T(0) C(0) G(100) +chr 1916146 T 1 A(0) T(100) C(0) G(0) +chr 1916147 C 1 A(0) T(0) C(100) G(0) +chr 1916148 C 1 A(0) T(0) C(100) G(0) +chr 1916149 T 1 A(0) T(100) C(0) G(0) +chr 1916150 G 1 A(0) T(0) C(0) G(100) +chr 1916151 A 1 A(100) T(0) C(0) G(0) +chr 1916152 T 1 A(0) T(100) C(0) G(0) +chr 1916153 C 1 A(0) T(0) C(100) G(0) +chr 1916154 G 1 A(0) T(0) C(0) G(100) +chr 1916155 A 1 A(100) T(0) C(0) G(0) +chr 1916156 G 1 A(0) T(0) C(0) G(100) +chr 1916157 C 1 A(0) T(0) C(100) G(0) +chr 1916158 G 1 A(0) T(0) C(0) G(100) +chr 1916159 G 1 A(0) T(0) C(0) G(100) +chr 1916160 C 1 A(0) T(0) C(100) G(0) +chr 1916161 G 1 A(0) T(0) C(0) G(100) +chr 1916162 T 1 A(0) T(100) C(0) G(0) +chr 1916163 T 1 A(0) T(100) C(0) G(0) +chr 1916164 T 1 A(0) T(100) C(0) G(0) +chr 1916165 T 1 A(0) T(100) C(0) G(0) +chr 1916166 A 1 A(100) T(0) C(0) G(0) +chr 1916167 C 1 A(0) T(0) C(100) G(0) +chr 1916168 C 1 A(0) T(0) C(100) G(0) +chr 1916169 G 1 A(0) T(0) C(0) G(100) +chr 1916170 A 1 A(100) T(0) C(0) G(0) +chr 1916171 T 1 A(0) T(0) C(100) G(0) +chr 1916172 C 1 A(0) T(0) C(100) G(0) +chr 2006716 C 1 A(0) T(0) C(100) G(0) +chr 2006717 G 1 A(0) T(0) C(0) G(100) +chr 2006718 G 1 A(0) T(0) C(0) G(100) +chr 2006719 T 1 A(0) T(100) C(0) G(0) +chr 2006720 A 1 A(100) T(0) C(0) G(0) +chr 2006721 T 1 A(0) T(100) C(0) G(0) +chr 2006722 T 1 A(0) T(100) C(0) G(0) +chr 2006723 C 1 A(0) T(0) C(100) G(0) +chr 2006724 C 1 A(0) T(0) C(100) G(0) +chr 2006725 T 1 A(0) T(100) C(0) G(0) +chr 2006726 C 1 A(0) T(0) C(100) G(0) +chr 2006727 A 1 A(100) T(0) C(0) G(0) +chr 2006728 G 1 A(0) T(0) C(0) G(100) +chr 2006729 T 1 A(0) T(100) C(0) G(0) +chr 2006730 T 1 A(0) T(100) C(0) G(0) +chr 2006731 C 1 A(0) T(0) C(100) G(0) +chr 2006732 T 1 A(0) T(100) C(0) G(0) +chr 2006733 C 1 A(0) T(0) C(100) G(0) +chr 2006734 G 1 A(0) T(0) C(0) G(100) +chr 2006735 C 1 A(0) T(0) C(100) G(0) +chr 2006736 T 1 A(0) T(100) C(0) G(0) +chr 2006737 G 1 A(0) T(0) C(0) G(100) +chr 2006738 C 1 A(0) T(0) C(100) G(0) +chr 2006739 A 1 A(100) T(0) C(0) G(0) +chr 2006740 T 1 A(0) T(100) C(0) G(0) +chr 2006741 G 1 A(0) T(0) C(0) G(100) +chr 2006742 C 1 A(0) T(0) C(100) G(0) +chr 2006743 C 1 A(0) T(0) C(100) G(0) +chr 2006744 T 1 A(0) T(100) C(0) G(0) +chr 2006745 G 1 A(0) T(0) C(0) G(100) +chr 2137315 C 1 A(0) T(0) C(100) G(0) +chr 2137316 G 1 A(0) T(0) C(0) G(100) +chr 2137317 C 1 A(0) T(0) C(100) G(0) +chr 2137318 T 1 A(0) T(100) C(0) G(0) +chr 2137319 G 1 A(0) T(0) C(0) G(100) +chr 2137320 G 1 A(0) T(0) C(0) G(100) +chr 2137321 A 1 A(100) T(0) C(0) G(0) +chr 2137322 T 1 A(0) T(100) C(0) G(0) +chr 2137323 G 1 A(0) T(0) C(0) G(100) +chr 2137324 A 1 A(100) T(0) C(0) G(0) +chr 2137325 A 1 A(100) T(0) C(0) G(0) +chr 2137326 A 1 A(100) T(0) C(0) G(0) +chr 2137327 A 1 A(100) T(0) C(0) G(0) +chr 2137329 C 1 A(0) T(0) C(100) G(0) +chr 2137330 G 1 A(0) T(0) C(0) G(100) +chr 2137331 T 1 A(0) T(100) C(0) G(0) +chr 2137332 G 1 A(0) T(0) C(0) G(100) +chr 2137333 A 1 A(100) T(0) C(0) G(0) +chr 2137334 A 1 A(100) T(0) C(0) G(0) +chr 2137335 T 1 A(0) T(100) C(0) G(0) +chr 2137336 A 1 A(100) T(0) C(0) G(0) +chr 2137337 T 1 A(0) T(100) C(0) G(0) +chr 2137338 C 1 A(0) T(0) C(100) G(0) +chr 2137339 A 1 A(100) T(0) C(0) G(0) +chr 2137340 C 1 A(0) T(0) C(100) G(0) +chr 2137341 A 1 A(100) T(0) C(0) G(0) +chr 2137342 C 1 A(0) T(0) C(100) G(0) +chr 2137343 C 1 A(0) T(0) C(100) G(0) +chr 2137344 A 1 A(100) T(0) C(0) G(0) +chr 2250545 T 1 A(0) T(100) C(0) G(0) +chr 2250546 T 1 A(0) T(100) C(0) G(0) +chr 2250547 A 1 A(100) T(0) C(0) G(0) +chr 2250548 T 1 A(0) T(100) C(0) G(0) +chr 2250549 T 1 A(0) T(100) C(0) G(0) +chr 2250550 T 1 A(0) T(100) C(0) G(0) +chr 2250551 G 1 A(0) T(0) C(0) G(100) +chr 2250552 C 1 A(0) T(0) C(100) G(0) +chr 2250553 C 1 A(0) T(0) C(100) G(0) +chr 2250554 C 1 A(0) T(0) C(100) G(0) +chr 2250555 G 1 A(0) T(0) C(0) G(100) +chr 2250556 A 1 A(100) T(0) C(0) G(0) +chr 2250557 T 1 A(0) T(100) C(0) G(0) +chr 2250558 G 1 A(0) T(0) C(0) G(100) +chr 2250559 A 1 A(100) T(0) C(0) G(0) +chr 2250560 G 1 A(0) T(0) C(0) G(100) +chr 2250561 T 1 A(0) T(100) C(0) G(0) +chr 2250562 C 1 A(0) T(0) C(100) G(0) +chr 2250563 A 1 A(100) T(0) C(0) G(0) +chr 2250564 G 1 A(0) T(0) C(0) G(100) +chr 2250565 T 1 A(0) T(100) C(0) G(0) +chr 2250566 T 1 A(0) T(100) C(0) G(0) +chr 2250567 T 1 A(0) T(100) C(0) G(0) +chr 2250568 A 1 A(100) T(0) C(0) G(0) +chr 2250569 T 1 A(0) T(100) C(0) G(0) +chr 2250570 T 1 A(0) T(100) C(0) G(0) +chr 2250571 G 1 A(0) T(0) C(0) G(100) +chr 2250572 C 1 A(0) T(0) C(100) G(0) +chr 2250573 A 1 A(100) T(0) C(0) G(0) +chr 2250574 G 1 A(0) T(0) C(0) G(100) +chr 2263609 C 1 A(0) T(0) C(100) G(0) +chr 2263610 G 1 A(0) T(0) C(0) G(100) +chr 2263611 T 1 A(0) T(100) C(0) G(0) +chr 2263612 A 1 A(100) T(0) C(0) G(0) +chr 2263613 C 1 A(0) T(0) C(100) G(0) +chr 2263614 C 1 A(0) T(0) C(100) G(0) +chr 2263615 G 1 A(0) T(0) C(0) G(100) +chr 2263616 G 1 A(0) T(0) C(0) G(100) +chr 2263617 G 1 A(0) T(0) C(0) G(100) +chr 2263618 C 1 A(0) T(0) C(100) G(0) +chr 2263619 T 1 A(0) T(100) C(0) G(0) +chr 2263620 G 1 A(0) T(0) C(0) G(100) +chr 2263621 A 1 A(100) T(0) C(0) G(0) +chr 2263622 A 1 A(100) T(0) C(0) G(0) +chr 2263623 A 1 A(100) T(0) C(0) G(0) +chr 2263624 G 1 A(0) T(0) C(0) G(100) +chr 2263625 T 1 A(0) T(100) C(0) G(0) +chr 2263626 A 1 A(100) T(0) C(0) G(0) +chr 2263627 G 1 A(0) T(0) C(0) G(100) +chr 2263628 A 1 A(100) T(0) C(0) G(0) +chr 2263629 A 1 A(100) T(0) C(0) G(0) +chr 2263630 G 1 A(0) T(0) C(0) G(100) +chr 2263631 A 1 A(100) T(0) C(0) G(0) +chr 2263632 G 1 A(0) T(0) C(0) G(100) +chr 2263633 C 1 A(0) T(0) C(100) G(0) +chr 2263634 G 1 A(0) T(0) C(0) G(100) +chr 2263635 T 1 A(0) T(100) C(0) G(0) +chr 2263636 T 1 A(0) T(100) C(0) G(0) +chr 2263637 T 1 A(0) T(100) C(0) G(0) +chr 2263638 C 1 A(0) T(0) C(100) G(0) +chr 2359543 G 1 A(0) T(0) C(0) G(100) +chr 2359544 T 1 A(0) T(100) C(0) G(0) +chr 2359545 A 1 A(100) T(0) C(0) G(0) +chr 2359546 T 1 A(0) T(100) C(0) G(0) +chr 2359547 T 1 A(0) T(100) C(0) G(0) +chr 2359548 C 1 A(0) T(0) C(100) G(0) +chr 2359549 T 1 A(0) T(100) C(0) G(0) +chr 2359550 T 1 A(0) T(100) C(0) G(0) +chr 2359551 C 1 A(0) T(0) C(100) G(0) +chr 2359552 A 1 A(100) T(0) C(0) G(0) +chr 2359553 T 1 A(0) T(100) C(0) G(0) +chr 2359554 T 1 A(0) T(100) C(0) G(0) +chr 2359555 G 1 A(0) T(0) C(0) G(100) +chr 2359556 A 1 A(100) T(0) C(0) G(0) +chr 2359557 T 1 A(0) T(100) C(0) G(0) +chr 2359558 T 1 A(0) T(100) C(0) G(0) +chr 2359559 T 1 A(0) T(100) C(0) G(0) +chr 2359560 G 1 A(0) T(0) C(0) G(100) +chr 2359561 T 1 A(0) T(100) C(0) G(0) +chr 2359562 A 1 A(100) T(0) C(0) G(0) +chr 2359563 A 1 A(100) T(0) C(0) G(0) +chr 2359564 G 1 A(0) T(0) C(0) G(100) +chr 2359565 C 1 A(0) T(0) C(100) G(0) +chr 2359566 G 1 A(0) T(0) C(0) G(100) +chr 2359567 G 1 A(0) T(0) C(0) G(100) +chr 2359568 G 1 A(0) T(0) C(0) G(100) +chr 2359569 T 1 A(0) T(100) C(0) G(0) +chr 2359570 A 1 A(100) T(0) C(0) G(0) +chr 2359571 C 1 A(0) T(0) C(100) G(0) +chr 2359572 C 1 A(0) T(0) C(100) G(0) +chr 2480740 T 1 A(0) T(100) C(0) G(0) +chr 2480741 T 1 A(0) T(100) C(0) G(0) +chr 2480742 T 1 A(0) T(100) C(0) G(0) +chr 2480743 A 1 A(100) T(0) C(0) G(0) +chr 2480744 A 1 A(100) T(0) C(0) G(0) +chr 2480745 G 1 A(0) T(0) C(0) G(100) +chr 2480746 C 1 A(0) T(0) C(100) G(0) +chr 2480747 G 1 A(0) T(0) C(0) G(100) +chr 2480748 C 1 A(0) T(0) C(100) G(0) +chr 2480749 C 1 A(0) T(0) C(100) G(0) +chr 2480750 A 1 A(100) T(0) C(0) G(0) +chr 2480751 A 1 A(100) T(0) C(0) G(0) +chr 2480752 C 1 A(0) T(0) C(100) G(0) +chr 2480753 C 1 A(0) T(0) C(100) G(0) +chr 