changeset 0:ffa8aaa14f7c draft

Uploaded initial tarball.
author devteam
date Fri, 28 Sep 2012 13:53:48 -0400
parents
children 150b3fe44caa
files bwa_color_wrapper.xml bwa_wrapper.py bwa_wrapper.xml test-data/bwa_wrapper_in1.fastqsanger test-data/bwa_wrapper_in2.fastqsanger test-data/bwa_wrapper_in3.fastqsanger test-data/bwa_wrapper_in4.fastqcssanger test-data/bwa_wrapper_in5.fastqcssanger test-data/bwa_wrapper_in6.fastqcssanger test-data/bwa_wrapper_out1.sam test-data/bwa_wrapper_out2.sam test-data/bwa_wrapper_out3.sam test-data/bwa_wrapper_out4.sam test-data/bwa_wrapper_out5.sam test-data/bwa_wrapper_out6.sam test-data/bwa_wrapper_out7.sam test-data/bwa_wrapper_out8.sam test-data/chr_m.fasta test-data/hg19chrX_midpart.fasta test-data/phiX.fasta tool-data/bwa_index.loc.sample tool-data/bwa_index_color.loc.sample tool_data_table_conf.xml.sample tool_dependencies.xml
diffstat 24 files changed, 6846 insertions(+), 0 deletions(-) [+]
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/bwa_color_wrapper.xml	Fri Sep 28 13:53:48 2012 -0400
@@ -0,0 +1,485 @@
+<tool id="bwa_color_wrapper" name="Map with BWA for SOLiD" version="1.0.2">
+  <requirements>
+    <requirement type="package" version="0.5.9">bwa</requirement>
+  </requirements>
+  <description></description>
+  <parallelism method="basic"></parallelism>
+  <command interpreter="python">
+    bwa_wrapper.py 
+      --threads="4"
+      --color-space
+
+      ## reference source
+      --fileSource=$genomeSource.refGenomeSource
+      #if $genomeSource.refGenomeSource == "history":
+        ##build index on the fly
+        --ref="${genomeSource.ownFile}"
+        --dbkey=$dbkey
+      #else:
+        ##use precomputed indexes
+        --ref="${genomeSource.indices.fields.path}"
+        --do_not_build_index
+      #end if
+
+      ## input file(s)
+      --input1=$paired.input1
+      #if $paired.sPaired == "paired":
+        --input2=$paired.input2
+      #end if
+
+      ## output file
+      --output=$output
+
+      ## run parameters
+      --genAlignType=$paired.sPaired
+      --params=$params.source_select
+      #if $params.source_select != "pre_set":
+        --maxEditDist=$params.maxEditDist
+        --fracMissingAligns=$params.fracMissingAligns
+        --maxGapOpens=$params.maxGapOpens
+        --maxGapExtens=$params.maxGapExtens
+        --disallowLongDel=$params.disallowLongDel
+        --disallowIndel=$params.disallowIndel
+        --seed=$params.seed
+        --maxEditDistSeed=$params.maxEditDistSeed
+        --mismatchPenalty=$params.mismatchPenalty
+        --gapOpenPenalty=$params.gapOpenPenalty
+        --gapExtensPenalty=$params.gapExtensPenalty
+        --suboptAlign="${params.suboptAlign}"
+        --noIterSearch=$params.noIterSearch
+        --outputTopN=$params.outputTopN
+        --outputTopNDisc=$params.outputTopNDisc
+        --maxInsertSize=$params.maxInsertSize
+        --maxOccurPairing=$params.maxOccurPairing
+        #if $params.readGroup.specReadGroup == "yes"
+          --rgid="$params.readGroup.rgid"
+          --rgcn="$params.readGroup.rgcn"
+          --rgds="$params.readGroup.rgds"
+          --rgdt="$params.readGroup.rgdt"
+          --rgfo="$params.readGroup.rgfo"
+          --rgks="$params.readGroup.rgks"
+          --rglb="$params.readGroup.rglb"
+          --rgpg="$params.readGroup.rgpg"
+          --rgpi="$params.readGroup.rgpi"
+          --rgpl="$params.readGroup.rgpl"
+          --rgpu="$params.readGroup.rgpu"
+          --rgsm="$params.readGroup.rgsm"
+        #end if
+      #end if
+
+      ## suppress output SAM header
+      --suppressHeader=$suppressHeader
+  </command>
+  <requirements>
+    <requirement type="package">bwa</requirement>
+  </requirements>
+  <inputs>
+    <conditional name="genomeSource">
+      <param name="refGenomeSource" type="select" label="Will you select a reference genome from your history or use a built-in index?">
+        <option value="indexed">Use a built-in index</option>
+        <option value="history">Use one from the history</option>
+      </param>
+      <when value="indexed">
+        <param name="indices" type="select" label="Select a reference genome">
+          <options from_data_table="bwa_indexes_color">
+            <filter type="sort_by" column="2" />
+            <validator type="no_options" message="No indexes are available for the selected input dataset" />
+          </options>
+        </param>
+      </when>
+      <when value="history">
+        <param name="ownFile" type="data" format="fasta" metadata_name="dbkey" label="Select a reference from history" />
+      </when>
+    </conditional>
+    <conditional name="paired">
+      <param name="sPaired" type="select" label="Is this library mate-paired?">
+        <option value="single">Single-end</option>
+        <option value="paired">Paired-end</option>
+      </param>
+      <when value="single">
+        <param name="input1" type="data" format="fastqcssanger" label="FASTQ file (Nucleotide-space recoded from color-space)">
+          <help>Convert color-space data to nucleotide-space (see help section below for steps). Must have Sanger-scaled quality values with ASCII offset 33</help>
+        </param>
+      </when>
+      <when value="paired">
+        <param name="input1" type="data" format="fastqcssanger" label="Forward FASTQ file (Nucleotide-space recoded from color-space)" help="Must have Sanger-scaled quality values with ASCII offset 33">
+          <help>Convert color-space data to nucleotide-space (see help section below for steps). Must have Sanger-scaled quality values with ASCII offset 33</help>
+        </param>
+        <param name="input2" type="data" format="fastqcssanger" label="Reverse FASTQ file (Nucleotide-space recoded from color-space)" help="Must have Sanger-scaled quality values with ASCII offset 33">
+          <help>Convert color-space data to nucleotide-space (see help section below for steps). Must have Sanger-scaled quality values with ASCII offset 33</help>
+        </param>
+      </when>
+    </conditional>
+    <conditional name="params">
+      <param name="source_select" type="select" label="BWA settings to use" help="For most mapping needs use Commonly Used settings. If you want full control use Full Parameter List">
+        <option value="pre_set">Commonly Used</option>
+        <option value="full">Full Parameter List</option>
+      </param>
+      <when value="pre_set" />
+      <when value="full">
+        <param name="maxEditDist" type="integer" value="0" label="Maximum edit distance (aln -n)" help="Enter this value OR a fraction of missing alignments, not both" />
+        <param name="fracMissingAligns" type="float" value="0.04" label="Fraction of missing alignments given 2% uniform base error rate (aln -n)" help="Enter this value OR maximum edit distance, not both" />
+        <param name="maxGapOpens" type="integer" value="1" label="Maximum number of gap opens (aln -o)" />
+        <param name="maxGapExtens" type="integer" value="-1" label="Maximum number of gap extensions (aln -e)" help="-1 for k-difference mode (disallowing long gaps)" />
+        <param name="disallowLongDel" type="integer" value="16" label="Disallow long deletion within [value] bp towards the 3'-end (aln -d)" />
+        <param name="disallowIndel" type="integer" value="5" label="Disallow insertion/deletion within [value] bp towards the end (aln -i)" />
+        <param name="seed" type="integer" value="-1" label="Number of first subsequences to take as seed (aln -l)" help="Enter -1 for infinity" />
+        <param name="maxEditDistSeed" type="integer" value="2" label="Maximum edit distance in the seed (aln -k)" />
+        <param name="mismatchPenalty" type="integer" value="3" label="Mismatch penalty (aln -M)" help="BWA will not search for suboptimal hits with a score lower than [value]" />
+        <param name="gapOpenPenalty" type="integer" value="11" label="Gap open penalty (aln -O)" />
+        <param name="gapExtensPenalty" type="integer" value="4" label="Gap extension penalty (aln -E)" />
+        <param name="suboptAlign" type="integer" optional="True" label="Proceed with suboptimal alignments if there are no more than INT equally best hits. (aln -R)" help="For paired-end reads only. By default, BWA only searches for suboptimal alignments if the top hit is unique. Using this option has no effect on accuracy for single-end reads. It is mainly designed for improving the alignment accuracy of paired-end reads. However, the pairing procedure will be slowed down, especially for very short reads (~32bp)" />
+        <param name="noIterSearch" type="boolean" truevalue="true" falsevalue="false" checked="no" label="Disable iterative search (aln -N)" help="All hits with no more than maxDiff differences will be found. This mode is much slower than the default" />
+        <param name="outputTopN" type="integer" value="3" label="Maximum number of alignments to output in the XA tag for reads paired properly (samse/sampe -n)" help="If a read has more than INT hits, the XA tag will not be written" />
+        <param name="outputTopNDisc" type="integer" value="10" label="Maximum number of alignments to output in the XA tag for disconcordant read pairs (excluding singletons) (sampe -N)" help="For paired-end reads only. If a read has more than INT hits, the XA tag will not be written" />
+        <param name="maxInsertSize" type="integer" value="500" label="Maximum insert size for a read pair to be considered as being mapped properly (sampe -a)" help="For paired-end reads only. Only used when there are not enough good alignments to infer the distribution of insert sizes" />
+        <param name="maxOccurPairing" type="integer" value="100000" label="Maximum occurrences of a read for pairing (sampe -o)" help="For paired-end reads only. A read with more occurrences will be treated as a single-end read. Reducing this parameter helps faster pairing" />
+        <conditional name="readGroup">
+          <param name="specReadGroup" type="select" label="Specify the read group for this file? (samse/sampe -r)">
+            <option value="yes">Yes</option>
+            <option value="no" selected="True">No</option>
+          </param>
+          <when value="yes">
+            <param name="rgid" type="text" size="25" label="Read group identifier (ID). Each @RG line must have a unique ID. The value of ID is used in the RG 
+tags of alignment records. Must be unique among all read groups in header section." help="Required if RG specified. Read group 
+IDs may be modified when merging SAM files in order to handle collisions." />
+            <param name="rgcn" type="text" size="25" label="Sequencing center that produced the read (CN)" help="Optional" />
+            <param name="rgds" type="text" size="25" label="Description (DS)" help="Optional" />
+            <param name="rgdt" type="text" size="25" label="Date that run was produced (DT)" help="Optional. ISO8601 format date or date/time, like YYYY-MM-DD" />
+            <param name="rgfo" type="text" size="25" label="Flow order (FO). The array of nucleotide bases that correspond to the nucleotides used for each 
+flow of each read." help="Optional. Multi-base flows are encoded in IUPAC format, and non-nucleotide flows by 
+various other characters. Format : /\*|[ACMGRSVTWYHKDBN]+/" />
+            <param name="rgks" type="text" size="25" label="The array of nucleotide bases that correspond to the key sequence of each read (KS)" help="Optional" />
+            <param name="rglb" type="text" size="25" label="Library name (LB)" help="Required if RG specified" />
+            <param name="rgpg" type="text" size="25" label="Programs used for processing the read group (PG)" help="Optional" />
+            <param name="rgpi" type="text" size="25" label="Predicted median insert size (PI)" help="Optional" />
+            <param name="rgpl" type="text" size="25" label="Platform/technology used to produce the reads (PL)" help="Required if RG specified. Valid values : CAPILLARY, LS454, ILLUMINA, 
+SOLID, HELICOS, IONTORRENT and PACBIO" />
+            <param name="rgpu" type="text" size="25" label="Platform unit (PU)" help="Optional. Unique identifier (e.g. flowcell-barcode.lane for Illumina or slide for SOLiD)" />
+            <param name="rgsm" type="text" size="25" label="Sample (SM)" help="Required if RG specified. Use pool name where a pool is being sequenced" />
+          </when>
+          <when value="no" />
+        </conditional>
+      </when>
+    </conditional>
+    <param name="suppressHeader" type="boolean" truevalue="true" falsevalue="false" checked="False" label="Suppress the header in the output SAM file" help="BWA produces SAM with several lines of header information" />
+  </inputs>
+  <outputs>
+    <data format="sam" name="output" label="${tool.name} on ${on_string}: mapped reads">
+      <actions>
+        <conditional name="genomeSource.refGenomeSource">
+          <when value="indexed">
+            <action type="metadata" name="dbkey">
+              <option type="from_data_table" name="bwa_indexes_color" column="1">
+                <filter type="param_value" column="0" value="#" compare="startswith" keep="False"/>
+                <filter type="param_value" ref="genomeSource.indices" column="0" />
+              </option>
+            </action>
+          </when>
+          <when value="history">
+            <action type="metadata" name="dbkey">
+              <option type="from_param" name="genomeSource.ownFile" param_attribute="dbkey" />
+            </action>
+          </when>
+        </conditional>
+      </actions>
+    </data>
+  </outputs>
+  <tests>
+    <test>
+      <!--
+      BWA commands:
+      cp test-data/hg19chrX_midpart.fasta hg19chrX_midpart.fasta
+      bwa index -c -a is hg19chrX_midpart.fasta
+      bwa aln -t 4 -c hg19chrX_midpart.fasta test-data/bwa_wrapper_in4.fastqcssanger > bwa_wrapper_out4.sai
+      bwa samse hg19chrX_midpart.fasta bwa_wrapper_out4.sai test-data/bwa_wrapper_in4.fastqcssanger > bwa_wrapper_out4.u.sam
+      hg19chrX_midpart.fasta is the prefix for the reference files (hg19chrX_midpart.fasta.amb, hg19chrX_midpart.fasta.ann, hg19chrX_midpart.fasta.bwt, ...)
+      It's just part of hg19 chrX, from the middle of the chromosome
+      plain old sort doesn't handle underscores like python:
+      python -c "import sys; lines=file(sys.argv[1],'rb').readlines(); lines.sort(); file(sys.argv[2],'wb').write(''.join(lines))" bwa_wrapper_out4.u.sam bwa_wrapper_out4.sam
+      -->
+      <param name="refGenomeSource" value="history" />
+      <param name="ownFile" value="hg19chrX_midpart.fasta" />
+      <param name="sPaired" value="single" />
+      <param name="input1" value="bwa_wrapper_in4.fastqcssanger" ftype="fastqcssanger" />
+      <param name="source_select" value="pre_set" />
+      <param name="suppressHeader" value="false" />
+      <output name="output" file="bwa_wrapper_out4.sam" ftype="sam" sort="True" lines_diff="2" />
+    </test>
+    <test>
+      <!--
+      BWA commands:
+      bwa aln -t 4 -c equCab2chrM_cs.fa test-data/bwa_wrapper_in5.fastqcssanger > bwa_wrapper_out5a.sai
+      bwa aln -t 4 -c equCab2chrM_cs.fa test-data/bwa_wrapper_in6.fastqcssanger > bwa_wrapper_out5b.sai
+      bwa sampe equCab2chrM_cs.fa bwa_wrapper_out5a.sai bwa_wrapper_out5b.sai test-data/bwa_wrapper_in5.fastqcssanger test-data/bwa_wrapper_in6.fastqcssanger > bwa_wrapper_out5.u.sam
+      equCab2chrM_cs.fa is the prefix of the index files (equCab2chrM_cs.fa.amb, equCab2chrM_cs.fa.ann, ...)
+      remove the comment lines (beginning with '@') from the resulting sam file
+      plain old sort doesn't handle underscores like python:
+      python -c "import sys; lines=file(sys.argv[1],'rb').readlines(); lines.sort(); file(sys.argv[2],'wb').write(''.join(lines))" bwa_wrapper_out5.u.sam bwa_wrapper_out5.sam
+      -->
+      <param name="refGenomeSource" value="indexed" />
+      <param name="indices" value="equCab2chrM" />
+      <param name="sPaired" value="paired" />
+      <param name="input1" value="bwa_wrapper_in5.fastqcssanger" ftype="fastqcssanger" />
+      <param name="input2" value="bwa_wrapper_in6.fastqcssanger" ftype="fastqcssanger" />
+      <param name="source_select" value="pre_set" />
+      <param name="suppressHeader" value="true" />
+      <output name="output" file="bwa_wrapper_out5.sam" ftype="sam" sort="True" />
+    </test>
+    <test>
+      <!--
+      BWA commands:
+      bwa aln -n 0.04 -o 1 -e -1 -d 16 -i 5 -k 2 -t 4 -M 3 -O 11 -E 4 -R -N -c hg19chrX_midpart.fasta test-data/bwa_wrapper_in4.fastqcssanger > bwa_wrapper_out6.sai
+      bwa samse -n 3 -r "@RG\tID:474747\tDS:description\tDT:2011-03-14\tLB:lib-child-1-A\tPI:200\tPL:SOLID\tSM:child-1" hg19chrX_midpart.fasta bwa_wrapper_out6.sai test-data/bwa_wrapper_in4.fastqcssanger > bwa_wrapper_out6.u.sam
+      hg19chrX_midpart_cs.fa is the prefix of the index files (hg19chrX_midpart.fa.amb, hg19chrX_midpart.fa.ann, ...)
+      (It's just part of hg19 chrX, from the middle of the chromosome)
+      plain old sort doesn't handle underscores like python:
+      python -c "import sys; lines=file(sys.argv[1],'rb').readlines(); lines.sort(); file(sys.argv[2],'wb').write(''.join(lines))" bwa_wrapper_out6.u.sam bwa_wrapper_out6.sam
+      -->
+      <param name="refGenomeSource" value="indexed" />
+      <param name="indices" value="hg19chrX_midpart" />
+      <param name="sPaired" value="single" />
+      <param name="input1" value="bwa_wrapper_in4.fastqcssanger" ftype="fastqcssanger" />
+      <param name="source_select" value="full" />
+      <param name="maxEditDist" value="0" />  
+      <param name="fracMissingAligns" value="0.04" />
+      <param name="maxGapOpens" value="1" />
+      <param name="maxGapExtens" value="-1" />
+      <param name="disallowLongDel" value="16" />
+      <param name="disallowIndel" value="5" />
+      <param name="seed" value="-1" />
+      <param name="maxEditDistSeed" value="2" />
+      <param name="mismatchPenalty" value="3" />
+      <param name="gapOpenPenalty" value="11" />
+      <param name="gapExtensPenalty" value="4" />
+      <param name="suboptAlign" value="" />
+      <param name="noIterSearch" value="true" />
+      <param name="outputTopN" value="3" />
+      <param name="outputTopNDisc" value="10" />
+      <param name="maxInsertSize" value="500" />
+      <param name="maxOccurPairing" value="100000" />
+      <param name="specReadGroup" value="yes" />
+      <param name="rgid" value="474747" />
+      <param name="rgcn" value="" />
+      <param name="rgds" value="description" />
+      <param name="rgdt" value="2011-03-14" />
+      <param name="rgfo" value="" />
+      <param name="rgks" value="" />
+      <param name="rglb" value="lib-child-1-A" />
+      <param name="rgpg" value="" />
+      <param name="rgpi" value="200" />
+      <param name="rgpl" value="SOLID" />
+      <param name="rgpu" value="" />
+      <param name="rgsm" value="child-1" />
+      <param name="suppressHeader" value="false" />
+      <output name="output" file="bwa_wrapper_out6.sam" ftype="sam" sort="True" lines_diff="2" />
+    </test>
+    <test>
+      <!--
+      BWA commands:
+      cp test-data/chr_m.fasta chr_m.fasta
+      bwa index -c -a is chr_m.fasta
+      bwa aln -n 0.04 -o 1 -e -1 -d 16 -i 5 -k 2 -t 4 -M 3 -O 11 -E 4 -R -N -c chr_m.fasta test-data/bwa_wrapper_in5.fastqcssanger > bwa_wrapper_out7a.sai
+      bwa aln -n 0.04 -o 1 -e -1 -d 16 -i 5 -k 2 -t 4 -M 3 -O 11 -E 4 -R -N -c chr_m.fasta test-data/bwa_wrapper_in6.fastqcssanger > bwa_wrapper_out7b.sai
+      bwa sampe -a 100 -o 2 -n 3 -N 10 chr_m.fasta bwa_wrapper_out7a.sai bwa_wrapper_out7b.sai test-data/bwa_wrapper_in5.fastqcssanger test-data/bwa_wrapper_in6.fastqcssanger > bwa_wrapper_out7.u.sam
+      chr_m.fasta is the prefix of the index files (chr_m.fasta.amb, chr_m.fasta.ann, ...)
+      plain old sort doesn't handle underscores like python:
+      python -c "import sys; lines=file(sys.argv[1],'rb').readlines(); lines.sort(); file(sys.argv[2],'wb').write(''.join(lines))" bwa_wrapper_out7.u.sam bwa_wrapper_out7.sam
+      -->
+      <param name="refGenomeSource" value="history" />
+      <param name="ownFile" value="chr_m.fasta" />
+      <param name="sPaired" value="paired" />
+      <param name="input1" value="bwa_wrapper_in5.fastqcssanger" ftype="fastqcssanger" />
+      <param name="input2" value="bwa_wrapper_in6.fastqcssanger" ftype="fastqcssanger" />
+      <param name="source_select" value="full" />
+      <param name="maxEditDist" value="0" />  
+      <param name="fracMissingAligns" value="0.04" />
+      <param name="maxGapOpens" value="1" />
+      <param name="maxGapExtens" value="-1" />
+      <param name="disallowLongDel" value="16" />
+      <param name="disallowIndel" value="5" />
+      <param name="seed" value="-1" />
+      <param name="maxEditDistSeed" value="2" />
+      <param name="mismatchPenalty" value="3" />
+      <param name="gapOpenPenalty" value="11" />
+      <param name="gapExtensPenalty" value="4" />
+      <param name="suboptAlign" value="" />
+      <param name="noIterSearch" value="true" />
+      <param name="outputTopN" value="3" />
+      <param name="outputTopNDisc" value="10" />
+      <param name="maxInsertSize" value="100" />
+      <param name="maxOccurPairing" value="2" />
+      <param name="specReadGroup" value="no" />
+      <param name="suppressHeader" value="false" />
+      <output name="output" file="bwa_wrapper_out7.sam" ftype="sam" sort="True" lines_diff="2" />
+    </test>
+  </tests> 
+  <help>
+
+**What it does**
+
+BWA is a fast light-weighted tool that aligns relatively short sequences (queries) to a sequence database (large), such as the human reference genome. It is developed by Heng Li at the Sanger Insitute. Li H. and Durbin R. (2009) Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics, 25, 1754-60. 
+
+------
+
+**Know what you are doing**
+
+.. class:: warningmark
+
+There is no such thing (yet) as an automated gearshift in short read mapping. It is all like stick-shift driving in San Francisco. In other words = running this tool with default parameters will probably not give you meaningful results. A way to deal with this is to **understand** the parameters by carefully reading the `documentation`__ and experimenting. Fortunately, Galaxy makes experimenting easy.
+
+ .. __: http://bio-bwa.sourceforge.net/
+
+------
+
+**Input formats**
+
+BWA accepts files in Sanger FASTQ format. Use the FASTQ Groomer to prepare your files, set to either FASTQ Sanger or FASTQ Color Space Sanger as appropriate. 
+
+If you have Color Space Sanger, it must be converted to nucleotide-space first. To do this, use the Manipulate FASTQ tool under NGS: QC and manipulation, with the following settings:
+    Manipulate reads on Sequence Content, choosing Change Adapter Base, and having the text box empty.
+    Manipulate reads on Sequence Content, doing a String Translate from "01234." to "ACGTN".
+
+
+------
+
+**A Note on Built-in Reference Genomes**
+
+The default variant for all genomes is "Full", defined as all primary chromosomes (or scaffolds/contigs) including mitochondrial plus associated unmapped, plasmid, and other segments. When only one version of a genome is available in this tool, it represents the default "Full" variant. Some genomes will have more than one variant available. The "Canonical Male" or sometimes simply "Canonical" variant contains the primary chromosomes for a genome. For example a human "Canonical" variant contains chr1-chr22, chrX, chrY, and chrM. The "Canonical Female" variant contains the primary chromosomes excluding chrY.
+
+------
+
+**Outputs**
+
+The output is in SAM format, and has the following columns::
+
+    Column  Description
+  --------  --------------------------------------------------------
+  1  QNAME  Query (pair) NAME
+  2  FLAG   bitwise FLAG
+  3  RNAME  Reference sequence NAME
+  4  POS    1-based leftmost POSition/coordinate of clipped sequence
+  5  MAPQ   MAPping Quality (Phred-scaled)
+  6  CIGAR  extended CIGAR string
+  7  MRNM   Mate Reference sequence NaMe ('=' if same as RNAME)
+  8  MPOS   1-based Mate POSition
+  9  ISIZE  Inferred insert SIZE
+  10 SEQ    query SEQuence on the same strand as the reference
+  11 QUAL   query QUALity (ASCII-33 gives the Phred base quality)
+  12 OPT    variable OPTional fields in the format TAG:VTYPE:VALU
+  
+The flags are as follows::
+
+    Flag  Description
+  ------  -------------------------------------
+  0x0001  the read is paired in sequencing
+  0x0002  the read is mapped in a proper pair
+  0x0004  the query sequence itself is unmapped
+  0x0008  the mate is unmapped
+  0x0010  strand of the query (1 for reverse)
+  0x0020  strand of the mate
+  0x0040  the read is the first read in a pair
+  0x0080  the read is the second read in a pair
+  0x0100  the alignment is not primary
+
+It looks like this (scroll sideways to see the entire example)::
+
+  QNAME	FLAG	RNAME	POS	MAPQ	CIAGR	MRNM	MPOS	ISIZE	SEQ	QUAL	OPT
+  HWI-EAS91_1_30788AAXX:1:1:1761:343	4	*	0	0	*	*	0	0	AAAAAAANNAAAAAAAAAAAAAAAAAAAAAAAAAAACNNANNGAGTNGNNNNNNNGCTTCCCACAGNNCTGG	hhhhhhh;;hhhhhhhhhhh^hOhhhhghhhfhhhgh;;h;;hhhh;h;;;;;;;hhhhhhghhhh;;Phhh
+  HWI-EAS91_1_30788AAXX:1:1:1578:331	4	*	0	0	*	*	0	0	GTATAGANNAATAAGAAAAAAAAAAATGAAGACTTTCNNANNTCTGNANNNNNNNTCTTTTTTCAGNNGTAG	hhhhhhh;;hhhhhhhhhhhhhhhhhhhhhhhhhhhh;;h;;hhhh;h;;;;;;;hhhhhhhhhhh;;hhVh
+
+-------
+
+**BWA settings**
+
+All of the options have a default value. You can change any of them. All of the options in BWA have been implemented here.
+
+------
+
+**BWA parameter list**
+
+This is an exhaustive list of BWA options:
+
+For **aln**::
+
+  -n NUM  Maximum edit distance if the value is INT, or the fraction of missing
+          alignments given 2% uniform base error rate if FLOAT. In the latter
+          case, the maximum edit distance is automatically chosen for different 
+          read lengths. [0.04]
+  -o INT  Maximum number of gap opens [1]
+  -e INT  Maximum number of gap extensions, -1 for k-difference mode
+          (disallowing long gaps) [-1]
+  -d INT  Disallow a long deletion within INT bp towards the 3'-end [16]
+  -i INT  Disallow an indel within INT bp towards the ends [5]
+  -l INT  Take the first INT subsequence as seed. If INT is larger than the
+          query sequence, seeding will be disabled. For long reads, this option 
+          is typically ranged from 25 to 35 for '-k 2'. [inf]
+  -k INT  Maximum edit distance in the seed [2]
+  -t INT  Number of threads (multi-threading mode) [1]
+  -M INT  Mismatch penalty. BWA will not search for suboptimal hits with a score
+          lower than (bestScore-misMsc). [3]
+  -O INT  Gap open penalty [11]
+  -E INT  Gap extension penalty [4]
+  -c      Reverse query but not complement it, which is required for alignment
+          in the color space.
+  -R      Proceed with suboptimal alignments even if the top hit is a repeat. By
+          default, BWA only searches for suboptimal alignments if the top hit is
+          unique. Using this option has no effect on accuracy for single-end
+          reads. It is mainly designed for improving the alignment accuracy of
+          paired-end reads. However, the pairing procedure will be slowed down,
+          especially for very short reads (~32bp).
+  -N      Disable iterative search. All hits with no more than maxDiff
+          differences will be found. This mode is much slower than the default.
+
+For **samse**::
+
+  -n INT  Maximum number of alignments to output in the XA tag for reads paired
+          properly. If a read has more than INT hits, the XA tag will not be
+          written. [3]
+  -r STR  Specify the read group in a format like '@RG\tID:foo\tSM:bar' [null]
+
+For **sampe**::
+
+  -a INT  Maximum insert size for a read pair to be considered as being mapped
+          properly. Since version 0.4.5, this option is only used when there
+          are not enough good alignment to infer the distribution of insert
+          sizes. [500]
+  -n INT  Maximum number of alignments to output in the XA tag for reads paired
+          properly. If a read has more than INT hits, the XA tag will not be
+          written. [3]
+  -N INT  Maximum number of alignments to output in the XA tag for disconcordant
+          read pairs (excluding singletons). If a read has more than INT hits,
+          the XA tag will not be written. [10]
+  -o INT  Maximum occurrences of a read for pairing. A read with more
+          occurrences will be treated as a single-end read. Reducing this
+          parameter helps faster pairing. [100000]
+  -r STR  Specify the read group in a format like '@RG\tID:foo\tSM:bar' [null]
+
+For specifying the read group in **samse** or **sampe**, use the following::
+
+  @RG   Read group. Unordered multiple @RG lines are allowed. 
+  ID    Read group identifier. Each @RG line must have a unique ID. The value of
+        ID is used in the RG tags of alignment records. Must be unique among all
+        read groups in header section. Read group IDs may be modified when
+        merging SAM files in order to handle collisions. 
+  CN    Name of sequencing center producing the read. 
+  DS    Description. 
+  DT    Date the run was produced (ISO8601 date or date/time). 
+  FO    Flow order. The array of nucleotide bases that correspond to the
+        nucleotides used for each flow of each read. Multi-base flows are encoded
+        in IUPAC format, and non-nucleotide flows by various other characters.
+        Format : /\*|[ACMGRSVTWYHKDBN]+/ 
+  KS    The array of nucleotide bases that correspond to the key sequence of each read. 
+  LB    Library. 
+  PG    Programs used for processing the read group. 
+  PI    Predicted median insert size. 
+  PL    Platform/technology used to produce the reads. Valid values : CAPILLARY,
+        LS454, ILLUMINA, SOLID, HELICOS, IONTORRENT and PACBIO. 
+  PU    Platform unit (e.g. flowcell-barcode.lane for Illumina or slide for
+        SOLiD). Unique identifier. 
+  SM    Sample. Use pool name where a pool is being sequenced. 
+
+  </help>
+</tool>
+
+
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/bwa_wrapper.py	Fri Sep 28 13:53:48 2012 -0400
@@ -0,0 +1,342 @@
+#!/usr/bin/env python
+
+"""
+Runs BWA on single-end or paired-end data.
+Produces a SAM file containing the mappings.
+Works with BWA version 0.5.9.
+
+usage: bwa_wrapper.py [options]
+
+See below for options
+"""
+
+import optparse, os, shutil, subprocess, sys, tempfile
+
+def stop_err( msg ):
+    sys.stderr.write( '%s\n' % msg )
+    sys.exit()
+
+def check_is_double_encoded( fastq ):
+    # check that first read is bases, not one base followed by numbers
+    bases = [ 'A', 'C', 'G', 'T', 'a', 'c', 'g', 't', 'N' ]
+    nums = [ '0', '1', '2', '3' ]
+    for line in file( fastq, 'rb'):
+        if not line.strip() or line.startswith( '@' ):
+            continue
+        if len( [ b for b in line.strip() if b in nums ] ) > 0:
+            return False
+        elif line.strip()[0] in bases and len( [ b for b in line.strip() if b in bases ] ) == len( line.strip() ):
+            return True
+        else:
+            raise Exception, 'First line in first read does not appear to be a valid FASTQ read in either base-space or color-space'
+    raise Exception, 'There is no non-comment and non-blank line in your FASTQ file'
+
+def __main__():
+    #Parse Command Line
+    parser = optparse.OptionParser()
+    parser.add_option( '-t', '--threads', dest='threads', help='The number of threads to use' )
+    parser.add_option( '-c', '--color-space', dest='color_space', action='store_true', help='If the input files are SOLiD format' )
+    parser.add_option( '-r', '--ref', dest='ref', help='The reference genome to use or index' )
+    parser.add_option( '-f', '--input1', dest='fastq', help='The (forward) fastq file to use for the mapping' )
+    parser.add_option( '-F', '--input2', dest='rfastq', help='The reverse fastq file to use for mapping if paired-end data' )
+    parser.add_option( '-u', '--output', dest='output', help='The file to save the output (SAM format)' )
+    parser.add_option( '-g', '--genAlignType', dest='genAlignType', help='The type of pairing (single or paired)' )
+    parser.add_option( '-p', '--params', dest='params', help='Parameter setting to use (pre_set or full)' )
+    parser.add_option( '-s', '--fileSource', dest='fileSource', help='Whether to use a previously indexed reference sequence or one form history (indexed or history)' )
+    parser.add_option( '-n', '--maxEditDist', dest='maxEditDist', help='Maximum edit distance if integer' )
+    parser.add_option( '-m', '--fracMissingAligns', dest='fracMissingAligns', help='Fraction of missing alignments given 2% uniform base error rate if fraction' )
+    parser.add_option( '-o', '--maxGapOpens', dest='maxGapOpens', help='Maximum number of gap opens' )
+    parser.add_option( '-e', '--maxGapExtens', dest='maxGapExtens', help='Maximum number of gap extensions' )
+    parser.add_option( '-d', '--disallowLongDel', dest='disallowLongDel', help='Disallow a long deletion within specified bps' )
+    parser.add_option( '-i', '--disallowIndel', dest='disallowIndel', help='Disallow indel within specified bps' )
+    parser.add_option( '-l', '--seed', dest='seed', help='Take the first specified subsequences' )
+    parser.add_option( '-k', '--maxEditDistSeed', dest='maxEditDistSeed', help='Maximum edit distance to the seed' )
+    parser.add_option( '-M', '--mismatchPenalty', dest='mismatchPenalty', help='Mismatch penalty' )
+    parser.add_option( '-O', '--gapOpenPenalty', dest='gapOpenPenalty', help='Gap open penalty' )
+    parser.add_option( '-E', '--gapExtensPenalty', dest='gapExtensPenalty', help='Gap extension penalty' )
+    parser.add_option( '-R', '--suboptAlign', dest='suboptAlign', default=None, help='Proceed with suboptimal alignments even if the top hit is a repeat' )
+    parser.add_option( '-N', '--noIterSearch', dest='noIterSearch', help='Disable iterative search' )
+    parser.add_option( '-T', '--outputTopN', dest='outputTopN', help='Maximum number of alignments to output in the XA tag for reads paired properly' )
+    parser.add_option( '', '--outputTopNDisc', dest='outputTopNDisc', help='Maximum number of alignments to output in the XA tag for disconcordant read pairs (excluding singletons)' )
+    parser.add_option( '-S', '--maxInsertSize', dest='maxInsertSize', help='Maximum insert size for a read pair to be considered mapped good' )
+    parser.add_option( '-P', '--maxOccurPairing', dest='maxOccurPairing', help='Maximum occurrences of a read for pairings' )
+    parser.add_option( '', '--rgid', dest='rgid', help='Read group identifier' )
+    parser.add_option( '', '--rgcn', dest='rgcn', help='Sequencing center that produced the read' )
+    parser.add_option( '', '--rgds', dest='rgds', help='Description' )
+    parser.add_option( '', '--rgdt', dest='rgdt', help='Date that run was produced (ISO8601 format date or date/time, like YYYY-MM-DD)' )
+    parser.add_option( '', '--rgfo', dest='rgfo', help='Flow order' )
+    parser.add_option( '', '--rgks', dest='rgks', help='The array of nucleotide bases that correspond to the key sequence of each read' )
+    parser.add_option( '', '--rglb', dest='rglb', help='Library name' )
+    parser.add_option( '', '--rgpg', dest='rgpg', help='Programs used for processing the read group' )
+    parser.add_option( '', '--rgpi', dest='rgpi', help='Predicted median insert size' )
+    parser.add_option( '', '--rgpl', dest='rgpl', choices=[ 'CAPILLARY', 'LS454', 'ILLUMINA', 'SOLID', 'HELICOS', 'IONTORRENT' and 'PACBIO' ], help='Platform/technology used to produce the reads' )
+    parser.add_option( '', '--rgpu', dest='rgpu', help='Platform unit (e.g. flowcell-barcode.lane for Illumina or slide for SOLiD)' )
+    parser.add_option( '', '--rgsm', dest='rgsm', help='Sample' )
+    parser.add_option( '-D', '--dbkey', dest='dbkey', help='Dbkey for reference genome' )
+    parser.add_option( '-X', '--do_not_build_index', dest='do_not_build_index', action='store_true', help="Don't build index" )
+    parser.add_option( '-H', '--suppressHeader', dest='suppressHeader', help='Suppress header' )
+    parser.add_option( '-I', '--illumina1.3', dest='illumina13qual', help='Input FASTQ files have Illuina 1.3 quality scores' )
+    (options, args) = parser.parse_args()
+
+    # output version # of tool
+    try:
+        tmp = tempfile.NamedTemporaryFile().name
+        tmp_stdout = open( tmp, 'wb' )
+        proc = subprocess.Popen( args='bwa 2>&1', shell=True, stdout=tmp_stdout )
+        tmp_stdout.close()
+        returncode = proc.wait()
+        stdout = None
+        for line in open( tmp_stdout.name, 'rb' ):
+            if line.lower().find( 'version' ) >= 0:
+                stdout = line.strip()
+                break
+        if stdout:
+            sys.stdout.write( 'BWA %s\n' % stdout )
+        else:
+            raise Exception
+    except:
+        sys.stdout.write( 'Could not determine BWA version\n' )
+
+    # check for color space fastq that's not double-encoded and exit if appropriate
+    if options.color_space:
+        if not check_is_double_encoded( options.fastq ):
+            stop_err( 'Your file must be double-encoded (it must be converted from "numbers" to "bases"). See the help section for details' )
+        if options.genAlignType == 'paired':
+            if not check_is_double_encoded( options.rfastq ):
+                stop_err( 'Your reverse reads file must also be double-encoded (it must be converted from "numbers" to "bases"). See the help section for details' )
+
+    fastq = options.fastq
+    if options.rfastq:
+         rfastq = options.rfastq
+
+    # set color space variable
+    if options.color_space:
+        color_space = '-c'
+    else:
+        color_space = ''
+
+    # make temp directory for placement of indices
+    tmp_index_dir = tempfile.mkdtemp()
+    tmp_dir = tempfile.mkdtemp()
+    # index if necessary
+    if options.fileSource == 'history' and not options.do_not_build_index:
+        ref_file = tempfile.NamedTemporaryFile( dir=tmp_index_dir )
+        ref_file_name = ref_file.name
+        ref_file.close()
+        os.symlink( options.ref, ref_file_name )
+        # determine which indexing algorithm to use, based on size
+        try:
+            size = os.stat( options.ref ).st_size
+            if size <= 2**30: 
+                indexingAlg = 'is'
+            else:
+                indexingAlg = 'bwtsw'
+        except:
+            indexingAlg = 'is'
+        indexing_cmds = '%s -a %s' % ( color_space, indexingAlg )
+        cmd1 = 'bwa index %s %s' % ( indexing_cmds, ref_file_name )
+        try:
+            tmp = tempfile.NamedTemporaryFile( dir=tmp_index_dir ).name
+            tmp_stderr = open( tmp, 'wb' )
+            proc = subprocess.Popen( args=cmd1, shell=True, cwd=tmp_index_dir, stderr=tmp_stderr.fileno() )
+            returncode = proc.wait()
+            tmp_stderr.close()
+            # get stderr, allowing for case where it's very large
+            tmp_stderr = open( tmp, 'rb' )
+            stderr = ''
+            buffsize = 1048576
+            try:
+                while True:
+                    stderr += tmp_stderr.read( buffsize )
+                    if not stderr or len( stderr ) % buffsize != 0:
+                        break
+            except OverflowError:
+                pass
+            tmp_stderr.close()
+            if returncode != 0:
+                raise Exception, stderr
+        except Exception, e:
+            # clean up temp dirs
+            if os.path.exists( tmp_index_dir ):
+                shutil.rmtree( tmp_index_dir )
+            if os.path.exists( tmp_dir ):
+                shutil.rmtree( tmp_dir )
+            stop_err( 'Error indexing reference sequence. ' + str( e ) )
+    else:
+        ref_file_name = options.ref
+    if options.illumina13qual:
+        illumina_quals = "-I"
+    else:
+        illumina_quals = ""
+
+    # set up aligning and generate aligning command options
+    if options.params == 'pre_set':
+        aligning_cmds = '-t %s %s %s' % ( options.threads, color_space, illumina_quals )
+        gen_alignment_cmds = ''
+    else:
+        if options.maxEditDist != '0':
+            editDist = options.maxEditDist
+        else:
+            editDist = options.fracMissingAligns
+        if options.seed != '-1':
+            seed = '-l %s' % options.seed
+        else:
+            seed = ''
+        if options.suboptAlign:
+            suboptAlign = '-R "%s"' % ( options.suboptAlign )
+        else:
+            suboptAlign = ''
+        if options.noIterSearch == 'true':
+            noIterSearch = '-N'
+        else:
+            noIterSearch = ''
+        aligning_cmds = '-n %s -o %s -e %s -d %s -i %s %s -k %s -t %s -M %s -O %s -E %s %s %s %s %s' % \
+                        ( editDist, options.maxGapOpens, options.maxGapExtens, options.disallowLongDel,
+                          options.disallowIndel, seed, options.maxEditDistSeed, options.threads,
+                          options.mismatchPenalty, options.gapOpenPenalty, options.gapExtensPenalty,
+                          suboptAlign, noIterSearch, color_space, illumina_quals )
+        if options.genAlignType == 'paired':
+            gen_alignment_cmds = '-a %s -o %s' % ( options.maxInsertSize, options.maxOccurPairing )
+            if options.outputTopNDisc:
+                gen_alignment_cmds += ' -N %s' % options.outputTopNDisc
+        else:
+            gen_alignment_cmds = ''
+        if options.rgid:
+            if not options.rglb or not options.rgpl or not options.rgsm:
+                stop_err( 'If you want to specify read groups, you must include the ID, LB, PL, and SM tags.' )
+            readGroup = '@RG\tID:%s\tLB:%s\tPL:%s\tSM:%s' % ( options.rgid, options.rglb, options.rgpl, options.rgsm )
+            if options.rgcn:
+                readGroup += '\tCN:%s' % options.rgcn
+            if options.rgds:
+                readGroup += '\tDS:%s' % options.rgds
+            if options.rgdt:
+                readGroup += '\tDT:%s' % options.rgdt
+            if options.rgfo:
+                readGroup += '\tFO:%s' % options.rgfo
+            if options.rgks:
+                readGroup += '\tKS:%s' % options.rgks
+            if options.rgpg:
+                readGroup += '\tPG:%s' % options.rgpg
+            if options.rgpi:
+                readGroup += '\tPI:%s' % options.rgpi
+            if options.rgpu:
+                readGroup += '\tPU:%s' % options.rgpu
+            gen_alignment_cmds += ' -r "%s"' % readGroup
+        if options.outputTopN:
+            gen_alignment_cmds += ' -n %s' % options.outputTopN
+    # set up output files
+    tmp_align_out = tempfile.NamedTemporaryFile( dir=tmp_dir )
+    tmp_align_out_name = tmp_align_out.name
+    tmp_align_out.close()
+    tmp_align_out2 = tempfile.NamedTemporaryFile( dir=tmp_dir )
+    tmp_align_out2_name = tmp_align_out2.name
+    tmp_align_out2.close()
+    # prepare actual aligning and generate aligning commands
+    cmd2 = 'bwa aln %s %s %s > %s' % ( aligning_cmds, ref_file_name, fastq, tmp_align_out_name )
+    cmd2b = ''
+    if options.genAlignType == 'paired':
+        cmd2b = 'bwa aln %s %s %s > %s' % ( aligning_cmds, ref_file_name, rfastq, tmp_align_out2_name )
+        cmd3 = 'bwa sampe %s %s %s %s %s %s >> %s' % ( gen_alignment_cmds, ref_file_name, tmp_align_out_name, tmp_align_out2_name, fastq, rfastq, options.output )
+    else:
+        cmd3 = 'bwa samse %s %s %s %s >> %s' % ( gen_alignment_cmds, ref_file_name, tmp_align_out_name, fastq, options.output )
+    # perform alignments
+    buffsize = 1048576
+    try:
+        # need to nest try-except in try-finally to handle 2.4
+        try:
+            # align
+            try:
+                tmp = tempfile.NamedTemporaryFile( dir=tmp_dir ).name
+                tmp_stderr = open( tmp, 'wb' )
+                proc = subprocess.Popen( args=cmd2, shell=True, cwd=tmp_dir, stderr=tmp_stderr.fileno() )
+                returncode = proc.wait()
+                tmp_stderr.close()
+                # get stderr, allowing for case where it's very large
+                tmp_stderr = open( tmp, 'rb' )
+                stderr = ''
+                try:
+                    while True:
+                        stderr += tmp_stderr.read( buffsize )
+                        if not stderr or len( stderr ) % buffsize != 0:
+                            break
+                except OverflowError:
+                    pass
+                tmp_stderr.close()
+                if returncode != 0:
+                    raise Exception, stderr
+            except Exception, e:
+                raise Exception, 'Error aligning sequence. ' + str( e )
+            # and again if paired data
+            try:
+                if cmd2b:
+                    tmp = tempfile.NamedTemporaryFile( dir=tmp_dir ).name
+                    tmp_stderr = open( tmp, 'wb' )
+                    proc = subprocess.Popen( args=cmd2b, shell=True, cwd=tmp_dir, stderr=tmp_stderr.fileno() )
+                    returncode = proc.wait()
+                    tmp_stderr.close()
+                    # get stderr, allowing for case where it's very large
+                    tmp_stderr = open( tmp, 'rb' )
+                    stderr = ''
+                    try:
+                        while True:
+                            stderr += tmp_stderr.read( buffsize )
+                            if not stderr or len( stderr ) % buffsize != 0:
+                                break
+                    except OverflowError:
+                        pass
+                    tmp_stderr.close()
+                    if returncode != 0:
+                        raise Exception, stderr
+            except Exception, e:
+                raise Exception, 'Error aligning second sequence. ' + str( e )
+            # generate align
+            try:
+                tmp = tempfile.NamedTemporaryFile( dir=tmp_dir ).name
+                tmp_stderr = open( tmp, 'wb' )
+                proc = subprocess.Popen( args=cmd3, shell=True, cwd=tmp_dir, stderr=tmp_stderr.fileno() )
+                returncode = proc.wait()
+                tmp_stderr.close()
+                # get stderr, allowing for case where it's very large
+                tmp_stderr = open( tmp, 'rb' )
+                stderr = ''
+                try:
+                    while True:
+                        stderr += tmp_stderr.read( buffsize )
+                        if not stderr or len( stderr ) % buffsize != 0:
+                            break
+                except OverflowError:
+                    pass
+                tmp_stderr.close()
+                if returncode != 0:
+                    raise Exception, stderr
+            except Exception, e:
+                raise Exception, 'Error generating alignments. ' + str( e ) 
+            # remove header if necessary
+            if options.suppressHeader == 'true':
+                tmp_out = tempfile.NamedTemporaryFile( dir=tmp_dir)
+                tmp_out_name = tmp_out.name
+                tmp_out.close()
+                try:
+                    shutil.move( options.output, tmp_out_name )
+                except Exception, e:
+                    raise Exception, 'Error moving output file before removing headers. ' + str( e )
+                fout = file( options.output, 'w' )
+                for line in file( tmp_out.name, 'r' ):
+                    if not ( line.startswith( '@HD' ) or line.startswith( '@SQ' ) or line.startswith( '@RG' ) or line.startswith( '@PG' ) or line.startswith( '@CO' ) ):
+                        fout.write( line )
+                fout.close()
+            # check that there are results in the output file
+            if os.path.getsize( options.output ) > 0:
+                sys.stdout.write( 'BWA run on %s-end data' % options.genAlignType )
+            else:
+                raise Exception, 'The output file is empty. You may simply have no matches, or there may be an error with your input file or settings.'
