Mercurial > repos > devteam > bowtie2
changeset 13:12450efac659 draft
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/bowtie2 commit b22fc2e7243522b264f3d5d00706df8d18366405
| author | devteam |
|---|---|
| date | Mon, 09 Jan 2017 04:31:00 -0500 |
| parents | 781e3a3b9d31 |
| children | 937aa69e715f |
| files | bowtie2_wrapper.xml tool_dependencies.xml |
| diffstat | 2 files changed, 1 insertions(+), 10 deletions(-) [+] |
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--- a/bowtie2_wrapper.xml Sun Jan 08 07:58:27 2017 -0500 +++ b/bowtie2_wrapper.xml Mon Jan 09 04:31:00 2017 -0500 @@ -16,7 +16,7 @@ ln -s -f '$reference_genome.own_file' genome.fa && #set index_path = 'genome' #else: - #set index_path = '$reference_genome.index.fields.path' + #set index_path = $reference_genome.index.fields.path #end if ## execute bowtie2
--- a/tool_dependencies.xml Sun Jan 08 07:58:27 2017 -0500 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,9 +0,0 @@ -<?xml version="1.0"?> -<tool_dependency> - <package name="bowtie2" version="2.2.6"> - <repository changeset_revision="0d9cd7487cc9" name="package_bowtie_2_2_6" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> - </package> - <package name="samtools" version="1.2"> - <repository changeset_revision="f6ae3ba3f3c1" name="package_samtools_1_2" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> - </package> -</tool_dependency>