2480754 A 1 A(100) T(0) C(0) G(0) +chr 2480755 G 1 A(0) T(0) C(0) G(100) +chr 2480756 G 1 A(0) T(0) C(0) G(100) +chr 2480757 C 1 A(0) T(0) C(100) G(0) +chr 2480758 T 1 A(0) T(100) C(0) G(0) +chr 2480759 T 1 A(0) T(100) C(0) G(0) +chr 2480760 C 1 A(0) T(0) C(100) G(0) +chr 2480761 T 1 A(0) T(100) C(0) G(0) +chr 2480762 T 1 A(0) T(100) C(0) G(0) +chr 2480763 T 1 A(0) T(100) C(0) G(0) +chr 2480764 A 1 A(0) T(0) C(0) G(100) +chr 2480765 G 1 A(0) T(0) C(0) G(100) +chr 2480766 T 1 A(0) T(100) C(0) G(0) +chr 2480767 T 1 A(0) T(100) C(0) G(0) +chr 2480768 G 1 A(0) T(0) C(0) G(100) +chr 2480769 C 1 A(0) T(0) C(100) G(0) +chr 2506977 T 1 A(0) T(100) C(0) G(0) +chr 2506978 T 1 A(0) T(100) C(0) G(0) +chr 2506979 C 1 A(0) T(0) C(100) G(0) +chr 2506980 G 1 A(0) T(0) C(0) G(100) +chr 2506981 C 1 A(0) T(0) C(100) G(0) +chr 2506982 C 1 A(0) T(0) C(100) G(0) +chr 2506983 T 1 A(0) T(0) C(100) G(0) +chr 2506984 G 1 A(0) T(0) C(0) G(100) +chr 2506985 G 1 A(0) T(0) C(0) G(100) +chr 2506986 C 1 A(0) T(0) C(100) G(0) +chr 2506987 A 1 A(100) T(0) C(0) G(0) +chr 2506988 A 1 A(100) T(0) C(0) G(0) +chr 2506989 G 1 A(0) T(0) C(0) G(100) +chr 2506990 C 1 A(0) T(0) C(100) G(0) +chr 2506991 T 1 A(0) T(100) C(0) G(0) +chr 2506992 T 1 A(0) T(100) C(0) G(0) +chr 2506993 A 1 A(100) T(0) C(0) G(0) +chr 2506994 C 1 A(0) T(0) C(100) G(0) +chr 2506995 C 1 A(0) T(0) C(100) G(0) +chr 2506996 C 1 A(0) T(0) C(100) G(0) +chr 2506997 A 1 A(100) T(0) C(0) G(0) +chr 2506998 A 1 A(100) T(0) C(0) G(0) +chr 2506999 C 1 A(0) T(0) C(100) G(0) +chr 2507000 G 1 A(0) T(0) C(0) G(100) +chr 2507001 C 1 A(0) T(0) C(100) G(0) +chr 2507002 T 1 A(0) T(100) C(0) G(0) +chr 2507003 T 1 A(0) T(100) C(0) G(0) +chr 2507004 A 1 A(100) T(0) C(0) G(0) +chr 2507005 T 1 A(0) T(100) C(0) G(0) +chr 2507006 C 1 A(0) T(0) C(100) G(0) +chr 2665584 C 1 A(0) T(0) C(100) G(0) +chr 2665585 A 1 A(100) T(0) C(0) G(0) +chr 2665586 C 1 A(0) T(0) C(100) G(0) +chr 2665587 G 1 A(0) T(0) C(0) G(100) +chr 2665588 C 1 A(0) T(0) C(100) G(0) +chr 2665589 T 1 A(0) T(100) C(0) G(0) +chr 2665590 A 1 A(100) T(0) C(0) G(0) +chr 2665591 C 1 A(0) T(0) C(100) G(0) +chr 2665592 G 1 A(0) T(0) C(0) G(100) +chr 2665593 T 1 A(0) T(100) C(0) G(0) +chr 2665594 G 1 A(0) T(0) C(0) G(100) +chr 2665595 C 1 A(0) T(0) C(100) G(0) +chr 2665596 G 1 A(0) T(0) C(0) G(100) +chr 2665597 C 1 A(0) T(0) C(100) G(0) +chr 2665598 C 1 A(0) T(0) C(100) G(0) +chr 2665599 C 1 A(0) T(0) C(100) G(0) +chr 2665600 C 1 A(0) T(0) C(100) G(0) +chr 2665601 C 1 A(0) T(0) C(100) G(0) +chr 2665602 G 1 A(0) T(0) C(0) G(100) +chr 2665603 C 1 A(0) T(0) C(100) G(0) +chr 2665604 C 1 A(0) T(0) C(100) G(0) +chr 2665605 C 1 A(0) T(0) C(100) G(0) +chr 2665606 A 1 A(100) T(0) C(0) G(0) +chr 2665607 G 1 A(0) T(0) C(0) G(100) +chr 2665608 A 1 A(100) T(0) C(0) G(0) +chr 2665609 A 1 A(100) T(0) C(0) G(0) +chr 2665610 G 1 A(0) T(0) C(0) G(100) +chr 2665611 G 1 A(0) T(0) C(0) G(100) +chr 2665612 C 1 A(0) T(0) C(100) G(0) +chr 2665613 G 1 A(0) T(0) C(0) G(100) +chr 2724848 T 1 A(0) T(100) C(0) G(0) +chr 2724849 C 1 A(0) T(0) C(100) G(0) +chr 2724850 A 1 A(100) T(0) C(0) G(0) +chr 2724851 C 1 A(0) T(0) C(100) G(0) +chr 2724852 G 1 A(0) T(0) C(0) G(100) +chr 2724853 C 1 A(0) T(0) C(100) G(0) +chr 2724854 T 1 A(0) T(100) C(0) G(0) +chr 2724855 C 1 A(0) T(0) C(100) G(0) +chr 2724856 G 1 A(0) T(0) C(0) G(100) +chr 2724857 C 1 A(0) T(0) C(100) G(0) +chr 2724858 A 1 A(100) T(0) C(0) G(0) +chr 2724859 G 1 A(0) T(0) C(0) G(100) +chr 2724860 T 1 A(0) T(100) C(0) G(0) +chr 2724861 C 1 A(0) T(0) C(100) G(0) +chr 2724862 A 1 A(100) T(0) C(0) G(0) +chr 2724863 A 1 A(100) T(0) C(0) G(0) +chr 2724864 G 1 A(0) T(0) C(0) G(100) +chr 2724865 C 1 A(0) T(0) C(100) G(0) +chr 2724866 T 1 A(0) T(100) C(0) G(0) +chr 2724867 G 1 A(0) T(0) C(0) G(100) +chr 2724868 G 1 A(0) T(0) C(0) G(100) +chr 2724869 C 1 A(0) T(0) C(100) G(0) +chr 2724870 T 1 A(0) T(100) C(0) G(0) +chr 2724871 T 1 A(0) T(100) C(0) G(0) +chr 2724872 A 1 A(100) T(0) C(0) G(0) +chr 2724873 T 1 A(0) T(100) C(0) G(0) +chr 2724874 G 1 A(0) T(0) C(0) G(100) +chr 2724875 C 1 A(0) T(0) C(100) G(0) +chr 2724876 C 1 A(0) T(0) C(100) G(0) +chr 2724877 A 1 A(100) T(0) C(0) G(0) +chr 2777224 T 1 A(0) T(100) C(0) G(0) +chr 2777225 T 1 A(0) T(100) C(0) G(0) +chr 2777226 G 1 A(0) T(0) C(0) G(100) +chr 2777227 C 1 A(0) T(0) C(100) G(0) +chr 2777228 T 1 A(0) T(100) C(0) G(0) +chr 2777229 G 1 A(0) T(0) C(0) G(100) +chr 2777230 T 1 A(0) T(100) C(0) G(0) +chr 2777231 T 1 A(0) T(100) C(0) G(0) +chr 2777232 G 1 A(0) T(0) C(0) G(100) +chr 2777233 C 1 A(0) T(0) C(100) G(0) +chr 2777234 C 1 A(0) T(0) C(100) G(0) +chr 2777235 G 1 A(100) T(0) C(0) G(0) +chr 2777236 T 1 A(0) T(100) C(0) G(0) +chr 2777237 C 1 A(0) T(0) C(100) G(0) +chr 2777238 A 1 A(0) T(0) C(0) G(100) +chr 2777239 C 1 A(0) T(0) C(100) G(0) +chr 2777240 T 1 A(0) T(100) C(0) G(0) +chr 2777241 T 1 A(0) T(100) C(0) G(0) +chr 2777242 T 1 A(0) T(100) C(0) G(0) +chr 2777243 T 1 A(0) T(100) C(0) G(0) +chr 2777244 C 1 A(0) T(0) C(100) G(0) +chr 2777245 A 1 A(100) T(0) C(0) G(0) +chr 2777246 G 1 A(0) T(0) C(0) G(100) +chr 2777247 G 1 A(0) T(0) C(0) G(100) +chr 2777248 A 1 A(100) T(0) C(0) G(0) +chr 2777249 C 1 A(0) T(0) C(100) G(0) +chr 2777250 A 1 A(100) T(0) C(0) G(0) +chr 2777251 T 1 A(0) T(100) C(0) G(0) +chr 2777252 A 1 A(100) T(0) C(0) G(0) +chr 2777253 C 1 A(0) T(0) C(100) G(0) +chr 2779110 T 1 A(0) T(100) C(0) G(0) +chr 2779111 G 1 A(0) T(0) C(0) G(100) +chr 2779112 C 1 A(0) T(0) C(100) G(0) +chr 2779113 G 1 A(0) T(0) C(0) G(100) +chr 2779114 C 1 A(0) T(0) C(100) G(0) +chr 2779115 C 1 A(0) T(0) C(100) G(0) +chr 2779116 G 1 A(0) T(0) C(0) G(100) +chr 2779117 C 1 A(0) T(0) C(100) G(0) +chr 2779118 C 1 A(0) T(0) C(100) G(0) +chr 2779119 G 1 A(0) T(0) C(0) G(100) +chr 2779120 G 1 A(0) T(0) C(0) G(100) +chr 2779121 A 1 A(100) T(0) C(0) G(0) +chr 2779122 T 1 A(0) T(100) C(0) G(0) +chr 2779123 T 1 A(0) T(100) C(0) G(0) +chr 2779124 G 1 A(0) T(0) C(0) G(100) +chr 2779125 T 1 A(0) T(100) C(0) G(0) +chr 2779126 T 1 A(0) T(100) C(0) G(0) +chr 2779127 G 1 A(0) T(0) C(0) G(100) +chr 2779128 C 1 A(0) T(0) C(100) G(0) +chr 2779129 T 1 A(0) T(100) C(0) G(0) +chr 2779130 C 1 A(0) T(0) C(100) G(0) +chr 2779131 A 1 A(100) T(0) C(0) G(0) +chr 2779132 A 1 A(100) T(0) C(0) G(0) +chr 2779133 C 1 A(0) T(0) C(100) G(0) +chr 2779134 A 1 A(100) T(0) C(0) G(0) +chr 2779135 T 1 A(0) T(100) C(0) G(0) +chr 2779136 G 1 A(0) T(0) C(0) G(100) +chr 2779137 C 1 A(0) T(0) C(100) G(0) +chr 2779138 T 1 A(0) T(100) C(0) G(0) +chr 2779139 T 1 A(0) T(100) C(0) G(0) +chr 2807120 C 1 A(0) T(0) C(100) G(0) +chr 2807121 T 1 A(0) T(100) C(0) G(0) +chr 2807122 C 1 A(0) T(0) C(100) G(0) +chr 2807123 G 1 A(0) T(0) C(0) G(100) +chr 2807124 T 1 A(0) T(100) C(0) G(0) +chr 2807125 C 1 A(0) T(0) C(100) G(0) +chr 2807126 C 1 A(0) T(0) C(100) G(0) +chr 2807127 G 1 A(0) T(0) C(0) G(100) +chr 2807128 G 1 A(0) T(0) C(0) G(100) +chr 2807129 C 1 A(0) T(0) C(100) G(0) +chr 2807130 G 1 A(0) T(0) C(0) G(100) +chr 2807131 G 1 A(0) T(0) C(0) G(100) +chr 2807132 G 1 A(0) T(0) C(0) G(100) +chr 2807133 C 1 A(0) T(0) C(100) G(0) +chr 2807134 G 1 A(0) T(0) C(0) G(100) +chr 2807135 G 1 A(0) T(0) C(0) G(100) +chr 2807136 T 1 A(0) T(100) C(0) G(0) +chr 2807137 T 1 A(0) T(100) C(0) G(0) +chr 2807138 T 1 A(0) T(100) C(0) G(0) +chr 2807139 T 1 A(0) T(100) C(0) G(0) +chr 2807140 G 1 A(0) T(0) C(0) G(100) +chr 2807141 C 1 A(0) T(0) C(100) G(0) +chr 2807142 C 1 A(0) T(0) C(100) G(0) +chr 2807143 G 1 A(0) T(0) C(0) G(100) +chr 2807144 A 1 