+        except Exception, e:
+            stop_err( 'The alignment failed.\n' + str( e ) )
+    finally:
+        # clean up temp dir
+        if os.path.exists( tmp_index_dir ):
+            shutil.rmtree( tmp_index_dir )
+        if os.path.exists( tmp_dir ):
+            shutil.rmtree( tmp_dir )
+
+if __name__=="__main__": __main__()
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/bwa_wrapper.xml	Fri Sep 28 13:53:48 2012 -0400
@@ -0,0 +1,474 @@
+<tool id="bwa_wrapper" name="Map with BWA for Illumina" version="1.2.3">
+  <requirements>
+    <requirement type="package" version="0.5.9">bwa</requirement>
+  </requirements>
+  <description></description>
+  <parallelism method="basic"></parallelism>
+  <command interpreter="python">
+    bwa_wrapper.py 
+      --threads="4"
+
+      #if $input1.ext == "fastqillumina":
+            --illumina1.3
+      #end if
+
+      ## reference source
+      --fileSource=$genomeSource.refGenomeSource
+      #if $genomeSource.refGenomeSource == "history":
+        ##build index on the fly
+        --ref="${genomeSource.ownFile}"
+        --dbkey=$dbkey
+      #else:
+        ##use precomputed indexes
+        --ref="${genomeSource.indices.fields.path}"
+        --do_not_build_index
+      #end if
+
+      ## input file(s)
+      --input1=$paired.input1
+      #if $paired.sPaired == "paired":
+        --input2=$paired.input2
+      #end if
+
+      ## output file
+      --output=$output
+
+      ## run parameters
+      --genAlignType=$paired.sPaired
+      --params=$params.source_select
+      #if $params.source_select != "pre_set":
+        --maxEditDist=$params.maxEditDist
+        --fracMissingAligns=$params.fracMissingAligns
+        --maxGapOpens=$params.maxGapOpens
+        --maxGapExtens=$params.maxGapExtens
+        --disallowLongDel=$params.disallowLongDel
+        --disallowIndel=$params.disallowIndel
+        --seed=$params.seed
+        --maxEditDistSeed=$params.maxEditDistSeed
+        --mismatchPenalty=$params.mismatchPenalty
+        --gapOpenPenalty=$params.gapOpenPenalty
+        --gapExtensPenalty=$params.gapExtensPenalty
+        --suboptAlign="${params.suboptAlign}"
+        --noIterSearch=$params.noIterSearch
+        --outputTopN=$params.outputTopN
+        --outputTopNDisc=$params.outputTopNDisc
+        --maxInsertSize=$params.maxInsertSize
+        --maxOccurPairing=$params.maxOccurPairing
+        #if $params.readGroup.specReadGroup == "yes"
+          --rgid="$params.readGroup.rgid"
+          --rgcn="$params.readGroup.rgcn"
+          --rgds="$params.readGroup.rgds"
+          --rgdt="$params.readGroup.rgdt"
+          --rgfo="$params.readGroup.rgfo"
+          --rgks="$params.readGroup.rgks"
+          --rglb="$params.readGroup.rglb"
+          --rgpg="$params.readGroup.rgpg"
+          --rgpi="$params.readGroup.rgpi"
+          --rgpl="$params.readGroup.rgpl"
+          --rgpu="$params.readGroup.rgpu"
+          --rgsm="$params.readGroup.rgsm"
+        #end if
+      #end if
+
+      ## suppress output SAM header
+      --suppressHeader=$suppressHeader
+  </command>
+  <inputs>
+    <conditional name="genomeSource">
+      <param name="refGenomeSource" type="select" label="Will you select a reference genome from your history or use a built-in index?">
+        <option value="indexed">Use a built-in index</option>
+        <option value="history">Use one from the history</option>
+      </param>
+      <when value="indexed">
+        <param name="indices" type="select" label="Select a reference genome">
+          <options from_data_table="bwa_indexes">
+            <filter type="sort_by" column="2" />
+            <validator type="no_options" message="No indexes are available" />
+          </options>
+        </param>
+      </when>
+      <when value="history">
+        <param name="ownFile" type="data" format="fasta" metadata_name="dbkey" label="Select a reference from history" />
+      </when>
+    </conditional>
+    <conditional name="paired">
+      <param name="sPaired" type="select" label="Is this library mate-paired?">
+        <option value="single">Single-end</option>
+        <option value="paired">Paired-end</option>
+      </param>
+      <when value="single">
+        <param name="input1" type="data" format="fastqsanger,fastqillumina" label="FASTQ file" help="FASTQ with either Sanger-scaled quality values (fastqsanger) or Illumina-scaled quality values (fastqillumina)" />
+      </when>
+      <when value="paired">
+        <param name="input1" type="data" format="fastqsanger,fastqillumina" label="Forward FASTQ file" help="FASTQ with either Sanger-scaled quality values (fastqsanger) or Illumina-scaled quality values (fastqillumina)" />
+        <param name="input2" type="data" format="fastqsanger,fastqillumina" label="Reverse FASTQ file" help="FASTQ with either Sanger-scaled quality values (fastqsanger) or Illumina-scaled quality values (fastqillumina)" />
+      </when>
+    </conditional>
+    <conditional name="params">
+      <param name="source_select" type="select" label="BWA settings to use" help="For most mapping needs use Commonly Used settings. If you want full control use Full Parameter List">
+        <option value="pre_set">Commonly Used</option>
+        <option value="full">Full Parameter List</option>
+      </param>
+      <when value="pre_set" />
+      <when value="full">
+        <param name="maxEditDist" type="integer" value="0" label="Maximum edit distance (aln -n)" help="Enter this value OR a fraction of missing alignments, not both" />
+        <param name="fracMissingAligns" type="float" value="0.04" label="Fraction of missing alignments given 2% uniform base error rate (aln -n)" help="Enter this value OR maximum edit distance, not both" />
+        <param name="maxGapOpens" type="integer" value="1" label="Maximum number of gap opens (aln -o)" />
+        <param name="maxGapExtens" type="integer" value="-1" label="Maximum number of gap extensions (aln -e)" help="-1 for k-difference mode (disallowing long gaps)" />
+        <param name="disallowLongDel" type="integer" value="16" label="Disallow long deletion within [value] bp towards the 3'-end (aln -d)" />
+        <param name="disallowIndel" type="integer" value="5" label="Disallow insertion/deletion within [value] bp towards the end (aln -i)" />
+        <param name="seed" type="integer" value="-1" label="Number of first subsequences to take as seed (aln -l)" help="Enter -1 for infinity" />
+        <param name="maxEditDistSeed" type="integer" value="2" label="Maximum edit distance in the seed (aln -k)" />
+        <param name="mismatchPenalty" type="integer" value="3" label="Mismatch penalty (aln -M)" help="BWA will not search for suboptimal hits with a score lower than [value]" />
+        <param name="gapOpenPenalty" type="integer" value="11" label="Gap open penalty (aln -O)" />
+        <param name="gapExtensPenalty" type="integer" value="4" label="Gap extension penalty (aln -E)" />
+        <param name="suboptAlign" type="integer" optional="True" label="Proceed with suboptimal alignments if there are no more than INT equally best hits. (aln -R)" help="For paired-end reads only. By default, BWA only searches for suboptimal alignments if the top hit is unique. Using this option has no effect on accuracy for single-end reads. It is mainly designed for improving the alignment accuracy of paired-end reads. However, the pairing procedure will be slowed down, especially for very short reads (~32bp)" />
+        <param name="noIterSearch" type="boolean" truevalue="true" falsevalue="false" checked="no" label="Disable iterative search (aln -N)" help="All hits with no more than maxDiff differences will be found. This mode is much slower than the default" />
+        <param name="outputTopN" type="integer" value="3" label="Maximum number of alignments to output in the XA tag for reads paired properly (samse/sampe -n)" help="If a read has more than INT hits, the XA tag will not be written" />
+        <param name="outputTopNDisc" type="integer" value="10" label="Maximum number of alignments to output in the XA tag for disconcordant read pairs (excluding singletons) (sampe -N)" help="For paired-end reads only. If a read has more than INT hits, the XA tag will not be written" />
+        <param name="maxInsertSize" type="integer" value="500" label="Maximum insert size for a read pair to be considered as being mapped properly (sampe -a)" help="For paired-end reads only. Only used when there are not enough good alignments to infer the distribution of insert sizes" />
+        <param name="maxOccurPairing" type="integer" value="100000" label="Maximum occurrences of a read for pairing (sampe -o)" help="For paired-end reads only. A read with more occurrences will be treated as a single-end read. Reducing this parameter helps faster pairing" />
+        <conditional name="readGroup">
+          <param name="specReadGroup" type="select" label="Specify the read group for this file? (samse/sampe -r)">
+            <option value="yes">Yes</option>
+            <option value="no" selected="True">No</option>
+          </param>
+          <when value="yes">
+            <param name="rgid" type="text" size="25" label="Read group identifier (ID). Each @RG line must have a unique ID. The value of ID is used in the RG 
+tags of alignment records. Must be unique among all read groups in header section." help="Required if RG specified. Read group 
+IDs may be modified when merging SAM files in order to handle collisions." />
+            <param name="rgcn" type="text" size="25" label="Sequencing center that produced the read (CN)" help="Optional" />
+            <param name="rgds" type="text" size="25" label="Description (DS)" help="Optional" />
+            <param name="rgdt" type="text" size="25" label="Date that run was produced (DT)" help="Optional. ISO8601 format date or date/time, like YYYY-MM-DD" />
+            <param name="rgfo" type="text" size="25" label="Flow order (FO). The array of nucleotide bases that correspond to the nucleotides used for each 
+flow of each read." help="Optional. Multi-base flows are encoded in IUPAC format, and non-nucleotide flows by 
+various other characters. Format : /\*|[ACMGRSVTWYHKDBN]+/" />
+            <param name="rgks" type="text" size="25" label="The array of nucleotide bases that correspond to the key sequence of each read (KS)" help="Optional" />
+            <param name="rglb" type="text" size="25" label="Library name (LB)" help="Required if RG specified" />
+            <param name="rgpg" type="text" size="25" label="Programs used for processing the read group (PG)" help="Optional" />
+            <param name="rgpi" type="text" size="25" label="Predicted median insert size (PI)" help="Optional" />
+            <param name="rgpl" type="text" size="25" label="Platform/technology used to produce the reads (PL)" help="Required if RG specified. Valid values : CAPILLARY, LS454, ILLUMINA, 
+SOLID, HELICOS, IONTORRENT and PACBIO" />
+            <param name="rgpu" type="text" size="25" label="Platform unit (PU)" help="Optional. Unique identifier (e.g. flowcell-barcode.lane for Illumina or slide for SOLiD)" />
+            <param name="rgsm" type="text" size="25" label="Sample (SM)" help="Required if RG specified. Use pool name where a pool is being sequenced" />
+          </when>
+          <when value="no" />
+        </conditional>
+      </when>
+    </conditional>
+    <param name="suppressHeader" type="boolean" truevalue="true" falsevalue="false" checked="False" label="Suppress the header in the output SAM file" help="BWA produces SAM with several lines of header information" />
+  </inputs>
+  <outputs>
+    <data format="sam" name="output" label="${tool.name} on ${on_string}: mapped reads">
+      <actions>
+        <conditional name="genomeSource.refGenomeSource">
+          <when value="indexed">
+            <action type="metadata" name="dbkey">
+              <option type="from_data_table" name="bwa_indexes" column="1">
+                <filter type="param_value" column="0" value="#" compare="startswith" keep="False"/>
+                <filter type="param_value" ref="genomeSource.indices" column="0"/>
+              </option>
+            </action>
+          </when>
+          <when value="history">
+            <action type="metadata" name="dbkey">
+              <option type="from_param" name="genomeSource.ownFile" param_attribute="dbkey" />
+            </action>
+          </when>
+        </conditional>
+      </actions>
+    </data>
+  </outputs>
+  <tests>
+    <test>
+      <!--
+      BWA commands:
+      bwa aln -t 4 phiX.fasta test-data/bwa_wrapper_in1.fastqsanger > bwa_wrapper_out1.sai
+      bwa samse phiX.fasta bwa_wrapper_out1.sai test-data/bwa_wrapper_in1.fastqsanger > bwa_wrapper_out1.sam
+      phiX.fasta is the prefix for the reference files (phiX.fasta.amb, phiX.fasta.ann, phiX.fasta.bwt, ...)
+      remove the comment lines (beginning with '@') from the resulting sam file
+      plain old sort doesn't handle underscores like python:
+      python -c "import sys; lines=file(sys.argv[1],'rb').readlines(); lines.sort(); file(sys.argv[2],'wb').write(''.join(lines))" bwa_wrapper_out1.u.sam bwa_wrapper_out1.sam
+      -->
+      <param name="refGenomeSource" value="indexed" />
+      <param name="indices" value="phiX" />
+      <param name="sPaired" value="single" />
+      <param name="input1" value="bwa_wrapper_in1.fastqsanger" ftype="fastqsanger" />
+      <param name="source_select" value="pre_set" />
+      <param name="suppressHeader" value="true" />
+      <output name="output" file="bwa_wrapper_out1.sam" ftype="sam" sort="True" />
+    </test>
+    <test>
+      <!--
+      BWA commands:
+      cp test-data/phiX.fasta phiX.fasta
+      bwa index -a is phiX.fasta
+      bwa aln -n 0.04 -o 1 -e -1 -d 16 -i 5 -k 2 -t 4 -M 3 -O 11 -E 4 -R -N phiX.fasta test-data/bwa_wrapper_in1.fastqsanger > bwa_wrapper_out2.sai
+      bwa samse -n 3 phiX.fasta bwa_wrapper_out2.sai test-data/bwa_wrapper_in1.fastqsanger > bwa_wrapper_out2.u.sam
+      phiX.fasta is the prefix for the reference files (phiX.fasta.amb, phiX.fasta.ann, phiX.fasta.bwt, ...)
+      remove the comment lines (beginning with '@') from the resulting sam file
+      plain old sort doesn't handle underscores like python:
+      python -c "import sys; lines=file(sys.argv[1],'rb').readlines(); lines.sort(); file(sys.argv[2],'wb').write(''.join(lines))" bwa_wrapper_out2.u.sam bwa_wrapper_out2.sam
+      -->
+      <param name="refGenomeSource" value="history" />
+      <param name="ownFile" value="phiX.fasta" />
+      <param name="sPaired" value="single" />
+      <param name="input1" value="bwa_wrapper_in1.fastqsanger" ftype="fastqsanger" />
+      <param name="source_select" value="full" />
+      <param name="maxEditDist" value="0" />  
+      <param name="fracMissingAligns" value="0.04" />
+      <param name="maxGapOpens" value="1" />
+      <param name="maxGapExtens" value="-1" />
+      <param name="disallowLongDel" value="16" />
+      <param name="disallowIndel" value="5" />
+      <param name="seed" value="-1" />
+      <param name="maxEditDistSeed" value="2" />
+      <param name="mismatchPenalty" value="3" />
+      <param name="gapOpenPenalty" value="11" />
+      <param name="gapExtensPenalty" value="4" />
+      <param name="suboptAlign" value="" />
+      <param name="noIterSearch" value="true" />
+      <param name="outputTopN" value="3" />
+      <param name="outputTopNDisc" value="10" />
+      <param name="maxInsertSize" value="500" />
+      <param name="maxOccurPairing" value="100000" />
+      <param name="specReadGroup" value="no" />
+      <param name="suppressHeader" value="true" />
+      <output name="output" file="bwa_wrapper_out2.sam" ftype="sam" sort="True" />
+    </test>
+    <test>
+      <!--
+      BWA commands:
+      bwa aln -n 0.04 -o 1 -e -1 -d 16 -i 5 -k 2 -t 4 -M 3 -O 11 -E 4 -R -N phiX.fasta test-data/bwa_wrapper_in2.fastqsanger > bwa_wrapper_out3a.sai
+      bwa aln -n 0.04 -o 1 -e -1 -d 16 -i 5 -k 2 -t 4 -M 3 -O 11 -E 4 -R -N phiX.fasta test-data/bwa_wrapper_in3.fastqsanger > bwa_wrapper_out3b.sai
+      bwa sampe -a 500 -o 100000 -n 3 -N 10 -r "@RG\tID:abcdefg\tDS:descrip\tDT:2010-11-01\tLB:lib-mom-A\tPI:400\tPL:ILLUMINA\tSM:mom" phiX.fasta bwa_wrapper_out3a.sai bwa_wrapper_out3b.sai test-data/bwa_wrapper_in2.fastqsanger test-data/bwa_wrapper_in3.fastqsanger > bwa_wrapper_out3.u.sam
+      phiX.fasta is the prefix for the reference
+      plain old sort doesn't handle underscores like python:
+      python -c "import sys; lines=file(sys.argv[1],'rb').readlines(); lines.sort(); file(sys.argv[2],'wb').write(''.join(lines))" bwa_wrapper_out3.u.sam bwa_wrapper_out3.sam
+      -->
+      <param name="refGenomeSource" value="indexed" />
+      <param name="indices" value="phiX" />
+      <param name="sPaired" value="paired" />
+      <param name="input1" value="bwa_wrapper_in2.fastqsanger" ftype="fastqsanger" />
+      <param name="input2" value="bwa_wrapper_in3.fastqsanger" ftype="fastqsanger" />
+      <param name="source_select" value="full" />
+      <param name="maxEditDist" value="0" />
+      <param name="fracMissingAligns" value="0.04" />
+      <param name="maxGapOpens" value="1" />
+      <param name="maxGapExtens" value="-1" />
+      <param name="disallowLongDel" value="16" />
+      <param name="disallowIndel" value="5" />
+      <param name="seed" value="-1" />
+      <param name="maxEditDistSeed" value="2" />
+      <param name="mismatchPenalty" value="3" />
+      <param name="gapOpenPenalty" value="11" />
+      <param name="gapExtensPenalty" value="4" />
+      <param name="suboptAlign" value="" />
+      <param name="noIterSearch" value="true" />
+      <param name="outputTopN" value="3" />
+      <param name="outputTopNDisc" value="10" />
+      <param name="maxInsertSize" value="500" />
+      <param name="maxOccurPairing" value="100000" />
+      <param name="specReadGroup" value="yes" />
+      <param name="rgid" value="abcdefg" />
+      <param name="rgcn" value="" />
+      <param name="rgds" value="descrip" />
+      <param name="rgdt" value="2010-11-01" />
+      <param name="rgfo" value="" />
+      <param name="rgks" value="" />
+      <param name="rglb" value="lib-mom-A" />
+      <param name="rgpg" value="" />
+      <param name="rgpi" value="400" />
+      <param name="rgpl" value="ILLUMINA" />
+      <param name="rgpu" value="" />
+      <param name="rgsm" value="mom" />
+      <param name="suppressHeader" value="false" />
+      <output name="output" file="bwa_wrapper_out3.sam" ftype="sam" sort="True" lines_diff="2" />
+    </test>
+    <test>
+      <!--
+      BWA commands:
+      cp test-data/phiX.fasta phiX.fasta
+      bwa index -a is phiX.fasta
+      bwa aln -t 4 phiX.fasta test-data/bwa_wrapper_in2.fastqsanger > bwa_wrapper_out8a.sai
+      bwa aln -t 4 phiX.fasta test-data/bwa_wrapper_in3.fastqsanger > bwa_wrapper_out8b.sai
+      bwa sampe -a 500 -o 100000 phiX.fasta bwa_wrapper_out8a.sai bwa_wrapper_out8b.sai test-data/bwa_wrapper_in2.fastqsanger test-data/bwa_wrapper_in3.fastqsanger > bwa_wrapper_out8.u.sam
+      phiX.fa is the prefix for the reference
+      remove the comment lines (beginning with '@') from the resulting sam file
+      python -c "import sys; lines=file(sys.argv[1],'rb').readlines(); lines.sort(); file(sys.argv[2],'wb').write(''.join(lines))" bwa_wrapper_out8.u.sam bwa_wrapper_out8.sam
+      -->
+      <param name="refGenomeSource" value="history" />
+      <!-- this is the backwards-compatible "unique value" for this index, not an actual path -->
+      <param name="ownFile" value="phiX.fasta" />
+      <param name="sPaired" value="paired" />
+      <param name="input1" value="bwa_wrapper_in2.fastqsanger" ftype="fastqsanger" />
+      <param name="input2" value="bwa_wrapper_in3.fastqsanger" ftype="fastqsanger" />
+      <param name="source_select" value="preSet" />
+      <param name="suppressHeader" value="true" />
+      <output name="output" file="bwa_wrapper_out8.sam" ftype="sam" sort="True" />
+    </test>
+  </tests> 
+  <help>
+
+**What it does**
+
+BWA is a fast light-weighted tool that aligns relatively short sequences (queries) to a sequence database (large), such as the human reference genome. It is developed by Heng Li at the Sanger Insitute. Li H. and Durbin R. (2009) Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics, 25, 1754-60. 
+
+------
+
+**Know what you are doing**
+
+.. class:: warningmark
+
+There is no such thing (yet) as an automated gearshift in short read mapping. It is all like stick-shift driving in San Francisco. In other words = running this tool with default parameters will probably not give you meaningful results. A way to deal with this is to **understand** the parameters by carefully reading the `documentation`__ and experimenting. Fortunately, Galaxy makes experimenting easy.
+
+ .. __: http://bio-bwa.sourceforge.net/
+
+------
+
+**Input formats**
+
+BWA accepts files in either Sanger FASTQ format (galaxy type *fastqsanger*) or Illumina FASTQ format (galaxy type *fastqillumina*). Use the FASTQ Groomer to prepare your files.
+
+------
+
+**A Note on Built-in Reference Genomes**
+
+The default variant for all genomes is "Full", defined as all primary chromosomes (or scaffolds/contigs) including mitochondrial plus associated unmapped, plasmid, and other segments. When only one version of a genome is available in this tool, it represents the default "Full" variant. Some genomes will have more than one variant available. The "Canonical Male" or sometimes simply "Canonical" variant contains the primary chromosomes for a genome. For example a human "Canonical" variant contains chr1-chr22, chrX, chrY, and chrM. The "Canonical Female" variant contains the primary chromosomes excluding chrY.
+
+------
+
+**Outputs**
+
+The output is in SAM format, and has the following columns::
+
+    Column  Description
+  --------  --------------------------------------------------------
+  1  QNAME  Query (pair) NAME
+  2  FLAG   bitwise FLAG
+  3  RNAME  Reference sequence NAME
+  4  POS    1-based leftmost POSition/coordinate of clipped sequence
+  5  MAPQ   MAPping Quality (Phred-scaled)
+  6  CIGAR  extended CIGAR string
+  7  MRNM   Mate Reference sequence NaMe ('=' if same as RNAME)
+  8  MPOS   1-based Mate POSition
+  9  ISIZE  Inferred insert SIZE
+  10 SEQ    query SEQuence on the same strand as the reference
+  11 QUAL   query QUALity (ASCII-33 gives the Phred base quality)
+  12 OPT    variable OPTional fields in the format TAG:VTYPE:VALU
+  
+The flags are as follows::
+
+    Flag  Description
+  ------  -------------------------------------
+  0x0001  the read is paired in sequencing
+  0x0002  the read is mapped in a proper pair
+  0x0004  the query sequence itself is unmapped
+  0x0008  the mate is unmapped
+  0x0010  strand of the query (1 for reverse)
+  0x0020  strand of the mate
+  0x0040  the read is the first read in a pair
+  0x0080  the read is the second read in a pair
+  0x0100  the alignment is not primary
+
+It looks like this (scroll sideways to see the entire example)::
+
+  QNAME	FLAG	RNAME	POS	MAPQ	CIAGR	MRNM	MPOS	ISIZE	SEQ	QUAL	OPT
+  HWI-EAS91_1_30788AAXX:1:1:1761:343	4	*	0	0	*	*	0	0	AAAAAAANNAAAAAAAAAAAAAAAAAAAAAAAAAAACNNANNGAGTNGNNNNNNNGCTTCCCACAGNNCTGG	hhhhhhh;;hhhhhhhhhhh^hOhhhhghhhfhhhgh;;h;;hhhh;h;;;;;;;hhhhhhghhhh;;Phhh
+  HWI-EAS91_1_30788AAXX:1:1:1578:331	4	*	0	0	*	*	0	0	GTATAGANNAATAAGAAAAAAAAAAATGAAGACTTTCNNANNTCTGNANNNNNNNTCTTTTTTCAGNNGTAG	hhhhhhh;;hhhhhhhhhhhhhhhhhhhhhhhhhhhh;;h;;hhhh;h;;;;;;;hhhhhhhhhhh;;hhVh
+
+-------
+
+**BWA settings**
+
+All of the options have a default value. You can change any of them. All of the options in BWA have been implemented here.
+
+------
+
+**BWA parameter list**
+
+This is an exhaustive list of BWA options:
+
+For **aln**::
+
+  -n NUM  Maximum edit distance if the value is INT, or the fraction of missing
+          alignments given 2% uniform base error rate if FLOAT. In the latter
+          case, the maximum edit distance is automatically chosen for different 
+          read lengths. [0.04]
+  -o INT  Maximum number of gap opens [1]
+  -e INT  Maximum number of gap extensions, -1 for k-difference mode
+          (disallowing long gaps) [-1]
+  -d INT  Disallow a long deletion within INT bp towards the 3'-end [16]
+  -i INT  Disallow an indel within INT bp towards the ends [5]
+  -l INT  Take the first INT subsequence as seed. If INT is larger than the
+          query sequence, seeding will be disabled. For long reads, this option 
+          is typically ranged from 25 to 35 for '-k 2'. [inf]
+  -k INT  Maximum edit distance in the seed [2]
+  -t INT  Number of threads (multi-threading mode) [1]
+  -M INT  Mismatch penalty. BWA will not search for suboptimal hits with a score
+          lower than (bestScore-misMsc). [3]
+  -O INT  Gap open penalty [11]
+  -E INT  Gap extension penalty [4]
+  -c      Reverse query but not complement it, which is required for alignment
+          in the color space.
+  -R      Proceed with suboptimal alignments even if the top hit is a repeat. By
+          default, BWA only searches for suboptimal alignments if the top hit is
+          unique. Using this option has no effect on accuracy for single-end
+          reads. It is mainly designed for improving the alignment accuracy of
+          paired-end reads. However, the pairing procedure will be slowed down,
+          especially for very short reads (~32bp).
+  -N      Disable iterative search. All hits with no more than maxDiff
+          differences will be found. This mode is much slower than the default.
+
+For **samse**::
+
+  -n INT  Maximum number of alignments to output in the XA tag for reads paired
+          properly. If a read has more than INT hits, the XA tag will not be
+          written. [3]
+  -r STR  Specify the read group in a format like '@RG\tID:foo\tSM:bar' [null]
+
+For **sampe**::
+
+  -a INT  Maximum insert size for a read pair to be considered as being mapped
+          properly. Since version 0.4.5, this option is only used when there
+          are not enough good alignment to infer the distribution of insert
+          sizes. [500]
+  -n INT  Maximum number of alignments to output in the XA tag for reads paired
+          properly. If a read has more than INT hits, the XA tag will not be
+          written. [3]
+  -N INT  Maximum number of alignments to output in the XA tag for disconcordant
+          read pairs (excluding singletons). If a read has more than INT hits,
+          the XA tag will not be written. [10]
+  -o INT  Maximum occurrences of a read for pairing. A read with more
+          occurrences will be treated as a single-end read. Reducing this
+          parameter helps faster pairing. [100000]
+  -r STR  Specify the read group in a format like '@RG\tID:foo\tSM:bar' [null]
+
+For specifying the read group in **samse** or **sampe**, use the following::
+
+  @RG   Read group. Unordered multiple @RG lines are allowed. 
+  ID    Read group identifier. Each @RG line must have a unique ID. The value of
+        ID is used in the RG tags of alignment records. Must be unique among all
+        read groups in header section. Read group IDs may be modified when
+        merging SAM files in order to handle collisions. 
+  CN    Name of sequencing center producing the read. 
+  DS    Description. 
+  DT    Date the run was produced (ISO8601 date or date/time). 
+  FO    Flow order. The array of nucleotide bases that correspond to the
+        nucleotides used for each flow of each read. Multi-base flows are encoded
+        in IUPAC format, and non-nucleotide flows by various other characters.
+        Format : /\*|[ACMGRSVTWYHKDBN]+/ 
+  KS    The array of nucleotide bases that correspond to the key sequence of each read. 
+  LB    Library. 
+  PG    Programs used for processing the read group. 
+  PI    Predicted median insert size. 
+  PL    Platform/technology used to produce the reads. Valid values : CAPILLARY,
+        LS454, ILLUMINA, SOLID, HELICOS, IONTORRENT and PACBIO. 
+  PU    Platform unit (e.g. flowcell-barcode.lane for Illumina or slide for
+        SOLiD). Unique identifier. 
+  SM    Sample. Use pool name where a pool is being sequenced. 
+
+  </help>
+</tool>
+
+
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/bwa_wrapper_in1.fastqsanger	Fri Sep 28 13:53:48 2012 -0400
@@ -0,0 +1,120 @@
+@seq1
+GGACTCAGATAGTAATCCACGCTCCTTTAAAATATC
++
+II#IIIIIII$5+.(9IIIIIII$%*$G$A31I&&B
+@seq2
+ATTCGACCTATCCTTGCGCAGCTCGAGAAGCTCTTA
++
+IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+@seq3
+GTAACAAAGTTTGGATTGCTACTGACCGCTCTCGTG
++
+IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+@seq4
+AGCCGCTCGTCTTTTATGTAGGTGGTCAACCATTTT
++
+IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+@seq5
+CAGTTATATGGCTTTTGGTTTCTATGTGGCTTAATA
++
+IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+@seq6
+AGGCGCTCGTCTTGGTATGTAGGTGGTCAACAATTT
++
+IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+@seq7
+TGTAGGTGGTCAACCAATTTTAATTGCAGGGGCTTC
++
+IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+@seq8
+ACACCCGTCCTTTACGTCATGCGCTCTATTCTCTGG
++
+IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+@seq9
+GCCGCTATTCAGGTTGTTTTCTGTTGGTGCTGATAT
++
+IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+@seq10
+ATTCTTTCTTTTCGTATCAGGGCGTTGAGTTCGATA
++
+IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+@seq11
+GCATTTCTACTCCTTCTCATCCCCAATGCTTGGCTT
++
+II#IIIIIII$5+.(9IIIIIII$%*$G$A31I&&B
+@seq12
+CGCGCTTCGATAAAAATGGGATTGGCGTTTCCAACC
++
+IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+@seq13
+ATTTCTACTCTTTCTCATCCCCAATCCTTGCCTTCC
++
+IIIIIIIIIIIIIIIIIIIIIAAIIIIIIIIIIIII
+@seq14
+CCCTTTTGAATGTCACGCTGATATTTTGACTTTGAG
++
+IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+@seq15
+CCAACTTACCAAGGTGGGTTACGAAACGCGACGCCG
++
+IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+@seq16
+TCAGGGTATTAAAAGAGATTATTTTTCTCCAGCCAC
++
+IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+@seq17
+GTGATGTGCTTGCTACCGAAACAATACTTTAGGCAT
++
+IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+@seq18
+TCAATCCCCCATGCTTGGCCGTTCCATAAGCAGATG
++
+IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+@seq19
+TTCCTGCGCTTAATGCTTGAGCGTCCTGGTGCTGAT
++
+IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+@seq20
+CTTATTACCATTTCAACTACTCCGGTTATCGCTGGC
++
+IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+@seq21
+CTGATACCAATAAAACCCTAAGCATTTGGTTCAGGG
++
+II#IIIIIII$5+.(9IIIIIII$%*$G$A31I&&B
+@seq22
+AATCAAACTTACCAAGGGGTTACGACGCGACGCCGT
++
+IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+@seq23
+TGTGCTTCCCCAACTTGATTTAATAACCCTATAGAC
++
+IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+@seq24
+TTTCTCAATCCCCAATGCCTTGGCTTCCCTAAGCAG
++
+IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+@seq25
+TTGCTACTGACCGCTCTTCGTGCTCGTTGCTGCGTT
++
+IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+@seq26
+CCGCGTGAAATTTCTATGAAGGATGTTTTCCGTTCT
++
+IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+@seq27
+CGCTAATCAAGTTGTTTCTGTTTGGTGCTGATATTG
++
+IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+@seq28
+AAAGAGATTATTTGTCGGTCCAGCCACTAAAGTGAG
++
+IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+@seq29
+CAAATTAATGCGCGCTTCGATAATGATTGGGGTATC
++
+IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+@seq30
+ATCCCCTATGCTTGGCTTACCATAAGCAGATGGATA
++
+IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/bwa_wrapper_in2.fastqsanger	Fri Sep 28 13:53:48 2012 -0400
@@ -0,0 +1,120 @@
+@seq1/1
+GGACTCAGATAGTAATCC
++
+II#IIIIIII$5+.(9II
+@seq2/1
+ATTCGACCTATCCTTGCG
++
+IIIIIIIIIIIIIIIIII
+@seq3/1
+GTAACAAAGTTTGGATTG
++
+IIIIIIIIIIIIIIIIII
+@seq4/1
+AGCCGCTCGTCTTTTATG
++
+IIIIIIIIIIIIIIIIII
+@seq5/1
+CAGTTATATGGCTTTTGG
++
+IIIIIIIIIIIIIIIIII
+@seq6/1
+AGGCGCTCGTCTTGGTAT
++
+IIIIIIIIIIIIIIIIII
+@seq7/1
+TGTAGGTGGTCAACCAAT
++
+IIIIIIIIIIIIIIIIII
+@seq8/1
+ACACCCGTCCTTTACGTC
++
+IIIIIIIIIIIIIIIIII
+@seq9/1
+GCCGCTATTCAGGTTGTT
++
+IIIIIIIIIIIIIIIIII
+@seq10/1
+ATTCTTTCTTTTCGTATC
++
+IIIIIIIIIIIIIIIIII
+@seq11/1
+GCATTTCTACTCCTTCTC
++
+II#IIIIIII$5+.(9II
+@seq12/1
+CGCGCTTCGATAAAAATG
++
+IIIIIIIIIIIIIIIIII
+@seq13/1
+ATTTCTACTCTTTCTCAT
++
+IIIIIIIIIIIIIIIIII
+@seq14/1
+CCCTTTTGAATGTCACGC
++
+IIIIIIIIIIIIIIIIII
+@seq15/1
+CCAACTTACCAAGGTGGG
++
+IIIIIIIIIIIIIIIIII
+@seq16/1
+TCAGGGTATTAAAAGAGA
++
+IIIIIIIIIIIIIIIIII
+@seq17/1
+GTGATGTGCTTGCTACCG
++
+IIIIIIIIIIIIIIIIII
+@seq18/1
+TCAATCCCCCATGCTTGG
++
+IIIIIIIIIIIIIIIIII
+@seq19/1
+TTCCTGCGCTTAATGCTT
++
+IIIIIIIIIIIIIIIIII
+@seq20/1
+CTTATTACCATTTCAACT
++
+IIIIIIIIIIIIIIIIII
+@seq21/1
+CTGATACCAATAAAACCC
++
+II#IIIIIII$5+.(9II
+@seq22/1
+AATCAAACTTACCAAGGG
++
+IIIIIIIIIIIIIIIIII
+@seq23/1
+TGTGCTTCCCCAACTTGA
++
+IIIIIIIIIIIIIIIIII
+@seq24/1
+TTTCTCAATCCCCAATGC
++
+IIIIIIIIIIIIIIIIII
+@seq25/1
+TTGCTACTGACCGCTCTT
++
+IIIIIIIIIIIIIIIIII
+@seq26/1
+CCGCGTGAAATTTCTATG
++
+IIIIIIIIIIIIIIIIII
+@seq27/1
+CGCTAATCAAGTTGTTTC
++
+IIIIIIIIIIIIIIIIII
+@seq28/1
+AAAGAGATTATTTGTCGG
++
+IIIIIIIIIIIIIIIIII
+@seq29/1
+CAAATTAATGCGCGCTTC
++
+IIIIIIIIIIIIIIIIII
+@seq30/1
+ATCCCCTATGCTTGGCTT
++
+IIIIIIIIIIIIIIIIII
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/bwa_wrapper_in3.fastqsanger	Fri Sep 28 13:53:48 2012 -0400
@@ -0,0 +1,120 @@
+@seq1/2
+ACGCTCCTTTAAAATATC
++
+IIIII$%*$G$A31I&&B
+@seq2/2
+CAGCTCGAGAAGCTCTTA
++
+IIIIIIIIIIIIIIIIII
+@seq3/2
+CTACTGACCGCTCTCGTG
++
+IIIIIIIIIIIIIIIIII
+@seq4/2
+TAGGTGGTCAACCATTTT
++
+IIIIIIIIIIIIIIIIII
+@seq5/2
+TTTCTATGTGGCTTAATA
++
+IIIIIIIIIIIIIIIIII
+@seq6/2
+GTAGGTGGTCAACAATTT
++
+IIIIIIIIIIIIIIIIII
+@seq7/2
+TTTAATTGCAGGGGCTTC
++
+IIIIIIIIIIIIIIIIII
+@seq8/2
+ATGCGCTCTATTCTCTGG
++
+IIIIIIIIIIIIIIIIII
+@seq9/2
+TTCTGTTGGTGCTGATAT
++
+IIIIIIIIIIIIIIIIII
+@seq10/2
+AGGGCGTTGAGTTCGATA
++
+IIIIIIIIIIIIIIIIII
+@seq11/2
+ATCCCCAATGCTTGGCTT
++
+IIIII$%*$G$A31I&&B
+@seq12/2
+GGATTGGCGTTTCCAACC
++
+IIIIIIIIIIIIIIIIII
+@seq13/2
+CCCCAATCCTTGCCTTCC
++
+IIIAAIIIIIIIIIIIII
+@seq14/2
+TGATATTTTGACTTTGAG
++
+IIIIIIIIIIIIIIIIII
+@seq15/2
+TTACGAAACGCGACGCCG
++
+IIIIIIIIIIIIIIIIII
+@seq16/2
+TTATTTTTCTCCAGCCAC
++
+IIIIIIIIIIIIIIIIII
+@seq17/2
+AAACAATACTTTAGGCAT
++
+IIIIIIIIIIIIIIIIII
+@seq18/2
+CCGTTCCATAAGCAGATG
++
+IIIIIIIIIIIIIIIIII
+@seq19/2
+GAGCGTCCTGGTGCTGAT
++
+IIIIIIIIIIIIIIIIII
+@seq20/2
+ACTCCGGTTATCGCTGGC
++
+IIIIIIIIIIIIIIIIII
+@seq21/2
+TAAGCATTTGGTTCAGGG
++
+IIIII$%*$G$A31I&&B
+@seq22/2
+GTTACGACGCGACGCCGT
++
+IIIIIIIIIIIIIIIIII
+@seq23/2
+TTTAATAACCCTATAGAC
++
+IIIIIIIIIIIIIIIIII
+@seq24/2
+CTTGGCTTCCCTAAGCAG
++
+IIIIIIIIIIIIIIIIII
+@seq25/2
+CGTGCTCGTTGCTGCGTT
++
+IIIIIIIIIIIIIIIIII
+@seq26/2
+AAGGATGTTTTCCGTTCT
++
+IIIIIIIIIIIIIIIIII
+@seq27/2
+TGTTTGGTGCTGATATTG
++
+IIIIIIIIIIIIIIIIII
+@seq28/2
+TCCAGCCACTAAAGTGAG
++
+IIIIIIIIIIIIIIIIII
+@seq29/2
+GATAATGATTGGGGTATC
++
+IIIIIIIIIIIIIIIIII
+@seq30/2
+ACCATAAGCAGATGGATA
++
+IIIIIIIIIIIIIIIIII
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/bwa_wrapper_in4.fastqcssanger	Fri Sep 28 13:53:48 2012 -0400
@@ -0,0 +1,800 @@
+@427_12_390_F3
+AAGGGAGTGGTGCTGGTGGGAGGCAATTTGTCGGACCTGGGAAGCGAGTC
++
+BBB>=;@@A6<A;=>=A?>??@A58@B>9>>@?70?@<=>>@A9/5?=25
+@427_12_550_F3
+CGATCTCTGCAACTTCGTGCGCAGGCGATGGGGGGGAAAATGAACGGATA
++
+8A=?<BA@=;?A;?><B?;:5@.<:7?9;6<A62<@;8<==@3:>;=339
+@427_12_941_F3
+GGGCCAAAGTAAACGCTAATCGAGGAGGACAAAGTAAGGAAGGCGCCTGT
++
+B@72=>?A:;<:?>?94B??;3A<?1@<3=<A?8>A6?>=>7A/>=07<@
+@427_12_1018_F3
+CTCTTCTCCTCCGGACTAGAGGCCCGGGCAATCAAGGCTGCGTAGACGTA
++
+>?<;5@:>>5>7:?<7@><=:>?92<?5>=;@@>?2<?>:?<9<4>56?@
+@427_13_422_F3
+AATAACGAAGCGTGTGTGTTAGCGGGAGAGCCGGGCCCCTTCCCGTACGT
++
+9>A2,9@9<8<=;;7=7:>@1<:?37<1>1690>7=<:=A/>53.::<=/
+@427_13_494_F3
+CGACTACCCCTACCGGTCACCGCTACGGTGAGGCTAAGCTCTTCCAGACG
++
+.>>?@;A@?7?@<>39?>=7:==76;=;=65@:::9?8?3=@8=::@2<.