A(100) T(0) C(0) G(0) +chr 2807145 T 1 A(0) T(0) C(100) G(0) +chr 2807146 A 1 A(100) T(0) C(0) G(0) +chr 2807147 A 1 A(100) T(0) C(0) G(0) +chr 2807148 G 1 A(0) T(0) C(0) G(100) +chr 2807149 G 1 A(0) T(0) C(0) G(100) +chr 2811982 A 1 A(100) T(0) C(0) G(0) +chr 2811983 A 1 A(100) T(0) C(0) G(0) +chr 2811984 C 1 A(0) T(0) C(100) G(0) +chr 2811985 T 1 A(0) T(100) C(0) G(0) +chr 2811986 G 1 A(0) T(0) C(0) G(100) +chr 2811987 G 1 A(0) T(0) C(0) G(100) +chr 2811988 A 1 A(100) T(0) C(0) G(0) +chr 2811989 A 1 A(100) T(0) C(0) G(0) +chr 2811990 G 1 A(0) T(0) C(0) G(100) +chr 2811991 G 1 A(0) T(0) C(0) G(100) +chr 2811992 G 1 A(0) T(0) C(0) G(100) +chr 2811993 C 1 A(0) T(0) C(100) G(0) +chr 2811994 T 1 A(0) T(100) C(0) G(0) +chr 2811995 T 1 A(0) T(100) C(0) G(0) +chr 2811996 G 1 A(0) T(0) C(0) G(100) +chr 2811997 G 1 A(0) T(0) C(0) G(100) +chr 2811998 G 1 A(0) T(0) C(0) G(100) +chr 2811999 A 1 A(100) T(0) C(0) G(0) +chr 2812000 T 1 A(0) T(100) C(0) G(0) +chr 2812001 G 1 A(0) T(0) C(0) G(100) +chr 2812002 A 1 A(100) T(0) C(0) G(0) +chr 2812003 C 1 A(0) T(0) C(100) G(0) +chr 2812004 G 1 A(100) T(0) C(0) G(0) +chr 2812005 C 1 A(0) T(0) C(100) G(0) +chr 2812006 A 1 A(100) T(0) C(0) G(0) +chr 2812007 A 1 A(100) T(0) C(0) G(0) +chr 2812008 C 1 A(0) T(0) C(100) G(0) +chr 2812009 A 1 A(100) T(0) C(0) G(0) +chr 2812010 G 1 A(0) T(0) C(0) G(100) +chr 2812011 C 1 A(0) T(0) C(100) G(0) +chr 2893756 T 1 A(0) T(100) C(0) G(0) +chr 2893757 A 1 A(100) T(0) C(0) G(0) +chr 2893758 T 1 A(100) T(0) C(0) G(0) +chr 2893759 T 1 A(0) T(100) C(0) G(0) +chr 2893760 G 1 A(0) T(0) C(0) G(100) +chr 2893761 C 1 A(0) T(0) C(100) G(0) +chr 2893762 G 1 A(0) T(0) C(0) G(100) +chr 2893763 G 1 A(0) T(0) C(0) G(100) +chr 2893764 C 1 A(0) T(0) C(100) G(0) +chr 2893765 A 1 A(100) T(0) C(0) G(0) +chr 2893766 T 1 A(0) T(100) C(0) G(0) +chr 2893767 T 1 A(0) T(100) C(0) G(0) +chr 2893768 C 1 A(0) T(0) C(100) G(0) +chr 2893769 T 1 A(0) T(100) C(0) G(0) +chr 2893770 C 1 A(0) T(0) C(100) G(0) +chr 2893771 C 1 A(0) T(0) C(100) G(0) +chr 2893772 T 1 A(0) T(100) C(0) G(0) +chr 2893773 G 1 A(0) T(0) C(0) G(100) +chr 2893774 A 1 A(100) T(0) C(0) G(0) +chr 2893775 T 1 A(0) T(100) C(0) G(0) +chr 2893776 T 1 A(0) T(100) C(0) G(0) +chr 2893777 T 1 A(0) T(100) C(0) G(0) +chr 2893778 A 1 A(100) T(0) C(0) G(0) +chr 2893779 T 1 A(0) T(100) C(0) G(0) +chr 2893780 T 1 A(0) T(100) C(0) G(0) +chr 2893781 G 1 A(0) T(0) C(0) G(100) +chr 2893782 T 1 A(0) T(100) C(0) G(0) +chr 2893783 C 1 A(0) T(0) C(100) G(0) +chr 2893784 A 1 A(100) T(0) C(0) G(0) +chr 2893785 C 1 A(0) T(0) C(100) G(0) +chr 2906502 T 1 A(0) T(100) C(0) G(0) +chr 2906503 G 1 A(0) T(0) C(0) G(100) +chr 2906504 T 1 A(0) T(100) C(0) G(0) +chr 2906505 T 1 A(0) T(100) C(0) G(0) +chr 2906506 G 1 A(0) T(0) C(0) G(100) +chr 2906507 G 1 A(0) T(0) C(0) G(100) +chr 2906508 C 1 A(0) T(0) C(100) G(0) +chr 2906509 A 1 A(100) T(0) C(0) G(0) +chr 2906510 A 1 A(100) T(0) C(0) G(0) +chr 2906511 C 1 A(0) T(0) C(100) G(0) +chr 2906512 A 1 A(100) T(0) C(0) G(0) +chr 2906513 T 1 A(0) T(100) C(0) G(0) +chr 2906514 G 1 A(0) T(0) C(0) G(100) +chr 2906515 G 1 A(0) T(0) C(0) G(100) +chr 2906516 C 1 A(0) T(0) C(100) G(0) +chr 2906517 G 1 A(0) T(0) C(0) G(100) +chr 2906518 A 1 A(100) T(0) C(0) G(0) +chr 2906519 G 1 A(0) T(0) C(0) G(100) +chr 2906520 C 1 A(0) T(0) C(100) G(0) +chr 2906521 G 1 A(0) T(0) C(0) G(100) +chr 2906522 T 1 A(0) T(100) C(0) G(0) +chr 2906523 A 1 A(100) T(0) C(0) G(0) +chr 2906524 A 1 A(100) T(0) C(0) G(0) +chr 2906525 T 1 A(0) T(100) C(0) G(0) +chr 2906526 C 1 A(0) T(0) C(100) G(0) +chr 2906527 A 1 A(100) T(0) C(0) G(0) +chr 2906528 A 1 A(100) T(0) C(0) G(0) +chr 2906529 T 1 A(0) T(100) C(0) G(0) +chr 2906530 T 1 A(0) T(100) C(0) G(0) +chr 2906531 A 1 A(100) T(0) C(0) G(0) +chr 3154209 T 1 A(0) T(100) C(0) G(0) +chr 3154210 C 1 A(0) T(0) C(100) G(0) +chr 3154211 T 1 A(0) T(100) C(0) G(0) +chr 3154212 G 1 A(0) T(0) C(0) G(100) +chr 3154213 G 1 A(0) T(0) C(0) G(100) +chr 3154214 A 1 A(100) T(0) C(0) G(0) +chr 3154215 T 1 A(0) T(100) C(0) G(0) +chr 3154216 C 1 A(0) T(0) C(100) G(0) +chr 3154217 A 1 A(100) T(0) C(0) G(0) +chr 3154218 C 1 A(0) T(0) C(100) G(0) +chr 3154219 G 1 A(0) T(0) C(0) G(100) +chr 3154220 C 1 A(0) T(0) C(100) G(0) +chr 3154221 G 1 A(0) T(0) C(0) G(100) +chr 3154222 C 1 A(0) T(0) C(100) G(0) +chr 3154223 A 1 A(100) T(0) C(0) G(0) +chr 3154224 A 1 A(100) T(0) C(0) G(0) +chr 3154225 A 1 A(100) T(0) C(0) G(0) +chr 3154226 C 1 A(0) T(0) C(100) G(0) +chr 3154227 A 1 A(100) T(0) C(0) G(0) +chr 3154228 C 1 A(0) T(0) C(100) G(0) +chr 3154229 T 1 A(0) T(100) C(0) G(0) +chr 3154230 G 1 A(0) T(0) C(0) G(100) +chr 3154231 G 1 A(0) T(0) C(0) G(100) +chr 3154232 C 1 A(0) T(0) C(100) G(0) +chr 3154233 T 1 A(0) T(100) C(0) G(0) +chr 3154234 A 1 A(100) T(0) C(0) G(0) +chr 3154235 T 1 A(0) T(100) C(0) G(0) +chr 3154236 C 1 A(0) T(0) C(100) G(0) +chr 3154237 G 1 A(0) T(0) C(0) G(100) +chr 3154238 T 1 A(0) T(100) C(0) G(0) +chr 3218070 G 1 A(0) T(0) C(0) G(100) +chr 3218071 G 1 A(0) T(0) C(0) G(100) +chr 3218072 C 1 A(0) T(0) C(100) G(0) +chr 3218073 G 1 A(0) T(0) C(0) G(100) +chr 3218074 C 1 A(0) T(0) C(100) G(0) +chr 3218075 G 1 A(0) T(0) C(0) G(100) +chr 3218076 C 1 A(0) T(0) C(100) G(0) +chr 3218077 T 1 A(0) T(100) C(0) G(0) +chr 3218078 G 1 A(0) T(0) C(0) G(100) +chr 3218079 T 1 A(0) T(100) C(0) G(0) +chr 3218080 C 1 A(0) T(0) C(100) G(0) +chr 3218081 G 1 A(0) T(0) C(0) G(100) +chr 3218082 G 1 A(0) T(0) C(0) G(100) +chr 3218083 C 1 A(0) T(0) C(100) G(0) +chr 3218084 C 1 A(0) T(0) C(100) G(0) +chr 3218085 A 1 A(100) T(0) C(0) G(0) +chr 3218086 C 1 A(0) T(0) C(100) G(0) +chr 3218087 G 1 A(0) T(0) C(0) G(100) +chr 3218088 G 1 A(0) T(0) C(0) G(100) +chr 3218089 C 1 A(0) T(0) C(100) G(0) +chr 3218090 G 1 A(0) T(0) C(0) G(100) +chr 3218091 A 1 A(100) T(0) C(0) G(0) +chr 3218092 A 1 A(100) T(0) C(0) G(0) +chr 3218093 A 1 A(100) T(0) C(0) G(0) +chr 3218094 T 1 A(0) T(100) C(0) G(0) +chr 3218095 C 1 A(0) T(0) C(100) G(0) +chr 3218096 G 1 A(0) T(0) C(0) G(100) +chr 3218097 A 1 A(100) T(0) C(0) G(0) +chr 3218098 C 1 A(0) T(0) C(100) G(0) +chr 3218099 C 1 A(0) T(0) C(100) G(0) +chr 3279675 T 1 A(0) T(100) C(0) G(0) +chr 3279676 C 1 A(0) T(0) C(100) G(0) +chr 3279677 C 1 A(0) T(0) C(100) G(0) +chr 3279678 C 1 A(0) T(0) C(100) G(0) +chr 3279679 C 1 A(0) T(0) C(100) G(0) +chr 3279680 C 1 A(0) T(0) C(100) G(0) +chr 3279681 G 1 A(0) T(0) C(0) G(100) +chr 3279682 T 1 A(0) T(100) C(0) G(0) +chr 3279683 A 1 A(100) T(0) C(0) G(0) +chr 3279684 A 1 A(100) T(0) C(0) G(0) +chr 3279685 G 1 A(0) T(0) C(0) G(100) +chr 3279686 G 1 A(0) T(0) C(0) G(100) +chr 3279687 C 1 A(0) T(0) C(100) G(0) +chr 3279688 C 1 A(0) T(0) C(100) G(0) +chr 3279689 T 1 A(0) T(100) C(0) G(0) +chr 3279690 T 1 A(0) T(100) C(0) G(0) +chr 3279691 T 1 A(0) T(100) C(0) G(0) +chr 3279692 C 1 A(0) T(0) C(100) G(0) +chr 3279693 T 1 A(0) T(100) C(0) G(0) +chr 3279694 T 1 A(0) T(100) C(0) G(0) +chr 3279695 T 1 A(0) T(100) C(0) G(0) +chr 3279696 T 1 A(0) T(100) C(0) G(0) +chr 3279697 T 1 A(0) T(100) C(0) G(0) +chr 3279698 C 1 A(0) T(0) C(100) G(0) +chr 3279699 T 1 A(0) T(100) C(0) G(0) +chr 3279700 T 1 A(0) T(100) C(0) G(0) +chr 3279701 T 1 A(0) T(100) C(0) G(0) +chr 3279702 C 1 A(0) T(0) C(100) G(0) +chr 3279703 G 1 A(0) T(0) C(0) G(100) +chr 3279704 T 1 A(0) T(100) C(0) G(0) +chr 3289283 T 1 A(0) T(100) C(0) G(0) +chr 3289284 T 1 A(0) T(100) C(0) G(0) +chr 3289285 T 1 A(0) T(100) C(0) G(0) +chr 3289286 G 1 A(0) T(0) C(0) G(100) +chr 3289287 C 1 A(0) T(0) C(100) G(0) +chr 