+@427_13_606_F3
+TTTAACGCGATAATCCTTCGAAGGAAAAGAAGTGACTTTCCGTACATACC
++
+BB?A?@A??>B@A@<=@A==A>>>>AA@7<?:B=9<@A@A@2@>8><;<=
+@427_13_861_F3
+CGAGGTGCAGGCCTGCTCTGGGGACCCACTGTGACCAGGCGGCCTGCCAC
++
+=>>@<@>BB>>58A=@A<BABA:=>@B:==?A9<AA@7::@;??:A?;2>
+@427_13_961_F3
+GACGGGAGACGCTGCGATCGCACCTTAATGGGGGACCGGATGCACAAAAG
++
+@BBBBB@BB@B>BBAB@B@AB@ABAABBA?B?B@>@@BA=A?A:<>BBB3
+@427_14_270_F3
+GCAGATGCGTGGAGCAACGGTGGTCTGTAGATCGTCAGGATCTGAAACCA
++
+A=A@?BB>@9@BAA89>A@:A@@>2@A;383B><;:;>=1=8B:<>=?8=
+@427_14_376_F3
+TCACACGCAGGGCCCCGTACGGAGAATACTGCTCAATGAAAATGGAGGGG
++
+B9??@BA@;?BB@@>AA?:?>A><=<A:4=5<?;=<?;?:95=61;<:<2
+@427_14_602_F3
+GGCCGGTTGGTCGACTAGGCAGGCCGACAATGCCTGAACATACTAGGGCC
++
+,B=7==A:9;AA45,=:9/.2<;58>9806:=>:<8=877?=9198>:2:
+@427_14_665_F3
+CATACGAGGGAGTCTCTAGCATAAAGCTGGGTCCCCTGACATTGACCTGA
++
+<A@@>B7<A5@>@>>>;<@68,9@;<-<<:>9?@?>6.A65=;=8569;5
+@427_14_1010_F3
+GCTGCTGTGGCCGGGCGCACCCAGACAGGTAGAAAGCCGACTCACCACGT
++
+@??A><@=ABA@?A?A@A??AB@AA@=<?B;<@?A<94?A=5;:@@2?@9
+@427_15_423_F3
+GCTGGAGGAGAAAGGGGGGACCCGCAATCGAGCGTCCGATAATGAAATGG
++
+>/B@=<A=??@B>A>B@@>9?@=A6@B@9?5@6A7A@>@A?=?A/@@A?=
+@427_15_646_F3
+CAGTTCGCTTGGTCAATCAATATAGAGAACCTGGGGAGTAGTGTCCGGAG
++
+?@=?>=A?@??B876:@65.B<914;;<06=?914:67997;5<:/7771
+@427_15_872_F3
+CGGGTAGACTTTAGTACCTAGACGAAGGGAGTGACATGACGTCGCGTACA
++
+<:??A@B@B==>@>A:6=?;5<::30<==63@;;1?=;A5,=7<,4;6@0
+@427_15_1039_F3
+AGAGTCAACTGAAGCTTCCGAGTCGTGAACGGGGGGAGGAGAGGGAAGGC
++
+BBB@@@B?A?ABB><A>?9=:=<:@:?>51:AA>?87>?979<>><>>=<
+@427_15_1070_F3
+CTACTCCCTGCATTAGATACTGGAGCTCGGCTAGAGGGATGGCGTTAAAG
++
+=>A<@><?BAA?A?>?4??=;>?@>??=:@<6?98==><<:;<8A:7=@5
+@427_15_1081_F3
+GCTCCTCCACGATTAATCGTTGGGGTGCAATGAGAAAACAGCCAATGGCC
++
+@=AAAB@?@>?B@?=BB@?@B=@>;B@3:?BA39?>@7==<<<A?A<1A?
+@427_16_264_F3
+CCCGATCCTAGGCAGAATCGAGAGAGACCACAACCCGCGAAAACCATTGC
++
+@<>?@@?AA?@??@>>?;:A>>A=?>=?>?:A>@@@:A8@@@:>/@>A4=
+@427_16_565_F3
+AGCTATGGAATACCAAGACATCCAAGGAACTACTGCCGAAGGTTCCGGAG
++
+BB1AABB9@@B>3>=@@,?AB<8A>@@9<=BA8<<>>4A??@:??<?6@<
+@427_16_1107_F3
+TGTGTAAGTGAGACACGAGAAGCAAGAACTGATGCCCTGCAGGGTTTAGG
++
+<+>B><:;A@B?:>>:A7B5;B@?B>8;:>8=B:B@=;@25A9A=>@1A:
+@427_17_46_F3
+CCAATGAATGAAACAGGGTACCCGCGAGCGCCTGCTGAGCTGACAGTCTC
++
+:.>A:@>@?7A@<=2?;6?;>;99=<:8;95>0:><14;@4:><:,;:8?
+@427_17_342_F3
+AGCTGGAGCTGCTGCCACGGACAAGGTCGGAGCTGAGGCTGGCTGGACTA
++
+BA?A?BB>>ABB@;;AA@@>AA>=ABB1??:B6>?>B72>@B49>?@3<<
+@427_17_446_F3
+TATGCCGTGAGACGGGGGGAAACAGACCCTACCCCGATGTATAAGGCCGG
++
+=B?>8>BA?=>B;?;>A;:<=?937;?=2;6:==;9=@3?9;51;9:149
+@427_17_917_F3
+AAGACTACGCGTTAGGCCAAGAGAAAGACTCAAGAGACGACCTCTAAGAT
++
+@@=???A6=-;A:3<@?866@94:20<11@3;19:=:/:9<<45B@:48B
+@427_17_1027_F3
+CAGTGCAATGGGAGTAAAGCAAATTCGGCAGCCCGTGGCCGAACCGCTTG
++
+A@@BAB=>B>BAA?5>=AA8:@B@;=@?@9:>BB::?@A54=B?<0<B@:
+@427_18_267_F3
+CTGGCACCGAACGGAGGAAGAAATTGCGTAGATTACAGTAATCAGAAGAC
++
+AB@A;>@A@>AAAB:8B<>>@B@A=@?=@;=A<A3>?;@@?<:>+A?;A.
+@427_18_481_F3
+GGCTCGCCCCAGTATCGACGTCGTATGAGAGATGACGAGGCCCGGGCGAG
++
+AB>?;B@A>=AAA@@@A?=6B=><=B=<8>=7A2=<==5;@5>7<=3=>;
+@427_18_706_F3
+CTCTATATGGAAGGTTACTACTCAGTAACCTTAGGGACCAAGAACCGGTT
++
+>AAA@B?BAABAAAAA@@@A?B?>=B?@>>B@6??@><@@?:?A;<?=??
+@427_18_834_F3
+GGGACCCGACCTAGGACGGACAAAGACAGGGACGACAGATATACGATTCA
++
+@@@@><?A><@A?@7@A@@6=><?;<;;7@>=?=:<:<;>=6=/:A?B?4
+@427_18_846_F3
+GGACGCGTCACCAGAAAAACTAGGGGACGGTCCACGACCATGACGGGGAG
++
+BABB>BBBB7BBA@@ABBB1<BABA<B<A89BB?21A@@22@@A?>A@=?
+@427_19_11_F3
+CAGCCCACATGCACCCACTGGGAAGGCCACCCATGAGAAACTCCACGATC
++
+=1:<4>?><;=?><1?:>?7>=>=:<=<99:><<55;>>,@=>93>/15:
+@427_19_137_F3
+AAGCTGACGCTACCACGGACAACAGCGGTCAAGGCCGTCAGGCGAAGCGG
++
+?78;?@?<>;=AA=;7?9<8;=<:<8><968;<9;:<:;::<53;=7+85
+@427_19_296_F3
+CCAGAAACCTCAGCAACACACCACCTAGGCCCCCAGGGTCGGAAGATGCA
++
+B@BABBB@BBBBAA@<AAAB>@A@?AA@?@>A=?9>?>?@@@?@=?A<@@
+@427_19_324_F3
+TGGACGATTTAATGGCAGGGAAGTGAGACAAGACTGGGGTCTGCGAAAAA
++
+A;=?3A>>:>>:<87:8483>>627=;40596=885:66>3810/843:9
+@427_19_533_F3
+GAAAGCTCGATCGTTCGACTTTTCTTCGTCTGAGTCAATCAGACTTGGCA
++
+BA@@?>@A?>A@@@@?@<=BAB?>BA?<>3B?<;@?AB?7><@@@AA6?-
+@427_19_899_F3
+CATACCGTAGCCCAGGCAAGGAGACGCTCAGTGTAACAAGACGCAGTCGA
++
+@??B>=@<A?;@5AA8=6@B<:3A>6=57@9A2?A=;:A?4>,9A7=48@
+@427_19_1049_F3
+TCCGCTTGGAACATACTAAAGGAGAGTATATAGATGACCAGGAAAAGCTT
++
+?<>@:A?@B>B=>@@?>AA?B>@@@BB35@B>98<>A5/AB><<BB>8<:
+@427_20_363_F3
+GACGTCGAGATACGGTACCCGGGCTATATTTTAGACGACTTAAAACTAGA
++
+AAAA>@B>A+BB@A7B@?<==?>=@.@9?=>A=<<1><>>>=@@?74?.@
+@427_20_407_F3
+ATAACGGACACCTAAGAAGAGGGAGTTAACATCCAGCGTAGGGCGCGTAC
++
+BBBB?BBB?ABBBBABB@>BBB?@?AB?@@2B?@;@94B@AB??;/?@>=
+@427_20_608_F3
+ACAGCACGCGGCTGCAGGAGGGAGAGAGGGGCAAGACGGACGGGCCTGTG
++
+B@9<AB?35>@>9?=AB7:@@A6<@A=>=A@@=<=?@<;:=<-<@:=0=:
+@427_20_892_F3
+GACACTCCATGGGTTCGCCGTACGTCAATGCCGACTGAAGAAGCCAGAGG
++
+A@A@?A@@>@BA?AA@>@>?B@AABB?AB:@A>?AB<BB@A@>@>>9>?=
+@427_20_982_F3
+TCCCGCGCAAACATCCTGATCAAAACCATCTCCCTGACGGTGGGCTTGAT
++
+@??>>>?98@@<36:;=:9=?:89<>9;.:7??/734:40;09.8<1834
+@427_21_328_F3
+TGTGCGTCTAACCCCCCCCAGGGCGACGAGCTGGGAAGGCGTGAACAAGC
++
+B@>>@BB;A?BB?A>AA>;8BB>:<@@<7<AB==>?><>9@A:=7A@/<=
+@427_21_334_F3
+AACAGTAAACAGTAAGGGGGAGAAGGGGCTCTGGACGATGAAGAGGGGGG
++
+AB>4>?B@84>@>@;@BA<=<A<3@?A;1=6?=8>@=?7;A=<<?<;<69
+@427_21_366_F3
+CTACCCCCAGCTTTCCCCGTTGCCTGCGGCCCAGCGGTGGGGCCCATGAG
++
+>AA?@@@@>?>B=B><B@?A@AA;B?A=7:<B<>A9>B=@<BA?B>@;?7
+@427_21_473_F3
+GATGCATGGACGAACCACGCTGGGCAGGACGAATTCTACCGGGCTCGAGA
++
+BA?<>>B:>8=B@@8=<==;@A>@;<@;=<69/=<7>5<>4?9;91;36>
+@427_21_537_F3
+AAGCAGTCATAGGGAGCTAGGCGTAGAGAGCGGCTGTGCAAGTCCAGACG
++
+AB@@@ABA:A?B@B>>AB=A@@;A?@A@?>8?A<A>=><@@4>=@@7:=9
+@427_21_563_F3
+CGACAATTCTCGATCGTAGCCAGTATAAGAGACACAAATGCGAGGACTTC
++
+>@AAAAA@?=>BAA>=A@@??>=A==@@?@<A:@>:A@@=9>@<@+>=@A
+@427_22_56_F3
+GAGGCACCGTCACAAACTAACTACGTCGCTGGTTGCTCGCGATGAAGGGG
++
+?>=>.?A@?9AB>;?7@A<<=B:;<@7=:?6:B:;3?>0@38A3??<8<<
+@427_22_692_F3
+CGCGATACGAAAGGGGAATCGCCGAACCCGTAAACTAGATTAAGGGAAGA
++
+:?;<>B>:@>A>>AAA71@=<?3>2=>?7;9<<7;?7<>9?=+=?-?=7;
+@427_22_787_F3
+CGGTGGCAAGTACGCCGGTAGAGAGGGGGGGGGGGCCGGGGGGCTCATCT
++
+<@5>:@@<76@A;;;;A7=;<><;8>A;4;>A<965+;<;<>598;6<82
+@427_22_927_F3
+TCAAACAGAGTAACTTGATTGGTTCCTAAGTGGTACAAGAGGTCGAGGAA
++
+@ABB@>?A??BAB@AB=A?B@@BB@A=@A@B<?9=?>=7<?>><9<>>?;
+@427_23_177_F3
+CTGAACGGTGAACCAAGGCTGCGGCACATGCCAGGCCATTTTTGGTTATC
++
+>A@AA@@@A>BA>@=?A@>AA<>>=@@:?=>A<=>>>2BAAA4:,A?6A8
+@427_23_740_F3
+GCAATCATCAGGTTCGGACTGCCACGCAAACTCTGAGAGGATTTTCTAGA
++
+B@@AB@<?@AA@A?@?A@?>A;@>@B;?AA=2>?@A/A=A@A@@B<??7>
+@427_23_874_F3
+GGAGAACTCTAAGAAAGAACTTTAAACCAGTCTTGCCCCCCGATCGTGAA
++
+<@ABBBAB=AABAAA@@BA<>A@@B?A??=A@B@@@B<BBB<=<@:>?>:
+@427_23_986_F3
+CGGTCTGTTTTGCGGGACACGAGGTCGTGAACTAGACTGCGGGTGCATCG
++
+@6=??@<<><>@A@:<=<;==>@;3=>8=;>::?8@?9=99=4:6@<67;
+@427_23_993_F3
+AGACTCCGGGACAATGAGTCCAGCAGAGGGTGATGAAGGAACGAACGGAA
++
+@>BAAA?BBB@?B@BA@ABAB?B?A@A?AAB@<AA?>@=AA<ABB@:@AA
+@427_24_476_F3
+CAGCAGGTCCAAACGTGGATCCGCGGGCGGAGAAGGCGACACAGGGCAAA
++
+=B>:>>A<<76===6=?;3=;<<45<=6,876968:-256;693464<<<
+@427_24_880_F3
+CGTAGGTAGGCCAGGCGAGGTATTCTATCTGGGCGCAATTACCAGGAACA
++
+AAA+AB@?;@AA?;?ABA>AB>B:=BAA+@=A>4?>A?=@4?;2>9A=1?
+@427_24_952_F3
+GGTTTTTCCTTGTTCATGTGTAATCCAGTATGGAGGGCCAAAGAGAGTCC
++
+@?B>@9?@-16=9<54:-<53=6>:2;.41/<176,>8137;5:.9=905
+@427_24_1040_F3
+CCATTTTCCCAGTGAGCACCCTTGCTTCCAATCAGGGGACTGGCTCAGAA
++
+45/2<9A@A93A7<5:;@6=<A:7=:B5740@<698=3<:8:8-:5,220
+@427_25_60_F3
+TGAGGTATGGGAGTCGTAGGCGCACTCGAGGCGCCTGAGGAAACACCCTC
++
+A/>>=?==>:>>8?:>=.=>9>84:@:96<7>6<=<93<<5;>:8==.1<
+@427_25_234_F3
+TATCAAGCAACGGGTGTATGGGGGAAGAGAAAGGCGATCCCACCAGATCA
++
+0>@</1A7<+8A64::>4<9<@88=9>94<8@:7<9=>;?8:;195:<5>
+@427_25_854_F3
+AGCACTCGCGTAGACAATCGACAGCCCTGACCGAGCGAATAAGGGCTGAA
++
+AA@BBB?AB=B@@@>=;B;@4?B9?=@B;@6A?9=<:A@A6:73@55>2>
+@427_26_256_F3
+GAGGGCCGGGGGGCGATCGAAGAGTCTCGAGACGAGGCCGTGTCTCGGAA
++
+BB=BAA@@BABB?7A2>-@@@>@?AAB=@8@?9><@>:7>@>:7@@45+8
+@427_26_331_F3
+TCGCTCGCGCTAAGATACAAGGAAGCTCAACTTTTAGCGCGCATAGGCTG
++
+=73:><A;=9?<>;/A;;:<=?276:<19;;A<7<<9<3:9:-.<<>.74
+@427_26_583_F3
+CACGCGTTATGGAGCTCGGCGAGGGGACTAGGAGCAGAGTCTGCTTAGAT
++
+AAA@ABBBB?@B@?=B;>AA?=?@A@>7A@AA>>@==@?A=B==BB7:AA
+@427_26_646_F3
+AGAAACTCTGAGCCGGACCAAAATTAGGAGATCAAGAACCCCGGGAGGCC
++
+@@AAA?A>??BB@@A?;A@=BB??:AA7=8AB:><=<==@B;:9:A:>?5
+@427_26_857_F3
+TTAGCCGTCCGCTGTATCAATCCAGTGTAGTCGTCGTAAACGTAACGTAC
++
+>A?=>@@<><=<=><@?7<9@><?:@;@8:@@;6<8>>A9=1/A??5:@.
+@427_27_160_F3
+TTAAACGTATTCTAGTACCTAAAGGAAGCTGGGCTCACAACGTTTAAAAG
++
+>>AA@@-@A?A<>A;@647A=<>9=?;:7@8;3>@2:5@<:7@?A99:?4
+@427_27_231_F3
+GGCGGGCAAGGGCTGGGGATGGAGACGACTACTTTCCAAAGTCGGCATGC
++
+ABAA?AB=>>@B>@?@@6;B@A5;@@@=8=>;:<A?@.?;<@;8=>9<5<
+@427_27_369_F3
+CAATGCCCCTGAAATGGACGTACGCCTAACCGGAGCCGGCTGGGCTACGC
++
+;3:7?@=34?A<3/@A?14<A8;4>7=31<98.0:<<54<77659?4.8<
+@427_27_778_F3
+GCAAATGCCGAAGAAACAGAGAGAGGGCACGGCAGGACACCACCTAGACG
++
+AA:=6AB=;=>?;=:@>6=;>>:8=@@=;7A@><?A@?=<???;@?===7
+@427_27_939_F3
+AAGGAGGGACACAAAACCCCGGCTAATCAGAGAGCAAGGGGAGTCGTCGA
++
+2:53=@:<@9:<?@??28>@<5:A<@>;02=6867A=<<@58->;:72/2
+@427_27_1002_F3
+GATGCCGATAATTACACACCCCCAAGTGCGAAGGCAAAGGATGGCTTCCC
++
+>?<>B<A<=?<B;;9@A9>?@A:A=<A5<3=B:;:AA==0A>3<37A>=5
+@427_28_593_F3
+TGGCAGAATATTACCATCTAGAGAGAAAAGAGGGTTAGACGCAGGCTAGA
++
+4B;?>@@==;A@=;;A?-;?@@:=?BB95><@<4AA<;>:?97<>@?<89
+@427_28_739_F3
+CAGCTCCCCGCGAAGCTCTCATTACCTCGGGGTGACTACTAAACGTTGAG
++
+6B=@AA<;=3:B?@65@8@>5A:=>@A859<>99>4A</?:;?596A348
+@427_28_798_F3
+TACGTAAACCACCTCGCCCGCACTCCAAAACCGAGACCTTCCCACATCAG
++
+B@@@@???<36?8:::<=?6-;89<;;:4994<.;5>A5:43>+>0+<11
+@427_28_923_F3
+CAGCCTTGATCCTACGCTGCGCTGCCGCGAGCGTGGACGATGCTCGAGCC
++
+?B=A?B@>A8BB@>>@>B;6>>AA;A8=:2@:::8?8>66A4?<:?4?;;
+@427_28_1127_F3
+GTCCGGGACCTCTTACCCAACACAAAGGCCGAGACCCGTTGCAACTGGCG
++
+??BBBB?@BAB@BABA@?BBA>@BBAA=?>BB>?@A=:?@9@BA@78?B-
+@427_29_95_F3
+AGACGAAGTGGTGATGGGTGTAAACGGCCCGGCGTAGAGCACGCTCGAGC
++
+?8?@>A><<:9??5????;;>@@9=<7?8<==>4@-==7;/5>1;4;;24
+@427_29_521_F3
+CTCTGACGTCCCATGAACTTCGCGAAGTCACCCCGGCACAAAACGATTGC
++
+>B<@=AA===BB>?<>B:>>@;<6>=?>/;>B?<=3@0;?>><88=;<03
+@427_29_911_F3
+GTCCGCCAGTCCAGACTGGACAATTCGGACAACGGGCTGAGGCTAGGGAC
++
+B?BA@BA@B@?AAB=?@ABB=@BBB@B>A<>@@BA<=?BA>?=@B<B<@=
+@427_29_970_F3
+GAGCTCGACGCGGGCGAACAAGTGAATGCCTCGAACAGACAGAGCGGCGA
++
+A@78BAB:>=BB9;>BA89BAA88AAB-:=@@4<<A@2:>>>.,9>B-78
+@427_29_978_F3
+ACCCCAAATTTCCGCGCTTACAAACATCTGCGACAAAGATATGGTCCCGG
++
+A?@BAB@?B?AA?B?@B@BA>ABB?A?9A@??=7@AB/A?<A?<@@@=@?
+@427_30_261_F3
+AAGAGCGGCGGCCAAGAGGCTGCTATTGAAGCCTTGCCCGTTCACCACCC
++
+A?>??A@@>?@@=@<@<??=A?>@>BA<>>>@7>?<??>>=<=<=>:;?@
+@427_30_606_F3
+AGTAGGAACCTTACACACGGGAGGCAATCCCTGGCGTGAGGCTCGAGGGA
++
+>?@8=@@:<<@A86;A=88>@?8/-<??699A929>>667<9=59>881:
+@427_30_752_F3
+CGGCGGAGGCAGACGCACCATACTGCAACGGAGGAGGGCAAGATGGCGAT
++
+@B@=?B?@>=>A.<>>;8;9@@<>;AA:;;??8:3@>:;8<=6=6:0624
+@427_30_764_F3
+TTGAGACCGAGGGCAGCGCTAGAAAAGCGTGTATTCACGGGGCGAAAGGT
++
+BB?A@@=0>3?A:=8?;98??>7=<?@/<9:A3=:=;9=8<<8:?@<9;>
+@427_30_773_F3
+CGTTGCGCAAGAGAAACCGCAGCTACGGCACCGCCGTATACCTAATCCAA
++
+<@BBB=BBB@=?@B?=A@@==@@@@=B??===@>>;>A=7A@@8<8<>>?
+@427_30_959_F3
+AGGGAGACATAGCCTGCACTCCCAACCAATTTGCCACGAAATGGTCATAT
++
+>=@@?@=?;BA@>9BA=:=BAB=;:AA;9BB?88<==;??=?79;6677@
+@427_30_983_F3
+CGTCTGACTAGGACTGAGAACCTCACCCTGGGCTCTCTAGAGAGGCTCCG
++
+>?@B?BA@A=BAB>@BAAB?B@AA=BB?@?B@A@9A:A<7B<B@>B<@@A
+@427_30_1018_F3
+CAGAAAGGCCCCTAAGGCACACACCCGCATGAGGCCAGGCTACCCCAAGC
++
+@@@AABB@B?A@;4AAA<;A?A>4AAA98BAA:9A@B=3B;A;:A>A=,B
+@427_30_1044_F3
+CCCTTCGGAGGCGGACCAAGACAGCTAGGGAGGGAGAAAAAAGAAGAAAC
++
+?BA@ABB=;AA><==AB>=@>A@=>=A?=A=A>9A7BABB@A3@A.<76+
+@427_30_1053_F3
+CGCCGTGCGCTTCTATCGTGGGACGCAAGTTCCGGATGATGACAATACGT
++
+<?A=@@ABB>BB@?@;;8A@>@??@>=A<A=9?@?9=9@<.:<BB:9<==
+@427_31_153_F3
+GACAAGGAACTGCCAGGCCGGAGCGGAAGACGTACCATCATCAGCGCGGG
++
+?>=>9AA?@;@A?;9@@:;;>>6<;?@9<<<A@8<><=8@A=>1?9>:9=
+@427_31_598_F3
+GGCAGGGTCTGGCTAGCATCGGTTAAGGATCTGGGGGAAGAGAATCTACG
++
+BBA?AB@?/-ABA=9A:1?9BA@@<8@>0<>?=<>@@=?::AA>@::99=
+@427_71_906_F3
+TACCGGGGGTACAATGCTCGGCCGACGGAACTAGTTCATACTGAGCAAGG
++
+>??AA=?A?@A>?77@==<:<A><;===?>1?9::@9A:9-A5>750?:8
+@427_292_217_F3
+CCCCAGAGTTAAGGGACCCTGAGGGGACGTCCAGCCACCAAGAGCGCGAA
++
+@@@=@BA?AA@A@??6=A<B>@?@>>A<=A=?;?>=?@@A;=><>5@>>=
+@427_794_484_F3
+GCTCATACGGACGAGACACCCGTTCCACGATTGAGGCCACCGGGGGGAAT
++
+A@BAABBBA=ABBA=@@B?4<BAA4>A@81@B@26>A@+<>=?<;?BB:2
+@427_1253_1057_F3
+AAACTCTAAGGGGCGTCATACGCCGTCGTCGGTCTAAAAAGCTCCCCGGC
++
+BB??@A@>?:AB>A>B@>@<A@=><B@;>8=A@9?>@:=:?=8<8?<85<
+@427_1299_965_F3
+GCGGACGAGACACCCGTTCCACGATTGAGGCCACCGGGGGGGGTCTGAAG
++
+@;>?@BA@@>@B?79>??=?AA88?@A5<?;?9=?=?89?@?97>A?:8>
+@427_1444_687_F3
+TACCTCTTACCCAACACAAAAACCGAGACTTGTTGCAACTGCGGGATCGT
++
+?;@?B@ABA:?:B@;A;@A@A?@>@A8?<A?=@;<>A?>?<@@><@A?4A
+@427_1522_8_F3
+TCGTGCAATCCGCGAACCACACCGCCCTAAAGCCCAGAGTTAAGGGACCC
++
+8@@A@?<>B?A@A?;,@@=<6@>A@@A:A>9@>=<<@;AB<@=A@@<=B@
+@427_1891_897_F3
+CGTAGAGGCGAAGTGGTGGACGTGGAATTCACTAACGCAACGTACTGAAC
++
+?@?@>AB??9BB>?A@B?07>B>;>>BA89AAA-;=>?=@?=@>@@@>=A
+@427_1927_689_F3
+TGCAATCCGCGAACCACACCGCCCTAAAGCCCAGAGTTAAGGGACCCTGA
++
+@A897BB7:8?A7:/71,85<:793:<5:0386;1:><<;::7<6;4:83
+@428_247_467_F3
+CTACCCCGCGCGAGACCCATCACACGACGTGCAATCCGCGAACCACACCG
++
+ABAABAAAB@AAAA?>>?AA:?@A:9=>A@4;?B@<>8B>.8?A>1:<@>
+@428_385_1306_F3
+AAAGGACCTAATAACCAATAGCAAGGACCTGGTAGGCAGTTTATGTAAGA
++
+@B;@??A8AA3B@A@0><A>6<A?8,9><A::;>><9?;A>?9@8:<>5<
+@428_435_1382_F3
+TTAAGGTGCAGGTGGTGAAGCGGAGATGTTACCCCGCGCGAGACCCATCA
++
+<?<BA<B@=@AAB@=AB@AAAA>>=?A;?5B?A==@B=@8@>@3A@??2/
+@428_589_1697_F3
+CGAGTCTAGAAGAACGAAACGCGCCCCAGGCCGAAGTCTAAGGGGGGCCA
++
+@1>B6<<;A?@?B></=B@@/>>B???5?:=<=?9:=12><:>>;:<577
+@428_615_1095_F3
+CGATAAATGGCACATTTGAGACGTCGACCTACGTCTCAAAATGAGGCATT
++
+<9<A>BBA@9@B@AAAA9@9=A=B19?:<=;A:A.6>7>?:A/?;:<4@@
+@428_628_321_F3
+GGCGAGCACTGATTGCGTGATAGAGGGTAAACAATGCGGGCCATCAAACA
++
+>=9<;?>>:?@>>A9<?>93A:7;5=9>:4?:.8;9:79.948>1?<775
+@428_666_413_F3
+GGTGACAAAGGAGGTGAACAAAATTCACAAATGACGGTACTCAATAGCGG
++
+ABBB=BBA@?B?AAAA@@A<:>@A?=?=@::?@?<=6@A8:<@@=?=<>7
+@428_912_273_F3
+TCCACCGCGAAACGGGCCCCGTCCAGAAAGAGAGCCCCGACTCCCCAGGG
++
+BAABBBB@@BABA@BB@>??BB@A?@A=@<>@??<ABBA::@A@@@@9><
+@428_1011_1047_F3
+TCGCGCCGCCCTAAAGCCCAGAGTTAAGGGACCCTGAGGGGACGTCCAGC
++
+BB?>?BA@<>?B>=?A?>8@AB@A?A@>;=>>??@>A?==@?=6@>7;5>
+@428_1380_646_F3
+GGTTATCCCACGGGTACTACGATTTTGGCAGCGAAACACCAGAGGAATTC
++
+>?@?=B?:==AB==>>??>6??@?>?@8=8=A;?7?@;>4>?0=7>??A8
+@428_1424_131_F3
+CTCTATTAGCCCATTGTCAAGGCGACAGACACACAACAATCCGACACCAT
++
+6B7?@BB>:>AB:@BBA>>8B8;:7><<>=9<6<+>8><<?@9>05<46=
+@428_1495_1538_F3
+CAGTGCAATCACTTAAGGTGCAGGTGGTGAAGCGGAGATGTTACCCCGCG
++
+A@BAABBAB=B?BBA@?ABA<=B@A>>@<A>=B@>:;B@@=6B;9?:B<8
+@428_1562_623_F3
+CATGTATTTGACGGATGGTCCAAGGACGATAACCAATAATCCAGGAAAAA
++
+;@A@BABA?AA@A<B?@?==@BA=:?@?><?>?5:==A?4:>?32:=@?<
+@428_1569_464_F3
+GCATCACACGACGTGCAATCCGCGAACCACACCGCCCTAAAGCCCAGAGT
++
+=8@@:@A?9:>??A;=><?<<>A=8+?>>28=?=98><@96=@>9=<>:=
+@428_1573_204_F3
+ACAAGTCATGTGACGCAATCACTTAAGGTGCAGGTGGTGAAGCGGAGATG
++
+B=;=ABA9:AB@;=AA44>5?;==65=2;978?:;19?/@-1=<==3?:=
+@428_1632_1017_F3
+AAACGTAACTCTAAGGGGCGTCATACGCCGTCGTCGGTCTAAAAAGCTCC
++
+BBBB9BBBA@:=8<?@?@@1B7@A/===?6A===,>;B9A86?65=.=?:
+@428_1643_455_F3
+TAGTCTAGGATTTCCCACACCACCGGCCAACCGGGGGTACAATGCTCGGC
++
+A>>A>AA?;BBBAA>B@@?=AA@@<9>>@@??>A?<=<B@=75<A>;:<@
+@428_1684_1168_F3
+CGGGAATCTCAATGCAAACACCCATCGGGTTCACTGGGCCCCACGCATGG
++
+@BAABBBAABBBBABBBAA>>@A6BABA>BAA@=B@AA@@=A?;<A?==@
+@428_1691_159_F3
+TCCCGTTAGCCCATTGTCAAGGCGACAGACACACAACAATCCGACACCAT
++
+@2<?ABA@A=A=@@@@>?@>><<?=?><A92;=<8=8=AA<=9?1;;+@>
+@428_1816_859_F3
+TGCCCTAAAGCCCAGAGTTAAGGGACCCTGAGGGGACGTCCAGCCACCAA
++
+BB>?=A?<;?A?9=@=>=<:=A=?=A@;@:>A==<:;=A;;;;<:=;=@3
+@428_1829_1041_F3
+AATAGTGTCACATCGCGAAGGAGCCCGGATACAGAAAAACGTCGAATAAG
++
+,??A@9AB>@5AA>A9A?=?:B=?:5A=;>8@;:89A>=92A96<4@>;9
+@428_1841_222_F3
+GCGCCCCATACTAGAGGCGAAGTGGTGGACGTGGAATTCACTAACGCAAC
++
+@;;>@@B<=A?B=<@??7<?@A>?9A<,>7>A199?B9==:B679;;6=:
+@428_1971_118_F3
+CATCAGAGCGAGCTCCGGTAAACCCACAAAGTCATCATCACCAAAGTACA
++
+=>A?AB9><=AA9?>==:?4?@9=;8=;>1=?;8?:9=799;==<>;<3<
+@428_1978_162_F3
+TAATGCTCGGCCGACGGAACTAGCCCATACTGAGCAAGGGAGTTAAATTC
++
+@?>AAA=:AAAA?=>@==?=>A@;>>@@?===?<:9>?>?+?A@9;>?B<
+@429_320_1424_F3
+ATTGAGCGGGCGAACTGCGAGCACTGATTGCGTGATAGAGGGTAAACAAT
++
+BB?9=>B<=><BA<??@=;=:=A5=?@A>==AA48?72:<>>=??@:33=
+@429_498_1544_F3
+CGCGAGACCCATCACACGACGTGCAATCCGCGAACCACACCGCCCTAAAG
++
+B@BB@BBBB@BB@AAB@=AABBBBBBBB@@ABA:ABB:>BBBA@A8A?@6
+@429_517_617_F3
+GGCCAGCTCCGAGAACTAACCGAAAACGTCAAACACCAACCAAAAAAGGA
++
+AB?@BBBB@ABB@@A@BA??BB@@@??7@=BB?>?><@=@A???@B:<:@
+@429_525_1146_F3
+TCCACCGACCTGCAGGGGAGTCCCAGGGAATTGAGACCCGAAATCCCGCC
++
+BB@B?<BB@=BB@A@<A@??A@@>@5@:15AA:1:;>68855;-:2;474
+@429_566_873_F3
+TCAAACTACCGGGCGTAACAAATGGGAGATAGTGCGTTAGTCACGAGCGT
++
+B9BBABBBAABBAAABBB?AB@AAB@BABB=??@A9B@AA@<A?A=B=>@
+@429_627_1289_F3
+TTAGCGCCTACTGAAACTGCAGTGTCACATCGCGAAGGAGCCCGGATACA
++
+BBBBBBA?BBBB<BBB@@A@B@?=A@>>@AA??>?>B>:=A>===??<<B
+@429_641_991_F3
+TCGCCTGTAGACCTGCTTTGCAACGAGCGCGACTGCCCCGTCTAGGACGT
++
+B@@?ABBB@@AA=AB:BBBBAA=@B=B=@:=B=@<>B>?@7A@>A=@;<6
+@429_706_923_F3
+TAAAGCCCAGAGTTAAGGGACCAGGAGGGGACGTCCAGCCACCAAGAGCG
++
+/4<B?6=<B?=@BBA8@?A@<A??@8@>?>=A>@>8>=>=8?:A:6@>A9
+@429_820_1223_F3
+AATGGCAGTAAACACTTAAAACAAGTGGAGGAAACAGTGATCTATCACTA
++
+=?@B?BBA@>;@B<4B<A@@<BB=45A:2B;AA;0;B;=<@=@;:<576<
+@429_880_338_F3
+GATGTGAACCCGGAATTCCAACGTCACTGCGGGGATTCGTTTAACCCAGG
++
+A@A?BBAA@@?B>A@@A=?B?A8?;=A=>@@A?>?@A8;AAA=A<?<;>=
+@429_899_643_F3
+CACAAAATTCACAAATGACGGTACTCAATAGCGGAATATGACTGGACGAT
++
+?AB@6>?AB<=@AA@>@<A>=B@=>3@?@><A@@=>>?A=>;B8=@@6<<
+@429_1074_1497_F3
+ATGCAATCCGCGAACCACACCGCCCTAAAGCCCAGAGTTAAGGGACCCTG
++
+BBB;BBB?5B=BB+BA@@/BBBABB<@A5ABB@0A=BB5B<BA2@B?@2>
+@429_1244_262_F3
+TTCTACTGAAACTGCAGTGTCACATCGCGAAGGAGCCCGGATACAGAAAA
++
+BA>BBBBABBBA@B>>B?:B@@<>B;A7?B@B>;A?AB@@>><A9?6AA@
+@429_1264_776_F3
+CATCTCAATCAGAGCGAGCTCCGGTAAACCCACAAAGTCATCATCACAAA
++
+8AB@BBA@A@AB>?A@B@?@A@@>A@@@>=?>>>>A:@@:A=9@<6=2;?
+@429_1285_1614_F3
+TGTAGTTGCTACCACAGCCTAACAACACACAGACAGCGGAACTGTTACCC
++
+A@BB?ABBBBBBBABBBB?AABBA@<BB?A@B>6@=@@;BA@@>@;?B??
+@429_1292_826_F3
+CGGTGAGGCTCCCGTCAAAGGAATATCACTGCGGGCCGACCGATCACAGT
++
+>A@A?AA>?BBB>@@;:?3>A?@??7@@;A=?<<<>=;@??<?9?7<A2A
+@429_1304_326_F3
+CCACGACGTGCAATCCGCGAACCACACCGCCCTAAAGCCCAGAGTTAAGG
++
+=<B@??@ABA@ABBB<@@AA;@@A;8??A>?A@@=>@A@?>?@AB;@A@?