3289288 T 1 A(0) T(100) C(0) G(0) +chr 3289289 T 1 A(0) T(100) C(0) G(0) +chr 3289290 T 1 A(0) T(100) C(0) G(0) +chr 3289291 C 1 A(0) T(100) C(0) G(0) +chr 3289292 A 1 A(100) T(0) C(0) G(0) +chr 3289293 G 1 A(0) T(0) C(0) G(100) +chr 3289294 T 1 A(0) T(100) C(0) G(0) +chr 3289295 A 1 A(100) T(0) C(0) G(0) +chr 3289296 C 1 A(0) T(0) C(100) G(0) +chr 3289297 A 1 A(100) T(0) C(0) G(0) +chr 3289298 C 1 A(0) T(0) C(100) G(0) +chr 3289299 C 1 A(0) T(0) C(100) G(0) +chr 3289300 G 1 A(0) T(0) C(0) G(100) +chr 3289301 G 1 A(0) T(0) C(0) G(100) +chr 3289302 A 1 A(100) T(0) C(0) G(0) +chr 3289303 T 1 A(0) T(100) C(0) G(0) +chr 3289304 T 1 A(0) T(100) C(0) G(0) +chr 3289305 C 1 A(0) T(0) C(100) G(0) +chr 3289306 A 1 A(100) T(0) C(0) G(0) +chr 3289307 G 1 A(0) T(0) C(0) G(100) +chr 3289308 A 1 A(100) T(0) C(0) G(0) +chr 3289309 A 1 A(100) T(0) C(0) G(0) +chr 3289310 C 1 A(0) T(0) C(100) G(0) +chr 3289311 C 1 A(0) T(0) C(100) G(0) +chr 3304453 G 1 A(0) T(0) C(0) G(100) +chr 3304454 C 1 A(0) T(0) C(100) G(0) +chr 3304455 G 1 A(0) T(0) C(0) G(100) +chr 3304456 G 1 A(0) T(0) C(0) G(100) +chr 3304457 A 1 A(100) T(0) C(0) G(0) +chr 3304458 C 1 A(0) T(0) C(100) G(0) +chr 3304459 G 1 A(0) T(0) C(0) G(100) +chr 3304460 A 1 A(100) T(0) C(0) G(0) +chr 3304461 T 1 A(0) T(100) C(0) G(0) +chr 3304462 C 1 A(0) T(0) C(100) G(0) +chr 3304463 T 1 A(0) T(100) C(0) G(0) +chr 3304464 T 1 A(0) T(100) C(0) G(0) +chr 3304465 C 1 A(0) T(0) C(100) G(0) +chr 3304466 A 1 A(100) T(0) C(0) G(0) +chr 3304467 C 1 A(0) T(0) C(100) G(0) +chr 3304468 G 1 A(0) T(0) C(0) G(100) +chr 3304469 G 1 A(0) T(0) C(0) G(100) +chr 3304470 T 1 A(0) T(100) C(0) G(0) +chr 3304471 C 1 A(0) T(0) C(100) G(0) +chr 3304472 A 1 A(0) T(0) C(0) G(100) +chr 3304473 C 1 A(0) T(0) C(100) G(0) +chr 3304474 C 1 A(0) T(0) C(100) G(0) +chr 3304475 A 1 A(100) T(0) C(0) G(0) +chr 3304476 C 1 A(0) T(0) C(100) G(0) +chr 3304477 G 1 A(0) T(0) C(0) G(100) +chr 3304478 C 1 A(0) T(0) C(100) G(0) +chr 3304479 G 1 A(0) T(0) C(0) G(100) +chr 3304480 G 1 A(0) T(0) C(0) G(100) +chr 3304481 G 1 A(100) T(0) C(0) G(0) +chr 3304482 C 1 A(0) T(0) C(100) G(0) +chr 3330950 T 1 A(0) T(100) C(0) G(0) +chr 3330951 C 1 A(0) T(0) C(100) G(0) +chr 3330952 T 1 A(0) T(100) C(0) G(0) +chr 3330953 G 1 A(0) T(0) C(0) G(100) +chr 3330954 C 1 A(0) T(0) C(100) G(0) +chr 3330955 T 1 A(0) T(100) C(0) G(0) +chr 3330956 T 1 A(0) T(100) C(0) G(0) +chr 3330957 T 1 A(0) T(100) C(0) G(0) +chr 3330958 A 1 A(100) T(0) C(0) G(0) +chr 3330959 G 1 A(0) T(0) C(0) G(100) +chr 3330960 C 1 A(0) T(0) C(100) G(0) +chr 3330961 A 1 A(100) T(0) C(0) G(0) +chr 3330962 A 1 A(100) T(0) C(0) G(0) +chr 3330963 A 1 A(100) T(0) C(0) G(0) +chr 3330964 C 1 A(0) T(0) C(100) G(0) +chr 3330965 A 1 A(100) T(0) C(0) G(0) +chr 3330966 G 1 A(0) T(0) C(0) G(100) +chr 3330967 A 1 A(100) T(0) C(0) G(0) +chr 3330968 G 1 A(0) T(0) C(0) G(100) +chr 3330969 T 1 A(0) T(100) C(0) G(0) +chr 3330970 G 1 A(0) T(0) C(0) G(100) +chr 3330971 T 1 A(0) T(100) C(0) G(0) +chr 3330972 G 1 A(0) T(0) C(0) G(100) +chr 3330973 G 1 A(0) T(0) C(0) G(100) +chr 3330974 T 1 A(0) T(100) C(0) G(0) +chr 3330975 C 1 A(0) T(0) C(100) G(0) +chr 3330976 A 1 A(100) T(0) C(0) G(0) +chr 3330977 C 1 A(0) T(0) C(100) G(0) +chr 3330978 G 1 A(0) T(0) C(0) G(100) +chr 3330979 A 1 A(100) T(0) C(0) G(0) +chr 3341305 C 1 A(0) T(0) C(100) G(0) +chr 3341306 G 1 A(0) T(0) C(0) G(100) +chr 3341307 T 1 A(0) T(100) C(0) G(0) +chr 3341308 T 1 A(0) T(100) C(0) G(0) +chr 3341309 A 1 A(100) T(0) C(0) G(0) +chr 3341310 T 1 A(0) T(100) C(0) G(0) +chr 3341311 A 1 A(100) T(0) C(0) G(0) +chr 3341312 C 1 A(0) T(0) C(100) G(0) +chr 3341313 G 1 A(0) T(0) C(0) G(100) +chr 3341314 G 1 A(0) T(0) C(0) G(100) +chr 3341315 A 1 A(100) T(0) C(0) G(0) +chr 3341316 A 1 A(100) T(0) C(0) G(0) +chr 3341317 C 1 A(0) T(0) C(100) G(0) +chr 3341318 A 1 A(100) T(0) C(0) G(0) +chr 3341319 A 1 A(100) T(0) C(0) G(0) +chr 3341320 C 1 A(0) T(0) C(100) G(0) +chr 3341321 A 1 A(100) T(0) C(0) G(0) +chr 3341322 T 1 A(0) T(100) C(0) G(0) +chr 3341323 T 1 A(0) T(100) C(0) G(0) +chr 3341324 T 1 A(0) T(100) C(0) G(0) +chr 3341325 A 1 A(100) T(0) C(0) G(0) +chr 3341326 A 1 A(100) T(0) C(0) G(0) +chr 3341327 C 1 A(0) T(0) C(100) G(0) +chr 3341328 T 1 A(0) T(100) C(0) G(0) +chr 3341329 C 1 A(0) T(0) C(100) G(0) +chr 3341330 C 1 A(0) T(0) C(100) G(0) +chr 3341331 A 1 A(100) T(0) C(0) G(0) +chr 3341332 G 1 A(0) T(0) C(0) G(100) +chr 3341333 C 1 A(0) T(0) C(100) G(0) +chr 3341334 G 1 A(0) T(0) C(0) G(100) +chr 3375780 A 1 A(100) T(0) C(0) G(0) +chr 3375781 A 1 A(100) T(0) C(0) G(0) +chr 3375782 A 1 A(100) T(0) C(0) G(0) +chr 3375783 A 1 A(100) T(0) C(0) G(0) +chr 3375784 C 1 A(0) T(0) C(100) G(0) +chr 3375785 C 1 A(0) T(0) C(100) G(0) +chr 3375786 C 1 A(0) T(0) C(100) G(0) +chr 3375787 G 1 A(0) T(0) C(0) G(100) +chr 3375788 C 1 A(0) T(0) C(100) G(0) +chr 3375789 C 1 A(0) T(0) C(100) G(0) +chr 3375790 G 1 A(0) T(0) C(0) G(100) +chr 3375791 A 1 A(100) T(0) C(0) G(0) +chr 3375792 A 1 A(100) T(0) C(0) G(0) +chr 3375793 G 1 A(0) T(0) C(0) G(100) +chr 3375794 C 1 A(0) T(0) C(100) G(0) +chr 3375795 G 1 A(0) T(0) C(0) G(100) +chr 3375796 G 1 A(0) T(0) C(0) G(100) +chr 3375797 G 1 A(0) T(0) C(0) G(100) +chr 3375798 T 1 A(0) T(100) C(0) G(0) +chr 3375799 T 1 A(0) T(100) C(0) G(0) +chr 3422447 T 1 A(0) T(100) C(0) G(0) +chr 3422448 C 1 A(0) T(0) C(100) G(0) +chr 3422449 A 1 A(100) T(0) C(0) G(0) +chr 3422450 C 1 A(0) T(0) C(100) G(0) +chr 3422451 G 1 A(0) T(0) C(0) G(100) +chr 3422452 C 1 A(0) T(0) C(100) G(0) +chr 3422453 T 1 A(0) T(100) C(0) G(0) +chr 3422454 C 1 A(0) T(0) C(100) G(0) +chr 3422455 G 1 A(0) T(0) C(0) G(100) +chr 3422456 C 1 A(0) T(0) C(100) G(0) +chr 3422457 A 1 A(100) T(0) C(0) G(0) +chr 3422458 G 1 A(0) T(0) C(0) G(100) +chr 3422459 T 1 A(0) T(100) C(0) G(0) +chr 3422460 C 1 A(0) T(0) C(100) G(0) +chr 3422461 A 1 A(100) T(0) C(0) G(0) +chr 3422462 A 1 A(100) T(0) C(0) G(0) +chr 3422463 G 1 A(0) T(0) C(0) G(100) +chr 3422464 C 1 A(0) T(0) C(100) G(0) +chr 3422465 T 1 A(0) T(100) C(0) G(0) +chr 3422466 G 1 A(0) T(0) C(0) G(100) +chr 3422467 G 1 A(0) T(0) C(0) G(100) +chr 3422468 C 1 A(0) T(0) C(100) G(0) +chr 3422469 T 1 A(0) T(100) C(0) G(0) +chr 3422470 T 1 A(0) T(100) C(0) G(0) +chr 3422471 A 1 A(100) T(0) C(0) G(0) +chr 3422472 T 1 A(0) T(100) C(0) G(0) +chr 3422473 G 1 A(0) T(0) C(0) G(100) +chr 3422474 C 1 A(0) T(0) C(100) G(0) +chr 3422475 C 1 A(0) T(0) C(100) G(0) +chr 3422476 A 1 A(100) T(0) C(0) G(0) +chr 3438288 G 1 A(0) T(0) C(0) G(100) +chr 3438289 C 1 A(0) T(0) C(100) G(0) +chr 3438290 A 1 A(100) T(0) C(0) G(0) +chr 3438291 G 1 A(0) T(0) C(0) G(100) +chr 3438292 C 1 A(0) T(0) C(100) G(0) +chr 3438293 A 1 A(100) T(0) C(0) G(0) +chr 3438294 G 1 A(0) T(0) C(0) G(100) +chr 3438295 G 1 A(0) T(0) C(0) G(100) +chr 3438296 A 1 A(100) T(0) C(0) G(0) +chr 3438297 T 1 A(0) T(100) C(0) G(0) +chr 3438298 C 1 A(0) T(0) C(100) G(0) +chr 3438299 G 1 A(0) T(0) C(0) G(100) +chr 3438300 G 1 A(0) T(0) C(0) G(100) +chr 3438301 A 1 A(100) T(0) C(0) G(0) +chr 3438302 T 1 A(0) T(100) C(0) G(0) +chr 3438303 C 1 A(0) T(0) C(100) G(0) +chr 3438304 G 1 A(0) T(0) C(0) G(100) +chr 3438305 A 1 A(100) T(0) C(0) G(0) +chr 3438306 A 1 A(100) T(0) C(0) G(0) +chr 3438307 C 1 A(0) T(0) C(100) G(0) +chr 3438308 T 1 A(0) T(100) C(0) G(0) +chr 3438309 C 1 A(0) T(0) C(100) G(0) +chr 3438310 T 1 A(0) T(100) C(0) G(0) +chr 3438311 G 1 A(0) T(0) C(0) G(100) +chr 3438312 G 1 A(0) T(0) C(0) G(100) +chr 3438313 T 1 A(0) T(100) C(0) G(0) +chr 3438314 T 1 A(0) T(100) C(0) G(0) +chr 3438315 T 1 A(0) T(100) C(0) G(0) +chr 3438316 C 1 A(0) T(0) C(100) G(0) +chr 3438317 T 1 A(0) T(100) C(0) G(0) +chr 3442475 T 1 A(0) T(100) C(0) G(0) +chr 3442476 T 1 A(0) T(100) C(0) G(0) +chr 3442477 A 1 A(100) T(0) C(0) G(0) +chr 3442478 C 1 A(0) T(0) C(100) G(0) +chr 3442479 C 1 A(0) T(0) C(100) G(0) +chr 3442480 G 1 A(0) T(0) C(0) G(100) +chr 3442481 A 1 A(100) T(0) C(0) G(0) +chr 3442482 G 1 A(0) T(0) C(0) G(100) +chr 3442483 G 1 A(0) T(0) C(0) G(100) +chr 3442484 C 1 A(0) T(0) C(100) G(0) +chr 3442485 C 1 A(0) T(0) C(100) G(0) +chr 3442486 A 1 A(100) T(0) C(0) G(0) +chr 3442487 G 1 A(0) T(0) C(0) G(100) +chr 3442488 A 1 A(100) T(0) C(0) G(0) +chr 3442489 A 1 A(100) T(0) C(0) G(0) +chr 3442490 C 1 A(0) T(0) C(100) G(0) +chr 3442491 C 1 A(0) T(0) C(100) G(0) +chr 3442492 G 1 A(0) T(0) C(0) G(100) +chr 3442493 A 1 A(100) T(0) C(0) G(0) +chr 3442494 T 1 A(0) T(100) C(0) G(0) +chr 3442495 A 1 A(100) T(0) C(0) G(0) +chr 3442496 C 1 A(0) T(0) C(100) G(0) +chr 3442497 C 1 A(0) T(0) C(100) G(0) +chr 3442498 A 1 A(100) T(0) C(0) G(0) +chr 3442499 C 1 A(0) T(0) C(100) G(0) +chr 3442500 G 1 A(0) T(0) C(0) G(100) +chr 3442501 A 1 A(100) T(0) C(0) G(0) +chr 3442502 C 1 A(0) T(0) C(100) G(0) +chr 3442503 C 1 A(0) T(0) C(100) G(0) +chr 3442504 C 1 A(0) T(0) C(100) G(0) +chr 3483475 G 1 A(0) T(0) C(0) G(100) +chr 3483476 C 1 A(0) T(0) C(100) G(0) +chr 3483477 T 1 A(0) T(100) C(0) G(0) +chr 3483478 T 1 A(0) T(100) C(0) G(0) +chr 3483479 T 1 A(0) T(100) C(0) G(0) +chr 3483480 T 1 A(0) T(100) C(0) G(0) +chr 3483481 T 1 A(0) T(100) C(0) G(0) +chr 3483482 C 1 A(0) T(0) C(100) G(0) +chr 3483483 C 1 A(0) T(0) C(100) G(0) +chr 3483484 A 1 A(100) T(0) C(0) G(0) +chr 3483485 G 1 A(0) T(0) C(0) G(100) +chr 3483486 C 1 A(0) T(0) C(100) G(0) +chr 3483487 A 1 A(100) T(0) C(0) G(0) +chr 3483488 T 1 A(0) T(100) C(0) G(0) +chr 3483489 C 1 A(0) T(0) C(100) G(0) +chr 3483490 A 1 A(100) T(0) C(0) G(0) +chr 3483491 A 1 A(100) T(0) C(0) G(0) +chr 3483492 C 1 A(0) T(0) C(100) G(0) +chr 3483493 G 1 A(0) T(0) C(0) G(100) +chr 3483494 C 1 A(0) T(0) C(100) G(0) +chr 3483495 C 1 A(0) T(0) C(100) G(0) +chr 3483496 A 1 A(100) T(0) C(0) G(0) +chr 3483497 C 1 A(0) T(0) C(100) G(0) +chr 3483498 T 1 A(0) T(100) C(0) G(0) +chr 3483499 G 1 A(0) T(0) C(0) G(100) +chr 3483500 A 1 A(100) T(0) C(0) G(0) +chr 3483501 A 1 A(100) T(0) C(0) G(0) +chr 3483502 C 1 A(0) T(0) C(100) G(0) +chr 3483503 A 1 A(100) T(0) C(0) G(0) +chr 3483504 A 1 A(100) T(0) C(0) G(0) +chr 3598974 A 1 A(100) T(0) C(0) G(0) +chr 3598975 A 1 A(100) T(0) C(0) G(0) +chr 3598976 T 1 A(0) T(100) C(0) G(0) +chr 3598977 A 1 A(100) T(0) C(0) G(0) +chr 3598978 C 1 A(0) T(0) C(100) G(0) +chr 3598979 C 1 A(0) T(0) C(100) G(0) +chr 3598980 G 1 A(0) T(0) C(0) G(100) +chr 3598981 G 1 A(0) T(0) C(0) G(100) +chr 3598982 G 1 A(0) T(0) C(0) G(100) +chr 3598983 A 1 A(100) T(0) C(0) G(0) +chr 3598984 A 1 A(100) T(0) C(0) G(0) +chr 3598985 G 1 A(0) T(0) C(0) G(100) +chr 3598986 A 1 A(100) T(0) C(0) G(0) +chr 3598987 G 1 A(0) T(0) C(0) G(100) +chr 3598988 A 1 A(100) T(0) C(0) G(0) +chr 3598989 C 1 A(0) T(0) C(100) G(0) +chr 3598990 A 1 A(100) T(0) C(0) G(0) +chr 3598991 A 1 A(100) T(0) C(0) G(0) +chr 3598992 C 1 A(0) T(0) C(100) G(0) +chr 3598993 G 1 A(0) T(0) C(0) G(100) +chr 3598994 G 1 A(0) T(0) C(0) G(100) +chr 3598995 G 1 A(0) T(0) C(0) G(100) +chr 3598996 G 1 A(0) T(0) C(0) G(100) +chr 3598997 T 1 A(0) T(100) C(0) G(0) +chr 3598998 C 1 A(0) T(0) C(100) G(0) +chr 3598999 T 1 A(0) T(100) C(0) G(0) +chr 3599000 C 1 A(0) T(0) C(100) G(0) +chr 3599001 T 1 A(0) T(100) C(0) G(0) +chr 3599002 T 1 A(0) T(100) C(0) G(0) +chr 3599003 T 1 A(0) T(100) C(0) G(0) +chr 3729759 A 1 A(100) T(0) C(0) G(0) +chr 3729760 A 1 A(100) T(0) C(0) G(0) +chr 3729761 C 1 A(0) T(0) C(100) G(0) +chr 3729762 G 1 A(0) T(0) C(0) G(100) +chr 3729763 C 1 A(0) T(0) C(100) G(0) +chr 3729764 G 1 A(0) T(0) C(0) G(100) +chr 3729765 C 1 A(0) T(0) C(100) G(0) +chr 3729766 T 1 A(0) T(100) C(0) G(0) +chr 3729767 A 1 A(100) T(0) C(0) G(0) +chr 3729768 A 1 A(100) T(0) C(0) G(0) +chr 3729769 C 1 A(0) T(0) C(100) G(0) +chr 3729770 C 1 A(0) T(0) C(100) G(0) +chr 3729771 G 1 A(0) T(0) C(0) G(100) +chr 3729772 C 1 A(0) T(0) C(100) G(0) +chr 3729773 C 1 A(0) T(0) C(100) G(0) +chr 3729774 A 1 A(100) T(0) C(0) G(0) +chr 3729775 A 1 A(100) T(0) C(0) G(0) +chr 3729776 T 1 A(0) T(100) C(0) G(0) +chr 3729777 A 1 A(100) T(0) C(0) G(0) +chr 3729778 A 1 A(100) T(0) C(0) G(0) +chr 3729779 T 1 A(0) T(100) C(0) G(0) +chr 3729780 A 1 A(100) T(0) C(0) G(0) +chr 3729781 A 1 A(100) T(0) C(0) G(0) +chr 3729782 C 1 A(0) T(0) C(100) G(0) +chr 3729783 A 1 A(100) T(0) C(0) G(0) +chr 3729784 A 1 A(100) T(0) C(0) G(0) +chr 3729785 A 1 A(100) T(0) C(0) G(0) +chr 3729786 A 1 A(100) T(0) C(0) G(0) +chr 3729787 T 1 A(0) T(100) C(0) G(0) +chr 3729788 T 1 A(0) T(100) C(0) G(0) +chr 3811672 A 1 A(100) T(0) C(0) G(0) +chr 3811673 C 1 A(0) T(0) C(100) G(0) +chr 3811674 C 1 A(0) T(0) C(100) G(0) +chr 3811675 C 1 A(0) T(0) C(100) G(0) +chr 3811676 C 1 A(0) T(0) C(100) G(0) +chr 3811677 G 1 A(0) T(0) C(0) G(100) +chr 3811678 A 1 A(100) T(0) C(0) G(0) +chr 3811679 T 1 A(0) T(100) C(0) G(0) +chr 3811680 A 1 A(100) T(0) C(0) G(0) +chr 3811681 T 1 A(0) T(100) C(0) G(0) +chr 3811682 C 1 A(0) T(0) C(100) G(0) +chr 3811683 G 1 A(0) T(0) C(0) G(100) +chr 3811684 T 1 A(0) T(100) C(0) G(0) +chr 3811685 C 1 A(0) T(0) C(100) G(0) +chr 3811686 G 1 A(0) T(0) C(0) G(100) +chr 3811687 C 1 A(0) T(0) C(100) G(0) +chr 3811688 A 1 A(100) T(0) C(0) G(0) +chr 3811689 G 1 A(0) T(0) C(0) G(100) +chr 3811690 G 1 A(0) T(0) C(0) G(100) +chr 3811691 C 1 A(0) T(0) C(100) G(0) +chr 3811692 G 1 A(0) T(0) C(0) G(100) +chr 3811693 T 1 A(0) T(100) C(0) G(0) +chr 3811694 T 1 A(0) T(100) C(0) G(0) +chr 3811695 G 1 A(0) T(0) C(0) G(100) +chr 3811696 C 1 A(0) T(0) C(100) G(0) +chr 3811697 C 1 A(0) T(0) C(100) G(0) +chr 3811698 G 1 A(0) T(0) C(0) G(100) +chr 3811699 C 1 A(0) T(0) C(100) G(0) +chr 3811700 A 1 A(100) T(0) C(0) G(0) +chr 3811701 C 1 A(0) T(0) C(100) G(0) +chr 3923551 C 1 A(0) T(0) C(100) G(0) +chr 3923552 A 1 A(100) T(0) C(0) G(0) +chr 3923553 A 1 A(100) T(0) C(0) G(0) +chr 3923554 A 1 A(100) T(0) C(0) G(0) +chr 3923555 A 1 A(100) T(0) C(0) G(0) +chr 3923556 G 1 A(0) T(0) C(0) G(100) +chr 3923557 C 1 A(0) T(0) C(100) G(0) +chr 3923558 A 1 A(100) T(0) C(0) G(0) +chr 3923559 G 1 A(0) T(0) C(0) G(100) +chr 3923560 A 1 A(100) T(0) C(0) G(0) +chr 3923561 G 1 A(0) T(0) C(0) G(100) +chr 3923562 T 1 A(0) T(100) C(0) G(0) +chr 3923563 C 1 A(0) T(0) C(100) G(0) +chr 3923564 T 1 A(0) T(100) C(0) G(0) +chr 3923565 G 1 A(0) T(0) C(0) G(100) +chr 3923566 T 1 A(0) T(100) C(0) G(0) +chr 3923567 T 1 A(0) T(100) C(0) G(0) +chr 3923568 G 1 A(0) T(0) C(0) G(100) +chr 3923569 A 1 A(100) T(0) C(0) G(0) +chr 3923570 C 1 A(0) T(0) C(100) G(0) +chr 3923571 C 1 A(0) T(0) C(100) G(0) +chr 3923572 C 1 A(0) T(0) C(100) G(0) +chr 3923573 A 1 A(100) T(0) C(0) G(0) +chr 3923574 T 1 A(0) T(100) C(0) G(0) +chr 3923575 A 1 A(100) T(0) C(0) G(0) +chr 3923576 C 1 A(0) T(0) C(100) G(0) +chr 3923577 G 1 A(0) T(0) C(0) G(100) +chr 3923578 C 1 A(0) T(0) C(100) G(0) +chr 3923579 G 1 A(0) T(0) C(0) G(100) +chr 3923580 C 1 A(0) T(0) C(100) G(0) +chr 3944054 T 1 A(0) T(100) C(0) G(0) +chr 3944055 G 1 A(0) T(0) C(0) G(100) +chr 3944056 G 1 A(0) T(0) C(0) G(100) +chr 3944057 C 1 A(0) T(0) C(100) G(0) +chr 3944058 A 1 A(100) T(0) C(0) G(0) +chr 3944059 T 1 A(0) T(100) C(0) G(0) +chr 3944060 A 1 