+@429_1398_1503_F3
+AGACTTTCGACGAATAAGCTGCAAAAAGACATAGGCCCGAGGAAGCGCTA
++
+BB?@BBA>A?<AA>B?:=9B@;AA@@>>?=<4>;@;8A=@<3@@=66>>?
+@429_1427_1475_F3
+GGGGAGCAGAGGGACGTCCAACACCGCTGGCATCGAATTAAAGGGAGTTC
++
+ABAA<BBA@ABB=A>@B@?@@A7@<@B3<>??9>=:?>?@<A297/<=@?
+@429_1568_890_F3
+TTAGAAGAACGAAACGCATCCCAGGCCGAAGTTCAAGGGGGGCCACCGGA
++
+@??@@@A?@@?:.=A:;,?>A45?<;9+?=@?7?:A<,?<?=6?<=;-?>
+@429_1819_792_F3
+GGCGAAACACCAGAGGAATTCACTACATGGTGGGAACCAAAGGAGTCTCG
++
+?@B<?AB>=>@B??A=?=@B@@>>>.=@;@@=>=?:=@?>0<>1=,-75=
+@429_1854_1258_F3
+TCAGTAAACACTTAAAACAAGTGGAGGAAACAGTGATCTATCACTAGCGA
++
+BBABBBB?A@BBABBA??@AAA@:7A?@?=>?@>;9A<>=@:7=5=>>>9
+@429_1876_126_F3
+AGCGAGCCTTGATCTCAATCAGAGCGAGCTCCGGTAAACCCACAAAGTCA
++
+A@AB?B@@>AB?@=@<>4A<A<<=<<>:;>?>?;@A>>B=@6=@<A7:=1
+@429_1899_322_F3
+AGGCCCGAGGAAGCGCTACACTGTGACGTCAAAGTCATCTACGATGGTTT
++
+>BA?@ABA<<=>@;=6@==5<@><;6=>=9=?;8;2??6A9=:0>=@<5>
+@429_1905_281_F3
+CCTAACGTGCAGCACACTACCCAGAGCGCGCCCCATTGTAGAGGCGAAGT
++
+<7B?5@BB@>BB?@6:;?@6>>?@87?@>1?@>@6@=9A<><<=2@?><<
+@429_1921_1124_F3
+GCAAGGCGACAGACACACAACAATCCGACACCATCGTTGGCGCAGTATAG
++
+@A?@?@A@@?AB@@=9A?=>;B@A?3A?8;;@=>>6B@:;5><?>>9?:=
+@429_1925_1090_F3
+TGTCGCCACAACCTGCAGGGAGACGAGGGACGAGAGCCCTGAAGACCTAG
++
+@BB<ABBAAB@B>BB<BAAA?B?AA:B@AA<A=B=7@A??<ABA>@AA>?
+@430_78_1025_F3
+AACCCACAAACGTAACTCTAAGGGGCGTCATACGCCGTCGTCGGTCTAAA
++
+ABAA@<AB@B?@BAB??@;A@?A>@?=B7@@<@6=>8@<<><=;<5@@@A
+@430_89_1672_F3
+GGCGGAGATGTTACCCCGCGCGAGACCCATCACACGACGTGCAATCCGCG
++
+B?B?9@B@>=A@B=>A>?A@B<@==?=?@;>7A?>53A;>32@BAB>6?;
+@430_131_637_F3
+ACCAGAGTTAAGGGACCCTGATTGGACGTCCAGCCACCAAGAGCGCGAAA
++
+8??<>>@@8B68>?9=A8?=BB<AAA>0@;@<<A<>A9B@>A8=:@=A?;
+@430_179_99_F3
+GACACCGCCCTAAAGCCCAGAGTTAAGGGACCCTGAGGGGACGTCCAGCC
++
+AB:B@@A>A@AA?B>==7B?@?<B><?9@;@@5A9@A;@>?>;B?<<9@:
+@430_392_28_F3
+CACACGACGTGCAATCCGCGAACCACACCGCCCTAAAGCCCAGAGTTAAG
++
+=BAA??=?@B@@@BBA:=B@>=@?A99>A:;=@3A?6>B@<@@;@A=@A@
+@430_491_367_F3
+AGAACTAAACCTGACACTAGCCAGCCGGGCGTCACTGCAAGGAAACTGCC
++
+@A?B?ABBA?6BA?@=??A@?@?;A;??<A<B/@A:@,@5=<>@9>3,=?
+@430_607_895_F3
+CAGTCATGCAACGCAATCACTTAAGGTGCAGGTGGTGAAGCGGAGATGTT
++
+7@?B=>BAAA>A?>>@B<:9@B;>>=B;6;?>A9:>?<>9>?=>3?B??9
+@430_688_525_F3
+GCATTCACTAGCGAGCCTTGATCTCAATCAGAGCGAGCTCCGGTAAACCC
++
+=AABABB?A@BBA@A>>@@@@A<?@:<@5>;?=>==:;??:;6?@=<=1=
+@430_691_1191_F3
+CTGCAACGCAATCACTTAAGGTGCAGGTGGTGAAGCGGAGATGTTACCCC
++
+?ABB@BBB@@BA??@A>@;A==?7A?@@:>@=?8@;@;<9?A>9=@<>?9
+@430_693_248_F3
+GACCACACCGCCCTAAAGCCCAGAGTTAAGGGACCCTGAGGGGACGTCCA
++
+2>BAA??A@A@B>AA<98@>=B<@@2B?=@>@<A?:A??>@?@B?>A>9:
+@430_821_1672_F3
+ATCGGCTGGCGCCAAGAATGTATTTGACGGATGGTCCATCGACGGCAACC
++
+A@?AAAAAA@=?:BA>B@>ABA?@A?B>:=@?<<:@>B=74@B;=><@65
+@430_874_1668_F3
+GAGAATTAAGGAAGGGAGCTAGCGTACTAAGCATACGGACGAGACACCCG
++
+A@AA>A@AB=@BAA@A@>@?B@=@?B@:A@?>:>A>=69@=@8A@@:/9?
+@430_900_444_F3
+CCCGTCCAGAAAGAGAGCCCCGACTCCCCAGGGCTACCAGCATAGAACCA
++
+=9??BBB@ABABA>A@A=@AA@<<A>A;=@AA?;A>@@:?A<B>@@A?9>
+@430_1055_244_F3
+CGATGTTACCCCGCGCGAGACCCATCACACGACGTGCAATCCGCGAACCA
++
+?BBBBBBBBBBBBBABB@BB@=<AB<>>B>9?<AB;:>BB@@<B?>3A@@
+@430_1080_625_F3
+AGAACTAGGCCTGACACTAGCCAGCCGGGCGTCACTGCAAGGAAACTGCC
++
+B=BBBBBBBB>BBBB@?BA@B?@AB>A@AA>A7A@B?+@7A>A?<B-=>@
+@430_1105_227_F3
+GAGTAGTACAAAGGACCAAGTGCAGGATCTGCCTTGTCAGCGCGAGCAAC
++
+BBBBB=BBABBBAAB??AB@=BA@A;>A;B>A??B5ABBA2@A:@??AB@
+@430_1195_1598_F3
+CCTTTTTCAACAAGAGTATTTAATGCTCTGCTGTTTAAGGCCCCTCTCCC
++
+@B@BBBBBBABBB@BBBBBBB@AA><6.=>@=5<BA4A5>@8A7B>48:7
+@430_1270_1392_F3
+CCTGACACTAGCCAGCCGGGCGTCACTGCAAGGAAACTGCCCTCGGAGTG
++
+BBAB:BBABB@BBBBBA>BBB?B-ABB>,@=B?8A>B=;@@B;->;@71A
+@430_1280_786_F3
+TGGTTTTCCATGCTCCGCTGGCTCAACCGAAGCCATAACGCGAGCTGGAA
++
+A>@BBBAA@BABAAA??@A@A?=82=A<;:@A=<6?@:90>A@:0A?>;<
+@430_1307_10_F3
+GCATCACACGACGTGCAATCCGCGAACCACACCGCCCTAAAGCCCAGAGT
++
+?ABB@BBBA@>ABB@8>ABA;@?B?7B<A09B?A>?A:B87;BB?<?AA9
+@430_1403_722_F3
+AATCCGCGAACCACACCGCCCTAAAGCCCAGAGTTAAGGGACCCTGAGGG
++
+BAABBB@@BABA?A?@=>@@ABAAA?A>>ABB<@@BB??A@>@?BA@@=?
+@430_1406_34_F3
+GAGCCCCGACCTCCCAGGGCTACCAGCATAGAACCAGTTCGGCCGGGACC
++
+BAABBBAB?>A??@><<A@:B@@?<>A4B:AA>A8@>A@=A9??5@@;>7
+@430_1531_1322_F3
+GCATTAACCTTCTCCCCTCTCCCCGGAATTTGTCGTCTCGTAATTTATGA
++
+=A-:=>B:<@?<>=AA:@:@@@=>@?><@BA@A;>@<>>??=<BB=;=6=
+@430_1586_641_F3
+TCCATAACGCGAGAGGGAAAGAGTATACGATCTAAGAATTAAGAGAGGGA
++
+@9A?BBABABBBBABA@AAABBA>BBA?;AB@@@B@B;??>B=<><:B2>
+@430_1684_261_F3
+CTCAAAGGAACGTCACTGCGGGCCGACCGATCACAGTCCGGATCAAGGGA
++
+5@?>?:@>?@4?><@6=?::9@8>91?99;9@:53.A;496:?8=/<=-;
+@430_1726_1548_F3
+TTTTCGACGACGAAGCTGCAAAAAGACATAGGCCCGAGGAAGCGCTACAC
++
+;BBB=9@BAA3AA@>4=A>?<A@@=8<?;@8@@>>2=>8A69>5>4<==<
+@430_1779_172_F3
+GGCAGAACACTGCTAGGGCGTCAACGTTGTTCAGAGCCAAAAACACAACC
++
+ABBBBBBBB@BBA@@ABA?@B>A??9BA=BBB@<@?B@AB@@@2@:B@9B
+@430_1871_988_F3
+TAGATGCTCTTGCTTAGACTCACCCTTTTCCCTACCCTAAAGGATATGAC
++
+A>A@ABAA<@?B?@B=A@<A?B=@+;A=>9:@A>47>??::>:=>;7>>6
+@430_1994_1381_F3
+GACTCGGTCTCAGATCCAGGAGACTAACCAACCTTGAGGGAAATTAAGAG
++
+@BBBABBAB==ABB@>A@A?A@B?A>B@=?@AAAA=AA@8;ABBBAA?@8
+@431_44_655_F3
+GCTATTAGCCCATTGTCAAGGCGACAGACACACAACAATCCGACACCATC
++
+>-<=>@@4:=>@?A:>=9=::::=:5<:<66=7865<9;<59=13:+<;;
+@431_50_371_F3
+CGGCCCCGTCCAGAAAGAGAGCCCCGACTCCCCAGGGCTACCAGCATAGA
++
+=AA@@AAAABBBAB@=@9@A@A@A?>B<??AA>@;?@?@>B?6=B7@8A@
+@431_274_859_F3
+AGCCCATTGTCAAGGCGACAGACACACAACAATCCGACACCATCGTTGGC
++
+=AAB>BB@@??BB@<?;?@<BAA=<<A?=;BA@BB=A29@<A;>-B@8=9
+@431_362_522_F3
+CAGCCATAACGCGAGAAAGAAAGAGTATACGATTCAAGAATTAAGAGAGG
++
+?B@?>ABBAA>B?A?@A@A@BA=A<8@>A?2@A@>AA?A?@<@A::779>
+@431_427_471_F3
+GAGAGCCCTGAAGACCTAGCACAGTAGAGTGACTTAAATTAGGGGAACGA
++
+BB@BABBAB@BB@B@>BA@@=AA?A>BA<B?A?A@.=7?@+>=::0<;:>
+@431_436_304_F3
+TTCGGCCGGGATTTCTTACCCAACACAAAAACCAGGACTTGTTGCAATCG
++
+9@@AA?A@A?8BBB;<B>>84B?><1A>A=7@6><3?>A65A:;:@<6>5
+@431_510_914_F3
+AAAGAGGGCAGATCGGGAATTTCACGCCCAACGTGGCGGGTTTGGAGAGA
++
+AB@A@AB@>A@?BA??=>AAAB=??=?=9>;@:>?1=<@:=@4=58<5@<
+@431_524_1355_F3
+GAAACTACCGGGCGTAACAAATGGGAGATAGTGCGTTAGTCACGAGCGTC
++
+BBBBBBBBBBBBAABBB@BB@ABBA@;BA?>?AB@A@BAB?@?A@@:><?
+@431_753_1184_F3
+CGGGAGCCCGGCCAGCTCCGAGAGTTAACCGAAAACGTCAAACACCAACC
++
+4=BBB@ABAB>BB@B@BB?BABA@B>BA?A>>?>B>7A>B@?=@<8?;?@
+@431_933_606_F3
+GCTTGATCTCAATCAGAGCGAGCTCCGGTAAACCCACAAAGTCATCATCA
++
+<<BBB@A?B@ABA@B;AB@A<>>AA8@=A@?AB@@==??A=@<8@=9>9@
+@431_1029_654_F3
+CGTAGGAGAGTCAACTCGGTCTCAGATCCAGGAGACTAACCAACCTTGAG
++
+@AABBBBBABBB@B@A@B?CB+7BB@@@A<BA=?@ABBB@A??=A=B<=?
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/bwa_wrapper_in5.fastqcssanger	Fri Sep 28 13:53:48 2012 -0400
@@ -0,0 +1,840 @@
+@853_7_53
+NNAGNCCGANNGGNGNNGTANGGNTNNATTGCGNCNCNNNNGGGCNNNCG
++
+!!14!3.15!!47!4!!8+1!$9!(!!,..1)&!3!(!!!!1/9&!!!,3
+@853_7_78
+NNCTNGGGGNNGGNGNNGGGNGGNGNNGGGGCGNGNGNNNNGGGGNNNGG
++
+!!##!###$!!##!&!!#$&!$&!&!!%&)'#'!$!#!!!!&)*(!!!&*
+@853_7_88
+NNGTNGGGCNNCTNGNNATTNTANCNNACAGGANCNGNNNNGGGGNNNGG
++
+!!61!5551!!13!4!!.,)!/,!3!!.)/17+!&!5!!!!-'0.!!!,5
+@853_7_132
+NNGGNGATGNNTGNGNNGGGNGGNGNNGGGGGGNGNGNNNNGGGGNNNGG
++
+!!$(!,#&#!!&#!#!!#($!%$!#!!#&%#$(!#!#!!!!)(*+!!!,2
+@853_7_141
+NNGGNGCCGNNCANGNNGGCNAGNCNNGGACCGNANGNNNNAGGGNNNGG
++
+!!54!9518!!1&!5!!/31!)0!6!!)533/:!5!6!!!!)/<:!!!,7
+@853_7_146
+NNCGNCACCNNGCNGNNGCTNGGNGNNGGGGGGNGNGNNNNGGGGNNNGG
++
+!!10!/240!!0)!2!!#&'!'5!(!!(.-*$3!*!4!!!!+#(.!!!.(
+@853_7_269
+NNCGNGGGGNNGGNGNNGGGNGGNGNNGGGGGGNGNGNNNNGGGGNNNGG
++
+!!%&!('#%!!#*!#!!/##!&)!$!!'$',%,!%!2!!!!3,,*!!!,2
+@853_7_321
+NNGANGTGGNNGCNTNNGGGNCGNCNNCGAACGNTNANNNNGAAANNNGG
++
+!!+$!+21(!!*-!.!!)#1!8/!9!!6,3+%6!'!,!!!!2&6,!!!&2
+@853_7_386
+NNCGNGTAGNNGANGNNGTCNCGNANNGAAGTGNTNGNNNNAAAGNNNGG
++
+!!31!:7-%!!:,!-!!21,!77!)!!227:9:!2!;!!!!)',%!!!86
+@853_7_405
+NNGCNAGGCNNTCNGNNAAANGTNGNNAGAAGGNANGNNNNATCTNNNCG
++
+!!<8!8;==!!;>!:!!7:7!7;!8!!7:>48=!2!=!!!!536*!!!;:
+@853_7_411
+NNCANGAAANNTTNGNNAGGNAGNANNGAAGGGNGNANNNNAAAANNNAA
++
+!!,/!13;,!!&,!+!!2/%!*1!$!!%*)+#,!,!&!!!!'-'&!!!++
+@853_7_445
+NNTANTGCANNACNCNNCGANCCNTNNTACGGGNCNGNNNNTGGGNNNGG
++
+!!&'!*+'#!!'%!&!!,%#!)%!(!!'##$&'!#!$!!!!$$#,!!!#$
+@853_7_469
+NNGGNACAGNNGANTNNGAANGCNANNAAGGAGNGNGNNNNAGATNNNAG
++
+!!##!*($&!!##!#!!%))!#1!%!!(,##$.!#!(!!!!##'#!!!&$
+@853_33_1583
+TATGTATTTCGGTACCGCACAGANCACTCCAACCCGATAGCGTCAAGTCC
++
+/&2%,)+,+:&#:;,5*)8/%19!,%*1/%;#<952%:27#%%&4.,#-1
+@853_33_1649
+GCTTCGTTCTAACTCCTACATGANGACAGAGCTGCATGCAGATTAGGTGA
++
+<9:<9<<=8866<888;87:<8:!24:8691=;)&$)#)$%%1$$#).1%
+@853_34_1182
+GTTAAGGGTGTTAGGGAACCCTANAAAGCCCGGGTTTCGTGGGGGCGGGC
++
+;7;5*982;:/;,46::69<4<(!4295.6144&::<4*.-+%$#.#,(#
+@853_34_1358
+GGCCTGGCCCGAGGGTCAACAGTNTTGATCTGAGGGCAATATTCGAGGCG
++
+<<??;=<?>>=<>>=<?>:=@;9!:><>:9<<=;<<=>,=8<:6;9<8/9
+@853_35_596
+GTGTTGTGTAGGCAACAACGCAANTATGGTTCAAACCGTTCTGATGTAAA
++
+:555079793528;282707:89!*;4;85:):<966.4;547203:978
+@853_35_669
+TTGTGCTGTCACGGCAAGGCGGGNGAGTTGGTGCGGCTACTCTCATCTGG
++
+#4(,,&5,'-2(&5'10&)&-&3!,)+.*9&););:,8)7&3<&,/1:)&
+@853_47_795
+GAAATGTTAACAAACCACTGAAGACTTTATAGCGTATTTTTTCATTACTG
++
+?<8;>>=>78<:6:<<&=>><)=;78)?9>/189A0/>>>A36,=<&7<1
+@853_47_831
+TGGATACACGTAACAGAGGACCGGGCAGACTACTCGGGGGCCGTCGGTGG
++
+.)/'0(,&#*#'#)#(#(#*(#'%%1.3#$-2%$&/#$(#'%'%(##%+,
+@853_56_1228
+GCTCAATGCAAACAATCGTTCCCACTGATTCCAACAACACCAACGCTATG
++
+=::<:?=?:>@=<><>=>87=<><)>97>=<=3=7=</9;==:67+9<6:
+@853_56_1324
+GGGCTTTAACGCGTCGGCACGAGGTAAGTGGAGTGGCGATGGCACGATTC
++
+5,(,)5+)57+94*,*3-#*4,2&2$2'(,2)-)22/)$23/1*)24'%$
+@853_82_2023
+GTCAGAAGATCTACTCGAAGGGGTTTGTTTACAGCATAAATAAGGTTGGG
++
+=7><8<=8<><;9<>=<77>>:>><=;>:?97<:3;;=</64:53:<969
+@853_83_197
+GGCAGATGATATGGACTGAGTGGGGGGGGAGGGGGGGGGGGGGGGGGGGG
++
+8;95;6:96698;6;89:3=%(-*$&(+$&#%.''+(.-%-/5.*.*4/5
+@853_112_119
+CCTAGGATAATACGCGGACAGGGGAGCTCCGGGGGGAGGGGACGGGGCGG
++
+7)&8327,(41&&),%1/)%+242(1,)')&15,)&05#$50,$$87&.$
+@853_112_253
+GAACGCTTATGGGGTCCGCTAGCTAACGCCGCCTGGCCAATAACTATAGT
++
+;9;97857&:;6;&983;4=83/,::2=,8;7(&<;/8+275(/9-1&(;
+@853_148_1347
+CTGGCAAATTAACCCCATTTTTCCGCTGCTATTAGAACCTCCAGATGGTA
++
+@>A<==;;<<?;A<?:7;=>;;76=6<84?3>6,<=3359>71;595</9
+@853_148_1509
+GCTGGGTGAAAAGGCCCCGGCTTCACAGAATGTAATTTCTAATAGTCTTT
++
+-'-:+&1.,)&&=(=)?7=<=4&,>:(;,&<))))8)+(,'&(4&,(,3)
+@853_157_314
+CTCGCCTGGAATTTAGCCATGGCTATGTTCTAGGTGCTTTGTTAGTTGCG
++
+79();(1<))&2(5+&8&+.9-'198,',))&&7&:*,4)(6&2&/:&77
+@853_157_582
+CAACAACATCAGGTACCCCATAATCCTCCTGGCTTAGGCAATATCAAAAT
++
+=:??::<>;;>:;;A;<;;>=?=<<<:>6==:?:<@<64:<89339==&2
+@853_158_402
+GGTTGTTAAACCGTCCCGGGCGTTATCCACGTGTGATACCCGCGCATGTG
++
+711&$(-)##.,&((&(4('83><-:94,'.;2&*:<0%&7,3#+02#(#
+@853_158_569
+TTCGTAATTATATTTGTCGGGCATTATGAGTACGGAGGTTATTATATAGG
++
+8>34:8.56,9/7<=-80.562,994:)3,<#%85(,#7&%,'#3#,#%&
+@853_216_501
+CCCTGGCCGGTCGGGTGCGTCACGCGCCTGGCGGAGCTCCTAGCCACGCC
++
+/>61=+11:/5/+/(&/1'%#:3&;&93(';0$4&*9,&/+))2')65.&
+@853_216_648
+CGGCTGGAAATCCTGTAACTAAGGGGGACCAAACTCAATGGGCTGCCTCG
++
+/6;/7;488)8:/;48788;57>85/99=35;677(7:90,2'41(%'&+
+@853_218_1907
+ATCAAGATGCGCCGATACGTAAACCTAGCCACAACACTATAAGCTTTGAG
++
+;53381<428:98:5::97/;;4:;;8996=4895<78589/8,6839(-
+@853_219_184
+GCATTTGCGACCATTTTGGGGTTGGTGGGGTGGGTGGCCGGTGGGTTGGG
++
+/&3&,)/,$)/&)2&#%(:/+#,*&$+$$(&1)/&+1##'&'#-,)&'%-
+@853_233_615
+TTATGGATTAAATTTTAGCTAATTTGGCCCCTATGGATAAGGAATCCCTA
++
+(7.1:154753447,222383647814041,3+,4.-/%+21((2)2'7)
+@853_233_834
+GGGAGTTCTAGTGGAGAGATTATTCGCCGCCAGCTGCGTTGAGAGATGAA
++
+=<<=;><:6:;<<3>=:=8>><<8;<=63;>99099&%,##&'2##%/$%
+@853_244_474
+GATTGAGAAGGCTGCAAACGGCGAACGACCGGGCGGCCTAAAACCACGGA
++
+)15$&/&*,&,,(&&0.,&,07:)/1/4&))96&)'/&''.(+&1'&)''
+@853_244_781
+AAGAATTTATGACACCGTATAGTGGTCCAGATTTTGACATTCGTGGCTGC
++
+8<>9:;>>68=7=;><<>7?:;>;=@989>9;>=?<298=<,,:75)42&
+@853_255_146
+CCTATGTCCCCTGACGGCACGCCGGGTCACCGAGCCGGGCCGCGCCCGCC
++
+5.)8&)'++7:',%'&&,(1)1/8'('%1)20#%,4-$.&$''(1(0(/7
+@853_255_403
+ACAACCGAGCGATGATACAATCGGTAATCACGCACTTATGTGCTGAGGAT
++
+<8:<?>=;9;>;78)>;99=<<;87=>?58;>=90<?38-:9+9&7>031
+@853_256_428
+TAATTCAAGCAGATAAAAGAGTGTGCGCCCACCCTCCAAGGAAATAGAAA
++
+2=<66<=>6::3<,8;>:3<3825,:1:98897,057::24<986:+,::
+@853_256_834
+AATGTCGCCAAAGATTCCATGGCAAACTTACCGTAGGTTTGCCAGAGGGC
++
+'%&#)##########&##$&$####&#$##############$$######
+@853_266_697
+GGAACACATTGACAGCTCCCAGAGATACTTTCGATCAGACCATCTGCGAC
++
+9;:==>??9;:=;;;:;;:<>8<<9:=8=<;>99;5<6:;8=;580::;9
+@853_266_1092
+GAGCCGGAACGAGACAACCCGTTCTTAACATCCACCACGCGTGGGCGACG
++
+;)2))/8%'10:712<67<3(39</68/5)6&')/170&49)6)//,)&&
+@853_279_1056
+TGTGCTCTTCCGTCATAAGAGAACCTTAAGCTATCACGGACACAGCGCCG
++
+:;76;:=;:<7::;<<<3<76;:<9=<5;87=3<=5@3<7388771:;5<
+@853_279_1330
+ATAAAAAACGGAAGGCAACTCATGCTCACCGAAGCAAGGGAAGGAAAAAG
++
++<.)4)9'-<->&$<1#$#1$$(%32)+'5,#1#9362#451%%711,%7
+@853_292_158
+AATGTGCGTTTAAATATTCGGTCTTGGATGCTGATCAGCTAAAACGTATG
++
+;=;;9;>>89=><94<;>9:;:896;;<8;3<<177=:5<6=:73<:9'9
+@853_292_700
+GGTAATGAGGAGAGTACGGGGTATAAGCTTGGGGGGCTGGTGTGGTGGGG
++
+=9;<9=;>;:8<;>&+47=5176<28:6<./:66/*'4:)%++/#,/&.5
+@853_365_890
+TGTGGGGGGGGAAGGGCGTCCGGCTAACGTCTCGGCGGGTGCGGGGGGGG
++
+<:7:=<;;;<9==><<;9<>:;>>;:;7<;<68(-#6+1&5,(4'2'.*2
+@853_365_1447
+ATGGTTGTCAGACCGTATGAGTATGCCCCACGGCTGCCTAATCCAATGGT
++
+6<7(:;:9)7=79+5;8;399;06<9703:772$8#&$&##(#$#$###$
+@853_368_1718
+GAGATGCGCCGATACGTAAACCTAGCCACAACACTATAAGCTTTGAGGGT
++
+:A98;;/:>:>5<;@=;>=?><<<>>:<6>=7>:<85?>;3;<:;/7;78
+@853_369_74
+AGCCACGGATCAGAGGGGGAACGATGGTATAGGAAGGGATAAGTCGGGGA
++
+7:9875:8:7<69;78.$2/9&)6%0-$5)96&879'$8,&(/))6*2&(
+@853_375_367
+CCGATTGTCTTTCTGAGCGCACCGAATCAAGGTATCTACTAGCATAGCAT
++
+'+);,18&&&''),2&))4,%/1&5.1+-'/,'-1()))&'*)'+)&/&)
+@853_375_856
+GTTTACTTGAGTACATCCTCAAGACTGTCTTATGCCGAGGCTGCCTTTGA
++
+8<;;>??83=>;63:@:?9=@<=>8@:?5?>8=1?;98;9<>4&40&2(%
+@853_381_1334
+GTTACAGCGAGAACGGCAAATGATGCCACTGTGCTGCTCGGGCATTGATT
++
+8>=9>9<98=:9@;@><>?<@=7??><8)=@>;:==9=8=<==7<)6/4:
+@853_381_1648
+TTGCAGACTAGTTTCCAGGTATATTTTTCAAAGCCTTATTTTCTTTTTTT
++
+986+0<95:8;(>5<<)58?,4)8;<5&,9/),()35)-3&7(&832$&/
+@853_383_962
+GCTCATAGCGTAGCATATAGTGGGGGTTAGGATAAAATCGTCGTAATGAG
++
+>;;58@<75::477$5;8;%:;>:177@4*59=5&6;@4-7;73//;9:,
+@853_383_1666
+AGCGTCTTACAGACCCAACTTGAAGCTTGCAGGAAGGGGCAAACCAAACA
++
+,,('6:.6-&7,(=15&%&<&&1(/16',.(1&&8($$&&+&)76,5815
+@853_389_1983
+TACCGTCTTTCGATTGACCGGTCGGTCGGGGGCCGGGTGTCCGGTTCCGG
++
+,&9):88.&'&&/.&4&%4(6#$4531,)66,.2-51#'2/&'5845,8.
+@853_390_660
+CTAAGGCAACGTATTGGTCGCCTTATGGTAATGGTACGTATAATTAGGCT
++
+>8A==;<<<>;;A98<;:<=>;9;=;;;;>;8<;;@5;:81=:894;:),
+@853_392_1916
+GCGCCGGGGTACAGTGCAAGCGCGAACGAGACGAATTTGGGGAGGGCACT
++
+:<=<<<>>;>9<28A;<:*;:=95889<.:8;>34;6)%+6;05&::1+1
+@853_393_183
+TCAGGATGGCCGTAATAATGGTGGCGTACACGCGCAAATTCCTTATGCGG
++
+=>;<<=*;4-;+9':>$427:&972<)71=;*793<1<1:;:7/9=)7/;
+@853_397_1746
+CTCTTGGTCCAATGCACCCACTATGCGGATCTTGTCGGCTCTGGTTGTTG
++
+5,;2+22,58<:25-=94<)44,2,884:,7,)22441018.#,(1#,1*
+@853_398_593
+AATTTAACGTATGCGGTTTTCTCTTCTCAATCCTCACACCGGTAAGAACA
++
+(=714-?,:<,91)717878<7/9396=51,<<=,)/;8=5,:/8;7813
+@853_423_1430
+GGGCATGACACCATCATGTGCGACACGATCCTGCAAACCAATTATTGTGT
++
+68<:>;:;<:<<<;<;;>=:8;>:=8=<:<7::<;59<:11:,)+0&<3/
+@853_424_115
+CCCGATACAGACCATGCGAATCGAGACGGGCTGTCTCCAGTCCAACCCGG
++
+6>8:8<;>7?;;<,7>>;;8:<=16;:789549$%&6)'040$('%0''2
+@853_439_1980
+CAATCAGTTTATGCAAGCTAAATCCCCGAGACTGAGAACGAAACTCTCGG
++
+,<='0/71(/:.;2<<9:5>7?2<8<=9987;51?*=>:(7;<,()&:6/
+@853_440_379
+ACACAAATAGCGGCGTCCCAAAGTGCTCCTGAGGCGTGAGACGCGACGGA
++
+9=8<5:8<:3<>97:;8<98=998:<:;:7;9:5+;07</663:7:8=<6
+@853_443_704
+CAAGCGAGGTGAAAACAATAGAAACCAGTTCAGCCCAACCCCGCGTCGTA
++
+=;5:>>9;9?A:5<8<74<<=:4;;?<8<==:;:8<:9=:-)/(/)6;7+
+@853_443_1353
+AGCCGAAACGATTGTCGTGTAAAGGCGTCCGCCGGGTCAGATCGAAACCG
++
+921/5>7972<889;:;9:3?>5;/95<509=7.878/4/;:.28;9/3(
+@853_458_262
+TTACCTGCCTCTCCCTCGCCACTTGGATCGCCGGCTGACTCTACATTACA
++
+<;:=7:;;<8<=8;=<</<9?<9::<<:;9;;84:91#2&%,-($&&%*%
+@853_458_615
+TTGCTGTTACTGAAGTCATACCCTAAAGCTTAGTATGCGCGTGTGTCAAG
++
+97899::;:<<:;;;<::9;;77:;;/8:=<6;86;34;;8695;:+5:<
+@853_489_665
+GAAGAACGAGGTTTAAGATAGCGAAACCGCGACACGGACGGTAGAGTGGC
++
+?::=-->4%&22=8)3<1;7$//6#)=(:%%<2(*,4,;7'92832:$9)
+@853_489_1193
+CTGTTTACTGTATTTGCAGAGTGGAAAACGCCATTATGGATTATACCCGG
++
+=<=>=>>><?=2?=<>,>=>=5>===:<:>=)?;<92>55=)><;60@58
+@853_557_600
+TTGCCCCAAGATCGATCTTGTCCCGAAAACGTAAAGGGCCCGGTGCGAGA
++
+&+&))(51(,1&&:'7:&)=.8),/5034&.&31&0.&-/$3'&)&1&1,
+@853_557_1176
+CCCCCACTATATGCTTCCTGGGAAGGCTGGGGGTTACCGTCACCGTCCAC
++
+>;@>97>:9:><>8=@<;6?=>@5A=:?<<>9;9?@9<7==3:59=<<,;
+@853_558_962
+TACTGACAAGATATTGTTACACTCCACTATGAGTCCGGACGTGACACCTG
++
+@=@<===<<<<9:<><<=;?@9=<>>8;:?<)4;<<5:;>;/<:<=;2:9
+@853_558_1569
+GCTACACACCCCCGAGCGGCCGGTGTAGTCGACGTGCGGAACGGTCGTAA
++
+(?16:=57:=779:995@=9?<?:>3<??=?339@?@;<@3?:8>><53?
+@853_563_1263
+TATGGGCATGACACCATCATGTGCGACACGATCCTGCAAACCAATTATTG
++
+;?:;?>>?:>>>>9?>=::?<?>>=<<<===:=9<?=<78;=58891,8;
+@853_563_1776
+ACCTTGGACCCCTCCGGCAGCATCGGACAAGACCGCTGGGTGGTCTAGGG
++
+=A><?@A:AAA@<>AA9@==?96AA=69;<>8A3>;86&?:;6&<>7??<
+@853_584_1986
+ATAGCTTAACCGAATGCTTTAATAAATTTGCTGTTCTGAGGGCGTTACAC
++
+,:)155*-9#7,;,)'232.:1(4,7#$3#97$%$,''+$,2(##,#%#(
+@853_585_542
+TAAAGAGACGGTATCAACCCCAACAAATTAGCCAATCACAAAACCTGCCA
++
+:<><>99==8:::?<;=<?A===<<:==37;><<7=;8,><>9:1=6:15
+@853_585_1153
+GCTCACGCCAGTACCCCAAAGGTCAAGCCTTTCAGATTCCGGCCTGGTTC
++
+87?><89<==9>868=95:49<>7;:96<,:=;-1::::64;58/9;;)1
+@853_611_981
+GACCTGAGCAGCAGTCGCCTGGAGCAAGCCGGCCGATATAAATCGATGCT
++
+85275/655287&4<7<5889<176837797:835.6&44427/'48$71
+@853_611_1451
+TAATAGCAGCATTCAACTTTCCTGACCTTTACTACTACCGAACCTATGGG
++
+28#'%)5/,)46%-#28,4,/;00,'6,/'-;4%(#9,###:++'.9*##
+@853_626_841
+ACGGTAGCCATGACAAACAGTTGGGGTATGCCTTGCGTAGGGCCAAGGAA
++
+A?@??A>@<<?@>?@@AA5=?AA@>8>83@>>>7A;:7,=<@<;69@A63
+@853_626_1431
+TGGGTCAATGCCCTATATGACATTAGGTTCGCGGTCGGTAACGAACAGCA
++
+11-/8<:967:;959<<:5:<21781187057585;;*6-5$%8,2&%9$
+@853_628_1041
+TGAGCAAGACCCGTAATCTACAACGACCAGCGGTTATGACAATGTATAGC
++
+978:5,7295,/889'529//,,:55227($128:'9*83,4&29&,%57
+@853_628_1976
+TTCCGAGCTGTCACTCAGCGCGATTACCCAGATTCACACTGCTGGGTCCG
++
+<@<:=9;<=?=968A8:<:<9<.>?8:::7<1=;0:95348/9$&&,-&-
+@853_630_585
+TAGTGTCTTGGTTCGTGTAGAAGTGCCTGGCTTAGCTAAATCGAATTGCT
++
+15/,/(/))=&,)>,):(>:<=/,)/3>:,,49/(6)/;/',.11.+9'4
+@853_630_1363
+ATAACAAAAGATTGAGGCCCATATTAGGTATTACCGCAAAAGGTGAGACG
++
+A@A=AAAA>A?@><?>@AAA8=:A@:?>A89:@>?=<?=@8A;;=59@8A
+@853_648_1618
+GAAAAGGGGCAGAATTTCGAGGGGAGTTAGGGCACAATCCCGCTAGCAGC
++
+&?,//&6(=77)):,)7.)933<)4%=:-8,831885//@3@:154',&3
+@853_649_292
+ACCCAACCCCCCTTTTTCTCAACCCCCCAACCCCCCTCTCCAGGAATTCC
++
+:9>;;:>=;;?>;;<:75<=89::<:=9;5::?;:=28;<804;2754::
+@853_669_616
+TCTCTGATGACAGTATTCATGTCGCTTGATAGTGGAGTTGCATGCTGGAT
++
+:=<=>;6<;>?1:9<@;7:=;693;A056A5/;5<5:>8;74;5=@111?
+@853_669_1548
+TTAGCTAGACATTAAACCATCCCTCTCATCTCCGGTTAACCCCGCCAGTT
++
+=;=<<=<<;=61:977/7;:96::<8.7<8;39:;976;;63)9;1+2:1
+@853_678_1204
+GCAACCCGTACAAGTACAAGTACAAGTACAAGAACAAGAACAAGTAAAAA
++
+)=1=89;35:6:=:6;9A<5361?>1/6/=<'/;,A=&,:&>=/(5&A7&
+@853_678_1908
+TAATAGGTCGATAACGTTAGAGACGTAAGAGGAAAGTAACTGCCGTCATG
++
+8@?:57<:::?;=><=:<?:@=?>9=@=97?;>=7<7?:66<:;:9;=83
+@853_718_1061
+TGGGGACGATAGTGTAGTCCAAATGAACACGGCTGGTGTCAGTCTGACCG
++
+=A>?@???<@>>@?=>>@?>==8>=>??<7:?<=?<76=<87<5739;=:
+@853_719_183
+ATTTTAGTTTACCTTCTTGAGTTCTACCTTAAACTTTGACCTCCCACCCC
++
+)/31.$%5'/#)',4#)'+$&7%%,&)#&&#%($$$$$%###%$'.##)'
+@853_775_1932
+GAATGATTAACCACCTTAGTGAGGCGTATCGAGAAAACTGCTAGAGTCGG
++
+<<,3=;6</,:<=::8:>;>99;@<>:;?<;><>@;:6::9=7:,6;1=@
+@853_776_924
+GGATTGTTACGTGCGCCCTATACTGGAACTGACCAGTCATTGACTGGAGA
++
+-212<+87/3582?/4731,<2(A:956/<3148*:7/28069392;:7/
+@853_815_1179
+ATTCAATGGACTAAATCCGGGACCGAGGCGCGTCTGGCAGTCGACAGCTA
++
+67827:>5597:=:<6<,224348025,71:879724,2(7/29)92222
+@853_816_193
+GTGGTCTGAGTCAACCTGTAGATGTTTCGTGCACGATAACCCAGGGATTC
++
+><><<;<@;9;>;=::>:==8<::=8>7<<:</=<8=@<?878>?<6?<6
+@853_827_2017
+TGGAGCTGGTACGAGTACGCACGTATGAACTTAATGTGCCATACGTAAAT
++
+:>8?<<:97;666;<7:88;=9<<7;9'4,:79<6:9:4228):090/+2
+@853_828_1138
+TTAAAAGTCATGAGCGTACAACACGTGCCATCTGTCCTTAATACCTATCA
++
+&)&$&)&&&&)&&%&&&&)&'&&&%&%&&%%&#&&&&&&&&&&%$&&&#&
+@853_843_799
+CGAGTGCAGCGATAATACGACTCATTATCGGATTCTGCGTCACACTTAGA
++
+:A@AA@:A;;AA>4?@@>/<AA=3>A9?)@@==77=<<0=?<:,7>8356
+@853_843_1357
+AGACCTGGCTACAGGGTAAATATCACAGGCAAACACCAGTCACTGCACAC
++
+<?:;===>:A=:>?>>A:<?@:9====>/=:;:5,<9>5797833<89/6
+@853_844_231
+TTAATTCTAGGTTTAAATGGAATTAAGATCCTGAGCCGGCCAAACCCGGG
++
+&&8151/>,/,/8,(?<=&('(?/;8&8))<?11=39%718,$,./9*89
+@853_844_634
+TCTATCCACCGAAGTCAGTGTCTGAAGTCTTAGACACGTTCGAAACCAAT
++
+7#56860817:11777)66,9&>7%;188/87,9&5608#9.764682%0
+@853_877_1974
+TTGCCGTGAGGCGATTGTACCAAGATAAAAACAAAATAACCTAAAAACAA
++
+*,*-4'#)74,',)(*##,#&#+#%##&#$'##%##)(#$%##$#(##'#
+@853_878_1093
+GGTTGGAGCGGGATAGCAAATGAGGATCCTGTCACAATCTCCCACTCCGA
++
+@@/&3,(,,5533/161?@57/1,3>3<<8>53)65=1)735,1A<;:8@
+@853_887_1933
+CGCACACTAGTTGTGGAGTTGAGAATAAAGCAACGGGGGGTATCCCAACC
++
+<;5?;853'::89/<:>=59<?<9;9<A<=>><-9<<;895=9,57=?4:
+@853_888_1016
+TACGGGGGAAGGGCATCCCGACGTTCAGGGCTCGGCACCACCCCAGAGGA
++
+&(,,//6)))'<&/9&')/,,)(,&,&&9&<)/'3,),/&&)7:)(/),/
+@853_943_830
+TATTTTTGGAGTACCCTCCTGTACCAATAAACGTGGCCCCGCCGGGTGCA
++
+61)5/6,34'20)%@#)#<%#$<)6+33&6&')4&0'0*(#'215.$'9/
+@853_944_156
+CAATGTCCCAGACGCAGTACTCAAAATTCCACAGTCGTACCCTGATCGAA
++
+;;==<<A>>>??<8=>::;?=A=<==>:76;>;.99>91?<>:.=<>3<:
+@853_946_129
+CGGGCTGTTTATATTAATGCTCCACGTCCTTGACACGCCCATCTTTGCCG
++
+>?A<>:><5>=>9=<>9?<>:=;8>9=>8>;<;/;:>@:?3:9::?4815
+@853_946_1345
+GCGCCCGCCGTCGGGCTGAAGAGGTCGGCCCCGACCGCCGTCACCACCAG
++
+8386936:688649:8;80:8#,#/,#1#-3#,#)4)2#42)&&12'2%/
+@853_967_1892
+TATAATAGGTAAGTTCTGCTCGGAACATATTTTACCCCATTCTGCCTACC
++
+8;64;9:878<=<9;:8>5:;9<>:;>769&;1://6&8;):1890:471
+@853_968_485
+CCCGGTCGTCCGTTTGCGGTAAACGGCAACACAAAAACCCCAACCTTACC
++
+<=?;>==@<;>;<=><<?:<=?>=;?<>>=:><>=>7;>>7;8<::8:><
+@853_968_835
+ATAAGTCATGGATACGGGAAAATATCCTTAATCGGCTCCGGCGCGGACAC
++
+6A;<:<?:>:@=><>>?;>;<8>>=<::>9<<5<==<:==<84>;=689-
+@853_968_1657
+TTTTCCAACAACGAGCTGACTTTAATCAAACCTTACCGAATGTTGTTATG
++
+;::88<9<99;8<<6<63##+$&%*#&,#####($#$#,*$##)'&)%%&
+@853_985_616
+GTGGTGAAGTCAGCTTGTGATATAAAATTGCCGCTGCCCCGAATCCAAAA
++
+A?@><9AA>??A@A8>@?<?;9?A<A<>=>?<=><><<@5@>7=9@?;>;
+@853_985_1608
+TGTAAGCTATTGATTATACGCCCAGATGGACAATCGACAGGAAGGGAGGG
++
+<:99:7<::<:>,<<;=:<97?5/:/;:2::::58<921;>:::<=19=<
+@853_991_1890
+TTCCGGCGCCAAAGGGCATCGAACGTTGGGCTAAACCGTGGGACGGCGAC
++
+<8::/7A83(0)859;1;9663;18=?==>,:;7)68(/664'6%:9$'*
+@853_992_1006
+GCTGCACATTGCGCGTTAAAGCACGTACACCCAAGGCCTGTATCCGGGCC
++
+5?<47@86=66>247>==7=<58<6>81:<:89=7;>6<7:288369/88
+@853_992_1044
+TGCGTCGTGCGCTACTCCGTATTCCCCGGTAGGGGAACCTCGTAGGACGG
++
+&/5-<)&(':4+<3838&&4&7'1-17&,/11044//$&,%8,%$4,-%#
+@853_993_143
+CGGAACGAGGGAGTATAAGCATAGTCCCGCATCAATAGACCTATGGATTT
++
+<788::9:8:77>3,6;<768:?:39<=:611>9751:;8:55895(>;3
+@853_996_488
+TGCCCCGTCCACAAAACTCTAGACACACGCCGACCTTGGCAAAAGAAGAA
++
+.&'6,#*<(%'8('(,8.4'.1*9)81-0(*0$&2+-)5,0/,1*21#%*
+@853_996_1656
+CACACTGCGTCTTAGGCTATTACTCAGCATAATAGCGACGTGAGCTTAAT
++
+7A;9;88;598:88;:::9=:;999;;74=7=;;8;9:6:;8:86&43:6
+@853_997_740
+GGGGGGAGATCGGTCGTCCTCGCGATTCGACGTAGGGAAGGAAACCGAAC
++
+9&5;'.1')&(4&2&(,'))=&,,-.&+,&)(.,7/2)(4/-'95,4,<3
+@853_1026_2018
+CGGTCTCCGTACGACGATACGCTTTACGGTATAAGCCAACTGGAGTGGGT
++
+6<7=7;6,7=(6928:#;#.8#$'7###4(%/#$.'')0'3$(&)&(2**
+@853_1027_1303
+GAATTATTCTTTTTCGGCTTACTATACACTTTACTAAAATCCTTAAATTA
++
+*,10,,;0##3##&#%&#&(%##&##$&#%####%%&$#&#####$##$$
+@853_1055_941
+TCGTTATGGAATTATCGATTCCGCTAAGCACTCGGACCCCAAACGTACCT
++
+AA@<@@AA=?@AA?@A@@@@?@A8>>@A><>77=>>=>=>>?=A:<1>8@
+@853_1056_37
+GCTATCGACTAGTGCCCCAACCCCCCTTTCTCTACCCCCCACTTTGCTTT
++
+:):6</60'42;;,&51:'0:;5/6;9;1155,461:)*-&,&,&&74&(
+@853_1075_559
+TCCACATGACCTCTACAACAGCCTAAAAGTATCAAGCGGCCCAGGTCAAA
++
+86*0.#&1*,4#2'&/'%1)152+02'9#))&)%&*&'%+*0#'#&-.$0
+@853_1076_58
+ACAGGTCTAAGCCCGTAAAGTCGATCACGGACGGGTCGGCTTATATAGGC
++
+78=89::;::8<:3<<;<9<8948;73:<<59::8:96:=(67881599,
+@853_1091_1124
+TTGCAGTCCTGTGCGGGGCGGCGGATTCGCTGCCTGTGCTGGGGGGTGGG
++
+6;;;<===<@9?4:A<>9=>8;=<6=>/5578))2.&''(&%$$-+./$,
+@853_1092_230
+GAGACGAAAAGATCCAAGAAAAGAAAGGCACAATCCAGGCACGAAGTATC
++
+1)>,3&3;//,2=-9(7=2:+5;/)*4791%76,93595+%587/'8/)0
+@853_1094_215
+GCGAACAGGGACGCAGCGGTGAACGATTTTCGCCTCCCTCACCGACCCCA
++
+8;8.,:/*2./:*#3.2+2'(82&)$&266#4)(2/'*%1%$4'1*-:.3
+@853_1094_1720
+TCTAAGTAAGCCTAGCGTCCCTCTATGCTGTAGTGACCAGAGAGATTGTC
++
+730,<8814/7479>7<7/1=;/:)=2;;,<<<;55=;7<==8/,:;&7'
+@853_1138_1582
+AAGCGCCAGACGTGCAGCAGGACCATACACTTTAAGTGCCCACAACGTGA
++
+:99=?776;919@=<7=;:>799:97:=9:;5=979.;9:4/:919.>7<
+@853_1139_914
+CTATGAATCAATTTGAATAGTCGTCTTAAAATATGGCACCAAAAGCGATC
++
+<(),)&6:$&>'8)('$&5)$*'#+'1#.6,)#$1&('',&6&+',&&+/
+@853_1144_824
+GCTCGCTCTCAAAGGGGAGAGGGAAAGAGCTGCTGGGCTGGGGGACCGTT
++
+'(')%&,:4'.+4.:4(/028:9;:;01:;/6-(8344)/#++1),&9)&
+@853_1145_305
+GATGTCTTACACCTTTGAGTACTGACAGGAATGCTCGCCCACATCTGGCC
++
+=?=<:><>>?=<;;9:=>=<>><==<=;>?=;==8:=;>=6>388=>;=<
+@853_1148_420
+CGAGGAGCTGAGATCGTCAAAAGAGCTGTGCGGAGTGATTCCACCAATTA
++
+9;8939<<:5:>6=)8>:;64;<925;#25,:4618;1962<%.*3:3:2
+@853_1148_1437
+TTTTCCAGGTGGCGTGTCCTTAGCAGGCACTGTGATGCTCCTTGTTTAGA
++
+3875((77'%//28,(884:9/(;$59(03%%(5$'%+)$)&-.7513(4
+@853_1149_239
+CTGACCGCTATAGCGTGCGGAACAGGGGGGCCCTCTTCAAGCGGGGAGGG
++
+3<51,*1*)88&%:1%+)%8'$//0.15*4';195/&//'9;(&38)7&-
+@853_1149_1929
+CTAGTACCACCATTGTAGTAACGAGGGCCGTATTTAGGAGGGGCGCAAGG
++
+><:<=98>;;>=<>><@@==>=A=<<;><;>:><>9<?<:><<<;>;<><
+@853_1231_1371
+ATATCTCCTTCCATTTCTGCCTGCGCCTATGTCCTTTTAGGGGTGTTTGC
++
+,/0,.#'#$954),&#-',;.*##*(*.'82#$#2*$*#(%%&###,'#+
+@853_1231_1635
+TTTTGTAGATGTCCAACTGAGTCTGGTAGTAGCTTGAGAGAGACCTCCAT
++
+<:<<9=,:9;77:;9949;59:.=;:8798937;977<53*2654<095;
+@853_1232_516
+CCCCCCCTTTTTCTCAACCCCCCAACCCCCCTCTTCCTCAACCCCCCAAC
++
+586))'&,(*'&(+)&&.5/)&)5*-&/4,&&&4&&&'/0)&16-/%,)4
+@853_1232_940
+TAGGGCTAAGTGTCGTGGCTGGCCCCCAGCCAAAACTTTCGCTTCTACCC
++
+>175()<>>1&','95'/A&3,/?315@,&/',,,&&5,3/&1)&1'1<'
+@853_1236_169
+GGTGAGACGTTTATGTCATTTGTCAGTGGCCCCGCGCGTATTGTGGCGAT
++
+=<?5,5441<:<2:,:6,=8:789555:4,65:599236(;<$8*.-2,8
+@853_1237_10
+AACAGATAATACGGCCTGCTTTGAGGGCTAACTAAAATGGGTCAGCAAAC
++
+(,,;/)&5/()&=)3(&;<:3)=3=)/=&=-.8,9;<=5;,&141<,;/<
+@853_1242_1158
+GCATAAGTACACAAACCGCAGGTAGGGACCAAACCACAGGATGGCCGTAA
++
+A=5:<A;9;>:?=96?@;8>9>;:<=:=;<;?>;:;:==;>51:/)11=<
+@853_1243_871
+CTGCGGGTAACGGGATGGAGAACGATATTTGATGAAGGTGGACCAACCCG
++
+1),)*=3/4=,9<?,%46//./+1,&1/1,)<)8&,/7(>79,);668);
+@853_1265_969
+CGGCTGGGGGGGCGTGATGCAACGTTAAAGGGAGGCTCTTGTCAAGAGAA
++
+$<)'(')1.8:)()8(,&<//55,'&3,))'846164.001-/+381/72
+@853_1266_828
+ATGGGAATCTAGGGCCGCAAACCTTAGTTCGACTCTCCCCTATAAATTTT
++
+9?A?AAA@7@?>:8>>AA<@>A?>==?>3?=@<9=?A==>>,7&<;4>,:
+@853_1267_170
+TGAAATCGGGTTTATGCCTATACCGAGACCGGGGACCAACTAGGGACGGG
++
+30:65905%/#52:2&3(7,532).4;,,+&3$+-(2)50*&0%'&1(1'
+@853_1277_1774
+GACTATAAGCTTTGAGGGTTGGAATAAATACGACATTTGTTTGGGGAAGC
++
+>@?7@?>>?8>;;=?><>?==<?,<3=><35<A>6<7<985;<9778@:,
+@853_1278_1160
+AAGAGCAATGGGAATGATCATGCCGCTGCGTAATGGAATGGAGTGGAGGG
++
+A=<<@AA?>@@@?;?>:>A?>?AAA@7<<,,&//1(+)&9+&&&85(1&9
+@853_1280_287
+TACGTTGAGGTGATAGTTCGCTGTACTTATGACAGTAGTCTCTTAGCCGG
++
+><?>@AA:=>AA:>==?@A@;@<@<??>;>=9<<<?<<?5@9?=:6?9:=
+@853_1280_1640
+TGGTAAGACTCCTCCTTTCGGCCCCCAACCCCCCCCCCAACCGAGCTGCC
++
+A;?<;<@<<>>A=44:??:<>:=74<:>48;=583==9/8=9:228122(
+@853_1280_1971
+TATTTGGTCAGGGGCGAGGGCGGCGGCTTCAATCTTGGGGCAGTGGGTTG
++
+)9177)6,3)):16&'/,1:6<()?))()(>5><(1=<?1.&)>/6&(1,
+@853_1281_1171
+AGCAATCAGGTGGTACACACAAGTATACATCCAGGCTGCCTCATCAGGAA
++
+<@:<?;A<:?=A=/:=<?<<>>;9:<=:>94<:3;151*'&2:%(%&)+'
+@853_1289_1050
+TGGGAAGTCCTAAGTCCATTACAGCGAGAACGGCAAATGATGCCATTGTG
++
+75933<740)::053<:7;&>7;:#4>4475:9/3<<72.9883)&77&2
+@853_1290_58
+ATAAGAAGGGGGTTCAACGGAACCGTGAACGCCAACCGGAAGTTAATCCC
++
+)<:<;9:>9:6==<90;<<9;;=98<;=<:1=<9.7<;6<1;>8;;<9<5
+@853_1297_514
+CGGATCCGCTAGCTAACGCCGCCTGGCCAATAACTATATTTACTTGAGTA
++
+=>>3@9=99==>;1;;=<8:8?039;<718<8-6:6<39;=69:=5;411
+@853_1297_1934
+TAATTTAGGTACGACTAACTCAATAAGCTAATTGAATGAACTAGGACTTA
++
+#&6##)0$)#4)#2##44&###7%/2##%1+#$,#*###$##5$#-###,
+@853_1311_394
+CACGGGATCCAAATCGACTGAAATGGTTAGTTAGGGAAGTTGTCAAACAC
++
+&5,,5,78&8/>?9A3??8@>@A:==?>:?<=@<?:>?<:/;>?A@?<)?
+@853_1312_213
+TCGCGAAGGGGACCCGTTATTTTAATAGTGCAGGGCATAACATTTAAATA
++
+6?;==?@<<==A=;=<;8;99:8:<6>:6;<=:3(9/7986)5(./27&=
+@853_1321_1372
+CTTTAGCTCGCCTCAATGACCCGAATAGCACCCAGAGCAAGACTCCGCAT
++
+5,7),=/'16=1,,':&,5);118181/18<'6;6/1@9,<9)>,,,&>(
+@853_1322_846
+CTGAGGATTTAAGCCAATAAGACGAACGAACCGAGAAAACTTGAAAAAAA
++
+2;;;::5;#44)5-74,816;#0-4('(-5,$&-;6($'27,-14:&8'7
+@853_1359_649
+GGAGAGGGGCTGCAAAATTTACCGAGCTGCTTCGAGGAGAGCCAAGGCGA
++
+<9;5<=;;::6;:;;1?88998<:>4:*91),4.5$7#,4'#$(,5.%)2
+@853_1359_2004
+CCAGGGAGCACAAATAGCGGCGTCCCAAAGTGCTCCTGAGGCGAGCTGCG
++
+?=<<A@=A=>>.?<?;71?A>=<><?2<8>=:749898&=<57&;:49&,
+@853_1360_1130
+TGCTTAGACTTTATTGCAGTCATAAATACCTATAATCCTTTGTGGTGACA
++
+>A@@<9?A:?>>?8@68?=>>9>/9<<44193577>;:;8?#,5.##4,)
+@853_1361_389
+ACAGCTGTATCACGAATGCCCGTCGTTAAGAACTGGATTAAGCCAAAGAT
++
+7=9=?>8?4>@7;:==A<?A=<A87=A<<>89789)>6:9)=647):49<
+@853_1366_1495
+AACCATAAGGCGCTAACCACAATCGGTGACACCGGCTCCAAGCTTAGCCA
++
+?;<9)6)&'&;+22'80:-%:&/3.<&)0(;):69;#)67;(8+&<-'%8
+@853_1367_802
+GTTGTTATAGAACAGTCAACCAGCACTGTCTAAGTGGATTTCCGTGGCGG
++
+=<?;$%&<<&(5>='(3><+648A+*:<@#46><#70<>#*.<3237=;%
+@853_1382_1227
+CTAGTTTTTCATTACTGGAGCGTCAACAAGTAACCAGACTCACAAGCTAG
++
+;::::899::898<:96:<99979<;99=93:/999:19667):611.<:
+@853_1383_1269
+GGGTGCTGCTGTCTCAACGGGCTGAGGGATAGCTGGTGGGAGCCCTTACC
++
+,@)':/)>6:(*'*9&';-(:),4((/,#31;7&/532*8,5:5*75,+1
+@853_1395_1324
+ACTTTCGCGGCCAAGGCCTCCTCCCTAGGGCCTTCCCGACCCGCTGCGGG
++
+)9-',&9*3)9',(1%6%7/4681)11&+:-1/4205()&3',,+$0#%%
+@853_1396_1014
+GGTCCCCTAGAGTGGGGCCTCGAACCTACAGATATTGAGTCGGGAGCCCG
++
+@<@:===?<;==98<:9>9:=:;@;:;=68::<:::;>:::><<863>9;
+@853_1412_1664
+TGGCGAATATGTCACGACCAACTGACAAGTTATTGTTACACTCCACTATG
++
+73A/A(<5,5585/@@4=,)383A,3,/6(3,5?98318,9@1/,9:11=
+@853_1413_877
+GACGGTCGTCCCTATTGTATTCGTCTCTCCGTGTCGTGACGTTGCCCGGT
++
+&)#*648#,9(.#3&&(#9.2,#/%3)#&555#).%3#19-4#4'3,#2+
+@853_1437_116
+AGCTGCGGCAGCCGAACACGGCACAAGGTTGGATAATCACCGGAAGTGGA
++
+$;,)42'#2(#&,,#%#2,2%,',42#$))#*428#%$2.%$%4%*#)%&
+@853_1437_1533
+CAGTATGGAGGTCCGATGCCGCTATTTATGTCGCATTAAGTTTAATTGCG
++
+>@<?:>>8=<:=>?=;>?=5<>:98<A9;6852*+4&$#$%4(#-4(*%#
+@853_1486_1272
+TCATGAGTGCGTACGTACAGAGCGCATACCTCGCACGCATTCGTAAAGGA
++
+93396@554737/373:5;5,:<=/;:1<1;5/<(/718:<7.<=,<1.7
+@853_1487_496
+TTTATTACGGGCGACGAAACGAATGGTATTTCCCTTGCGTTTTTCGCTTG
++
+<,'+856638:)0*.,+&.;7&1+;5-&1779<0:+3)/&+;1&,7()((
+@853_1488_605
+CCCGTAAGGAACGGGGATTAGAAGGATGGCAGGGGAGTGGAAACGAAGGG
++
+(%/)'(32+'))1*6776&2%)8&,7)71'2&$5+%))724&0)$('&('
+@853_1489_374
+CTCTTCAAACTGACAGCGCAATGGATGAGGCCACAAAAAGAAACTTTAAA
++
+>8786=:8:3:2;;;6(=99.3=5*/,%'(+#7121074(25$0,+%,27
+@853_1493_452
+CGCTCTCCCGATTCAGCAAAACAAACAAGGCTCCACCGTCCCGGGGCCGA
++
+'$),&/'53(%$((6'*'(&+%694&(2.1'&1(3&2'9/%)(&)()'(/
+@853_1493_1908
+CATGATTACGTTGACAACTTGGCCACCAAGGCGTGTCCTTTATACCACAA
++
+;@<;?>:::===;<>=;;==<?;==>?88<=<<9;<=?<9;;<7=:9<<;
+@853_1498_1797
+CCTCAGCGCCACCCAGCTTGGAAAACTAAACAAACAAATAAACTTTCACT
++
+&&&&&#&#######&$##&########$&$###&$$$###$$#$#$####
+@853_1499_1261
+ACTGTGCTGCTCGGGCATTGATTGTGAACCATTCCCGGTGTTAAATGAAA
++
+:;:=<=;<<5?>><>A9>;98<9<:<7;&7:9<:9<65/)<?&6)=7&2/
+@853_1509_820
+GCAACCTGACCGTTTACACAACGTGTGGAAAAGAGGTGGGAGAGGGTTGG
++
+18;:.49;5+6/<=879672373=.:;;47$'%06262%562%':5$5&:
+@853_1510_448
+ACAAACAACATCAGGTACCCCATAATCCTCCTGGCTGCTGCCCGGTGCGG
++
+6280647712'4:*,/72/(,2'28)43%0%)4'+$%''########$##
+@853_1511_561
+TTAGAACGCTTATGGGATCCGCTAGCTAACGCCGCCTGGCCAATAACTAT
++
+<?;8>>=<9:<599<<,<@;<5@=/<6>?;<;;<@85=<A>,,879296,
+@853_1511_1886
+GGATAGTAGGAACGAGATGCGGGGAACCCGTTTGGTGCTCGGCGGGTGTG
++
+:A(>/2;&>='7&>::(1678>>:1&(<::11,.<8,(),8>%8</):(<
+@853_1530_202
+GGTTCATGGCGGGACATGAGGTGCCATACCGCAACCCTCTAGGCTGATCG
++
+/9::8:7;58;0<%;;9=(3;8<1;73;16;1=57686/585:30;/<61
+@853_1530_1652
+TTTGCCGAATATATACGGCTGGGCAGGCACTAGCTGAAATGCCGGAATCT
++
+85;6%-0<#)75;)165:2597<'0;:;%(;3:#5;*;/2894$&5/5$+
+@853_1569_1617
+AAGCGAATACTGAACCAACACAGGTTAACTAGGAAGAAAGATAATTAGGC
++
+=A===>>;<><>A@@;AA9>8A>?=1>@9<7:8@@(>>@33573;)<&&:
+@853_1570_1472
+CACCGGGACTAAATTAGCTTCTCGTTCCAGGCGCATCGGACTCACGTTAT
++
+@A=?<A?@?A=9=AA=@=;>?>?<@=><=:<@9=,A?;<<7<=61;>9/?
+@853_1585_323
+GGTCACCCTTGCTAACAAACGTAACTCGCACCGATCCGAAATAAGTTGCG
++
+=;<<78<9;<:<:9<88::=<,:;;8/889<79:4;12:;,/88582.:9
+@853_1585_2023
+AATAAATATTACCATTTAAGAAGGAATACGAAAAGACGCCGGCGTCCACT
++
+:A=>5#:==<+=<==)=?<=&<=<>%<<?;)<=<=#>9<:$<;;:&?3<5
+@853_1603_500
+CAAGGAGATCCACACACCAAAACACATTTCCACTATGTTTGTGTCGCGGC
++
+=><:=4:;498<9<:9;8:=;>==7;;56;6>;75:9975574624<:1&
+@853_1603_1995
+CCAGGGAGATCCTAACGTGGAGCCGCGAATACTCCCAACCACCTATACAG
++
+:;;;>=<9A==;9:=;6::?:9@<@:8<<;:6><@<<9;@595:684279
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/bwa_wrapper_in6.fastqcssanger	Fri Sep 28 13:53:48 2012 -0400
@@ -0,0 +1,840 @@
+@853_7_53
+NNCNNNCGNTNAGTNGGNGGNGNGNNGGNNGNNNGGGGNGGGNGNGNGGN
++
+!!0!!!10!)!)0)!,-!##!%!%!!##!!'!!!%+&)!%$/!)!$!/(!
+@853_7_78
+NNGNNNAGNGNGTGNGGNCCNGNGNNCGNNCNNNGGGGNGGGNGNTNGGN
++
+!!#!!!5,!$!5&+!#8!)#!5!%!!3%!!'!!!$$8+!&)%!)!(!*#!
+@853_7_88
+NNTNNNGGNGNATGNCTNGGNGNCNNGTNNANNNGCTANCTGNCNGNTAN
++
+!!1!!!42!5!,25!24!77!4!3!!81!!,!!!5147!)/6!,!,!1&!
+@853_7_132
+NNGNNNGCNGNGAANGCNTANCNCNNTANNANNNGCCGNGAGNGNANGGN
++
+!!&!!!5#!)!)&+!2&!',!&!'!!1)!!1!!!4()$!/&,!'!'!0$!
+@853_7_141
+NNGNNNCTNCNCCGNGGNAANANANNAGNNGNNNGGGGNGAANGNGNGGN
++
+!!,!!!),!5!3)+!//!),!3!9!!&/!!+!!!**#)!.)(!(!(!43!
+@853_7_146
+NNCNNNCGNGNGCGNGANCCNGNCNNCGNNGNNNCTCCNGGTNCNTNGCN
++
+!!1!!!33!4!#15!7(!51!1!3!!.5!!5!!!/)/,!&-/!,!.!4,!
+@853_7_269
+NNCNNNGCNGNGCGNAGNACNGNCNNGCNNTNNNGGCANCCTNGNTNTGN
++
+!!3!!!/.!+!*4,!42!)8!2!3!!62!!0!!!84;)!)7.!5!/!&%!
+@853_7_321
+NNCNNNACNGNGAGNCANCCNANGNNGGNNGNNNATTGNCCCNGNANGGN
++
+!!$!!!&'!.!*##!6$!#1!+!#!!.+!!)!!!36(#!*5'!#!4!+(!
+@853_7_386
+NNGNNNTCNGNGCCNCCNTCNGNANNTCNNANNNGATANTCGNCNANGGN
++
+!!;!!!86!=!;9=!%5!58!<!2!!62!!&!!!&3:&!//8!*!7!5*!
+@853_7_405
+NNGNNNAANANAAGNTCNGTNANGNNTGNNTNNNCATGNCGANGNCNGGN
++
+!!=!!!;:!>!<8=!9<!:<!=!>!!;8!!;!!!;//1!&(&!/!'!*-!
+@853_7_411
+NNCNNNAANCNAAGNAGNCGNCNGNNGGNNGNNNCAGANTCGNGNANGCN
++
+!!$!!!-#!#!*#+!,&!2*!#!#!!%'!!)!!!'$)$!/-#!#!'!,+!
+@853_7_445
+NNGNNNTTNANGTTNATNTCNANCNNCTNNGNNNAAGANGGGNGNGNGGN
++
+!!&!!!0%!#!,&'!,'!$$!&!,!!&)!!'!!!..*&!#,7!1!.!10!
+@853_7_469
+NNCNNNCANTNTCTNTTNTTNANTNNAGNNCNNNGTTTNGTANGNTNTGN
++
+!!#!!!%%!$!))+!$,!*%!.!(!!.#!!#!!!#&##!##&!#!#!##!
+@853_33_1583
+CCCGCGCTCCCGATAATATAATCACCGAAACACGAAGACCAACAGGCCCA
++
+),+&#,)',$##2$),%2'+#$)2),#$(+#+##&*%(-%1%#(##$$2,
+@853_33_1649
+ACTTTCGGTCTACGAGCGCTTGCTACACCATAGTTACCAAACGCGCCCGG
++
+:286623:<88:;98367:997<87>/;:7/5<<69&<1;447999923<
+@853_34_1182
+GGGAACATTATACGGCTTTCGCCCCCTAGACCGCACTGTGTTGGGCCGTT
++
+>>>:9<<>><;58987;::9718859:2;75'3%(720&14%6(,51-&&
+@853_34_1358
+CTTATATTAATGCTCCACGTCCTTGACACGCCCATCTTTGCCGTGAAGGA
++
+A:8:<<<:<<5==2<6A;:8:>;9;;;==:8=?;:97:;65:5;:2><13
+@853_35_596
+GGCTCCTATTTTATTACGTGTCCTTCTCAAACTGACAGCGCAATGCTAAG
++
+>978>8=9;>;:2>;;85=3;::=;::7:8:68)<5;859>?<>:<6<58
+@853_35_669
+TTCTTATAAAACCGCTTACCCCCTAGGTCCGAACATCTTGCAGGGTCTTG
++
+,)&#<&38':&)-2/*4-'*+,5:0(3(+.+&,)9,&%1%*'(+.+-&&'
+@853_47_795
+CGGAAGGAGCGAATACTGAACCAACACAGGTTAACTAGGAAGAAAGTGGA
++
+>?@;;?>=A@A9:>;:>=<;=>::88<;=8=<:95>08=5.(364,)1,)
+@853_47_831
+TAAAATCTCGGATGGTTGCCTTGAACAAAAAGACAGCCCCGTCAAGGGAA
++
+5A,&5,))%(()&,13(.9<2++8,>99*(%184,=/&5+)6/)0.&)64
+@853_56_1228
+CTGCGAGTATCTGCTGAGTTCAGTCGGGGGGGGGACGGCTCGGCGCAGGG
++
+@;>?=?:<==:<??;>>?<<?:=:6621.-&%9&4&%:-&/(5)2(&5-(
+@853_56_1324
+ACCATGTATGGAAAAAAAGAGTAGAGGAGGGAAACAATGAAAAACGGACC
++
+/6+58//.61366638/)&988).5::15578427=88&0:>;59:(6;<
+@853_82_2023
+GTATTAGAATTAGGGAGCCTAAGAGACGCATAAGCCGCGTACAGAGCTAG
++
+9;97><<75?<26754=8=<:8?:;;>9;69;8589?17=4566595:57
+@853_83_197
+CCGTCTCCCGCGCCGCAGAGACACTACTTCCTCGCCGCGGTGCGCCGGGC
++
+/9;58179583997;5591<26;797=55:995$)&$'#-$(&&'(*(%&
+@853_112_119
+TCCCGGGACAACGGAATTAACAACCCCCGGGTGGAATCGGGTGGGAGGCG
++
+))&)994&,/1(+-+.-('(02)145,.&42,#&).,&(-0.%,',%:(0
+@853_112_253
+GTTACACAAGCCCTGTGATAACCAAGTCTGACGTGATCCCAGTGGAGGTA
++
+:47675926:45/<9974:+56:;64:;<81;89:<<;56855687<5/&
+@853_148_1347
+TAAGGCCCGTGCCGGTCCGTCCAATGATATTGGAGGAGTTCCGGAGCAAG
++
+A=;@>>?=@@A@?A@>@A@=9?9<A@;9>>>>>7;=8<=;8;?;18?62=
+@853_148_1509
+TGAATGTAAATTAAACGGGAGGAAAAATCTCCCCACAATTGAGGCCTTCC
++
+./<&1=35>,/3(6,,1<3*)7,53)69<&(A<8+(;91).8&+7(:&<7
+@853_157_314
+GATAGCAAAAAAAGGGGCCGAGCGCAAAAGCCGACCTGAGCACAGACGAA
++
+9;:5461242#)#*1####('$$$##'#%#'$$%###/$%($#'#$$#+#
+@853_157_582
+AGGAACCGCTAATTACCCCCCTTTTTGAGCTCATAGCGTAGCTTATATTG
++
+:9:=>=<:>7>@<:8><><;><:;=;:67<5;4;?4<0<.9=,<6:>,:,
+@853_158_402
+TCACAGACCCGAGGAAGCTTCGTATATTTGCCACTAAGGGCGTCGGGGGA
++
+5;&35,<55<8<6;<3646:618477::95<92=752071+2339-.#11
+@853_158_569
+GTGACTACATGAAGGTGATGAGCTGTCTTCGGTGGCCACCCTCCAATCCG
++
+69<7979/5>9:4;9:9+::880:8;37<49<:3:<='6:9=2558<.03
+@853_216_501
+CTTTTAATGGGTCCCTCTCTTACAAGGCTCTGTTAATTTTTCCTTTCGAA
++
+85<85,7=47;:627;<6<4<::445934*:5<2)$9&-$273#/#6-.*
+@853_216_648
+AACTAGTGAACTGCCAATGCTCGAAATATTCCTGGAAGCTGTCAGAAGAT
++
+=>>;==<;?>8<:?1??;;19;;>?>;?;>><<<:>=@=<:;;A6>>@;>
+@853_218_1907
+GAATGGCTTGACAAAGGGAGAAACGCATATCCTGTGATGTTATTTAAGAG
++
+5).5<9?642>9+;9<;;:28=4886909479&7,3;&#9+:,6'5,(&/
+@853_219_184
+CAGTAGTTGCATGAGTCATGAGGTTGGGTTGTTGGCAGCTGTTGTCGGCT
++
+'*)%%,,##3,1+,,#'&)#+#/-),%(&+$)%#%$&(&/#&(#%#'$%$
+@853_233_615
+GCCTTAAATCGATATAGTCGCGGGCCCCAACCGGGCCGAGTACACTGGGC
++
+;@),<%8)(&<(0)<&<)&53.*%/,5,6*/6;.)+>,%.,7,#,,*$%$
+@853_233_834
+TACCAACCCGACTTGACCAAAGATAACAAAAGTGGAGCGAAAGATCGGCA
++
+?=>AA=<>@A:=<=A><@==?=@3@@>=A>?>;:,<>:3=<>,:35>973
+@853_244_474
+CGGACAGAACGAAAACTCCTAACAACAGAGCTGAGCAAACCAATCCAGCC
++
+*$(5.+###%$$2*+'#$('/(#*$$$$0%'$$3',$(*#&'4(%$#/$$
+@853_244_781
+GAGGTCATTACTTTTTGATGCGATATGTCAGAAGTCACCAAACAATTGTA
++
+>:???<=A@<?@AA>>;5===<5?:?8::==.(8?/26;;77/:5>4(>3
+@853_255_146
+GGGAAGAGCCAGGGAGGACTGGGGCTGGAGCAAAAGAGGCGAGGGGGGCG
++
+#$##$%###&##'#&##$###&#&$######$####%%$$/$'%$'#$$#
+@853_255_403
+CCCAAAATATAATTAACAAGGAGATCCACACACCAAAACACATTTCCACT
++
+;88>7988<999==<9=;<6;9:9956=.40:<74<;=64,=:;95)4)%
+@853_256_428
+ACGAAGCGGTGTACCTGGCCCTACGCGGAAAGGGGGAAACCTTCCCAAAT
++
+@?8<A:A969=<:71?;;<5==>81><1<&??:264@>>/=<-819><()
+@853_256_834
+ACAATAACGTATATCACTTCGGCGCAGCTAGGTGTAAGAAAACAACAGCT
++
+4;3;>:<59A8@89:98>89<9;84985>.7<>3;9;9&56=84)/<9*1
+@853_266_697
+ACATGACAACCTTCCACCAAAAACCCGATGCGCATATATAAGTGGACTTG
++
+?=<;>@=><:<:;6<>?==;=?>=?;<;=2=>4<;;;9;:::6979;<::
+@853_266_1092
+GGCGCGGATTATTGTCTTAGCTTTGCTACCGTTATATGCGCTTGTCTTGT
++
+,318925,37;9,999<52622989/:7220#3$247,',*1'##,1,#5
+@853_279_1056
+TGGAGGGTACGATTAGAAGAGGAGGCGGTACAAATAGACAATTCCTCACT
++
+=<;<<=;><:>;=<<=>=:<<>=;<;=;<==8<87<7@8=<9<9;:1:3:
+@853_279_1330
+GGCCGATTCTCTGATGACAGTATTCATGTCGCTTGATAGTGGAGTTGCAT
++
+=<>@=<<:>=>9<<<<=A49;=::?=;<7A;;;3;;:;8:;;:2:58:&;
+@853_292_158
+AACTTTTCTGGCATTTGAGCGCGTTTTGGAACTGACGAACAGATGCTCCT
++
+===9<<;<=<<>:<:=<>::7=9<=:;9:>;;98=58>;>4=@;:,;=1=
+@853_292_700
+GAAACAAGGTCCCCATACTAGCTTCCAGCGAAGTTAATGGGGACCAGCCG
++
+6;8489::=9;?9859?7=7484=8<8:83;<3>1:7=64=,8;/3:5=/
+@853_365_890
+AGAAGTCCGGGCGTAGTGTATCCGAGGGGCAAAAACTCTAACAACGGACT
++
+=9?=>7:9;A=9==??:<8?<=9@6<:>>8<?=>:=6:=<?8;<398:8)
+@853_365_1447
+CTGAGATCGTCAAAAGAGCTATGCGGAGTGATTCCACCAATTAGTAAAGA
++
+:8?6=<<;<>=8=;>>:::;5:89:5:;=</7:7<4787;099);557*;
+@853_368_1718
+CTCCCCTCTCAGCTTGATTCCAAACGCCGGGATCTAAGGGTAATGTTCCG
++
+;;A>A>?A;@@<><9A;6:?A:=1><<A@6=5515A<>8397:@1<6<3:
+@853_369_74
+GGGTTCAAGCATGGGAAGTGGACCACAGCTCCCGACGGTCCACACCATCA
++
+=9756::884:54:791:47358965758589965&:94,&969;(5143
+@853_375_367
+GTTTTTTGGCGCGAGGTTTGCGCAGAAGGGCAAATTCCGGCAGCGTCGCG
++
+5&')&(9<1,=?>:+,)6)&7,&(05/)1,',(0'&),&(6/7,,5,,44
+@853_375_856
+GGGATTGGGGGTGATATACGATGCGATACTCGAGTTTTTCCCCCCATTAA
++
+;?>8@;>:?:A7:;=@=9==<?=A@<=8A:749;:><<>8;7>=>6<935
+@853_381_1334
+TGGGTATTAAGACACCTTGAGCCTTGGTGGTGTTATGTGGTATGATGGGG
++
+@=>@4)%>?=;,@?:86>?<=%>?=;';7%.&%&,#%'2#&%,+2&#-%*
+@853_381_1648
+AGAAACGATCACAAATAACCCAAGTCTCGCCAAGAGAGCTTGATCCGAGA
++
+8:9:;<;::::;65&:178(:8:517:35$3385)958.$<578%7:7.)
+@853_383_962
+CAGAGATTCAACCTCCCCAGCCCCACAACATACCATTGCAATAATTGGCC
++
+@??9;>:=<==:;<A>2<:=A;?5?<==7:>99(:?>@)?956)8<3;*5
+@853_383_1666
+AACCACTGAGTACGTAGGCGGTGCAACCGAACCCCGAGTATTACCTACTG
++
+18$+&,#./,8#8('./99#4(58);.22,;,2,%6,%)(,.,*957)('
+@853_389_1983
+TGGAGCTACACCATCCCCTTAGGAGGGGGAAAACGTGGGGTGACGTGGCG
++
+715;6741498/6459/6448/6573'569<98845/6:9$),4%.560(
+@853_390_660
+CCCTTATAAAGCTCGTAACCGTCAAGTGATCAAAGAAATCAAAAACTCTT
++
+>?<::>59A7:=:<?<4::897>A@:48;<<8;;5><=67=,><=7(546
+@853_392_1916
+GATGCATATCCTGCAAAGCACCAAGGATGGAAATTTGCGCTAAATAAGCC
++
+@;@A?>A;?@A>@@<=9A>??=<;A@9>A?=:;?=>;?<<?;<962&6):
+@853_393_183
+TAACCACTGAAGACTGTATAGCGTAGTTTTTCATTACTGGAGCGTCAACA
++
+;;6;<7;::=<;<;5<<6<6>6:>9>>;@==99>1<?;//<75.<3=98:
+@853_397_1746
+CTCGTCTGATTGCAGGGATGTATGACATATCTGCAAGGAAGGAATACGAC
++
+?7897:;89;8;088<9/285<0:?79/87;5)777:1<>/7.4.2+,5,
+@853_398_593
+GACCCGTGGGCTCCACTGGTCAACGCCGTCCTATATGGCGGACTAGTCCT
++
+(,1&31,+//,&1?0,)(>91),,7(/0(1(3=/1>/)&83:5336:3-3
+@853_423_1430
+CGGAGAACCCACCCGAGAGACATAGGGGCGAGATTCACCTGCTTTTTAGG
++
+>>5:<8<A<=:<=@<=5?:/=:8;7:=9<<87:<897:7891.=%;8/7;
+@853_424_115
+TGTTGACTAGCCGCAAGCTCCCTGGACAGAGGCAGTCTAAGCGGTCCGTT
++
+;<<8<<>=9<=?:8:?:?8:A>;3;<=<8;<9?69>99;:;;77;:9/,;
+@853_439_1980
+TGGAGCGATTTAGACCGTATTTTAGTCTCCGCCGATAATAAGAGCAATCT
++
+952;8:98452>4=9;:0=3)6/76-666=777+<4::&86.;'7;:+5'
+@853_440_379
+AGATCCCTGAAGGGTAGTCGTCCGGGTTACTGCTACGTTTTTCACTAGAG
++
+699<68<=>=;<;;=9:?9=<<<=;9::<,533=889<;19;/5)9:/7/
+@853_443_704
+CTTCATGTGTCTCACCGTCCTGGGCAAAAAAGTGATATACTACAGGAACA
++
+@<AA>>AA>=<?=?=@A@?=;A8>;>@9<>>>:;=>;>:::?,;:<>/:7
+@853_443_1353
+GACGGAGGAGGGTAGTGCGGGGGGCGGGCGTGGGGCTTGAGAACGGCTCA
++
+95:19@9979:<4,82>02:3;5.46:65:5<95<7:;7;:>9*;:<:82
+@853_458_262
+AAGTCATCTTTCCGGGGAACCCCCCGGACCTTCCTTCTCCCAACCAAAAA
++
+>>;>=;<4><=>5;=;>2=>:>1;<><'::8>(=:?5%<=9;29<<=-0<
+@853_458_615
+CGGAATGGTAATCCGCGGTATCTGATCGGCGTACTGGATCAGTTCCAGCT
++
+>=<=;<>=<<:<<>??;=9;:?:<=:<<>=::<:9:>89==<4<<88=58
+@853_489_665
+ACGAGGAGATTAAAAAAAATGGGGTTAGATTAGATAAGATGAGAGGAGAG
++
+=>?><@=A<@@<?>>=:=:=;24&&)00+&$(4:%%'(4-#+16#-'1.$
+@853_489_1193
+AGTAACTTCAGCATACGTCCCGGGTTGGGCGGACTCGCGAGATGCTTCTC
++
+>A==A><>@>==<>??<<>=@==?>=>=?<A>:=8?=6=?>:=@1;:,81
+@853_557_600
+ACACGCCGCAAGTCACAACGAGAAGGCTAGGGACAAAAGACGGAGCAAAG
++
+7-0'%()1&'&/65'1'/+,.*&&*17165:+0#-+'.&+''$-,$-&'#
+@853_557_1176
+CGGGCTCCCCACACCCACGATTGAGATGCGATGTTCATGTTCGTCGAGTA
++
+A@=????>@=>?=>@>=?9=<?=7?>=<>>?=>>;7;>9=:@;<=:A=;7
+@853_558_962
+AGGAGTAAACGATAGGGCGAGGTCGGCAGGTTAGGGCCCCGAGGGGGGAG
++
+>?>==>>>=?><;>=?=@>;<<277*.6<%'979$6896#&,:8090().