A(100) T(0) C(0) G(0) +chr 3944061 A 1 A(100) T(0) C(0) G(0) +chr 3944062 G 1 A(0) T(0) C(0) G(100) +chr 3944063 C 1 A(0) T(0) C(100) G(0) +chr 3944064 C 1 A(0) T(0) C(100) G(0) +chr 3944065 A 1 A(100) T(0) C(0) G(0) +chr 3944066 G 1 A(0) T(0) C(0) G(100) +chr 3944067 C 1 A(0) T(0) C(100) G(0) +chr 3944068 T 1 A(0) T(100) C(0) G(0) +chr 3944069 T 1 A(0) T(100) C(0) G(0) +chr 3944070 G 1 A(0) T(0) C(0) G(100) +chr 3944071 A 1 A(100) T(0) C(0) G(0) +chr 3944072 C 1 A(0) T(0) C(100) G(0) +chr 3944073 T 1 A(0) T(100) C(0) G(0) +chr 3944074 G 1 A(0) T(0) C(0) G(100) +chr 3944075 C 1 A(0) T(0) C(100) G(0) +chr 3944076 G 1 A(0) T(0) C(0) G(100) +chr 3944077 A 1 A(100) T(0) C(0) G(0) +chr 3944078 G 1 A(0) T(0) C(0) G(100) +chr 3944079 C 1 A(0) T(0) C(100) G(0) +chr 3944080 G 1 A(0) T(0) C(0) G(100) +chr 3944081 T 1 A(0) T(100) C(0) G(0) +chr 3944082 G 1 A(0) T(0) C(0) G(100) +chr 3944083 A 1 A(100) T(0) C(0) G(0) +chr 4109771 T 1 A(0) T(100) C(0) G(0) +chr 4109772 T 1 A(0) T(100) C(0) G(0) +chr 4109773 T 1 A(0) T(100) C(0) G(0) +chr 4109774 T 1 A(0) T(100) C(0) G(0) +chr 4109775 C 1 A(0) T(0) C(100) G(0) +chr 4109776 C 1 A(0) T(0) C(100) G(0) +chr 4109777 C 1 A(0) T(0) C(100) G(0) +chr 4109778 C 1 A(0) T(0) C(100) G(0) +chr 4109779 G 1 A(0) T(0) C(0) G(100) +chr 4109780 C 1 A(0) T(0) C(100) G(0) +chr 4109781 C 1 A(0) T(0) C(100) G(0) +chr 4109782 G 1 A(0) T(0) C(0) G(100) +chr 4109783 T 1 A(0) T(100) C(0) G(0) +chr 4109784 T 1 A(0) T(100) C(0) G(0) +chr 4109785 A 1 A(100) T(0) C(0) G(0) +chr 4109786 G 1 A(0) T(0) C(0) G(100) +chr 4109787 T 1 A(0) T(100) C(0) G(0) +chr 4109788 A 1 A(100) T(0) C(0) G(0) +chr 4109789 G 1 A(0) T(0) C(0) G(100) +chr 4109790 C 1 A(0) T(0) C(100) G(0) +chr 4109791 G 1 A(0) T(0) C(0) G(100) +chr 4109792 A 1 A(100) T(0) C(0) G(0) +chr 4109793 C 1 A(0) T(0) C(100) G(0) +chr 4109794 T 1 A(0) T(100) C(0) G(0) +chr 4109795 G 1 A(0) T(0) C(0) G(100) +chr 4109796 C 1 A(0) T(0) C(100) G(0) +chr 4109797 A 1 A(100) T(0) C(0) G(0) +chr 4109798 G 1 A(0) T(0) C(0) G(100) +chr 4109799 T 1 A(0) T(100) C(0) G(0) +chr 4109800 T 1 A(0) T(100) C(0) G(0) +chr 4210393 T 1 A(0) T(100) C(0) G(0) +chr 4210394 G 1 A(0) T(0) C(0) G(100) +chr 4210395 G 1 A(0) T(0) C(0) G(100) +chr 4210396 C 1 A(0) T(0) C(100) G(0) +chr 4210397 A 1 A(100) T(0) C(0) G(0) +chr 4210398 T 1 A(0) T(100) C(0) G(0) +chr 4210399 A 1 A(100) T(0) C(0) G(0) +chr 4210400 A 1 A(100) T(0) C(0) G(0) +chr 4210401 G 1 A(0) T(0) C(0) G(100) +chr 4210402 C 1 A(0) T(0) C(100) G(0) +chr 4210403 C 1 A(0) T(0) C(100) G(0) +chr 4210404 A 1 A(100) T(0) C(0) G(0) +chr 4210405 G 1 A(0) T(0) C(0) G(100) +chr 4210406 C 1 A(0) T(0) C(100) G(0) +chr 4210407 T 1 A(0) T(100) C(0) G(0) +chr 4210408 T 1 A(0) T(100) C(0) G(0) +chr 4210409 G 1 A(0) T(0) C(0) G(100) +chr 4210410 A 1 A(100) T(0) C(0) G(0) +chr 4210411 C 1 A(0) T(0) C(100) G(0) +chr 4210412 T 1 A(0) T(100) C(0) G(0) +chr 4210413 G 1 A(0) T(0) C(0) G(100) +chr 4210414 C 1 A(0) T(0) C(100) G(0) +chr 4210415 G 1 A(0) T(0) C(0) G(100) +chr 4210416 A 1 A(100) T(0) C(0) G(0) +chr 4210417 G 1 A(0) T(0) C(0) G(100) +chr 4210418 C 1 A(0) T(0) C(100) G(0) +chr 4210419 G 1 A(0) T(0) C(0) G(100) +chr 4210420 T 1 A(0) T(100) C(0) G(0) +chr 4210421 G 1 A(0) T(0) C(0) G(100) +chr 4210422 A 1 A(100) T(0) C(0) G(0) +chr 4400977 G 1 A(0) T(0) C(0) G(100) +chr 4400978 C 1 A(0) T(0) C(100) G(0) +chr 4400979 G 1 A(0) T(0) C(0) G(100) +chr 4400980 C 1 A(0) T(100) C(0) G(0) +chr 4400981 T 1 A(0) T(100) C(0) G(0) +chr 4400982 T 1 A(0) T(100) C(0) G(0) +chr 4400983 T 1 A(0) T(100) C(0) G(0) +chr 4400984 G 1 A(0) T(0) C(0) G(100) +chr 4400985 C 1 A(0) T(0) C(100) G(0) +chr 4400986 T 1 A(0) T(100) C(0) G(0) +chr 4400987 A 1 A(100) T(0) C(0) G(0) +chr 4400988 A 1 A(100) T(0) C(0) G(0) +chr 4400989 A 1 A(100) T(0) C(0) G(0) +chr 4400990 C 1 A(0) T(0) C(100) G(0) +chr 4400991 T 1 A(0) T(100) C(0) G(0) +chr 4400992 T 1 A(0) T(100) C(0) G(0) +chr 4400993 C 1 A(0) T(0) C(100) G(0) +chr 4400994 T 1 A(0) T(100) C(0) G(0) +chr 4400995 G 1 A(0) T(0) C(0) G(100) +chr 4400996 C 1 A(0) T(0) C(100) G(0) +chr 4400997 C 1 A(0) T(0) C(100) G(0) +chr 4400998 G 1 A(0) T(0) C(0) G(100) +chr 4400999 G 1 A(0) T(0) C(0) G(100) +chr 4401000 A 1 A(100) T(0) C(0) G(0) +chr 4401001 A 1 A(100) T(0) C(0) G(0) +chr 4401002 T 1 A(0) T(100) C(0) G(0) +chr 4401003 A 1 A(100) T(0) C(0) G(0) +chr 4401004 T 1 A(0) T(100) C(0) G(0) +chr 4401005 A 1 A(100) T(0) C(0) G(0) +chr 4401006 A 1 A(100) T(0) C(0) G(0) +chr 4516584 C 1 A(0) T(0) C(100) G(0) +chr 4516585 G 1 A(0) T(0) C(0) G(100) +chr 4516586 C 1 A(0) T(0) C(100) G(0) +chr 4516587 T 1 A(0) T(100) C(0) G(0) +chr 4516588 A 1 A(100) T(0) C(0) G(0) +chr 4516589 C 1 A(0) T(0) C(100) G(0) +chr 4516590 T 1 A(0) T(100) C(0) G(0) +chr 4516591 G 1 A(0) T(0) C(0) G(100) +chr 4516592 A 1 A(100) T(0) C(0) G(0) +chr 4516593 A 1 A(100) T(0) C(0) G(0) +chr 4516594 G 1 A(0) T(0) C(0) G(100) +chr 4516595 G 1 A(0) T(0) C(0) G(100) +chr 4516596 C 1 A(0) T(0) C(100) G(0) +chr 4516597 G 1 A(0) T(0) C(0) G(100) +chr 4516598 T 1 A(0) T(100) C(0) G(0) +chr 4516599 G 1 A(0) T(0) C(0) G(100) +chr 4516600 G 1 A(0) T(0) C(0) G(100) +chr 4516601 T 1 A(0) T(100) C(0) G(0) +chr 4516602 G 1 A(0) T(0) C(0) G(100) +chr 4516603 C 1 A(0) T(0) C(100) G(0) +chr 4516604 G 1 A(0) T(0) C(0) G(100) +chr 4516605 T 1 A(0) T(100) C(0) G(0) +chr 4516606 A 1 A(100) T(0) C(0) G(0) +chr 4516607 A 1 A(100) T(0) C(0) G(0) +chr 4516608 C 1 A(0) T(0) C(100) G(0) +chr 4516609 G 1 A(0) T(0) C(0) G(100) +chr 4516610 G 1 A(0) T(0) C(0) G(100) +chr 4516611 C 1 A(0) T(0) C(100) G(0) +chr 4516612 A 1 A(100) T(0) C(0) G(0) +chr 4516613 A 1 A(100) T(0) C(0) G(0) +chr 4535164 C 1 A(0) T(0) C(100) G(0) +chr 4535165 G 1 A(0) T(0) C(0) G(100) +chr 4535166 G 1 A(0) T(0) C(0) G(100) +chr 4535167 A 1 A(100) T(0) C(0) G(0) +chr 4535168 G 1 A(0) T(0) C(0) G(100) +chr 4535169 T 1 A(0) T(100) C(0) G(0) +chr 4535170 A 1 A(100) T(0) C(0) G(0) +chr 4535171 T 1 A(0) T(100) C(0) G(0) +chr 4535172 C 1 A(0) T(0) C(100) G(0) +chr 4535173 C 1 A(0) T(0) C(100) G(0) +chr 4535174 G 1 A(0) T(0) C(0) G(100) +chr 4535175 T 1 A(0) T(100) C(0) G(0) +chr 4535176 T 1 A(0) T(100) C(0) G(0) +chr 4535177 C 1 A(0) T(0) C(100) G(0) +chr 4535178 C 1 A(0) T(0) C(100) G(0) +chr 4535179 C 1 A(0) T(0) C(100) G(0) +chr 4535180 C 1 A(0) T(0) C(100) G(0) +chr 4535181 A 1 A(100) T(0) C(0) G(0) +chr 4535182 A 1 A(100) T(0) C(0) G(0) +chr 4535183 C 1 A(0) T(0) C(100) G(0) +chr 4535184 G 1 A(0) T(0) C(0) G(100) +chr 4535185 A 1 A(100) T(0) C(0) G(0) +chr 4535186 C 1 A(0) T(0) C(100) G(0) +chr 4535187 A 1 A(100) T(0) C(0) G(0) +chr 4535188 A 1 A(100) T(0) C(0) G(0) +chr 4535189 G 1 A(0) T(0) C(0) G(100) +chr 4535190 C 1 A(0) T(0) C(100) G(0) +chr 4535191 A 1 A(100) T(0) C(0) G(0) +chr 4535192 T 1 A(0) T(100) C(0) G(0) +chr 4535193 C 1 A(0) T(0) C(100) G(0) +chr 4543338 C 1 A(0) T(0) C(100) G(0) +chr 4543339 G 1 A(0) T(0) C(0) G(100) +chr 4543340 C 1 A(0) T(0) C(100) G(0) +chr 4543341 C 1 A(0) T(0) C(100) G(0) +chr 4543342 A 1 A(100) T(0) C(0) G(0) +chr 4543343 G 1 A(0) T(0) C(0) G(100) +chr 4543344 G 1 A(0) T(0) C(0) G(100) +chr 4543345 G 1 A(0) T(0) C(0) G(100) +chr 4543346 A 1 A(100) T(0) C(0) G(0) +chr 4543347 C 1 A(0) T(0) C(100) G(0) +chr 4543348 G 1 A(0) T(0) C(0) G(100) +chr 4543349 T 1 A(0) T(100) C(0) G(0) +chr 4543350 A 1 A(100) T(0) C(0) G(0) +chr 4543351 T 1 A(0) T(100) C(0) G(0) +chr 4543352 C 1 A(0) T(0) C(100) G(0) +chr 4543353 G 1 A(0) T(0) C(0) G(100) +chr 4543354 C 1 A(0) T(0) C(100) G(0) +chr 