+@853_558_1569
+TGGGGGGAATGCGTAAAGGAGGACCATGCCTCTGAGAAACACGCGCGAGA
++
+&&(?(?(8><;;;;<=;<7<;;8<:9;<88=<:<=::?8,6658/:,181
+@853_563_1263
+CTCGTACTGCGTAATATACAACCCCACGTCCGTTTGGCTTAACAGGAGCT
++
+@A>=?A@><?=A<==@A==?>>=;==>:1<<:?=<=<;=:?=<&:3<3):
+@853_563_1776
+GGTCCTGCGGGCGGTTCCCAATTTCATCTGCCCGAACATAATAGGTAACC
++
+@=?=A>A@A>A?>@>>A@>A>?>1@>>>5@?@@8>?@&8><>97(:9:5)
+@853_584_1986
+ATGCCACCGCCTTACTATCTTTTTTGCTGACATCACGCCGTCTCTTGGTG
++
+,#$)*)(($3,))$&#,(&#*))&$##&#(%+&'+$,,$2$&(#&#+,#$
+@853_585_542
+AATAGTAAACGGCAAGAGCGACATTACCTGAATCCTGAAGGGTGGGAGGT
++
+:8?=<A><<A:=>>>?9<>>=::<>?6:>==<;:><::3:=<98?>27<:
+@853_585_1153
+AAGACCAACGTAAATTATCCATTCGTACGATGCCCTGGGCATTGCATTCC
++
+<>689<?9>59781>9956245:44?6,16=466;77615206+=12$#,
+@853_611_981
+GCACGGCAAGCGGTACGGGATACGTGAGGCGCGGTAAGCAAACCCGATCC
++
+;=9===@::A><;<6><=;:@8;;==8<?:<<==<<3=<&>55=9;38=;
+@853_611_1451
+GAGAGCGACATTACCTGAATCCTGAAGGGTGGGAGGTAGCCAGATCTATG
++
+728<<8:1-.:;3/:77634/887;683)<596&75:;,188:2:37<,/
+@853_626_841
+GATCCCGGCTGACTTAATAAAAATGTGGCCGTCCTAGAACGGCGGGTGGG
++
+AA@?@A@?@><A>@>AA>><=A=?;<=>;><=<7=>6@6?=>:58(,4),
+@853_626_1431
+ATGTAGGTCCCTGACGGCCCCACGGAGGAACCTTAGCTAGGCCAACAGAA
++
+>5<:5897:<;4==:;7>;9;<979>89?<7;;:<9:6<49;8644.1+$
+@853_628_1041
+CTATCGCTGATTTCACAGGAATCGGTCTTATAAGTTTGACCCCTTTTTTT
++
+<9)9<7839<:>/<<;>3'A9<36=<9$#9<8((<=8'&;97'7>;#2(8
+@853_628_1976
+AGTCACCAAACAATTGTAAACAATTGTGTATCTAGACCGATGGAGGGTGG
++
+8@>9<=@<=@:A:;>:<98=9?7:;8;;6:=?<-<;?<77;A9/:8>9,:
+@853_630_585
+GGCTGGACTATGCCGATGCGCGGGCACGGAGGGATCCGGGACCGGGAGGA
++
+&#$%#)%&#%#$$&(.##$##)-$&%%##&&.#&#$&-$#&'+'#$,,$&
+@853_630_1363
+TTTCATGAGTTAGACGGGCGACTTTGTGCCTTATGAACAATCTGCTGGTG
++
+A?AAA@AAAAA9AAA>AA>A@5??@8;>@8/:8A7)3>?@76<;:,<73,
+@853_648_1618
+TTGATCCTATGCGGACGATTCCCGCGCTTCTGCAGTTGAGTTTTTTAAAA
++
+1/(,/3<)+7%'/,%'&1)'09';/5.)%,)1&*111&+&5&0$4%$581
+@853_649_292
+GTAAGGTTGGGAGTTTCGAATATCACAACACCGATCCAAATGCATAGCCG
++
+@<=;>;>><>>@=;<;A>8;;?<>>=>;@;9?>?7>?:=:7=7<:/@676
+@853_669_616
+CAAAAGTGATATACTACAGGAACAGTTGACCACCTGCATGCATGTTCGGC
++
+AA<>=>>@<@>A@@>@@?A>>?<9<@=?=A>9@<A>:?A:>;=8==8>;3
+@853_669_1548
+TCGGGGACCGCCGCGCTCTGGCAGAGAGCTCCAGGGCGGGTGCCGGCAGG
++
+8<977;>:=:;=:9><:9<;795<65>2>;;99=9/<4<8113/78,((&
+@853_678_1204
+CTTAAGAGAAAACCTGCTAGCAAACAAAAATAGGGGGGGAACAGAACGAG
++
+737,88957/39486691$92<:77<:1060:9),4&/)),)(').4+,'
+@853_678_1908
+GTCCGCTGCTATTAGAACCTCCAGATGGTACACCTGCGTATCGCCTCGAA
++
+=;@7;=754;;::49@@,:9>>?2=.;5087><2;,924968463(;3)<
+@853_718_1061
+TGTCGAATATGCATTAAATAAGACTTGGCCGACTTGAAAAGTGTTGGCTT
++
+>A><@?@>@=>>;=<>@===<?=;>@A<=9:>;>=6==8<89:5>8>>;<
+@853_719_183
+TAGAGAGCACTCCAGGGGAAGGGCCCAGAATCAAATAACAACTAATAGAA
++
+99387)&%.,./'%682&.53/$)*65-440/#%$1$##.&$##2#,%$,
+@853_775_1932
+GTTTACGCGTCCCATTTAGCTTCGCCTATTTTCCCGTGGAGTGTCACCCA
++
+((>3,,(/7&(A,3:5('4&<<?3;/,;8=()7@=:(3556(9:>/1317
+@853_776_924
+GTGGGGTTAAATAGTAGAAGCGCGGACAGGTCCACGTGGAGCGCGAAGAA
++
+88;9855?888?<.;=:54875'67+1#9661#474.5374&#1:2*%88
+@853_815_1179
+GCGGACTAGAGACGTCAACTAGGAGTAGCCGAGTTCAAAAGGGCAAAGGA
++
+<'#37,/*;1;7,;45-738,(/3,+.%21:/&93('(+7#*(,8(*(&/
+@853_816_193
+GGGAGTTTAAGGCAACGTATTGGTCGCCTTATGGTAATGGTACGTATAAT
++
+?=<;=<7>:@=:<>9<;;;>>;8;8<:6>;9>85;=5:<899,7;3174>
+@853_827_2017
+CGCTAACGTTTAAGAGGATCCTCGAACTGTGTGCGCGTGCGATTCGAAAT
++
+<?8::>;8;=:?8<=4997;8;8::;<;::<0845;5397<8<;9<=6++
+@853_828_1138
+GCACTATCGTGTGGCCCGATGTCCGGTCCTCCTCTCGGTTTTGGACCTGT
++
+&+&&)')$#,&,#&&')&%&'/&$$'#####&##%$$###&&##&$$###
+@853_843_799
+CTACACCTGCGTATCGCCTCGAAAATGCTGTCACCTTAAGCACGTTTAGG
++
+@>>=A:AA=A9A>@4:=>:8:2?:@23;>;;9=1<=;=933'58>;9>:6
+@853_843_1357
+GTTTGCTAGAGTCGTATGTAGTCGTCGTTTCACGTGACCGGTCTACACCC
++
+>:AA8=?:??:?@>@?><>8<;<:>31=>:8(=8<74=,9;?5;724>48
+@853_844_231
+GGGGGACAGGTGGAACTGGTAGACGGTACAAGGGAGAGCGCAGGGGATCA
++
+4289*5)*(/(/+;=$/806&&*76&,.19&4754&2/9/92>3;)11:,
+@853_844_634
+TCGAAAGCTCAACATCATCCGGCAGGGCGTAAAACTGGTCGCCCATTGAA
++
+>A;887A=2@9>;.;<67,;?::2:<;9#?<97/7<944:;):&*>90,6
+@853_877_1974
+GCGTCCGCAAGGCGCGGAGCCTGAGAAAATTAGCCCGCGAGAATGACTAT
++
+76187559,719324834789;;285501;<<65:<<:9;;99=<830+:
+@853_878_1093
+CGACTTTGTGCCATATGAACAATCTGCAGGTGTCCACAGTGCAGGCCGGA
++
+15<8=89=977)&;9</2=;9,&<=:/)<9,&$3<5*&.79&/<93))78
+@853_887_1933
+TTCACACCCTCTGTCCCCACATCGCAAGTGTCGTCGGACGGCTTGGCGCC
++
+<4?>>@7<<<>:<9;==A?><<=<@?;=9:<8>:=<;=:4=#3))&,%))
+@853_888_1016
+TGAAGACCGGGGGTCCTATGATCAACCCAACCATGAATTGTCACAGACCG
++
+&.+/)(-#'('&5#405$2220&,/03$0+)9$(#)4%%&&-,#&#),'#
+@853_943_830
+AACCTACTATGCTCATGCTGGAGAAGAAAAACACCGGTGCCATCAAACCA
++
+(>,5+''#1):,#>#10#%2:%$3&(4#.#..#*39(#':6,$'%))##4
+@853_944_156
+GAACAAGGTCCCCATACTAGCTTCCAGCGAAGTTAATGGGGACCAGCCGT
++
+=;=?8;<;:><===8@<:>8>:<?;?95:??=;:??>4;<:;769:=;25
+@853_946_129
+GGCGCAAGGTCTCGTGCTGAGCCCGCGCTTGCCGTTACGCTGCGTGGCGT
++
+8:<;:,'$,7,./7=,&,<:0$.88(/294'$%::4.%8).)(4,%$(&'
+@853_946_1345
+TGGACCCGAATCCAAGCAGCCTGCGAACAAGGTAGGCGCCTGGTTAGCCA
++
+?A<:<<A:=<:@6<><@:=>1@=<==<4:>:=<:>985::685;:2689;
+@853_967_1892
+TCGGGCAGATGGCGTCAATATCCTAATCCCGCGGAGCGGGCAGTACGGAT
++
+:>;<<<@==;<<<>;2-#8>87'9><*%=@271=A6//=;)7,;=1).:5
+@853_968_485
+GAATGGAGGCGTGCATTTGAAAACGAGGCCAGGAAACTTCAGTACAGGAA
++
+=<:@<;:>@AA;>A9?8===<=>9<4;=7:2==9;94?@>.,;&;,=<&0
+@853_968_835
+ACTTTAAGTGCCCACAACGTGATTCGGTGGGGCGGTCTACATATTTGCTA
++
+?>@,@<491;:6>3=@<919==@:9>:>4<=:=,=<<9,9965#89.,7:
+@853_968_1657
+CTGAGTTCATTTATATCAATAACCGGTCCGCCGCAATCGATCGCCTAGGG
++
+@=@=<?><:>?>8<<5>9<=3>;>=:==A?<A2?<:=<6<6:1@98<56=
+@853_985_616
+TGTTGTGATACCATACCTTACCACCCTAAGTGACGCGATATCAACCCACC
++
+=@?A8>>@=>4@@@868@>;:=865;?=<;3=6&1#)#,&,&1#$$()$)
+@853_985_1608
+CCTCGAGTAAGGAAGAGAGAAGGGTACGATTATAATCCTCCCAAAACGAG
++
+@798;<9::<9;<:=?9>8;=9:97?68?=;1<:58:3/97%2)%-)#&#
+@853_991_1890
+AGGGGGGCAAGTTCAGGTTAATATATAAGTTTAGCCCAAAAATTACCTTC
++
+>,>)&,(->>.32(<@>1&=)/:/)>/&+((>,;)3;&1>=;,%63=7:9
+@853_992_1006
+CTGAATCAATGAGCCCACCACCACCCAAATGCTACCTACAGCAGACAGAG
++
+###(#$#$0###1(###+,'##*##%#%##&##0####$&'#*%*'%#+#
+@853_992_1044
+ACAGAGGCCCACCTGCTCACTCGGACAGCCGCCCACGATGAGCACTGCTC
++
+:70.7143#46<257:>/,488938=96958:/75;29)715689/8(&+
+@853_993_143
+CGGGGCTCCAAGCTCCCCATCGAGAGACTGGGGTCCGTACACCAGACTCG
++
+;759<65;<>97<::==@/8;6;6<:;85==1::;;:97<,9=937:79:
+@853_996_488
+GCGTACCTGAACTTGGCCATTAAGAGCAGAGCCACCAGTGTCGCGGGGGC
++
+&-'*/*/8)$2(,.22&10&,))0/+,$38'(531,)2)'((%'6'(-1.
+@853_996_1656
+TGAACCAATAGTGTCCCGAACACATTGACAGCTCCCAGAGATACTTTCGA
++
+?=:@@>::<;<<?<@<>>;@A7>@<;3<=9<=8:=@99>::.>7<;8<9=
+@853_997_740
+GTTATCGGGGGTTTTCGCAACATAGCTTTGGTAAGCATTTCTGCACCCCT
++
+(=('(,(,+<=3?<;::97<;::9<;8:4;<;9::=38:;?=;1<99087
+@853_1026_2018
+GGAGCTATTGCTCAGAGGCCATGTGGTGTCCGTTGGCGTTTGTGCTGGTG
++
+9<#64>;#659;#%61;'11&<+7#9=-3(3:/3342&)361&&(34#%,
+@853_1027_1303
+AAATAACTTCAAATGAAATCCACAGTATCCCAAGAGAATCTCGTATTAAC
++
+@><<<9A>>9=A:=?:>;<</;=53::=7;6=9783;3=35:5;):83/)
+@853_1055_941
+TCTTGAGGTTGCGTAATTCACGGTGAAATAAGGAATAGTATCGTATCGAA
++
+5&1)>3175@6//;@:3/)=5&$#&&&&&&&%&$'&&%&)&&$&&&&/&)
+@853_1056_37
+CAGAAGATCTACTCGAAGGGGTTTGTTTACAGCATAAATAAGTTTGGTTG
++
+:;<75:;?:A9<9585::-9<<=978=9632125145)559:&59-,%&#
+@853_1075_559
+TGAGCGCCACAGAGGGGAGTGAAACCTCGCTTCTGTATATTAGGGTAGGG
++
+#&5*&&(1&%&)2$,=(5+;9(0$2:&)%%$)1#:(#)2*,(',)#(,,#
+@853_1076_58
+TCACATTGTTATAGAACAGTCAACCAGCACTGTATAAGCGGATCTCCGTG
++
+=>9:9:>;%;1=9(9:9;5;5<;8;<9937:7:.869=3817<*6177..
+@853_1091_1124
+GGAAAGTCAAAGGAGAGAATCGGCCCTGGAGGTGGCGTAAGGCGGTGTCC
++
+=?>@A??>@<<>9;9@>5;<A;??>A?:<>?;5:9;674;<518:5$=09
+@853_1092_230
+TGCCCCGAATCCAAAACCCCATGCGGTCAGACCCATTCGGTGTCGAACCT
++
+>;>9<<>::=9=8999=7>>:8<<6::6997548=<99-9;156579;4-
+@853_1094_215
+GCCTTTCTCCCTCTCCTCTGGTTTCGCCTTGGAACAAGCGAAGAACAGGC
++
+4)&/-,1&$77/,.114('(1+)%'*0#,3$$#,#'&(#$$)#,$%3,#+
+@853_1094_1720
+GTTTCTACCCGCACAGTTCCTGCACCTCGTAATTATATTTGTCGGGCATT
++
+78::=<:364<36:9<<:<7=25474<3918497):51913355.=-875
+@853_1138_1582
+GCGTTCCCACTGATTCCAACAACACCAACGCTATGACCCATTGCTCCTGA
++
+?=@@@?=<9<@>;?@=?:<><;7<=@=7==8=9=@/><6>99:5?;8<68
+@853_1139_914
+GAACTAAAGCCAACGCGGCAAACCTTGTGCAGCCACCGCAAAACCACACC
++
+)4#%&+2%$,/$##*000$&.2(,'',,#'&#%%)%%#+,'-&$,$*&)*
+@853_1144_824
+ACCGCAACATGCTGAATATGACCTAGCAAACTACGAACAATCTGAACCAC
++
+'8'..1/#3)()&$%'/(&&#((('$1(.#+))',$)%(#(+),,,#$.)
+@853_1145_305
+GGAGATCGGGGAGAATTTTATAACGTAACATAGAAAACAACCAGATTATG
++
+A>=>A:A<=?<A<A@=<=9?<A@<<<>>=<9?:>=:>7=:>:?8?79;55
+@853_1148_420
+CTGCGCTAGGTGACATGCACGGACATATAGGTCGCCTGGCCCGAGGGTCA
++
+?>>@=@A<=?@?:?>@A==@>@;<>@3<>><>;9?==;8=:,:1<;5:<=
+@853_1148_1437
+TAGCGGGGCGTAAGAAAGTAGAGTTGCTGGAAGATACGGGAAAAGAAGAG
++
+59)&&;')&&4,1)&/;&(-)1&/(6/,0,1<<,:<5(748':;9==/7<
+@853_1149_239
+TCCACTCGGCATCTCTTGCGACCGCTTGAGGGGTCTAGAAAAGCCCTGGG
++
+$$+,#2#',+*%0'',#$*4(8#'0$5&#+0/4+*0+5%&(2)#&3/('+
+@853_1149_1929
+CCTGCGCACCAACCCGACTTGACCAAAGATAACAAAAGTGGAGCGAAAGA
++
+<=9>:;9;@A?9;AA::@<8><>>=<<9;2>=98>;>338)8832;>:15
+@853_1231_1371
+CGCAACGTTCGTTACCCCTGTGTTTATACCTGATTTGAATTTAATCGAGG
++
+#:2+%%-,#,-/''''#&**+.#%&,*)#*#1$$&+%$%'%&3$'/$'(/
+@853_1231_1635
+CTTTTATTAATTCAGTCAAGATTTTGCATGAAGGACCAGATTGACATGCG
++
+<>=;<;?;9:9@56<=;7699<47:76,:89:51;860456<'511:)73
+@853_1232_516
+TGATAGCAGGGGAACTGTAGCAATTAGGTGCATAATGCTATTCTCTAATA
++
+=@:<=@>49:;>6:=:>;:;6A9:::><;:4=7699=87:7=869&5=&&
+@853_1232_940
+GTTTTCCTGTGCCCGAACTCTTGGGGATTATTCGCCCCGAACGGTTCGTA
++
+//&)3=65://7&/,1@15,)),33=1,<),,3(3?))//,),)6,39)'
+@853_1236_169
+GCCTCCAGCTTATATACTCGAGGAGGGATATATTGAACATAGGCTGGTTG
++
+8>9<:6<,.&99864<;>2);=52,:<59/<67<*;<:&+9:6&2<<<:)
+@853_1237_10
+TAGCATGCAGACGAGACGCTCCATTTACGGTCGAGAAGTTTAGGTAAGTT
++
+6/<779>86=-4886:>:37==:1;729=2</===6:;,6/;66)((&14
+@853_1242_1158
+GCCTTTCGAAGAGGGCCAGCGTCTACCAGACTAGCTTCCCTAGGAACAGC
++
+=@<=;@@<>==A>>@>=>@=A:>@>???=&;)19(,,&+%+&(&3'3&,&
+@853_1243_871
+TCTGAGACGGCAAGAGGTGAATCACAGATGGGCGTAAACCATTAACTTGC
++
+1&?()&,1>>,(=&:88>/>7=1:77=118:75/988:57283/&))'**
+@853_1265_969
+AGACTCGGACGGCCGAGGTTACCCCCTTGTTCCCCGGGCGAGTCTACCCC
++
+&82,4,54'),%&)'0('.9.$9',;1(#%88)*#8&(,%19,#,871*#
+@853_1266_828
+GATGGAGGTGACCCTAGTGCAGTCTGAACCAATAGTGTCCCGAACACATT
++
+:@@@A38:=95@A=>6:A=?:>=5=;>=;?6>;<=3;>8:;:;:>6=88;
+@853_1267_170
+GGAGTGGAGGTGGTCGCCCACCAAAAGGGCCAATTCCGTCGCCATCGCCT
++
+&%%#+,4,##,,8.,%/#'*#72&-,.#*2123-&,4$2#,2(.(,,',#
+@853_1277_1774
+TCCCTTGACAACACGAATATAGCCAATTCTGCACTATCCTAAACATCACC
++
+AA?=??>;<>>@;>A@>:?<,3%&1,,(89'92+4&0)-5+&1,/15%/,
+@853_1278_1160
+GTAAATCCGACCCCTAAAGAGCCAAGAACCCTAACCAAGGGTCAAAAGAA
++
+;AA==A?:A>?A<?;AA=;79?8><7@<:::8<=97=@9<953=A<8,>6
+@853_1280_287
+GATCGTTCGCGAGCATCTGGCTTTCATGTATCTGAGGCAGCGCAGAGTGC
++
+>?A??>A>@A?>@><>?><@>@?<@=@8@;@:>;<>/=6<8193@86,/)
+@853_1280_1640
+GTTTCACCCCCGTCGATACATACTAAGACCTAACGTGCCCGAACAAAACG
++
+8>*2#8+#%#3/##&=:#$.=2#+1<6&(%@1#($>)#'#8(&$+=&&$'
+@853_1280_1971
+ATTTCCAAAGGTTCCTTGAGGAGAAGTGTAAACATTCTCAAGTCCACCAA
++
+))(,8.)1)+/&',)*76&85:4'5$$'#2/&(/#.%#&4.'***-+'37
+@853_1281_1171
+TGGGACACGGCAGTCCATACAGTAATAGAGTGCGACGGATACGTTGCTTC
++
+:@<;?<8858@:5>>;?=45;;=:47:4<7>812<985811.27:,091,
+@853_1289_1050
+GCTACATGAGTTCATTTATATCAATAACCGGTCCGCCGCAATCAGTTAAA
++
+=75>>;:8787:=6?:;47<:576:9:;3;6=5:<;:'47263+($&&*%
+@853_1290_58
+AGACACAGAAGAAAGACATCATCGACAGGTCCATCGTCGTATGCCAGAGC
++
+:846:=:>;;>:9:=8=<=@:;;=;,:9?@;9;><3?=6<1=6=98:/:;
+@853_1297_514
+CTAAGTGTGTAACAACCACCCAACACGGCACGTCAAGATGCGCCGATACG
++
+8@8;9>795A<8=9:A?7;@;??;5:><886<;:=6:9:8.=@=:4:9==
+@853_1297_1934
+TAGGGCTCACGGACTCCATCGCTACATCCCTCGGGGTGAAAGAAAACAAA
++
+4*%#*,9)-*1751,197()*3-,#94&(-),$##.(#1/7%+#,0&,'0
+@853_1311_394
+GGAATTGCCGTCGCGCGCTAGTTGGTTGGGCGTGCATGTTTTGGGTGGGT
++
+@=<><<?@?A<>?A>0(6)</.;<>:2<><07:<5(0;(4&&0;&.+1%/
+@853_1312_213
+GATTCGGACAGAGGGCGAGGCTAGAAGGGCGGAGGGGAGCGGAGGCGAGG
++
+?>:<?=?@=@=>;<<<?<=>?9?=:@<;<6<><61:4,1(2.)2&&,+2&
+@853_1321_1372
+TGGACTTCAGTGGCAAGGGCGTCTAAAAATTAAAAGCTACCGTCAAACGC
++
+@A,>@(5);A&/6>>;??;7>9?19619>1=/<89<3;81>/=3>7/?/9
+@853_1322_846
+AAGAGAACCCTATGACACCTAAAGTAAACTTCAATAATGTTGTGATTAAT
++
+?==:>A@8A8<A?>;:>>7<7<865:>:8=:<:-85:;:<85;</755;<
+@853_1359_649
+GACACCCGCTCGAATCCATACACGACATAAGGGGCCTCCTGTGGAAAGCA
++
+7>=41=&7/-)&+,8)/:):7,:<7)/0<:&&;(4(&(86'953.3>'./
+@853_1359_2004
+GTTGAATGGAGCCTAGCCACGCTCAATGCAAACAATCGTTCCCACTGGTT
++
+<=<<=<<>A?><<=<;=?;;>=?>>9==@<>;>;<7<;>8;<83495&<5
+@853_1360_1130
+CAGCTCCATAGCCAATCTATTGCTCACGCAGGTCCGCGCCTACGACGTAT
++
+A@AA><:@8>@=AA@>8@A<?<@?@;=<A;A9=?A;<?>:>1>68<6?<;
+@853_1361_389
+GTTCACAATCTCTCGAACACCCGCATTCCCCCGGTCTCAATGCGTATGCG
++
+=AA>:<8=@@>;>9?=<<487?:=>>A=<?;>;5<8>8/::8;/A/>949
+@853_1366_1495
+CTTGAAACGGTACCAAAACCAAAGCGCAACCCTGTCCCGTAAATTTATAT
++
+AA;>9>>:<<::?8;>7:>597<>/@6=:8>9=A/:;>:;/9==92/819
+@853_1367_802
+GTAGCTTGACTGGGACCGAAAGTAACACTGGTAGCACCGTTGTGCACACC
++
+;:?>=>>=?>><;=9?@@=;>?6<<?@7=<?;;:>?99;<?(4<=;:;/<
+@853_1382_1227
+CTTGTCCTCTATCATACCAATCTAACTCGACCTTTAGTCTCCTCTCCTCT
++
+<;:99:98::8:#5:;:(7:6<#8<6:%0<89,5944,8:9:4/020*),
+@853_1383_1269
+CTATTGACCAACACAGTTCAAGCCAATTGAAATTAGACTCCCCAGGCGTT
++
+/))3(<(152,3),<8:2)37;.6/&7$)1/,$0'%4$3&74).0&0%13
+@853_1395_1324
+TAAGGAACCGCTCAACACTTATGGACTCGATCGGCCGCCGTGGTTGAGCC
++
+4*,19./*)96*83;4,/1,)'27)2082,,'*6(&)&*%(*3422-+1+
+@853_1396_1014
+TACAAAATGCGTCTGCCGAGGTCGTGGCGGCATGGCGCGTGGGGACCTGA
++
+;A5:;:>5;AA>6:><8:<A=<6>:?:9<=<27<<=3<<9=><;><,:<9
+@853_1412_1664
+GATCTGGACAGGAATTGAACACAACCCGAGGTCTAATGATTCGTCGTATA
++
+545)567,5,/*$$,4/$',+)%*,31#)&-1$.'13$&,1&0).1&&&(
+@853_1413_877
+AGGTCAGTTTCCAAGGTGGGGGTTGGCATTACGTACCATTCGATTAGATT
++
+?A?<<;A><?;A=<;;>856/>#%###&###%####&&###$$$&#%#$$
+@853_1437_116
+CCCAAACCAGGCTCGTCCCCTTTAAGATAGTCTCGCCCCCCCTCAACTTG
++
+6>>9;<@7=::=:>=544=54#'8&5-2)#(*)4,&%+#',2-&+&0-*2
+@853_1437_1533
+GGCGCATACCTCGCACGCATTCGTAAAGGATTGAGTGAGGCTGCATTGGT
++
+@A<:>>>;;<>?=<:>::>A?;=@<;:>>9>?<3:=:8>=39<1<=9?6?
+@853_1486_1272
+GCTATGTCCATATCGTGAATGCTTTCTTGCGTCGGGAGGCTTTTCATAGT
++
+7(7<<98656955)7:67/98%3(9/#,151#169=861<99%)),-%22
+@853_1487_496
+GTCGCACCCCTCCTAAACCCCAGATCAAAAACTGCACCCGCGACCCACTC
++
+6969=651<=::86774;7:<9=/69>0366/8,,8=:</6&31(3,/&)
+@853_1488_605
+TCGCCGCCAAACGATGCACTAATTTGCTTACCGGCCAGGCACGGATCGAA
++
+0)&)&1)/1(6)&(+),1=/*&&(&41,',)&1/(/,9/)1//<)&:15,
+@853_1489_374
+TAGTATGAGGACAATGAGTACCGATAGTTAGAGTGTACTTCCCGTCCCCT
++
+::;7.;98<;<;:<:<4;35;>95<6==<8/<<=8/==>:5=@/:;<=7<
+@853_1493_452
+GAAAGGACCAAACCAGGAGCATCCACCCATGGCCGCTAAACTAGGAGGAG
++
+$*)&'#,,,##(*#'%#%##(#))###%$$$##%###$#)###'#%%(%#
+@853_1493_1908
+AACATGTGCAAACCCTGCACCGGCAACGGGAGTGAGGACGCGAAAGGGAT
++
+@<=<====A@;><>?<==>AA=:?===:99;=:=:<<6:6:;96;<;797
+@853_1498_1797
+TGAAGGTCGCATGGCGCGGATTGCACAGCAGATCAACTGTTTCAAAAACA
++
+3=#&&04&',.8#*&-:&.*./$'#);%.$21'0&&/&###4$&%%0$#$
+@853_1499_1261
+GTGACACCTGTGGACGTCTAACAAGTATACCGTGTTTCAGCGGGCAGGTT
++
+>8=36</9587191791<7=<;38@6/51=5<31?9>(:</9:9;5<)7=
+@853_1509_820
+ACAAGAGACTACGAGGACACACTCCGGCCCTAAATCGCGAAAAACGGCCC
++
+',.1438/1)&1*3.18,72875),/*&://.4&),+/#+3%5*)56((&
+@853_1510_448
+TGAGATACTTTCGATCAGACCATCTGCGACCGGGAGAAGCTTTCCAACAA
++
+8;<5=6;7547@2;69?5:88>2556:4:88@42:;;72,8:,477<553
+@853_1511_561
+GCAAACCGTTCTGATGTAAACAACGTCAATTTGGGCCTTTACAAAGCGTT
++
+?A===@A?><A8A>:>9;;=@828;'#+99:#'9;;4#>6-1/89,-&45
+@853_1511_1886
+GACGTCGTCGTCGTCGTCGTTAACCCTAAGGTTCGCGGGACCCCTCAACA
++
+99;<=:>?<;=8;>=;8=<==9:8::==:9,8?:;)0<6.13;+:*5/:)
+@853_1530_202
+GGGGACTGAAGAGCGGCCATTAAGGGAGAATTGAGGAGAAGAGATGAGAA
++
+;<;99=:99>6>8:8<?:898A=2<7@88>)6#/+,&)(#,'-%#+-*%(
+@853_1530_1652
+GAGCTGGTACGAGTACGCACGTATGAACTTAATGTGCCATACGTAAATAA
++
+9:>;:>;<8@>8:;:9=<<;=<::>=>7:;;;;9;<=::85>;966=5/,
+@853_1569_1617
+TAATTGTATATAAATGCTGCATGCCGGGAAATTGTGCAGCTACGTGGAAG
++
+<A@=>?><<>=@@?=@?;=<=<9A<==;AA>;57:<?<;75>67695@:6
+@853_1570_1472
+CGACGCACGTCCGCAGGTACCAGGAACGTCATCCGTAACCGCGGGCACGC
++
+<=<>==;=:@>@<@==AA?A@>A?@<@?=A9>@?;>=9?<9>A>><3;=7
+@853_1585_323
+CAAGGGACTATAACTGAGGGGTGTGGAGCGGTTGGTTGGCCAGCGCATTA
++
+<;:>?<0<;;=;9781&(,95'+$-+2#,#'',1',$,$1/5+#2)6%&(
+@853_1585_2023
+AGGGGGATGCAGGCAAGACAAACGGCACGGGCGTGGGGAGAGGTCCCAAG
++
+?>@A>=44@@8<5A<7>:=?577<?867=>4588>:;88<59;<=:;)9=
+@853_1603_500
+GACCTATTCTGAGTCACCAAACGTTTCCCCTGGACCAAAGTCGGCCTGTT
++
+:<:78=:8<8:>2<59<8<<44593:9,&(7:#405:./(66212360/%
+@853_1603_1995
+CTGGTACCGGTATGAGCCTAGGATAGAGCGGCAACTCTTATACTGCCGGT
++
+9=:8;>>=<==<<>=AA@><A><<=?>?=<<??<<;?;;?<86=<9?=3;
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/bwa_wrapper_out1.sam	Fri Sep 28 13:53:48 2012 -0400
@@ -0,0 +1,30 @@
+seq1	16	phiX174	322	25	36M	*	0	0	GATATTTTAAAGGAGCGTGGATTACTATCTGAGTCC	B&&I13A$G$*%$IIIIIII9(.+5$IIIIIII#II	XT:A:U	NM:i:2	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:2C8A24
+seq10	0	phiX174	4149	37	17M1D19M	*	0	0	ATTCTTTCTTTTCGTATCAGGGCGTTGAGTTCGATA	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII	XT:A:U	NM:i:2	X0:i:1	X1:i:0	XM:i:1	XO:i:1	XG:i:1	MD:Z:5G11^G19
+seq11	0	phiX174	4072	37	18M1D18M	*	0	0	GCATTTCTACTCCTTCTCATCCCCAATGCTTGGCTT	II#IIIIIII$5+.(9IIIIIII$%*$G$A31I&&B	XT:A:U	NM:i:2	X0:i:1	X1:i:0	XM:i:1	XO:i:1	XG:i:1	MD:Z:12T5^A18
+seq12	4	*	0	0	*	*	0	0	CGCGCTTCGATAAAAATGGGATTGGCGTTTCCAACC	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+seq13	4	*	0	0	*	*	0	0	ATTTCTACTCTTTCTCATCCCCAATCCTTGCCTTCC	IIIIIIIIIIIIIIIIIIIIIAAIIIIIIIIIIIII
+seq14	0	phiX174	3998	37	21M1D15M	*	0	0	CCCTTTTGAATGTCACGCTGATATTTTGACTTTGAG	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII	XT:A:U	NM:i:2	X0:i:1	X1:i:0	XM:i:1	XO:i:1	XG:i:1	MD:Z:5C15^T15
+seq15	4	*	0	0	*	*	0	0	CCAACTTACCAAGGTGGGTTACGAAACGCGACGCCG	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+seq16	4	*	0	0	*	*	0	0	TCAGGGTATTAAAAGAGATTATTTTTCTCCAGCCAC	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+seq17	0	phiX174	3034	37	19M1D17M	*	0	0	GTGATGTGCTTGCTACCGAAACAATACTTTAGGCAT	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII	XT:A:U	NM:i:2	X0:i:1	X1:i:0	XM:i:1	XO:i:1	XG:i:1	MD:Z:19^T9G7
+seq18	4	*	0	0	*	*	0	0	TCAATCCCCCATGCTTGGCCGTTCCATAAGCAGATG	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+seq19	4	*	0	0	*	*	0	0	TTCCTGCGCTTAATGCTTGAGCGTCCTGGTGCTGAT	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+seq2	0	phiX174	141	37	36M	*	0	0	ATTCGACCTATCCTTGCGCAGCTCGAGAAGCTCTTA	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII	XT:A:U	NM:i:0	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:36
+seq20	0	phiX174	1082	37	36M	*	0	0	CTTATTACCATTTCAACTACTCCGGTTATCGCTGGC	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII	XT:A:U	NM:i:0	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:36
+seq21	0	phiX174	1344	37	15M1D21M	*	0	0	CTGATACCAATAAAACCCTAAGCATTTGGTTCAGGG	II#IIIIIII$5+.(9IIIIIII$%*$G$A31I&&B	XT:A:U	NM:i:2	X0:i:1	X1:i:0	XM:i:1	XO:i:1	XG:i:1	MD:Z:15^T13T7
+seq22	4	*	0	0	*	*	0	0	AATCAAACTTACCAAGGGGTTACGACGCGACGCCGT	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+seq23	4	*	0	0	*	*	0	0	TGTGCTTCCCCAACTTGATTTAATAACCCTATAGAC	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+seq24	0	phiX174	4084	37	17M1I18M	*	0	0	TTTCTCAATCCCCAATGCCTTGGCTTCCCTAAGCAG	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII	XT:A:U	NM:i:2	X0:i:1	X1:i:0	XM:i:1	XO:i:1	XG:i:1	MD:Z:27A7
+seq25	0	phiX174	520	37	16M1I19M	*	0	0	TTGCTACTGACCGCTCTTCGTGCTCGTTGCTGCGTT	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII	XT:A:U	NM:i:2	X0:i:1	X1:i:0	XM:i:1	XO:i:1	XG:i:1	MD:Z:26C8
+seq26	0	phiX174	1976	37	36M	*	0	0	CCGCGTGAAATTTCTATGAAGGATGTTTTCCGTTCT	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII	XT:A:U	NM:i:0	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:36
+seq27	0	phiX174	2598	37	20M1I15M	*	0	0	CGCTAATCAAGTTGTTTCTGTTTGGTGCTGATATTG	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII	XT:A:U	NM:i:2	X0:i:1	X1:i:0	XM:i:1	XO:i:1	XG:i:1	MD:Z:9G25
+seq28	4	*	0	0	*	*	0	0	AAAGAGATTATTTGTCGGTCCAGCCACTAAAGTGAG	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+seq29	4	*	0	0	*	*	0	0	CAAATTAATGCGCGCTTCGATAATGATTGGGGTATC	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+seq3	0	phiX174	505	37	36M	*	0	0	GTAACAAAGTTTGGATTGCTACTGACCGCTCTCGTG	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII	XT:A:U	NM:i:0	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:36
+seq30	0	phiX174	4091	37	18M1I17M	*	0	0	ATCCCCTATGCTTGGCTTACCATAAGCAGATGGATA	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII	XT:A:U	NM:i:2	X0:i:1	X1:i:0	XM:i:1	XO:i:1	XG:i:1	MD:Z:6A28
+seq4	4	*	0	0	*	*	0	0	AGCCGCTCGTCTTTTATGTAGGTGGTCAACCATTTT	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+seq5	0	phiX174	4985	25	36M	*	0	0	CAGTTATATGGCTTTTGGTTTCTATGTGGCTTAATA	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII	XT:A:U	NM:i:2	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:13G17A4
+seq6	0	phiX174	925	37	11M1D25M	*	0	0	AGGCGCTCGTCTTGGTATGTAGGTGGTCAACAATTT	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII	XT:A:U	NM:i:1	X0:i:1	X1:i:0	XM:i:0	XO:i:1	XG:i:1	MD:Z:11^T25
+seq7	0	phiX174	943	37	13M1I22M	*	0	0	TGTAGGTGGTCAACCAATTTTAATTGCAGGGGCTTC	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII	XT:A:U	NM:i:1	X0:i:1	X1:i:0	XM:i:0	XO:i:1	XG:i:1	MD:Z:35
+seq8	4	*	0	0	*	*	0	0	ACACCCGTCCTTTACGTCATGCGCTCTATTCTCTGG	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+seq9	0	phiX174	2596	37	16M1I19M	*	0	0	GCCGCTATTCAGGTTGTTTTCTGTTGGTGCTGATAT	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII	XT:A:U	NM:i:2	X0:i:1	X1:i:0	XM:i:1	XO:i:1	XG:i:1	MD:Z:7A27
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/bwa_wrapper_out2.sam	Fri Sep 28 13:53:48 2012 -0400
@@ -0,0 +1,30 @@
+seq1	16	phiX174	322	25	36M	*	0	0	GATATTTTAAAGGAGCGTGGATTACTATCTGAGTCC	B&&I13A$G$*%$IIIIIII9(.+5$IIIIIII#II	XT:A:U	NM:i:2	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:2C8A24
+seq2	0	phiX174	141	37	36M	*	0	0	ATTCGACCTATCCTTGCGCAGCTCGAGAAGCTCTTA	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII	XT:A:U	NM:i:0	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:36
+seq3	0	phiX174	505	37	36M	*	0	0	GTAACAAAGTTTGGATTGCTACTGACCGCTCTCGTG	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII	XT:A:U	NM:i:0	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:36
+seq4	4	*	0	0	*	*	0	0	AGCCGCTCGTCTTTTATGTAGGTGGTCAACCATTTT	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+seq5	0	phiX174	4985	25	36M	*	0	0	CAGTTATATGGCTTTTGGTTTCTATGTGGCTTAATA	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII	XT:A:U	NM:i:2	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:13G17A4
+seq6	0	phiX174	925	37	11M1D25M	*	0	0	AGGCGCTCGTCTTGGTATGTAGGTGGTCAACAATTT	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII	XT:A:U	NM:i:1	X0:i:1	X1:i:0	XM:i:0	XO:i:1	XG:i:1	MD:Z:11^T25
+seq7	0	phiX174	943	37	13M1I22M	*	0	0	TGTAGGTGGTCAACCAATTTTAATTGCAGGGGCTTC	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII	XT:A:U	NM:i:1	X0:i:1	X1:i:0	XM:i:0	XO:i:1	XG:i:1	MD:Z:35
+seq8	4	*	0	0	*	*	0	0	ACACCCGTCCTTTACGTCATGCGCTCTATTCTCTGG	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+seq9	0	phiX174	2596	37	16M1I19M	*	0	0	GCCGCTATTCAGGTTGTTTTCTGTTGGTGCTGATAT	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII	XT:A:U	NM:i:2	X0:i:1	X1:i:0	XM:i:1	XO:i:1	XG:i:1	MD:Z:7A27
+seq10	0	phiX174	4149	37	17M1D19M	*	0	0	ATTCTTTCTTTTCGTATCAGGGCGTTGAGTTCGATA	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII	XT:A:U	NM:i:2	X0:i:1	X1:i:0	XM:i:1	XO:i:1	XG:i:1	MD:Z:5G11^G19
+seq11	0	phiX174	4072	37	18M1D18M	*	0	0	GCATTTCTACTCCTTCTCATCCCCAATGCTTGGCTT	II#IIIIIII$5+.(9IIIIIII$%*$G$A31I&&B	XT:A:U	NM:i:2	X0:i:1	X1:i:0	XM:i:1	XO:i:1	XG:i:1	MD:Z:12T5^A18
+seq12	4	*	0	0	*	*	0	0	CGCGCTTCGATAAAAATGGGATTGGCGTTTCCAACC	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+seq13	4	*	0	0	*	*	0	0	ATTTCTACTCTTTCTCATCCCCAATCCTTGCCTTCC	IIIIIIIIIIIIIIIIIIIIIAAIIIIIIIIIIIII
+seq14	0	phiX174	3998	37	21M1D15M	*	0	0	CCCTTTTGAATGTCACGCTGATATTTTGACTTTGAG	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII	XT:A:U	NM:i:2	X0:i:1	X1:i:0	XM:i:1	XO:i:1	XG:i:1	MD:Z:5C15^T15
+seq15	4	*	0	0	*	*	0	0	CCAACTTACCAAGGTGGGTTACGAAACGCGACGCCG	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+seq16	4	*	0	0	*	*	0	0	TCAGGGTATTAAAAGAGATTATTTTTCTCCAGCCAC	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+seq17	0	phiX174	3034	37	19M1D17M	*	0	0	GTGATGTGCTTGCTACCGAAACAATACTTTAGGCAT	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII	XT:A:U	NM:i:2	X0:i:1	X1:i:0	XM:i:1	XO:i:1	XG:i:1	MD:Z:19^T9G7
+seq18	4	*	0	0	*	*	0	0	TCAATCCCCCATGCTTGGCCGTTCCATAAGCAGATG	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+seq19	4	*	0	0	*	*	0	0	TTCCTGCGCTTAATGCTTGAGCGTCCTGGTGCTGAT	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+seq20	0	phiX174	1082	37	36M	*	0	0	CTTATTACCATTTCAACTACTCCGGTTATCGCTGGC	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII	XT:A:U	NM:i:0	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:36
+seq21	0	phiX174	1344	37	15M1D21M	*	0	0	CTGATACCAATAAAACCCTAAGCATTTGGTTCAGGG	II#IIIIIII$5+.(9IIIIIII$%*$G$A31I&&B	XT:A:U	NM:i:2	X0:i:1	X1:i:0	XM:i:1	XO:i:1	XG:i:1	MD:Z:15^T13T7
+seq22	4	*	0	0	*	*	0	0	AATCAAACTTACCAAGGGGTTACGACGCGACGCCGT	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+seq23	4	*	0	0	*	*	0	0	TGTGCTTCCCCAACTTGATTTAATAACCCTATAGAC	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+seq24	0	phiX174	4084	37	17M1I18M	*	0	0	TTTCTCAATCCCCAATGCCTTGGCTTCCCTAAGCAG	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII	XT:A:U	NM:i:2	X0:i:1	X1:i:0	XM:i:1	XO:i:1	XG:i:1	MD:Z:27A7
+seq25	0	phiX174	520	37	16M1I19M	*	0	0	TTGCTACTGACCGCTCTTCGTGCTCGTTGCTGCGTT	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII	XT:A:U	NM:i:2	X0:i:1	X1:i:0	XM:i:1	XO:i:1	XG:i:1	MD:Z:26C8
+seq26	0	phiX174	1976	37	36M	*	0	0	CCGCGTGAAATTTCTATGAAGGATGTTTTCCGTTCT	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII	XT:A:U	NM:i:0	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:36
+seq27	0	phiX174	2598	37	20M1I15M	*	0	0	CGCTAATCAAGTTGTTTCTGTTTGGTGCTGATATTG	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII	XT:A:U	NM:i:2	X0:i:1	X1:i:0	XM:i:1	XO:i:1	XG:i:1	MD:Z:9G25
+seq28	4	*	0	0	*	*	0	0	AAAGAGATTATTTGTCGGTCCAGCCACTAAAGTGAG	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+seq29	4	*	0	0	*	*	0	0	CAAATTAATGCGCGCTTCGATAATGATTGGGGTATC	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
+seq30	0	phiX174	4091	37	18M1I17M	*	0	0	ATCCCCTATGCTTGGCTTACCATAAGCAGATGGATA	IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII	XT:A:U	NM:i:2	X0:i:1	X1:i:0	XM:i:1	XO:i:1	XG:i:1	MD:Z:6A28
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/bwa_wrapper_out3.sam	Fri Sep 28 13:53:48 2012 -0400
@@ -0,0 +1,63 @@
+@SQ	SN:phiX174	LN:5386
+@RG	ID:abcdefg	LB:lib-mom-A	PL:ILLUMINA	SM:mom	DS:descrip	DT:2010-11-01	PI:400
+@PG	ID:bwa	PN:bwa	VN:0.5.9-r16
+seq1	113	phiX174	340	37	18M	=	322	-18	GGATTACTATCTGAGTCC	II9(.+5$IIIIIII#II	RG:Z:abcdefg	XT:A:U	NM:i:0	SM:i:37	AM:i:25	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:18
+seq1	177	phiX174	322	25	18M	=	340	18	GATATTTTAAAGGAGCGT	B&&I13A$G$*%$IIIII	RG:Z:abcdefg	XT:A:U	NM:i:2	SM:i:25	AM:i:25	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:2C8A6
+seq2	65	phiX174	141	37	18M	=	159	18	ATTCGACCTATCCTTGCG	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:0	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:18
+seq2	129	phiX174	159	37	18M	=	141	-18	CAGCTCGAGAAGCTCTTA	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:0	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:18
+seq3	65	phiX174	505	37	18M	=	523	18	GTAACAAAGTTTGGATTG	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:0	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:18
+seq3	129	phiX174	523	37	18M	=	505	-18	CTACTGACCGCTCTCGTG	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:0	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:18
+seq4	69	phiX174	945	0	*	=	945	0	AGCCGCTCGTCTTTTATG	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg
+seq4	137	phiX174	945	23	18M	=	945	0	TAGGTGGTCAACCATTTT	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:1	SM:i:23	AM:i:0	X0:i:1	X1:i:1	XM:i:1	XO:i:0	XG:i:0	MD:Z:12A5	XA:Z:phiX174,+945,17M1S,2;
+seq5	65	phiX174	4985	37	18M	=	5003	18	CAGTTATATGGCTTTTGG	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:1	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:13G4
+seq5	129	phiX174	5003	37	18M	=	4985	-18	TTTCTATGTGGCTTAATA	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:1	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:13A4
+seq6	65	phiX174	925	37	11M1D7M	=	944	19	AGGCGCTCGTCTTGGTAT	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:1	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:0	XO:i:1	XG:i:1	MD:Z:11^T7
+seq6	129	phiX174	944	37	18M	=	925	-19	GTAGGTGGTCAACAATTT	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:0	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:18
+seq7	65	phiX174	943	25	18M	=	960	17	TGTAGGTGGTCAACCAAT	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:2	SM:i:25	AM:i:25	X0:i:1	X1:i:1	XM:i:2	XO:i:0	XG:i:0	MD:Z:14A1T1	XA:Z:phiX174,+943,13M1I4M,2;
+seq7	129	phiX174	960	37	18M	=	943	-17	TTTAATTGCAGGGGCTTC	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:0	SM:i:37	AM:i:25	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:18
+seq8	69	phiX174	1715	0	*	=	1715	0	ACACCCGTCCTTTACGTC	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg
+seq8	137	phiX174	1715	37	18M	=	1715	0	ATGCGCTCTATTCTCTGG	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:10A7
+seq9	65	phiX174	2596	37	18M	=	2613	17	GCCGCTATTCAGGTTGTT	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:1	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:7A10
+seq9	129	phiX174	2613	37	18M	=	2596	-17	TTCTGTTGGTGCTGATAT	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:0	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:18
+seq10	65	phiX174	4149	25	18M	=	4168	19	ATTCTTTCTTTTCGTATC	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:2	SM:i:25	AM:i:25	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:5G11G0
+seq10	129	phiX174	4168	37	18M	=	4149	-19	AGGGCGTTGAGTTCGATA	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:0	SM:i:37	AM:i:25	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:18
+seq11	65	phiX174	4072	37	18M	=	4091	19	GCATTTCTACTCCTTCTC	II#IIIIIII$5+.(9II	RG:Z:abcdefg	XT:A:U	NM:i:1	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:12T5
+seq11	129	phiX174	4091	37	18M	=	4072	-19	ATCCCCAATGCTTGGCTT	IIIII$%*$G$A31I&&B	RG:Z:abcdefg	XT:A:U	NM:i:0	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:18
+seq12	65	phiX174	5349	37	18M	=	5365	16	CGCGCTTCGATAAAAATG	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:0	SM:i:37	AM:i:25	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:18
+seq12	129	phiX174	5365	25	18M	=	5349	-16	GGATTGGCGTTTCCAACC	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:2	SM:i:25	AM:i:25	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:0T9A7
+seq13	65	phiX174	4074	37	18M	=	4093	19	ATTTCTACTCTTTCTCAT	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:1	SM:i:37	AM:i:25	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:17A0
+seq13	129	phiX174	4093	25	18M	=	4074	-19	CCCCAATCCTTGCCTTCC	IIIAAIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:2	SM:i:25	AM:i:25	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:7G4G5
+seq14	65	phiX174	3998	37	18M	=	4016	18	CCCTTTTGAATGTCACGC	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:1	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:5C12
+seq14	129	phiX174	4016	37	3M1D15M	=	3998	-18	TGATATTTTGACTTTGAG	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:1	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:0	XO:i:1	XG:i:1	MD:Z:3^T15
+seq15	65	phiX174	5198	37	18M	=	5216	18	CCAACTTACCAAGGTGGG	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:1	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:13C4
+seq15	129	phiX174	5216	37	5M2I11M	=	5198	-18	TTACGAAACGCGACGCCG	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:2	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:0	XO:i:1	XG:i:2	MD:Z:16
+seq16	65	phiX174	2880	37	10M1I7M	=	2897	17	TCAGGGTATTAAAAGAGA	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:2	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:1	XO:i:1	XG:i:1	MD:Z:5T11
+seq16	129	phiX174	2897	37	18M	=	2880	-17	TTATTTTTCTCCAGCCAC	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:1	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:6G11
+seq17	65	phiX174	3034	37	18M	=	3053	19	GTGATGTGCTTGCTACCG	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:0	SM:i:37	AM:i:25	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:18
+seq17	129	phiX174	3053	25	18M	=	3034	-19	AAACAATACTTTAGGCAT	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:2	SM:i:25	AM:i:25	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:0T9G7
+seq18	73	phiX174	4088	37	18M	=	4088	0	TCAATCCCCCATGCTTGG	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:9A8
+seq18	133	phiX174	4088	0	*	=	4088	0	CCGTTCCATAAGCAGATG	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg
+seq19	65	phiX174	3304	37	18M	=	3324	20	TTCCTGCGCTTAATGCTT	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:1	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:6A11
+seq19	129	phiX174	3324	37	18M	=	3304	-20	GAGCGTCCTGGTGCTGAT	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:1	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:6G11
+seq20	65	phiX174	1082	37	18M	=	1100	18	CTTATTACCATTTCAACT	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:0	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:18
+seq20	129	phiX174	1100	37	18M	=	1082	-18	ACTCCGGTTATCGCTGGC	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:0	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:18
+seq21	65	phiX174	1344	23	18M	=	1363	19	CTGATACCAATAAAACCC	II#IIIIIII$5+.(9II	RG:Z:abcdefg	XT:A:U	NM:i:1	SM:i:23	AM:i:23	X0:i:1	X1:i:1	XM:i:1	XO:i:0	XG:i:0	MD:Z:15T2	XA:Z:phiX174,+1344,15M1D3M,2;
+seq21	129	phiX174	1363	37	18M	=	1344	-19	TAAGCATTTGGTTCAGGG	IIIII$%*$G$A31I&&B	RG:Z:abcdefg	XT:A:U	NM:i:1	SM:i:37	AM:i:23	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:10T7
+seq22	69	phiX174	5215	0	*	=	5215	0	AATCAAACTTACCAAGGG	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg
+seq22	137	phiX174	5215	37	18M	=	5215	0	GTTACGACGCGACGCCGT	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:18
+seq23	65	phiX174	4289	37	18M	=	4308	19	TGTGCTTCCCCAACTTGA	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:1	SM:i:37	AM:i:25	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:6C11
+seq23	129	phiX174	4308	25	18M	=	4289	-19	TTTAATAACCCTATAGAC	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:2	SM:i:25	AM:i:25	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:0A8A8
+seq24	65	phiX174	4084	37	18M	=	4101	17	TTTCTCAATCCCCAATGC	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:0	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:18
+seq24	129	phiX174	4101	37	18M	=	4084	-17	CTTGGCTTCCCTAAGCAG	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:1	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:10A7
+seq25	65	phiX174	520	37	18M	=	537	17	TTGCTACTGACCGCTCTT	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:1	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:17C0
+seq25	129	phiX174	537	37	18M	=	520	-17	CGTGCTCGTTGCTGCGTT	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:1	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:9C8
+seq26	65	phiX174	1976	37	18M	=	1994	18	CCGCGTGAAATTTCTATG	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:0	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:18
+seq26	129	phiX174	1994	37	18M	=	1976	-18	AAGGATGTTTTCCGTTCT	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:0	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:18
+seq27	65	phiX174	2598	37	18M	=	2614	16	CGCTAATCAAGTTGTTTC	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:1	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:9G8
+seq27	129	phiX174	2614	37	3M1D15M	=	2598	-16	TGTTTGGTGCTGATATTG	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:2	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:0	XO:i:1	XG:i:1	MD:Z:1C1^G15
+seq28	65	phiX174	2890	25	18M	=	2906	16	AAAGAGATTATTTGTCGG	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:2	SM:i:25	AM:i:25	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:16T0C0
+seq28	129	phiX174	2906	37	18M	=	2890	-16	TCCAGCCACTAAAGTGAG	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:1	SM:i:37	AM:i:25	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:10T7
+seq29	73	phiX174	5339	37	18M	=	5339	0	CAAATTAATGCGCGCTTC	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:6T11
+seq29	133	phiX174	5339	0	*	=	5339	0	GATAATGATTGGGGTATC	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg
+seq30	65	phiX174	4091	37	18M	=	4108	17	ATCCCCTATGCTTGGCTT	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:1	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:6A11
+seq30	129	phiX174	4108	37	18M	=	4091	-17	ACCATAAGCAGATGGATA	IIIIIIIIIIIIIIIIII	RG:Z:abcdefg	XT:A:U	NM:i:1	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:0T17
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/bwa_wrapper_out4.sam	Fri Sep 28 13:53:48 2012 -0400
@@ -0,0 +1,202 @@
+427_1253_1057_F3	0	chrX_part	14947	37	49M	*	0	0	TTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTTTTCATGTGTCT	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]VZ	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:49
+427_1299_965_F3	16	chrX_part	13217	25	49M	*	0	0	GGGATGCTCTCTCTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTG	][]]]]Y]]]]Z]]]]]]]]]Z]]]]Y]]]]]]]]Y]]]]]]]]]]]]]	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:7C41
+427_12_1018_F3	4	*	0	0	*	*	0	0	CTCTTCTCCTCCGGACTAGAGGCCCGGGCAATCAAGGCTGCGTAGACGTA	>?<;5@:>>5>7:?<7@><=:>?92<?5>=;@@>?2<?>:?<9<4>56?@
+427_12_390_F3	4	*	0	0	*	*	0	0	AAGGGAGTGGTGCTGGTGGGAGGCAATTTGTCGGACCTGGGAAGCGAGTC	BBB>=;@@A6<A;=>=A?>??@A58@B>9>>@?70?@<=>>@A9/5?=25
+427_12_550_F3	4	*	0	0	*	*	0	0	CGATCTCTGCAACTTCGTGCGCAGGCGATGGGGGGGAAAATGAACGGATA	8A=?<BA@=;?A;?><B?;:5@.<:7?9;6<A62<@;8<==@3:>;=339
+427_12_941_F3	4	*	0	0	*	*	0	0	GGGCCAAAGTAAACGCTAATCGAGGAGGACAAAGTAAGGAAGGCGCCTGT	B@72=>?A:;<:?>?94B??;3A<?1@<3=<A?8>A6?>=>7A/>=07<@
+427_13_422_F3	4	*	0	0	*	*	0	0	AATAACGAAGCGTGTGTGTTAGCGGGAGAGCCGGGCCCCTTCCCGTACGT	9>A2,9@9<8<=;;7=7:>@1<:?37<1>1690>7=<:=A/>53.::<=/
+427_13_494_F3	4	*	0	0	*	*	0	0	CGACTACCCCTACCGGTCACCGCTACGGTGAGGCTAAGCTCTTCCAGACG	.>>?@;A@?7?@<>39?>=7:==76;=;=65@:::9?8?3=@8=::@2<.
+427_13_606_F3	4	*	0	0	*	*	0	0	TTTAACGCGATAATCCTTCGAAGGAAAAGAAGTGACTTTCCGTACATACC	BB?A?@A??>B@A@<=@A==A>>>>AA@7<?:B=9<@A@A@2@>8><;<=
+427_13_861_F3	4	*	0	0	*	*	0	0	CGAGGTGCAGGCCTGCTCTGGGGACCCACTGTGACCAGGCGGCCTGCCAC	=>>@<@>BB>>58A=@A<BABA:=>@B:==?A9<AA@7::@;??:A?;2>
+427_13_961_F3	4	*	0	0	*	*	0	0	GACGGGAGACGCTGCGATCGCACCTTAATGGGGGACCGGATGCACAAAAG	@BBBBB@BB@B>BBAB@B@AB@ABAABBA?B?B@>@@BA=A?A:<>BBB3
+427_1444_687_F3	16	chrX_part	25682	37	49M	*	0	0	TCATTCTCAGCAAACTATCGCAAGGACAAAAAACCAAACACCGCATGTT	]\]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+427_14_1010_F3	4	*	0	0	*	*	0	0	GCTGCTGTGGCCGGGCGCACCCAGACAGGTAGAAAGCCGACTCACCACGT	@??A><@=ABA@?A?A@A??AB@AA@=<?B;<@?A<94?A=5;:@@2?@9
+427_14_270_F3	4	*	0	0	*	*	0	0	GCAGATGCGTGGAGCAACGGTGGTCTGTAGATCGTCAGGATCTGAAACCA	A=A@?BB>@9@BAA89>A@:A@@>2@A;383B><;:;>=1=8B:<>=?8=
+427_14_376_F3	4	*	0	0	*	*	0	0	TCACACGCAGGGCCCCGTACGGAGAATACTGCTCAATGAAAATGGAGGGG	B9??@BA@;?BB@@>AA?:?>A><=<A:4=5<?;=<?;?:95=61;<:<2
+427_14_602_F3	4	*	0	0	*	*	0	0	GGCCGGTTGGTCGACTAGGCAGGCCGACAATGCCTGAACATACTAGGGCC	,B=7==A:9;AA45,=:9/.2<;58>9806:=>:<8=877?=9198>:2:
+427_14_665_F3	4	*	0	0	*	*	0	0	CATACGAGGGAGTCTCTAGCATAAAGCTGGGTCCCCTGACATTGACCTGA	<A@@>B7<A5@>@>>>;<@68,9@;<-<<:>9?@?>6.A65=;=8569;5
+427_1522_8_F3	0	chrX_part	12254	0	49M	*	0	0	ACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCAC	)]]]]]]]]]]]]]PU]]][]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	XT:A:R	CM:i:1	X0:i:2	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:34C14	XA:Z:chrX_part,+26921,49M,3;
+427_15_1039_F3	4	*	0	0	*	*	0	0	AGAGTCAACTGAAGCTTCCGAGTCGTGAACGGGGGGAGGAGAGGGAAGGC	BBB@@@B?A?ABB><A>?9=:=<:@:?>51:AA>?87>?979<>><>>=<
+427_15_1070_F3	4	*	0	0	*	*	0	0	CTACTCCCTGCATTAGATACTGGAGCTCGGCTAGAGGGATGGCGTTAAAG	=>A<@><?BAA?A?>?4??=;>?@>??=:@<6?98==><<:;<8A:7=@5
+427_15_1081_F3	4	*	0	0	*	*	0	0	GCTCCTCCACGATTAATCGTTGGGGTGCAATGAGAAAACAGCCAATGGCC	@=AAAB@?@>?B@?=BB@?@B=@>;B@3:?BA39?>@7==<<<A?A<1A?
+427_15_423_F3	4	*	0	0	*	*	0	0	GCTGGAGGAGAAAGGGGGGACCCGCAATCGAGCGTCCGATAATGAAATGG	>/B@=<A=??@B>A>B@@>9?@=A6@B@9?5@6A7A@>@A?=?A/@@A?=
+427_15_646_F3	4	*	0	0	*	*	0	0	CAGTTCGCTTGGTCAATCAATATAGAGAACCTGGGGAGTAGTGTCCGGAG	?@=?>=A?@??B876:@65.B<914;;<06=?914:67997;5<:/7771
+427_15_872_F3	4	*	0	0	*	*	0	0	CGGGTAGACTTTAGTACCTAGACGAAGGGAGTGACATGACGTCGCGTACA	<:??A@B@B==>@>A:6=?;5<::30<==63@;;1?=;A5,=7<,4;6@0
+427_16_1107_F3	4	*	0	0	*	*	0	0	TGTGTAAGTGAGACACGAGAAGCAAGAACTGATGCCCTGCAGGGTTTAGG	<+>B><:;A@B?:>>:A7B5;B@?B>8;:>8=B:B@=;@25A9A=>@1A:
+427_16_264_F3	4	*	0	0	*	*	0	0	CCCGATCCTAGGCAGAATCGAGAGAGACCACAACCCGCGAAAACCATTGC	@<>?@@?AA?@??@>>?;:A>>A=?>=?>?:A>@@@:A8@@@:>/@>A4=
+427_16_565_F3	4	*	0	0	*	*	0	0	AGCTATGGAATACCAAGACATCCAAGGAACTACTGCCGAAGGTTCCGGAG	BB1AABB9@@B>3>=@@,?AB<8A>@@9<=BA8<<>>4A??@:??<?6@<
+427_17_1027_F3	4	*	0	0	*	*	0	0	CAGTGCAATGGGAGTAAAGCAAATTCGGCAGCCCGTGGCCGAACCGCTTG	A@@BAB=>B>BAA?5>=AA8:@B@;=@?@9:>BB::?@A54=B?<0<B@:
+427_17_342_F3	4	*	0	0	*	*	0	0	AGCTGGAGCTGCTGCCACGGACAAGGTCGGAGCTGAGGCTGGCTGGACTA	BA?A?BB>>ABB@;;AA@@>AA>=ABB1??:B6>?>B72>@B49>?@3<<
+427_17_446_F3	4	*	0	0	*	*	0	0	TATGCCGTGAGACGGGGGGAAACAGACCCTACCCCGATGTATAAGGCCGG	=B?>8>BA?=>B;?;>A;:<=?937;?=2;6:==;9=@3?9;51;9:149
+427_17_46_F3	4	*	0	0	*	*	0	0	CCAATGAATGAAACAGGGTACCCGCGAGCGCCTGCTGAGCTGACAGTCTC	:.>A:@>@?7A@<=2?;6?;>;99=<:8;95>0:><14;@4:><:,;:8?
+427_17_917_F3	4	*	0	0	*	*	0	0	AAGACTACGCGTTAGGCCAAGAGAAAGACTCAAGAGACGACCTCTAAGAT	@@=???A6=-;A:3<@?866@94:20<11@3;19:=:/:9<<45B@:48B
+427_1891_897_F3	16	chrX_part	26846	37	49M	*	0	0	GGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATC	]]]]]]]]]]]]]]]QW]]]Z]]]]]]]]]PX]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+427_18_267_F3	4	*	0	0	*	*	0	0	CTGGCACCGAACGGAGGAAGAAATTGCGTAGATTACAGTAATCAGAAGAC	AB@A;>@A@>AAAB:8B<>>@B@A=@?=@;=A<A3>?;@@?<:>+A?;A.
+427_18_481_F3	4	*	0	0	*	*	0	0	GGCTCGCCCCAGTATCGACGTCGTATGAGAGATGACGAGGCCCGGGCGAG	AB>?;B@A>=AAA@@@A?=6B=><=B=<8>=7A2=<==5;@5>7<=3=>;
+427_18_706_F3	4	*	0	0	*	*	0	0	CTCTATATGGAAGGTTACTACTCAGTAACCTTAGGGACCAAGAACCGGTT	>AAA@B?BAABAAAAA@@@A?B?>=B?@>>B@6??@><@@?:?A;<?=??
+427_18_834_F3	4	*	0	0	*	*	0	0	GGGACCCGACCTAGGACGGACAAAGACAGGGACGACAGATATACGATTCA	@@@@><?A><@A?@7@A@@6=><?;<;;7@>=?=:<:<;>=6=/:A?B?4
+427_18_846_F3	4	*	0	0	*	*	0	0	GGACGCGTCACCAGAAAAACTAGGGGACGGTCCACGACCATGACGGGGAG	BABB>BBBB7BBA@@ABBB1<BABA<B<A89BB?21A@@22@@A?>A@=?
+427_1927_689_F3	0	chrX_part	26924	0	49M	*	0	0	AGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATC	]]ZY]]]Z[]]]ZROQFMVZ]ZYUV]ZXSLTWZUT]]]]]]Z\[ZXW[T	XT:A:R	CM:i:1	X0:i:3	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:34T14	XA:Z:chrX_part,+14818,49M,2;chrX_part,+12257,49M,2;
+427_19_1049_F3	4	*	0	0	*	*	0	0	TCCGCTTGGAACATACTAAAGGAGAGTATATAGATGACCAGGAAAAGCTT	?<>@:A?@B>B=>@@?>AA?B>@@@BB35@B>98<>A5/AB><<BB>8<:
+427_19_11_F3	4	*	0	0	*	*	0	0	CAGCCCACATGCACCCACTGGGAAGGCCACCCATGAGAAACTCCACGATC	=1:<4>?><;=?><1?:>?7>=>=:<=<99:><<55;>>,@=>93>/15:
+427_19_137_F3	4	*	0	0	*	*	0	0	AAGCTGACGCTACCACGGACAACAGCGGTCAAGGCCGTCAGGCGAAGCGG	?78;?@?<>;=AA=;7?9<8;=<:<8><968;<9;:<:;::<53;=7+85
+427_19_296_F3	4	*	0	0	*	*	0	0	CCAGAAACCTCAGCAACACACCACCTAGGCCCCCAGGGTCGGAAGATGCA	B@BABBB@BBBBAA@<AAAB>@A@?AA@?@>A=?9>?>?@@@?@=?A<@@
+427_19_324_F3	4	*	0	0	*	*	0	0	TGGACGATTTAATGGCAGGGAAGTGAGACAAGACTGGGGTCTGCGAAAAA	A;=?3A>>:>>:<87:8483>>627=;40596=885:66>3810/843:9
+427_19_533_F3	4	*	0	0	*	*	0	0	GAAAGCTCGATCGTTCGACTTTTCTTCGTCTGAGTCAATCAGACTTGGCA	BA@@?>@A?>A@@@@?@<=BAB?>BA?<>3B?<;@?AB?7><@@@AA6?-
+427_19_899_F3	4	*	0	0	*	*	0	0	CATACCGTAGCCCAGGCAAGGAGACGCTCAGTGTAACAAGACGCAGTCGA	@??B>=@<A?;@5AA8=6@B<:3A>6=57@9A2?A=;:A?4>,9A7=48@
+427_20_363_F3	4	*	0	0	*	*	0	0	GACGTCGAGATACGGTACCCGGGCTATATTTTAGACGACTTAAAACTAGA	AAAA>@B>A+BB@A7B@?<==?>=@.@9?=>A=<<1><>>>=@@?74?.@
+427_20_407_F3	4	*	0	0	*	*	0	0	ATAACGGACACCTAAGAAGAGGGAGTTAACATCCAGCGTAGGGCGCGTAC	BBBB?BBB?ABBBBABB@>BBB?@?AB?@@2B?@;@94B@AB??;/?@>=
+427_20_608_F3	4	*	0	0	*	*	0	0	ACAGCACGCGGCTGCAGGAGGGAGAGAGGGGCAAGACGGACGGGCCTGTG	B@9<AB?35>@>9?=AB7:@@A6<@A=>=A@@=<=?@<;:=<-<@:=0=:
+427_20_892_F3	4	*	0	0	*	*	0	0	GACACTCCATGGGTTCGCCGTACGTCAATGCCGACTGAAGAAGCCAGAGG	A@A@?A@@>@BA?AA@>@>?B@AABB?AB:@A>?AB<BB@A@>@>>9>?=
+427_20_982_F3	4	*	0	0	*	*	0	0	TCCCGCGCAAACATCCTGATCAAAACCATCTCCCTGACGGTGGGCTTGAT	@??>>>?98@@<36:;=:9=?:89<>9;.:7??/734:40;09.8<1834
+427_21_328_F3	4	*	0	0	*	*	0	0	TGTGCGTCTAACCCCCCCCAGGGCGACGAGCTGGGAAGGCGTGAACAAGC	B@>>@BB;A?BB?A>AA>;8BB>:<@@<7<AB==>?><>9@A:=7A@/<=
+427_21_334_F3	4	*	0	0	*	*	0	0	AACAGTAAACAGTAAGGGGGAGAAGGGGCTCTGGACGATGAAGAGGGGGG	AB>4>?B@84>@>@;@BA<=<A<3@?A;1=6?=8>@=?7;A=<<?<;<69
+427_21_366_F3	4	*	0	0	*	*	0	0	CTACCCCCAGCTTTCCCCGTTGCCTGCGGCCCAGCGGTGGGGCCCATGAG	>AA?@@@@>?>B=B><B@?A@AA;B?A=7:<B<>A9>B=@<BA?B>@;?7
+427_21_473_F3	4	*	0	0	*	*	0	0	GATGCATGGACGAACCACGCTGGGCAGGACGAATTCTACCGGGCTCGAGA	BA?<>>B:>8=B@@8=<==;@A>@;<@;=<69/=<7>5<>4?9;91;36>
+427_21_537_F3	4	*	0	0	*	*	0	0	AAGCAGTCATAGGGAGCTAGGCGTAGAGAGCGGCTGTGCAAGTCCAGACG	AB@@@ABA:A?B@B>>AB=A@@;A?@A@?>8?A<A>=><@@4>=@@7:=9
+427_21_563_F3	4	*	0	0	*	*	0	0	CGACAATTCTCGATCGTAGCCAGTATAAGAGACACAAATGCGAGGACTTC	>@AAAAA@?=>BAA>=A@@??>=A==@@?@<A:@>:A@@=9>@<@+>=@A
+427_22_56_F3	4	*	0	0	*	*	0	0	GAGGCACCGTCACAAACTAACTACGTCGCTGGTTGCTCGCGATGAAGGGG	?>=>.?A@?9AB>;?7@A<<=B:;<@7=:?6:B:;3?>0@38A3??<8<<
+427_22_692_F3	4	*	0	0	*	*	0	0	CGCGATACGAAAGGGGAATCGCCGAACCCGTAAACTAGATTAAGGGAAGA	:?;<>B>:@>A>>AAA71@=<?3>2=>?7;9<<7;?7<>9?=+=?-?=7;
+427_22_787_F3	4	*	0	0	*	*	0	0	CGGTGGCAAGTACGCCGGTAGAGAGGGGGGGGGGGCCGGGGGGCTCATCT	<@5>:@@<76@A;;;;A7=;<><;8>A;4;>A<965+;<;<>598;6<82
+427_22_927_F3	4	*	0	0	*	*	0	0	TCAAACAGAGTAACTTGATTGGTTCCTAAGTGGTACAAGAGGTCGAGGAA	@ABB@>?A??BAB@AB=A?B@@BB@A=@A@B<?9=?>=7<?>><9<>>?;
+427_23_177_F3	4	*	0	0	*	*	0	0	CTGAACGGTGAACCAAGGCTGCGGCACATGCCAGGCCATTTTTGGTTATC	>A@AA@@@A>BA>@=?A@>AA<>>=@@:?=>A<=>>>2BAAA4:,A?6A8
+427_23_740_F3	4	*	0	0	*	*	0	0	GCAATCATCAGGTTCGGACTGCCACGCAAACTCTGAGAGGATTTTCTAGA	B@@AB@<?@AA@A?@?A@?>A;@>@B;?AA=2>?@A/A=A@A@@B<??7>
+427_23_874_F3	4	*	0	0	*	*	0	0	GGAGAACTCTAAGAAAGAACTTTAAACCAGTCTTGCCCCCCGATCGTGAA	<@ABBBAB=AABAAA@@BA<>A@@B?A??=A@B@@@B<BBB<=<@:>?>:
+427_23_986_F3	4	*	0	0	*	*	0	0	CGGTCTGTTTTGCGGGACACGAGGTCGTGAACTAGACTGCGGGTGCATCG	@6=??@<<><>@A@:<=<;==>@;3=>8=;>::?8@?9=99=4:6@<67;
+427_23_993_F3	4	*	0	0	*	*	0	0	AGACTCCGGGACAATGAGTCCAGCAGAGGGTGATGAAGGAACGAACGGAA	@>BAAA?BBB@?B@BA@ABAB?B?A@A?AAB@<AA?>@=AA<ABB@:@AA
+427_24_1040_F3	4	*	0	0	*	*	0	0	CCATTTTCCCAGTGAGCACCCTTGCTTCCAATCAGGGGACTGGCTCAGAA	45/2<9A@A93A7<5:;@6=<A:7=:B5740@<698=3<:8:8-:5,220
+427_24_476_F3	4	*	0	0	*	*	0	0	CAGCAGGTCCAAACGTGGATCCGCGGGCGGAGAAGGCGACACAGGGCAAA	=B>:>>A<<76===6=?;3=;<<45<=6,876968:-256;693464<<<
+427_24_880_F3	4	*	0	0	*	*	0	0	CGTAGGTAGGCCAGGCGAGGTATTCTATCTGGGCGCAATTACCAGGAACA	AAA+AB@?;@AA?;?ABA>AB>B:=BAA+@=A>4?>A?=@4?;2>9A=1?
+427_24_952_F3	4	*	0	0	*	*	0	0	GGTTTTTCCTTGTTCATGTGTAATCCAGTATGGAGGGCCAAAGAGAGTCC	@?B>@9?@-16=9<54:-<53=6>:2;.41/<176,>8137;5:.9=905
+427_25_234_F3	4	*	0	0	*	*	0	0	TATCAAGCAACGGGTGTATGGGGGAAGAGAAAGGCGATCCCACCAGATCA	0>@</1A7<+8A64::>4<9<@88=9>94<8@:7<9=>;?8:;195:<5>
+427_25_60_F3	4	*	0	0	*	*	0	0	TGAGGTATGGGAGTCGTAGGCGCACTCGAGGCGCCTGAGGAAACACCCTC	A/>>=?==>:>>8?:>=.=>9>84:@:96<7>6<=<93<<5;>:8==.1<
+427_25_854_F3	4	*	0	0	*	*	0	0	AGCACTCGCGTAGACAATCGACAGCCCTGACCGAGCGAATAAGGGCTGAA	AA@BBB?AB=B@@@>=;B;@4?B9?=@B;@6A?9=<:A@A6:73@55>2>
+427_26_256_F3	4	*	0	0	*	*	0	0	GAGGGCCGGGGGGCGATCGAAGAGTCTCGAGACGAGGCCGTGTCTCGGAA	BB=BAA@@BABB?7A2>-@@@>@?AAB=@8@?9><@>:7>@>:7@@45+8
+427_26_331_F3	4	*	0	0	*	*	0	0	TCGCTCGCGCTAAGATACAAGGAAGCTCAACTTTTAGCGCGCATAGGCTG	=73:><A;=9?<>;/A;;:<=?276:<19;;A<7<<9<3:9:-.<<>.74
+427_26_583_F3	4	*	0	0	*	*	0	0	CACGCGTTATGGAGCTCGGCGAGGGGACTAGGAGCAGAGTCTGCTTAGAT	AAA@ABBBB?@B@?=B;>AA?=?@A@>7A@AA>>@==@?A=B==BB7:AA
+427_26_646_F3	4	*	0	0	*	*	0	0	AGAAACTCTGAGCCGGACCAAAATTAGGAGATCAAGAACCCCGGGAGGCC	@@AAA?A>??BB@@A?;A@=BB??:AA7=8AB:><=<==@B;:9:A:>?5
+427_26_857_F3	4	*	0	0	*	*	0	0	TTAGCCGTCCGCTGTATCAATCCAGTGTAGTCGTCGTAAACGTAACGTAC	>A?=>@@<><=<=><@?7<9@><?:@;@8:@@;6<8>>A9=1/A??5:@.
+427_27_1002_F3	4	*	0	0	*	*	0	0	GATGCCGATAATTACACACCCCCAAGTGCGAAGGCAAAGGATGGCTTCCC	>?<>B<A<=?<B;;9@A9>?@A:A=<A5<3=B:;:AA==0A>3<37A>=5
+427_27_160_F3	4	*	0	0	*	*	0	0	TTAAACGTATTCTAGTACCTAAAGGAAGCTGGGCTCACAACGTTTAAAAG	>>AA@@-@A?A<>A;@647A=<>9=?;:7@8;3>@2:5@<:7@?A99:?4
+427_27_231_F3	4	*	0	0	*	*	0	0	GGCGGGCAAGGGCTGGGGATGGAGACGACTACTTTCCAAAGTCGGCATGC	ABAA?AB=>>@B>@?@@6;B@A5;@@@=8=>;:<A?@.?;<@;8=>9<5<
+427_27_369_F3	4	*	0	0	*	*	0	0	CAATGCCCCTGAAATGGACGTACGCCTAACCGGAGCCGGCTGGGCTACGC	;3:7?@=34?A<3/@A?14<A8;4>7=31<98.0:<<54<77659?4.8<
+427_27_778_F3	4	*	0	0	*	*	0	0	GCAAATGCCGAAGAAACAGAGAGAGGGCACGGCAGGACACCACCTAGACG	AA:=6AB=;=>?;=:@>6=;>>:8=@@=;7A@><?A@?=<???;@?===7
+427_27_939_F3	4	*	0	0	*	*	0	0	AAGGAGGGACACAAAACCCCGGCTAATCAGAGAGCAAGGGGAGTCGTCGA	2:53=@:<@9:<?@??28>@<5:A<@>;02=6867A=<<@58->;:72/2
+427_28_1127_F3	4	*	0	0	*	*	0	0	GTCCGGGACCTCTTACCCAACACAAAGGCCGAGACCCGTTGCAACTGGCG	??BBBB?@BAB@BABA@?BBA>@BBAA=?>BB>?@A=:?@9@BA@78?B-
+427_28_593_F3	4	*	0	0	*	*	0	0	TGGCAGAATATTACCATCTAGAGAGAAAAGAGGGTTAGACGCAGGCTAGA	4B;?>@@==;A@=;;A?-;?@@:=?BB95><@<4AA<;>:?97<>@?<89
+427_28_739_F3	4	*	0	0	*	*	0	0	CAGCTCCCCGCGAAGCTCTCATTACCTCGGGGTGACTACTAAACGTTGAG	6B=@AA<;=3:B?@65@8@>5A:=>@A859<>99>4A</?:;?596A348
+427_28_798_F3	4	*	0	0	*	*	0	0	TACGTAAACCACCTCGCCCGCACTCCAAAACCGAGACCTTCCCACATCAG	B@@@@???<36?8:::<=?6-;89<;;:4994<.;5>A5:43>+>0+<11
+427_28_923_F3	4	*	0	0	*	*	0	0	CAGCCTTGATCCTACGCTGCGCTGCCGCGAGCGTGGACGATGCTCGAGCC	?B=A?B@>A8BB@>>@>B;6>>AA;A8=:2@:::8?8>66A4?<:?4?;;
+427_292_217_F3	0	chrX_part	14846	37	49M	*	0	0	GTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTT	]]]]]]]]]]]]]]]\]]]]]]]]]]]]]]]]]]]]]]]]]]]]\]]]]	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+427_29_521_F3	4	*	0	0	*	*	0	0	CTCTGACGTCCCATGAACTTCGCGAAGTCACCCCGGCACAAAACGATTGC	>B<@=AA===BB>?<>B:>>@;<6>=?>/;>B?<=3@0;?>><88=;<03
+427_29_911_F3	4	*	0	0	*	*	0	0	GTCCGCCAGTCCAGACTGGACAATTCGGACAACGGGCTGAGGCTAGGGAC	B?BA@BA@B@?AAB=?@ABB=@BBB@B>A<>@@BA<=?BA>?=@B<B<@=
+427_29_95_F3	4	*	0	0	*	*	0	0	AGACGAAGTGGTGATGGGTGTAAACGGCCCGGCGTAGAGCACGCTCGAGC	?8?@>A><<:9??5????;;>@@9=<7?8<==>4@-==7;/5>1;4;;24
+427_29_970_F3	4	*	0	0	*	*	0	0	GAGCTCGACGCGGGCGAACAAGTGAATGCCTCGAACAGACAGAGCGGCGA	A@78BAB:>=BB9;>BA89BAA88AAB-:=@@4<<A@2:>>>.,9>B-78
+427_29_978_F3	4	*	0	0	*	*	0	0	ACCCCAAATTTCCGCGCTTACAAACATCTGCGACAAAGATATGGTCCCGG	A?@BAB@?B?AA?B?@B@BA>ABB?A?9A@??=7@AB/A?<A?<@@@=@?
+427_30_1018_F3	4	*	0	0	*	*	0	0	CAGAAAGGCCCCTAAGGCACACACCCGCATGAGGCCAGGCTACCCCAAGC	@@@AABB@B?A@;4AAA<;A?A>4AAA98BAA:9A@B=3B;A;:A>A=,B
+427_30_1044_F3	4	*	0	0	*	*	0	0	CCCTTCGGAGGCGGACCAAGACAGCTAGGGAGGGAGAAAAAAGAAGAAAC	?BA@ABB=;AA><==AB>=@>A@=>=A?=A=A>9A7BABB@A3@A.<76+
+427_30_1053_F3	4	*	0	0	*	*	0	0	CGCCGTGCGCTTCTATCGTGGGACGCAAGTTCCGGATGATGACAATACGT	<?A=@@ABB>BB@?@;;8A@>@??@>=A<A=9?@?9=9@<.:<BB:9<==
+427_30_261_F3	4	*	0	0	*	*	0	0	AAGAGCGGCGGCCAAGAGGCTGCTATTGAAGCCTTGCCCGTTCACCACCC	A?>??A@@>?@@=@<@<??=A?>@>BA<>>>@7>?<??>>=<=<=>:;?@
+427_30_606_F3	4	*	0	0	*	*	0	0	AGTAGGAACCTTACACACGGGAGGCAATCCCTGGCGTGAGGCTCGAGGGA	>?@8=@@:<<@A86;A=88>@?8/-<??699A929>>667<9=59>881:
+427_30_752_F3	4	*	0	0	*	*	0	0	CGGCGGAGGCAGACGCACCATACTGCAACGGAGGAGGGCAAGATGGCGAT	@B@=?B?@>=>A.<>>;8;9@@<>;AA:;;??8:3@>:;8<=6=6:0624
+427_30_764_F3	4	*	0	0	*	*	0	0	TTGAGACCGAGGGCAGCGCTAGAAAAGCGTGTATTCACGGGGCGAAAGGT	BB?A@@=0>3?A:=8?;98??>7=<?@/<9:A3=:=;9=8<<8:?@<9;>
+427_30_773_F3	4	*	0	0	*	*	0	0	CGTTGCGCAAGAGAAACCGCAGCTACGGCACCGCCGTATACCTAATCCAA	<@BBB=BBB@=?@B?=A@@==@@@@=B??===@>>;>A=7A@@8<8<>>?