4543355 G 1 A(0) T(0) C(0) G(100) +chr 4543356 T 1 A(0) T(100) C(0) G(0) +chr 4543357 C 1 A(0) T(0) C(100) G(0) +chr 4543358 G 1 A(0) T(0) C(0) G(100) +chr 4543359 A 1 A(100) T(0) C(0) G(0) +chr 4543360 T 1 A(0) T(100) C(0) G(0) +chr 4543361 A 1 A(100) T(0) C(0) G(0) +chr 4543362 T 1 A(0) T(100) C(0) G(0) +chr 4543363 C 1 A(0) T(0) C(100) G(0) +chr 4543364 T 1 A(0) T(100) C(0) G(0) +chr 4543365 A 1 A(100) T(0) C(0) G(0) +chr 4543366 T 1 A(0) T(100) C(0) G(0) +chr 4543367 T 1 A(0) T(100) C(0) G(0) +chr 4549207 C 1 A(0) T(0) C(100) G(0) +chr 4549208 G 1 A(0) T(0) C(0) G(100) +chr 4549209 G 1 A(0) T(0) C(0) G(100) +chr 4549210 A 1 A(100) T(0) C(0) G(0) +chr 4549211 C 1 A(0) T(0) C(100) G(0) +chr 4549212 A 1 A(100) T(0) C(0) G(0) +chr 4549213 G 1 A(0) T(0) C(0) G(100) +chr 4549214 C 1 A(0) T(0) C(100) G(0) +chr 4549215 G 1 A(0) T(0) C(0) G(100) +chr 4549216 C 1 A(0) T(0) C(100) G(0) +chr 4549217 C 1 A(0) T(0) C(100) G(0) +chr 4549218 G 1 A(0) T(0) C(0) G(100) +chr 4549219 C 1 A(0) T(0) C(100) G(0) +chr 4549220 C 1 A(0) T(0) C(100) G(0) +chr 4549221 A 1 A(100) T(0) C(0) G(0) +chr 4549222 C 1 A(0) T(0) C(100) G(0) +chr 4549223 C 1 A(0) T(0) C(100) G(0) +chr 4549224 A 1 A(100) T(0) C(0) G(0) +chr 4549225 A 1 A(100) T(0) C(0) G(0) +chr 4549226 C 1 A(0) T(0) C(100) G(0) +chr 4549227 A 1 A(100) T(0) C(0) G(0) +chr 4549228 A 1 A(100) T(0) C(0) G(0) +chr 4549229 A 1 A(100) T(0) C(0) G(0) +chr 4549230 G 1 A(0) T(0) C(0) G(100) +chr 4549231 C 1 A(0) T(0) C(100) G(0) +chr 4549232 C 1 A(0) T(0) C(100) G(0) +chr 4549233 A 1 A(100) T(0) C(0) G(0) +chr 4549234 C 1 A(0) T(0) C(100) G(0) +chr 4549235 C 1 A(0) T(0) C(100) G(0) +chr 4549236 A 1 A(100) T(0) C(0) G(0) +chr 4553565 G 1 A(0) T(0) C(0) G(100) +chr 4553566 A 1 A(100) T(0) C(0) G(0) +chr 4553567 G 1 A(0) T(0) C(0) G(100) +chr 4553568 A 1 A(100) T(0) C(0) G(0) +chr 4553569 T 1 A(0) T(100) C(0) G(0) +chr 4553570 G 1 A(0) T(0) C(0) G(100) +chr 4553571 A 1 A(100) T(0) C(0) G(0) +chr 4553572 C 1 A(0) T(0) C(100) G(0) +chr 4553573 G 1 A(0) T(0) C(0) G(100) +chr 4553574 G 1 A(0) T(0) C(0) G(100) +chr 4553575 T 1 A(0) T(100) C(0) G(0) +chr 4553576 T 1 A(0) T(100) C(0) G(0) +chr 4553577 G 1 A(0) T(0) C(0) G(100) +chr 4553578 C 1 A(0) T(0) C(100) G(0) +chr 4553579 A 1 A(100) T(0) C(0) G(0) +chr 4553580 G 1 A(0) T(0) C(0) G(100) +chr 4553581 A 1 A(100) T(0) C(0) G(0) +chr 4553582 G 1 A(0) T(0) C(0) G(100) +chr 4553583 T 1 A(0) T(100) C(0) G(0) +chr 4553584 C 1 A(0) T(0) C(100) G(0) +chr 4553585 A 1 A(100) T(0) C(0) G(0) +chr 4553586 T 1 A(0) T(100) C(0) G(0) +chr 4553587 A 1 A(0) T(0) C(0) G(100) +chr 4553588 C 1 A(0) T(0) C(100) G(0) +chr 4553589 G 1 A(0) T(0) C(0) G(100) +chr 4553590 T 1 A(0) T(100) C(0) G(0) +chr 4553591 T 1 A(0) T(100) C(0) G(0) +chr 4553592 T 1 A(0) T(100) C(0) G(0) +chr 4553593 G 1 A(0) T(0) C(0) G(100) +chr 4553594 A 1 A(100) T(0) C(0) G(0) +chr 4555547 T 1 A(0) T(100) C(0) G(0) +chr 4555548 T 1 A(0) T(100) C(0) G(0) +chr 4555549 C 1 A(0) T(0) C(100) G(0) +chr 4555550 T 1 A(0) T(100) C(0) G(0) +chr 4555551 T 1 A(0) T(100) C(0) G(0) +chr 4555552 G 1 A(0) T(0) C(0) G(100) +chr 4555553 T 1 A(0) T(100) C(0) G(0) +chr 4555554 T 1 A(0) T(100) C(0) G(0) +chr 4555555 G 1 A(0) T(0) C(0) G(100) +chr 4555556 G 1 A(0) T(0) C(0) G(100) +chr 4555557 A 1 A(100) T(0) C(0) G(0) +chr 4555558 T 1 A(0) T(100) C(0) G(0) +chr 4555559 G 1 A(0) T(0) C(0) G(100) +chr 4555560 G 1 A(0) T(0) C(0) G(100) +chr 4555561 C 1 A(0) T(0) C(100) G(0) +chr 4555562 G 1 A(100) T(0) C(0) G(0) +chr 4555563 T 1 A(0) T(100) C(0) G(0) +chr 4555564 A 1 A(100) T(0) C(0) G(0) +chr 4555565 C 1 A(0) T(0) C(100) G(0) +chr 4555566 T 1 A(0) T(100) C(0) G(0) +chr 4555567 C 1 A(0) T(0) C(100) G(0) +chr 4555568 C 1 A(0) T(0) C(100) G(0) +chr 4555569 G 1 A(0) T(0) C(0) G(100) +chr 4555570 G 1 A(0) T(0) C(0) G(100) +chr 4555571 C 1 A(0) T(0) C(100) G(0) +chr 4555572 A 1 A(100) T(0) C(0) G(0) +chr 4555573 G 1 A(0) T(0) C(0) G(100) +chr 4555574 C 1 A(0) T(0) C(100) G(0) +chr 4555575 C 1 A(0) T(0) C(100) G(0) +chr 4555576 A 1 A(100) T(0) C(0) G(0) +chr 4590702 A 1 A(100) T(0) C(0) G(0) +chr 4590703 A 1 A(100) T(0) C(0) G(0) +chr 4590704 A 1 A(100) T(0) C(0) G(0) +chr 4590705 G 1 A(0) T(0) C(0) G(100) +chr 4590706 T 1 A(0) T(100) C(0) G(0) +chr 4590707 G 1 A(0) T(0) C(0) G(100) +chr 4590708 G 1 A(0) T(0) C(0) G(100) +chr 4590709 T 1 A(0) T(100) C(0) G(0) +chr 4590710 A 1 A(100) T(0) C(0) G(0) +chr 4590711 G 1 A(0) T(0) C(0) G(100) +chr 4590712 A 1 A(100) T(0) C(0) G(0) +chr 4590713 T 1 A(0) T(100) C(0) G(0) +chr 4590714 A 1 A(100) T(0) C(0) G(0) +chr 4590715 A 1 A(100) T(0) C(0) G(0) +chr 4590716 C 1 A(0) T(0) C(100) G(0) +chr 4590717 G 1 A(0) T(0) C(0) G(100) +chr 4590718 T 1 A(0) T(100) C(0) G(0) +chr 4590719 G 1 A(0) T(0) C(0) G(100) +chr 4590720 G 1 A(0) T(0) C(0) G(100) +chr 4590721 T 1 A(0) T(100) C(0) G(0) +chr 4590722 G 1 A(0) T(0) C(0) G(100) +chr 4590723 C 1 A(0) T(0) C(100) G(0) +chr 4590724 A 1 A(100) T(0) C(0) G(0) +chr 4590725 G 1 A(0) T(0) C(0) G(100) +chr 4590726 A 1 A(100) T(0) C(0) G(0) +chr 4590727 C 1 A(0) T(0) C(100) G(0) +chr 4590728 T 1 A(0) T(100) C(0) G(0) +chr 4590729 A 1 A(100) T(0) C(0) G(0) +chr 4590730 T 1 A(0) T(100) C(0) G(0) +chr 4590731 G 1 A(0) T(0) C(0) G(100)
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/blat_coverage_report_test1.txt Mon May 19 12:34:01 2014 -0400 @@ -0,0 +1,64 @@ +30 0 0 0 0 0 0 0 + 0_0.666667 30 0 30 chr 4639675 4549207 4549237 1 30, 0, 4549207, cggacagcgccgccaccaacaaagccacca, cggacagcgccgccaccaacaaagccacca, +30 0 0 0 0 0 0 0 + 1_0.600000 30 0 30 chr 4639675 614777 614807 1 30, 0, 614777, aaaacaccggatgctccggcgctggcagat, aaaacaccggatgctccggcgctggcagat, +28 1 0 0 0 0 0 0 + 2_0.400000 30 0 29 chr 4639675 3289283 3289312 1 29, 0, 3289283, tttgcttttagtacaccggattcagaacc, tttgctttcagtacaccggattcagaacc, +30 0 0 0 0 0 0 0 + 4_0.766667 30 0 30 chr 4639675 2665584 2665614 1 30, 0, 2665584, cacgctacgtgcgcccccgcccagaaggcg, cacgctacgtgcgcccccgcccagaaggcg, +20 0 0 0 0 0 0 0 + 5_0.533333 30 4 24 chr 4639675 3375780 3375800 1 20, 4, 3375780, aaaacccgccgaagcgggtt, aaaacccgccgaagcgggtt, +30 0 0 0 0 0 0 0 + 6_0.533333 30 0 30 chr 4639675 965481 965511 1 30, 0, 965481, taagccgttactggcagcaagtgcaggcaa, taagccgttactggcagcaagtgcaggcaa, +30 0 0 0 0 0 0 0 + 7_0.400000 30 0 30 chr 4639675 1781311 1781341 1 30, 0, 1781311, tgaatttaccgttatctatcttgcctgcct, tgaatttaccgttatctatcttgcctgcct, +29 1 0 0 0 0 0 0 + 9_0.400000 30 0 30 chr 4639675 4400977 4401007 1 30, 0, 4400977, gcgttttgctaaacttctgccggaatataa, gcgctttgctaaacttctgccggaatataa, +30 0 0 0 0 0 0 0 + 11_0.533333 30 0 30 chr 4639675 3923551 3923581 1 30, 0, 3923551, caaaagcagagtctgttgacccatacgcgc, caaaagcagagtctgttgacccatacgcgc, +28 2 0 0 0 0 0 0 + 12_0.700000 30 0 30 chr 4639675 3304453 3304483 1 30, 0, 3304453, gcggacgatcttcacggtcgccacgcggac, gcggacgatcttcacggtcaccacgcgggc, +29 1 0 0 0 0 0 0 + 13_0.533333 30 0 30 chr 4639675 4555547 4555577 1 30, 0, 4555547, ttcttgttggatggcatactccggcagcca, ttcttgttggatggcgtactccggcagcca, +30 0 0 0 0 0 0 0 + 14_0.666667 30 0 30 chr 4639675 3811672 3811702 1 30, 0, 3811672, accccgatatcgtcgcaggcgttgccgcac, accccgatatcgtcgcaggcgttgccgcac, +29 1 0 0 0 0 0 0 + 16_0.566667 30 0 30 chr 4639675 1916143 1916173 1 30, 0, 1916143, atgtcctgatcgagcggcgttttaccgacc, atgtcctgatcgagcggcgttttaccgatc, +30 0 0 0 0 0 0 0 + 18_0.566667 30 0 30 chr 4639675 1860631 1860661 1 30, 0, 1860631, gtggtctcaagcccaaaggaagagtgaggc, gtggtctcaagcccaaaggaagagtgaggc, +30 0 0 0 0 0 0 0 + 19_0.566667 30 0 30 chr 4639675 1018466 1018496 1 30, 0, 1018466, gttgtaagcgtcagaaccgatgcggtcggt, gttgtaagcgtcagaaccgatgcggtcggt, +30 0 0 0 0 0 0 0 + 22_0.566667 30 0 30 chr 4639675 2006716 2006746 1 30, 0, 2006716, cggtattcctcagttctcgctgcatgcctg, cggtattcctcagttctcgctgcatgcctg, +30 0 0 0 0 0 0 0 - 23_0.600000 30 0 30 chr 4639675 4516584 4516614 1 30, 0, 4516584, cgctactgaaggcgtggtgcgtaacggcaa, cgctactgaaggcgtggtgcgtaacggcaa, +30 0 0 0 0 0 0 0 - 24_0.733333 30 0 30 chr 4639675 1535123 1535153 1 30, 0, 1535123, gaacagcagcagcgacgtggtgcgcccgcg, gaacagcagcagcgacgtggtgcgcccgcg, +30 0 0 0 0 0 0 0 + 27_0.600000 30 0 30 chr 4639675 3442475 3442505 1 30, 0, 3442475, ttaccgaggccagaaccgataccacgaccc, ttaccgaggccagaaccgataccacgaccc, +29 1 0 0 0 0 0 0 + 29_0.700000 30 0 30 chr 4639675 2807120 2807150 1 30, 0, 2807120, ctcgtccggcgggcggttttgccgacaagg, ctcgtccggcgggcggttttgccgataagg, +30 0 0 0 0 0 0 0 + 34_0.533333 30 0 30 chr 4639675 421739 421769 1 30, 0, 421739, tgatgttaaatgcatggcacctgccggtgc, tgatgttaaatgcatggcacctgccggtgc, +30 0 0 0 0 0 0 0 - 35_0.466667 30 0 30 chr 4639675 1334399 1334429 1 30, 0, 1334399, ggttaacctcgaatatctcggcaaagcagt, ggttaacctcgaatatctcggcaaagcagt, +30 0 0 0 0 0 0 0 + 36_0.433333 30 0 30 chr 4639675 2906502 2906532 1 30, 0, 2906502, tgttggcaacatggcgagcgtaatcaatta, tgttggcaacatggcgagcgtaatcaatta, +30 0 0 0 0 0 0 0 + 38_0.533333 30 0 30 chr 4639675 3438288 3438318 1 30, 0, 3438288, gcagcaggatcggatcgaactctggtttct, gcagcaggatcggatcgaactctggtttct, +29 1 0 0 0 0 0 0 + 39_0.400000 30 0 30 chr 4639675 2893756 2893786 1 30, 0, 2893756, taatgcggcattctcctgatttattgtcac, tattgcggcattctcctgatttattgtcac, +29 0 0 0 0 0 0 0 + 41_0.566667 30 1 30 chr 4639675 708504 708533 1 29, 1, 708504, gctgacggtcagcagggatacttcctgca, gctgacggtcagcagggatacttcctgca, +30 0 0 0 0 0 0 0 + 43_0.466667 30 0 30 chr 4639675 3483475 3483505 1 30, 0, 3483475, gctttttccagcatcaacgccactgaacaa, gctttttccagcatcaacgccactgaacaa, +30 0 0 0 0 0 0 0 + 44_0.433333 30 0 30 chr 4639675 4590702 4590732 1 30, 0, 4590702, aaagtggtagataacgtggtgcagactatg, aaagtggtagataacgtggtgcagactatg, +30 0 0 0 0 0 0 0 + 49_0.433333 30 0 30 chr 4639675 3341305 3341335 1 30, 0, 3341305, cgttatacggaacaacatttaactccagcg, cgttatacggaacaacatttaactccagcg, +28 2 0 0 0 0 0 0 + 50_0.466667 30 0 30 chr 4639675 2777224 2777254 1 30, 0, 2777224, ttgctgttgccatcgcttttcaggacatac, ttgctgttgccgtcacttttcaggacatac, +30 0 0 0 0 0 0 0 + 53_0.533333 30 0 30 chr 4639675 1768655 1768685 1 30, 0, 1768655, ccaggcactccgccatatttttgccatgac, ccaggcactccgccatatttttgccatgac, +30 0 0 0 0 0 0 0 + 54_0.400000 30 0 30 chr 4639675 2359543 2359573 1 30, 0, 2359543, gtattcttcattgatttgtaagcgggtacc, gtattcttcattgatttgtaagcgggtacc, +30 0 0 0 0 0 0 0 + 57_0.566667 30 0 30 chr 4639675 256715 256745 1 30, 0, 256715, cgcgaaatcctcgacgtccaggcacgtatt, cgcgaaatcctcgacgtccaggcacgtatt, +30 0 0 0 0 0 0 0 + 58_0.300000 30 0 30 chr 4639675 1108478 1108508 1 30, 0, 1108478, gttatccattaaaatagatcggatcgatat, gttatccattaaaatagatcggatcgatat, +30 0 0 0 0 0 0 0 + 60_0.533333 30 0 30 chr 4639675 1130738 1130768 1 30, 0, 1130738, aatctggcgaatgctgatagcgtgaccggt, aatctggcgaatgctgatagcgtgaccggt, +30 0 0 0 0 0 0 0 - 61_0.366667 30 0 30 chr 4639675 1578065 1578095 1 30, 0, 1578065, aaaaaacggctgacaaagctttcaaactga, aaaaaacggctgacaaagctttcaaactga, +30 0 0 0 0 0 0 0 + 63_0.566667 30 0 30 chr 4639675 3422447 3422477 1 30, 0, 3422447, tcacgctcgcagtcaagctggcttatgcca, tcacgctcgcagtcaagctggcttatgcca, +30 0 0 0 0 0 0 0 + 63_0.566667 30 0 30 chr 4639675 2724848 2724878 1 30, 0, 2724848, tcacgctcgcagtcaagctggcttatgcca, tcacgctcgcagtcaagctggcttatgcca, +30 0 0 0 0 0 0 0 - 63_0.566667 30 0 30 chr 4639675 4210393 4210423 1 30, 0, 4210393, tggcataagccagcttgactgcgagcgtga, tggcataagccagcttgactgcgagcgtga, +30 0 0 0 0 0 0 0 - 63_0.566667 30 0 30 chr 4639675 3944054 3944084 1 30, 0, 3944054, tggcataagccagcttgactgcgagcgtga, tggcataagccagcttgactgcgagcgtga, +29 1 0 0 0 0 0 0 + 64_0.500000 30 0 30 chr 4639675 4553565 4553595 1 30, 0, 4553565, gagatgacggttgcagagtcatgcgtttga, gagatgacggttgcagagtcatacgtttga, +30 0 0 0 0 0 0 0 + 65_0.533333 30 0 30 chr 4639675 3154209 3154239 1 30, 0, 3154209, tctggatcacgcgcaaacactggctatcgt, tctggatcacgcgcaaacactggctatcgt, +30 0 0 0 0 0 0 0 + 66_0.466667 30 0 30 chr 4639675 3330950 3330980 1 30, 0, 3330950, tctgctttagcaaacagagtgtggtcacga, tctgctttagcaaacagagtgtggtcacga, +30 0 0 0 0 0 0 0 + 68_0.566667 30 0 30 chr 4639675 699412 699442 1 30, 0, 699412, gaaggatagttggtcagcaacaccagcggc, gaaggatagttggtcagcaacaccagcggc, +30 0 0 0 0 0 0 0 + 69_0.733333 30 0 30 chr 4639675 3218070 3218100 1 30, 0, 3218070, ggcgcgctgtcggccacggcgaaatcgacc, ggcgcgctgtcggccacggcgaaatcgacc, +29 1 0 0 0 0 0 0 + 72_0.533333 30 0 30 chr 4639675 2811982 2812012 1 30, 0, 2811982, aactggaagggcttgggatgacacaacagc, aactggaagggcttgggatgacgcaacagc, +29 1 0 0 0 0 0 0 + 73_0.500000 30 0 30 chr 4639675 2480740 2480770 1 30, 0, 2480740, tttaagcgccaaccaggcttctttggttgc, tttaagcgccaaccaggcttctttagttgc, +30 0 0 0 0 0 0 0 + 74_0.433333 30 0 30 chr 4639675 1904984 1905014 1 30, 0, 1904984, acccttctttcgccatatcaaactgatgtc, acccttctttcgccatatcaaactgatgtc, +30 0 0 0 0 0 0 0 + 78_0.566667 30 0 30 chr 4639675 4535164 4535194 1 30, 0, 4535164, cggagtatccgttccccaacgacaagcatc, cggagtatccgttccccaacgacaagcatc, +30 0 0 0 0 0 0 0 + 79_0.500000 30 0 30 chr 4639675 3598974 3599004 1 30, 0, 3598974, aataccgggaagagacaacggggtctcttt, aataccgggaagagacaacggggtctcttt, +30 0 0 0 0 0 0 0 - 80_0.500000 30 0 30 chr 4639675 1333814 1333844 1 30, 0, 1333814, gagaatcagggcttcgcaaccctgtcatta, gagaatcagggcttcgcaaccctgtcatta, +30 0 0 0 0 0 0 0 + 82_0.500000 30 0 30 chr 4639675 962544 962574 1 30, 0, 962544, actgggttgctctgaacaagaaaggcgcta, actgggttgctctgaacaagaaaggcgcta, +30 0 0 0 0 0 0 0 + 83_0.533333 30 0 30 chr 4639675 4543338 4543368 1 30, 0, 4543338, cgccagggacgtatcgcgtcgatatctatt, cgccagggacgtatcgcgtcgatatctatt, +30 0 0 0 0 0 0 0 + 86_0.566667 30 0 30 chr 4639675 159366 159396 1 30, 0, 159366, ggcaacgcaggcgcatgattctgcttggaa, ggcaacgcaggcgcatgattctgcttggaa, +29 0 0 1 0 0 0 0 + 87_0.433333 30 0 30 chr 4639675 2137315 2137345 1 30, 0, 2137315, cgctggatgaaaancgtgaatatcacacca, cgctggatgaaaaacgtgaatatcacacca, +30 0 0 0 0 0 0 0 + 88_0.533333 30 0 30 chr 4639675 2263609 2263639 1 30, 0, 2263609, cgtaccgggctgaaagtagaagagcgtttc, cgtaccgggctgaaagtagaagagcgtttc, +30 0 0 0 0 0 0 0 + 90_0.466667 30 0 30 chr 4639675 609915 609945 1 30, 0, 609915, atcaccgtttcgctaaccggtacgtttaac, atcaccgtttcgctaaccggtacgtttaac, +29 1 0 0 0 0 0 0 + 91_0.566667 30 0 30 chr 4639675 2506977 2507007 1 30, 0, 2506977, ttcgcccggcaagcttacccaacgcttatc, ttcgcctggcaagcttacccaacgcttatc, +30 0 0 0 0 0 0 0 + 92_0.533333 30 0 30 chr 4639675 4109771 4109801 1 30, 0, 4109771, ttttccccgccgttagtagcgactgcagtt, ttttccccgccgttagtagcgactgcagtt, +30 0 0 0 0 0 0 0 + 93_0.400000 30 0 30 chr 4639675 2250545 2250575 1 30, 0, 2250545, ttatttgcccgatgagtcagtttattgcag, ttatttgcccgatgagtcagtttattgcag, +30 0 0 0 0 0 0 0 + 94_0.466667 30 0 30 chr 4639675 1274949 1274979 1 30, 0, 1274949, ccacggtgatatctggtgccatactgataa, ccacggtgatatctggtgccatactgataa, +30 0 0 0 0 0 0 0 + 95_0.466667 30 0 30 chr 4639675 3279675 3279705 1 30, 0, 3279675, tcccccgtaaggcctttctttttctttcgt, tcccccgtaaggcctttctttttctttcgt, +30 0 0 0 0 0 0 0 + 97_0.566667 30 0 30 chr 4639675 2779110 2779140 1 30, 0, 2779110, tgcgccgccggattgttgctcaacatgctt, tgcgccgccggattgttgctcaacatgctt, +30 0 0 0 0 0 0 0 + 98_0.366667 30 0 30 chr 4639675 3729759 3729789 1 30, 0, 3729759, aacgcgctaaccgccaataataacaaaatt, aacgcgctaaccgccaataataacaaaatt,