+427_30_959_F3	4	*	0	0	*	*	0	0	AGGGAGACATAGCCTGCACTCCCAACCAATTTGCCACGAAATGGTCATAT	>=@@?@=?;BA@>9BA=:=BAB=;:AA;9BB?88<==;??=?79;6677@
+427_30_983_F3	4	*	0	0	*	*	0	0	CGTCTGACTAGGACTGAGAACCTCACCCTGGGCTCTCTAGAGAGGCTCCG	>?@B?BA@A=BAB>@BAAB?B@AA=BB?@?B@A@9A:A<7B<B@>B<@@A
+427_31_153_F3	4	*	0	0	*	*	0	0	GACAAGGAACTGCCAGGCCGGAGCGGAAGACGTACCATCATCAGCGCGGG	?>=>9AA?@;@A?;9@@:;;>>6<;?@9<<<A@8<><=8@A=>1?9>:9=
+427_31_598_F3	4	*	0	0	*	*	0	0	GGCAGGGTCTGGCTAGCATCGGTTAAGGATCTGGGGGAAGAGAATCTACG	BBA?AB@?/-ABA=9A:1?9BA@@<8@>0<>?=<>@@=?::AA>@::99=
+427_71_906_F3	16	chrX_part	28077	25	49M	*	0	0	CTTTGAAGCAATTGCGAATGGGAGTTCACTCATGATTTGGCTCTCTGTT	[]XNU]\]WO\]]]]]\]YX]]]]]]]]]]]]]]]W]]]]]]]]]]]]]	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:14T34
+427_794_484_F3	4	*	0	0	*	*	0	0	GCTCATACGGACGAGACACCCGTTCCACGATTGAGGCCACCGGGGGGAAT	A@BAABBBA=ABBA=@@B?4<BAA4>A@81@B@26>A@+<>=?<;?BB:2
+428_1011_1047_F3	4	*	0	0	*	*	0	0	TCGCGCCGCCCTAAAGCCCAGAGTTAAGGGACCCTGAGGGGACGTCCAGC	BB?>?BA@<>?B>=?A?>8@AB@A?A@>;=>>??@>A?==@?=6@>7;5>
+428_1380_646_F3	16	chrX_part	3496	37	49M	*	0	0	ATAAAGAAGGTGGTTTTCAGGTCTATATTCAATGGCTCTGGTGTAATAG	]]]]]]VX][[]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:49
+428_1424_131_F3	4	*	0	0	*	*	0	0	CTCTATTAGCCCATTGTCAAGGCGACAGACACACAACAATCCGACACCAT	6B7?@BB>:>AB:@BBA>>8B8;:7><<>=9<6<+>8><<?@9>05<46=
+428_1495_1538_F3	0	chrX_part	26855	37	49M	*	0	0	GGATCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTG	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]\]]]]]]]]	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:2G46
+428_1562_623_F3	4	*	0	0	*	*	0	0	CATGTATTTGACGGATGGTCCAAGGACGATAACCAATAATCCAGGAAAAA	;@A@BABA?AA@A<B?@?==@BA=:?@?><?>?5:==A?4:>?32:=@?<
+428_1569_464_F3	0	chrX_part	26911	0	49M	*	0	0	GAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCT	&)]]]]]]\]]]]]]]]]]]]]]]LS]]YS]]]]Z]]]]X\]]]]]]]]	XT:A:R	CM:i:1	X0:i:2	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:47T1	XA:Z:chrX_part,+12244,49M,3;
+428_1573_204_F3	4	*	0	0	*	*	0	0	ACAAGTCATGTGACGCAATCACTTAAGGTGCAGGTGGTGAAGCGGAGATG	B=;=ABA9:AB@;=AA44>5?;==65=2;978?:;19?/@-1=<==3?:=
+428_1632_1017_F3	0	chrX_part	14942	37	49M	*	0	0	TTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTTTTCATG	]]]]]]]]]]]]]]]]]]Z\]]]YU]]]]]]]]RS]]]]]W]]T[TT]]	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:49
+428_1643_455_F3	4	*	0	0	*	*	0	0	TAGTCTAGGATTTCCCACACCACCGGCCAACCGGGGGTACAATGCTCGGC	A>>A>AA?;BBBAA>B@@?=AA@@<9>>@@??>A?<=<B@=75<A>;:<@
+428_1684_1168_F3	16	chrX_part	27017	37	49M	*	0	0	CTAACTGGTGTGAGATGGTATCTCATTGTGGTTTTGATTTGCATTTCTC	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+428_1691_159_F3	16	chrX_part	14618	37	49M	*	0	0	TTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGC	]TO]UY]]]]]]]]]]]]VT]]]]]]]]]]]]]]]]]]]]]]]]]]]+/	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:49
+428_1816_859_F3	0	chrX_part	14837	37	49M	*	0	0	AGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTT	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]\	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+428_1829_1041_F3	4	*	0	0	*	*	0	0	AATAGTGTCACATCGCGAAGGAGCCCGGATACAGAAAAACGTCGAATAAG	,??A@9AB>@5AA>A9A?=?:B=?:5A=;>8@;:89A>=92A96<4@>;9
+428_1841_222_F3	16	chrX_part	26855	37	49M	*	0	0	GGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATGGCCACACTG	]\Z]]YV]]]]]]]][S[]]]SQ]]]]]]]]\]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:39C9
+428_1971_118_F3	16	chrX_part	27350	25	49M	*	0	0	TGGCTTTTGTTGCCATTGCTTTTGGTGTTTTAGACATGAAGTCCTTGCC	XX]]]]]]][Y]]\]]\]]WX]]]\]]]]\\]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:7G41
+428_1978_162_F3	16	chrX_part	28066	25	49M	*	0	0	TATTTTATCCTCTTTGAAGCAATTGTGAATGGGAGTTCACTCATGATTT	]]]]]]]]SS]]]]\]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:8T40
+428_247_467_F3	4	*	0	0	*	*	0	0	CTACCCCGCGCGAGACCCATCACACGACGTGCAATCCGCGAACCACACCG	ABAABAAAB@AAAA?>>?AA:?@A:9=>A@4;?B@<>8B>.8?A>1:<@>
+428_385_1306_F3	0	chrX_part	27180	37	49M	*	0	0	TTTCTTGTAAATTTGTTTAAGTTTCTTGTAGATTCTGGATATTAGCCCT	]]]]]]]]]]]]]]YW]]]][]]]MN]]]]]]]]]]]]]]]]]][]]\Z	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:23C25
+428_435_1382_F3	0	chrX_part	14761	0	49M	*	0	0	ATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATG	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]\]]]]ZJ	XT:A:R	CM:i:1	X0:i:2	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:35C13	XA:Z:chrX_part,+26867,49M,2;
+428_589_1697_F3	4	*	0	0	*	*	0	0	CGAGTCTAGAAGAACGAAACGCGCCCCAGGCCGAAGTCTAAGGGGGGCCA	@1>B6<<;A?@?B></=B@@/>>B???5?:=<=?9:=12><:>>;:<577
+428_615_1095_F3	16	chrX_part	28737	37	49M	*	0	0	ATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTC	]]Y]]]WY]]]]]]MX]]]]]]]]S\]]]]]]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+428_628_321_F3	0	chrX_part	28192	37	49M	*	0	0	CTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACAATGGGGT	]]]]]]]]]]]]]]]]]]U]]Z[Y[]]]W\]QO\]\ZYPPVU]XY]\WU	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+428_666_413_F3	0	chrX_part	27425	37	49M	*	0	0	CTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAACGTTTAAGTC	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]\]]][]]]]]]]]]	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:40A8
+428_912_273_F3	4	*	0	0	*	*	0	0	TCCACCGCGAAACGGGCCCCGTCCAGAAAGAGAGCCCCGACTCCCCAGGG	BAABBBB@@BABA@BB@>??BB@A?@A=@<>@??<ABBA::@A@@@@9><
+429_1074_1497_F3	0	chrX_part	26923	0	49M	*	0	0	TAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACAT	]]]]]]]]]]]]VV]]]XZ]]]]]]]]]]]]]YZ]]]]]]]]\[]]][Y	XT:A:R	CM:i:1	X0:i:2	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:35T13	XA:Z:chrX_part,+12256,49M,3;
+429_1244_262_F3	16	chrX_part	27844	23	49M	*	0	0	TTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCAT	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:0	X0:i:1	X1:i:1	XM:i:1	XO:i:0	XG:i:0	MD:Z:49	XA:Z:chrX_part,+15141,49M,2;
+429_1264_776_F3	16	chrX_part	27356	37	49M	*	0	0	TGGTTGCCATTGCTTTTGGTGTTTTAGACATGAAGTCCTTGCCCATGCC	%!X\[]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]*	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:49
+429_1285_1614_F3	4	*	0	0	*	*	0	0	TGTAGTTGCTACCACAGCCTAACAACACACAGACAGCGGAACTGTTACCC	A@BB?ABBBBBBBABBBB?AABBA@<BB?A@B>6@=@@;BA@@>@;?B??
+429_1292_826_F3	4	*	0	0	*	*	0	0	CGGTGAGGCTCCCGTCAAAGGAATATCACTGCGGGCCGACCGATCACAGT	>A@A?AA>?BBB>@@;:?3>A?@??7@@;A=?<<<>=;@??<?9?7<A2A
+429_1304_326_F3	0	chrX_part	12249	0	49M	*	0	0	GTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTC	]]]]]]]]]]]]]]]]]]]]]]]]\]]]]]]]]]]]]]]]]]]]]]]]]	XT:A:R	CM:i:1	X0:i:2	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:39C9	XA:Z:chrX_part,+26916,49M,3;
+429_1398_1503_F3	0	chrX_part	27821	37	49M	*	0	0	TCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCAT	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]Y[]]]\]]]]X\]]\U]]]	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:49
+429_1427_1475_F3	16	chrX_part	27983	25	49M	*	0	0	TATCCTCTTTTATTTCATTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAG	]]]TOYT\]]]]]]]]]]]]]X]]]]]]]]]]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:16C32
+429_1568_890_F3	0	chrX_part	13190	25	49M	*	0	0	ATTCCCTTTGAAAACTGGCACAAGACAGGGATACCCTCTCTCACCACTC	]]]]]]]]]]]QT]]]PT]]]R]]]]MS]]]]]]]]QT]]]\]]]]QU]	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:32G16
+429_1819_792_F3	16	chrX_part	3467	37	49M	*	0	0	GTACGAAGAAAACAAAGAGCTCGGTTACCATAAAGAAGGTGGTTTTCAG	[UMBRWX]UW]]]]]]]]]]]]]TU]]]]]]]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+429_1854_1258_F3	16	chrX_part	27411	25	49M	*	0	0	CTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGT	]]]][[]Z]]]]]]]]]]]]]]]]]Z]]]]]]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:13T35
+429_1876_126_F3	16	chrX_part	27366	37	49M	*	0	0	TGCTTTTGGTGTTTTAGACATGAAGTCCTTGCCCATGCCTATGTCCTGA	W]Z]]]]\]]]]]]]]]]]]]]]]]]]]]]]][]]]]]]]]]]]]]]]]	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:49
+429_1899_322_F3	0	chrX_part	27853	37	49M	*	0	0	TCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTAT	]]]]]]]]]]]]]]\]]][Z]]]]Z\]]]]]]\\VZ]]]]]]SW]]]Z\	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:48C0
+429_1905_281_F3	16	chrX_part	26882	37	49M	*	0	0	TCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTAC	]]]][X]]]]]]]]]]]]]YX]]]X]]]]]]]]]Y]]]]]]]]]]]]]\	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:29G19
+429_1921_1124_F3	16	chrX_part	26708	0	49M	*	0	0	TTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTG	]]]]]]]]\Y]]]]]]]]]]\]]][]]]]]]]]]]]]]]]]]]]]]]]]	XT:A:R	CM:i:0	X0:i:2	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49	XA:Z:chrX_part,-14602,49M,1;
+429_1925_1090_F3	0	chrX_part	28003	25	49M	*	0	0	AGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAA	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:45A3
+429_320_1424_F3	4	*	0	0	*	*	0	0	ATTGAGCGGGCGAACTGCGAGCACTGATTGCGTGATAGAGGGTAAACAAT	BB?9=>B<=><BA<??@=;=:=A5=?@A>==AA48?72:<>>=??@:33=
+429_498_1544_F3	0	chrX_part	12236	0	49M	*	0	0	GACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAA	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	XT:A:R	CM:i:1	X0:i:2	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:1T47	XA:Z:chrX_part,+26903,49M,2;
+429_517_617_F3	0	chrX_part	27136	37	49M	*	0	0	CTGTTCATGTCCTTTGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCT	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:49
+429_525_1146_F3	16	chrX_part	14836	37	49M	*	0	0	CAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGT	TTXVUPQYSVYW]]]TT]]]OT]]]]]]]]]]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+429_566_873_F3	16	chrX_part	28192	37	49M	*	0	0	CTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACAATGGGGT	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+429_627_1289_F3	4	*	0	0	*	*	0	0	TTAGCGCCTACTGAAACTGCAGTGTCACATCGCGAAGGAGCCCGGATACA	BBBBBBA?BBBB<BBB@@A@B@?=A@>>@AA??>?>B>:=A>===??<<B
+429_641_991_F3	0	chrX_part	27721	37	49M	*	0	0	ACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAG	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]][	XT:A:U	CM:i:2	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:35C0A12
+429_706_923_F3	0	chrX_part	14842	37	49M	*	0	0	AAAAGTGTTCCTATTTCTCCACCTCCTCTCCAGCACCTGTTGTTTCCTG	LY]]]\]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]Y]]]]	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:22A26
+429_820_1223_F3	16	chrX_part	27415	25	49M	*	0	0	ATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAA	[VUZ]]]]]]]]]]TT]]]]]U]]RZ]]]]]]]]]Y]]]]]]]]]]]]]	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:9T39
+429_880_338_F3	4	*	0	0	*	*	0	0	GATGTGAACCCGGAATTCCAACGTCACTGCGGGGATTCGTTTAACCCAGG	A@A?BBAA@@?B>A@@A=?B?A8?;=A=>@@A?>?@A8;AAA=A<?<;>=
+429_899_643_F3	4	*	0	0	*	*	0	0	CACAAAATTCACAAATGACGGTACTCAATAGCGGAATATGACTGGACGAT	?AB@6>?AB<=@AA@>@<A>=B@=>3@?@><A@@=>>?A=>;B8=@@6<<
+430_1055_244_F3	4	*	0	0	*	*	0	0	CGATGTTACCCCGCGCGAGACCCATCACACGACGTGCAATCCGCGAACCA	?BBBBBBBBBBBBBABB@BB@=<AB<>>B>9?<AB;:>BB@@<B?>3A@@
+430_1080_625_F3	4	*	0	0	*	*	0	0	AGAACTAGGCCTGACACTAGCCAGCCGGGCGTCACTGCAAGGAAACTGCC	B=BBBBBBBB>BBBB@?BA@B?@AB>A@AA>A7A@B?+@7A>A?<B-=>@
+430_1105_227_F3	16	chrX_part	27741	37	49M	*	0	0	TTTGAAGTCAGGTAGCGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGG	]]]]]]]][\]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:16A32
+430_1195_1598_F3	4	*	0	0	*	*	0	0	CCTTTTTCAACAAGAGTATTTAATGCTCTGCTGTTTAAGGCCCCTCTCCC	@B@BBBBBBABBB@BBBBBBB@AA><6.=>@=5<BA4A5>@8A7B>48:7
+430_1270_1392_F3	0	chrX_part	27268	37	49M	*	0	0	GTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGC	]]]]]]]]]]]]]]]]]]]]]]XW]]]SU]]]]]]]]]]]]]QT]]]Q[	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:49
+430_1280_786_F3	0	chrX_part	28246	37	49M	*	0	0	AGATATACAATCATGTCATCTGCAAACAGGGACAATTTGACTTCATCTT	]]]]]]]]]]]]]]]]]]]]]]]SX]]]]]]]][]]]\RW]]]SZ]]]]	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:44C4
+430_1307_10_F3	0	chrX_part	26911	0	49M	*	0	0	GAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCT	!"]]]]]]]]]]]]]]]]]]]]]]]]]]ZR]]]]]]]]]X[]]]]]]]]	XT:A:R	CM:i:1	X0:i:2	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:47T1	XA:Z:chrX_part,+12244,49M,3;
+430_131_637_F3	4	*	0	0	*	*	0	0	ACCAGAGTTAAGGGACCCTGATTGGACGTCCAGCCACCAAGAGCGCGAAA	8??<>>@@8B68>?9=A8?=BB<AAA>0@;@<<A<>A9B@>A8=:@=A?;
+430_1403_722_F3	0	chrX_part	12260	0	49M	*	0	0	TTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTC	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	XT:A:R	CM:i:1	X0:i:3	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:28C20	XA:Z:chrX_part,+14821,49M,2;chrX_part,+26927,49M,2;
+430_1406_34_F3	0	chrX_part	26518	37	49M	*	0	0	CCTGTGTCCACGTGTTCTCATTGTTCAATTCCCACCTATGAGTGAGAAC	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:10T38
+430_1531_1322_F3	0	chrX_part	26775	25	49M	*	0	0	CAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAATC	]WP]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]\\	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:46G2
+430_1586_641_F3	0	chrX_part	28277	25	49M	*	0	0	ACAATTTGACTTCCTCTTTTCCTAATTGAATGCCCTTTATTTCCTTCTC	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]Y	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:31A17
+430_1684_261_F3	16	chrX_part	27257	25	49M	*	0	0	TCTCCCATTCTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGC	QS]TU]]]YXVX]XJQX]]]][]YS]]]]\]]]\]]]]\]]]]]]]]],	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:9T39
+430_1726_1548_F3	4	*	0	0	*	*	0	0	TTTTCGACGACGAAGCTGCAAAAAGACATAGGCCCGAGGAAGCGCTACAC	;BBB=9@BAA3AA@>4=A>?<A@@=8<?;@8@@>>2=>8A69>5>4<==<
+430_1779_172_F3	0	chrX_part	25672	37	49M	*	0	0	CTGGAAACCATCATTCTCAGCAAACTATCGCAAGGACAAAAAACCAAAC	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]][[]]]]]	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+430_179_99_F3	0	chrX_part	14832	37	49M	*	0	0	CCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTG	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+430_1871_988_F3	0	chrX_part	14560	37	49M	*	0	0	AAGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCC	]]]]]]]]]]]]]]]]]]]]]]]TO]]]]\]]][T]]]]]]]]]][]]]	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:1T47
+430_1994_1381_F3	4	*	0	0	*	*	0	0	GACTCGGTCTCAGATCCAGGAGACTAACCAACCTTGAGGGAAATTAAGAG	@BBBABBAB==ABB@>A@A?A@B?A>B@=?@AAAA=AA@8;ABBBAA?@8
+430_392_28_F3	0	chrX_part	12248	0	49M	*	0	0	GGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTT	]]]]]]]]]]]]]]]]]]]]]]]]][]]]]]]\]]]]]]]]]]]]]]]]	XT:A:R	CM:i:1	X0:i:2	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:40C8	XA:Z:chrX_part,+26915,49M,2;
+430_491_367_F3	0	chrX_part	27259	37	49M	*	0	0	TCCCATTTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTG	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]ZX]]]UU][]]]]]ZHR]	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+430_607_895_F3	0	chrX_part	26847	23	49M	*	0	0	GGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCG	*]]]]]]]]]]]]]]]]]\]]]]]]]]ZZ]]]]\]]]]]]]]]Z[]]]]	XT:A:U	CM:i:0	X0:i:1	X1:i:1	XM:i:1	XO:i:0	XG:i:0	MD:Z:49	XA:Z:chrX_part,+14741,49M,2;
+430_688_525_F3	16	chrX_part	27375	37	45M1D4M	*	0	0	TGTTTTAGACATGAAGTCCTTGCCCATGCCTATGTCCTGAATGGTATGT	WW]]]]]Z]]]]]]]]]]]]\]]]]]]]]]]]]]]]]]]]]]]]]]"!]	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:1	XO:i:1	XG:i:1	MD:Z:45^A4
+430_691_1191_F3	0	chrX_part	26852	0	49M	*	0	0	GCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACA	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	XT:A:R	CM:i:0	X0:i:2	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49	XA:Z:chrX_part,+14746,49M,1;
+430_693_248_F3	0	chrX_part	14829	37	49M	*	0	0	CCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCAC	-]]]]]]]]]]]]]]]Z]]]]]]][]]]]]]]]]]]]]]]]]]]]]]]\	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+430_78_1025_F3	0	chrX_part	14935	37	49M	*	0	0	TTGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTT	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]\]]]]]]]]]]Z]]]]	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+430_821_1672_F3	4	*	0	0	*	*	0	0	ATCGGCTGGCGCCAAGAATGTATTTGACGGATGGTCCATCGACGGCAACC	A@?AAAAAA@=?:BA>B@>ABA?@A?B>:=@?<<:@>B=74@B;=><@65
+430_874_1668_F3	4	*	0	0	*	*	0	0	GAGAATTAAGGAAGGGAGCTAGCGTACTAAGCATACGGACGAGACACCCG	A@AA>A@AB=@BAA@A@>@?B@=@?B@:A@?>:>A>=69@=@8A@@:/9?
+430_89_1672_F3	4	*	0	0	*	*	0	0	GGCGGAGATGTTACCCCGCGCGAGACCCATCACACGACGTGCAATCCGCG	B?B?9@B@>=A@B=>A>?A@B<@==?=?@;>7A?>53A;>32@BAB>6?;
+430_900_444_F3	0	chrX_part	26504	37	49M	*	0	0	GTGATGTTCCCCTTCCTGTGTCCATGTGTTCTCATTGTTCAATTCCCAC	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:11T37
+431_1029_654_F3	0	chrX_part	27939	37	49M	*	0	0	GATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTATCC	]]]]]]]]]]]]]]]]]]]]VK]]]]]]]]]]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:17G31
+431_274_859_F3	16	chrX_part	14611	37	49M	*	0	0	TCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGA	]]]]XT]]]]]T\]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:49
+431_362_522_F3	4	*	0	0	*	*	0	0	CAGCCATAACGCGAGAAAGAAAGAGTATACGATTCAAGAATTAAGAGAGG	?B@?>ABBAA>B?A?@A@A@BA=A<8@>A?2@A@>AA?A?@<@A::779>
+431_427_471_F3	0	chrX_part	28034	37	49M	*	0	0	CCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGA	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]WT]]]TR]]]SU]]]	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:14A34
+431_436_304_F3	0	chrX_part	26555	37	49M	*	0	0	ATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTAC	]]]]]]]]]]]]]]]]]]]U]]]]V[]]]]]]]]X[]]]T]]]]]][]\	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:11C37
+431_44_655_F3	4	*	0	0	*	*	0	0	GCTATTAGCCCATTGTCAAGGCGACAGACACACAACAATCCGACACCATC	>-<=>@@4:=>@?A:>=9=::::=:5<:<66=7865<9;<59=13:+<;;
+431_50_371_F3	4	*	0	0	*	*	0	0	CGGCCCCGTCCAGAAAGAGAGCCCCGACTCCCCAGGGCTACCAGCATAGA	=AA@@AAAABBBAB@=@9@A@A@A?>B<??AA>@;?@?@>B?6=B7@8A@
+431_510_914_F3	16	chrX_part	1438	37	49M	*	0	0	TCCTTCTATAGAGTCTAGTTTGTGACCATATTTCTCATTCCAGAGGAAA	]]Z]V[Z]]]]]]WY]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+431_524_1355_F3	16	chrX_part	28191	37	49M	*	0	0	GCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACAATGGGG	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+431_753_1184_F3	0	chrX_part	27127	37	49M	*	0	0	GAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTG	Z]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:23T25
+431_933_606_F3	16	chrX_part	27360	37	49M	*	0	0	TGCCATTGCTTTTGGTGTTTTAGACATGAAGTCCTTGCCCATGCCTATG	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+@PG	ID:bwa	PN:bwa	VN:0.5.9-r16
+@SQ	SN:chrX_part	LN:37500
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/bwa_wrapper_out5.sam	Fri Sep 28 13:53:48 2012 -0400
@@ -0,0 +1,420 @@
+853_1026_2018	141	*	0	0	*	*	0	0	GGAGCTATTGCTCAGAGGCCATGTGGTGTCCGTTGGCGTTTGTGCTGGTG	9<#64>;#659;#%61;'11&<+7#9=-3(3:/3342&)361&&(34#%,
+853_1026_2018	77	*	0	0	*	*	0	0	CGGTCTCCGTACGACGATACGCTTTACGGTATAAGCCAACTGGAGTGGGT	6<7=7;6,7=(6928:#;#.8#$'7###4(%/#$.'')0'3$(&)&(2**
+853_1027_1303	137	chrM	3893	37	49M	=	3893	0	GGGCCCATACCCCGAAAATGTTGGATTACACCCTTCCCGTACTAATAAA	]]]]]]]]]]]]]]]]]]]TS][QV]]][Z\]YXTWWYYQXXYML[TK'	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:49
+853_1027_1303	69	chrM	3893	0	*	=	3893	0	GAATTATTCTTTTTCGGCTTACTATACACTTTACTAAAATCCTTAAATTA	*,10,,;0##3##&#%&#&(%##&##$&#%####%%&$#&#####$##$$
+853_1055_941	141	*	0	0	*	*	0	0	TCTTGAGGTTGCGTAATTCACGGTGAAATAAGGAATAGTATCGTATCGAA	5&1)>3175@6//;@:3/)=5&$#&&&&&&&%&$'&&%&)&&$&&&&/&)
+853_1055_941	77	*	0	0	*	*	0	0	TCGTTATGGAATTATCGATTCCGCTAAGCACTCGGACCCCAAACGTACCT	AA@<@@AA=?@AA?@A@@@@?@A8>>@A><>77=>>=>=>>?=A:<1>8@
+853_1056_37	117	chrM	1193	0	*	=	1193	0	AAAGCAAAGTGGGGGGTAGAGAAAGGGGGGTTGGGGCACTAGTCGATAGC	(&47&&,&,&-*):164,5511;9;6/5;:0':15&,;;24'06/<6:):
+853_1056_37	153	chrM	1193	25	49M	=	1193	0	GGAGATAGAAATTTTAACTTGGCGCTATAGAGAAAGTACCGTAAGGGAA	!!(BOW05\WSGGRNOPLLNRX]]XY]]]]OP]XVVW]]]]]]]XU\]]	XT:A:U	CM:i:0	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:49
+853_1075_559	141	*	0	0	*	*	0	0	TGAGCGCCACAGAGGGGAGTGAAACCTCGCTTCTGTATATTAGGGTAGGG	#&5*&&(1&%&)2$,=(5+;9(0$2:&)%%$)1#:(#)2*,(',)#(,,#
+853_1075_559	77	*	0	0	*	*	0	0	TCCACATGACCTCTACAACAGCCTAAAAGTATCAAGCGGCCCAGGTCAAA	86*0.#&1*,4#2'&/'%1)152+02'9#))&)%&*&'%+*0#'#&-.$0
+853_1076_58	137	chrM	2475	37	49M	=	2475	0	CAACCGCTATTAAGGGTTCGTTTGTTCAACGATTAAAGTCTTACGTGAT	]]\\\]]IIUW]JJ\\]YYYZ]\\]][USZZZQOWX]YTRQ\OIPQWNE	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:49
+853_1076_58	69	chrM	2475	0	*	=	2475	0	ACAGGTCTAAGCCCGTAAAGTCGATCACGGACGGGTCGGCTTATATAGGC	78=89::;::8<:3<<;<9<8948;73:<<59::8:96:=(67881599,
+853_1091_1124	141	*	0	0	*	*	0	0	GGAAAGTCAAAGGAGAGAATCGGCCCTGGAGGTGGCGTAAGGCGGTGTCC	=?>@A??>@<<>9;9@>5;<A;??>A?:<>?;5:9;674;<518:5$=09
+853_1091_1124	77	*	0	0	*	*	0	0	TTGCAGTCCTGTGCGGGGCGGCGGATTCGCTGCCTGTGCTGGGGGGTGGG	6;;;<===<@9?4:A<>9=>8;=<6=>/5578))2.&''(&%$$-+./$,
+853_1092_230	117	chrM	197	0	*	=	197	0	GATACTTCGTGCCTGGATTGTGCCTTTCTTTTCTTGGATCTTTTCGTCTC	0)/8'/785%+59539,67%1974*)/;5+:2=7(9-=2,//;3&3,>)1
+853_1092_230	153	chrM	197	37	49M	=	197	0	ACAAAGTAGCTCATAACACCTTGCTCAGCCACACCCCCACGGGACACAG	JX]YUTTOU]OO[]]]URUY[XY]Y[]][]]]]][[Z]]]]]]]]]]]]	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:1G47
+853_1094_1720	137	chrM	7802	37	49M	=	7802	0	ATATGCCACAGTTGGATACATCAACATGATTTATTAATATCGTCTCAAT	X[]]]]VRSYXRY\]]]]\]XPRTTYXUSRUVYILXOSSMOQSLTSNXU	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:49
+853_1094_1720	69	chrM	7802	0	*	=	7802	0	TCTAAGTAAGCCTAGCGTCCCTCTATGCTGTAGTGACCAGAGAGATTGTC	730,<8814/7479>7<7/1=;/:)=2;;,<<<;55=;7<==8/,:;&7'
+853_1094_215	141	*	0	0	*	*	0	0	GCCTTTCTCCCTCTCCTCTGGTTTCGCCTTGGAACAAGCGAAGAACAGGC	4)&/-,1&$77/,.114('(1+)%'*0#,3$$#,#'&(#$$)#,$%3,#+
+853_1094_215	77	*	0	0	*	*	0	0	GCGAACAGGGACGCAGCGGTGAACGATTTTCGCCTCCCTCACCGACCCCA	8;8.,:/*2./:*#3.2+2'(82&)$&266#4)(2/'*%1%$4'1*-:.3
+853_112_119	141	*	0	0	*	*	0	0	TCCCGGGACAACGGAATTAACAACCCCCGGGTGGAATCGGGTGGGAGGCG	))&)994&,/1(+-+.-('(02)145,.&42,#&).,&(-0.%,',%:(0
+853_112_119	77	*	0	0	*	*	0	0	CCTAGGATAATACGCGGACAGGGGAGCTCCGGGGGGAGGGGACGGGGCGG	7)&8327,(41&&),%1/)%+242(1,)')&15,)&05#$50,$$87&.$
+853_112_253	137	chrM	1041	37	49M	=	1041	0	ATAACCAAAGTGTAGCTTAAACAAAGCATCCAGCTTACACCTAGAAGAT	WTVVUWTQYWRMT][YTWNITY]ZSW]]]RU\Z\]]]YTWVSTWX\ZM>	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:49
+853_112_253	69	chrM	1041	0	*	=	1041	0	GAACGCTTATGGGGTCCGCTAGCTAACGCCGCCTGGCCAATAACTATAGT	;9;97857&:;6;&983;4=83/,::2=,8;7(&<;/8+275(/9-1&(;
+853_1138_1582	181	chrM	7649	0	*	=	7649	0	TCAGGAGCAATGGGTCATAGCGTTGGTGTTGTTGGAATCAGTGGGAACGC	86<8;?5:99>6<>/@=9=8==7=@=<7;<><:?=@?;>@<9<=?@@@=?
+853_1138_1582	89	chrM	7649	37	49M	=	7649	0	GATCAAACCACAGCTTTATACCAATTGTTCTTGAACTAGTTCCACTGAA	\]UPSS\RLW\]RPYY][Y]\]]ZY\\[Y]]]]]\]]]SS]ZVW]]][\	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:28C20
+853_1139_914	141	*	0	0	*	*	0	0	GAACTAAAGCCAACGCGGCAAACCTTGTGCAGCCACCGCAAAACCACACC	)4#%&+2%$,/$##*000$&.2(,'',,#'&#%%)%%#+,'-&$,$*&)*
+853_1139_914	77	*	0	0	*	*	0	0	CTATGAATCAATTTGAATAGTCGTCTTAAAATATGGCACCAAAAGCGATC	<(),)&6:$&>'8)('$&5)$*'#+'1#.6,)#$1&('',&6&+',&&+/
+853_1144_824	141	*	0	0	*	*	0	0	ACCGCAACATGCTGAATATGACCTAGCAAACTACGAACAATCTGAACCAC	'8'..1/#3)()&$%'/(&&#((('$1(.#+))',$)%(#(+),,,#$.)
+853_1144_824	77	*	0	0	*	*	0	0	GCTCGCTCTCAAAGGGGAGAGGGAAAGAGCTGCTGGGCTGGGGGACCGTT	'(')%&,:4'.+4.:4(/028:9;:;01:;/6-(8344)/#++1),&9)&
+853_1145_305	117	chrM	13509	0	*	=	13509	0	GGCCAGATGTGGGCGAGCATTCCTGTCAGTACTCAAAGGTGTAAGACATC	<=;>=883>6=>;=:8==;=?>;=<==<>><=>=:9;;<=?>><>:<=?=
+853_1145_305	153	chrM	13509	25	49M	=	13509	0	TAATTTCCACCCAAAAAGGCCAAATCAAATTATATTTCCTCTCATTCCT	SY]#)]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:1	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:19A29
+853_1148_1437	141	*	0	0	*	*	0	0	TAGCGGGGCGTAAGAAAGTAGAGTTGCTGGAAGATACGGGAAAAGAAGAG	59)&&;')&&4,1)&/;&(-)1&/(6/,0,1<<,:<5(748':;9==/7<
+853_1148_1437	77	*	0	0	*	*	0	0	TTTTCCAGGTGGCGTGTCCTTAGCAGGCACTGTGATGCTCCTTGTTTAGA	3875((77'%//28,(884:9/(;$59(03%%(5$'%+)$)&-.7513(4
+853_1148_420	181	chrM	5650	0	*	=	5650	0	TGACCCTCGGGCCAGGCGACCTATATGTCCGTGCATGTCACCTAGCGCAG	=<:5;<1:,:=8;==?9;><>><3@><;@>@==A@>?:?@?=<A@=@>>?
+853_1148_420	89	chrM	5650	37	49M	=	5650	0	ATAAACAACATAAGCTTCTGATTACTTCCCCCATCATTCCTACTTCTTC	UVVVFA<JWQXSU\RPSWOJP09YPT]]XSZ]]]JO\]]XX]]]UUZ\#	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:49
+853_1149_1929	137	chrM	8987	37	49M	=	8987	0	TGCTGACCACCCACAGGTATCCACCCCTTAAACCCCCTAGAAGTCCCCT	]]]]]]]]]]]]]]]]]]]]]]]]]]]]VY]]Z]]]ZOTJJYTNV]]TO	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_1149_1929	69	chrM	8987	0	*	=	8987	0	CTAGTACCACCATTGTAGTAACGAGGGCCGTATTTAGGAGGGGCGCAAGG	><:<=98>;;>=<>><@@==>=A=<<;><;>:><>9<?<:><<<;>;<><
+853_1149_239	141	*	0	0	*	*	0	0	TCCACTCGGCATCTCTTGCGACCGCTTGAGGGGTCTAGAAAAGCCCTGGG	$$+,#2#',+*%0'',#$*4(8#'0$5&#+0/4+*0+5%&(2)#&3/('+
+853_1149_239	77	*	0	0	*	*	0	0	CTGACCGCTATAGCGTGCGGAACAGGGGGGCCCTCTTCAAGCGGGGAGGG	3<51,*1*)88&%:1%+)%8'$//0.15*4';195/&//'9;(&38)7&-
+853_1231_1371	141	*	0	0	*	*	0	0	CGCAACGTTCGTTACCCCTGTGTTTATACCTGATTTGAATTTAATCGAGG	#:2+%%-,#,-/''''#&**+.#%&,*)#*#1$$&+%$%'%&3$'/$'(/
+853_1231_1371	77	*	0	0	*	*	0	0	ATATCTCCTTCCATTTCTGCCTGCGCCTATGTCCTTTTAGGGGTGTTTGC	,/0,.#'#$954),&#-',;.*##*(*.'82#$#2*$*#(%%&###,'#+
+853_1231_1635	181	chrM	3568	0	*	=	3568	0	CGCATGTCAATCTGGTCCTTCATGCAAAATCTTGACTGAATTAATAAAAG	37):115'<654068;15:98:,67:74<9967;=<65@9:9;?;<;=><
+853_1231_1635	89	chrM	3568	37	49M	=	3568	0	AACATGTTCCTTCCTATGAATCCGAGCATCCTACCCACGATTCCGATAT	YWRUYRTQEFQZ\WY][SUZZYX[]]TQ\WY]VV[]]ZW[]\OR]]]]]	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_1232_516	117	chrM	1292	0	*	=	1292	0	GTTGGGGGGTTGAGGAAGAGGGGGGTTGGGGGGTTGAGAAAAAGGGGGGG	4),%/-61&)0/'&&&4&&&,4/&-*5)&)/5.&&)+(&'*(,&'))685
+853_1232_516	153	chrM	1292	37	49M	=	1292	0	CTTTTGCATAATGATTTAACTAGAATAAACTTAGCAAAGAGAACTTAAG	!8[04XW]]ZZX]][XV]ZW]]]]]]\]]Z]]]]]]Y]]]\V[]]]]]]	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:49
+853_1232_940	141	*	0	0	*	*	0	0	GTTTTCCTGTGCCCGAACTCTTGGGGATTATTCGCCCCGAACGGTTCGTA	//&)3=65://7&/,1@15,)),33=1,<),,3(3?))//,),)6,39)'
+853_1232_940	77	*	0	0	*	*	0	0	TAGGGCTAAGTGTCGTGGCTGGCCCCCAGCCAAAACTTTCGCTTCTACCC	>175()<>>1&','95'/A&3,/?315@,&/',,,&&5,3/&1)&1'1<'
+853_1236_169	133	chrM	3979	0	*	=	3979	0	GCCTCCAGCTTATATACTCGAGGAGGGATATATTGAACATAGGCTGGTTG	8>9<:6<,.&99864<;>2);=52,:<59/<67<*;<:&+9:6&2<<<:)
+853_1236_169	73	chrM	3979	25	49M	=	3979	0	CTAGGAACTATAATCGTTATAATAAGCTCACACTGACTAATAATCTGAA	]]]JJRQNV]]WUOOYKR][$"!!SSXWIKTXXW[TNRGL]95KADHGM	XT:A:U	CM:i:0	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:49
+853_1237_10	141	*	0	0	*	*	0	0	TAGCATGCAGACGAGACGCTCCATTTACGGTCGAGAAGTTTAGGTAAGTT	6/<779>86=-4886:>:37==:1;729=2</===6:;,6/;66)((&14
+853_1237_10	77	*	0	0	*	*	0	0	AACAGATAATACGGCCTGCTTTGAGGGCTAACTAAAATGGGTCAGCAAAC	(,,;/)&5/()&=)3(&;<:3)=3=)/=&=-.8,9;<=5;,&141<,;/<
+853_1242_1158	133	chrM	2264	0	*	=	2264	0	GCCTTTCGAAGAGGGCCAGCGTCTACCAGACTAGCTTCCCTAGGAACAGC	=@<=;@@<>==A>>@>=>@=A:>@>???=&;)19(,,&+%+&(&3'3&,&
+853_1242_1158	73	chrM	2264	37	49M	=	2264	0	CAATTTCGGTTGGGGTGACCTCGGAGAACAAAACAACCTCCGAGTGATT	][X]]]]]]]]]]X]]]\]]]]]]]]]]]]]]]]]]]]]]\OTRACKW]	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_1243_871	141	*	0	0	*	*	0	0	TCTGAGACGGCAAGAGGTGAATCACAGATGGGCGTAAACCATTAACTTGC	1&?()&,1>>,(=&:88>/>7=1:77=118:75/988:57283/&))'**
+853_1243_871	77	*	0	0	*	*	0	0	CTGCGGGTAACGGGATGGAGAACGATATTTGATGAAGGTGGACCAACCCG	1),)*=3/4=,9<?,%46//./+1,&1/1,)<)8&,/7(>79,);668);
+853_1265_969	141	*	0	0	*	*	0	0	AGACTCGGACGGCCGAGGTTACCCCCTTGTTCCCCGGGCGAGTCTACCCC	&82,4,54'),%&)'0('.9.$9',;1(#%88)*#8&(,%19,#,871*#
+853_1265_969	77	*	0	0	*	*	0	0	CGGCTGGGGGGGCGTGATGCAACGTTAAAGGGAGGCTCTTGTCAAGAGAA	$<)'(')1.8:)()8(,&<//55,'&3,))'846164.001-/+381/72
+853_1266_828	113	chrM	105	25	49M	=	1042	937	AATAAAATTACACATGCAAGTATCCGCACCCCAGTGAGAATGCCCTCTA	/3[X]KFLS]]]]]]]]]]][Z]]]]]]]]]]]]]][]]]]]]]]]]]]	XT:A:U	CM:i:1	SM:i:25	AM:i:25	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:4G44
+853_1266_828	177	chrM	1042	37	49M	=	105	-937	TAACCAAAGTGTAGCTTAAACAAAGCATCCAGCTTACACCTAGAAGATT	\Y]\]]]]]][]]WY]]]]]]]]]][[]]]]]]Y]]]]]W]][T]]]]]	XT:A:U	CM:i:0	SM:i:37	AM:i:25	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_1267_170	141	*	0	0	*	*	0	0	GGAGTGGAGGTGGTCGCCCACCAAAAGGGCCAATTCCGTCGCCATCGCCT	&%%#+,4,##,,8.,%/#'*#72&-,.#*2123-&,4$2#,2(.(,,',#
+853_1267_170	77	*	0	0	*	*	0	0	TGAAATCGGGTTTATGCCTATACCGAGACCGGGGACCAACTAGGGACGGG	30:65905%/#52:2&3(7,532).4;,,+&3$+-(2)50*&0%'&1(1'
+853_1277_1774	133	chrM	1180	0	*	=	1180	0	TCCCTTGACAACACGAATATAGCCAATTCTGCACTATCCTAAACATCACC	AA?=??>;<>>@;>A@>:?<,3%&1,,(89'92+4&0)-5+&1,/15%/,
+853_1277_1774	73	chrM	1180	37	49M	=	1180	0	CCATTAAAGTATAGGAGATAGAAATTTTAACTTGGCGCTATAGAGAAAG	]]]]]]]]]]]]]]]]]]]]]]TQXY]]XQZ]]][\\]ZVY]]YWX]]O	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_1278_1160	141	*	0	0	*	*	0	0	GTAAATCCGACCCCTAAAGAGCCAAGAACCCTAACCAAGGGTCAAAAGAA	;AA==A?:A>?A<?;AA=;79?8><7@<:::8<=97=@9<953=A<8,>6
+853_1278_1160	77	*	0	0	*	*	0	0	AAGAGCAATGGGAATGATCATGCCGCTGCGTAATGGAATGGAGTGGAGGG	A=<<@AA?>@@@?;?>:>A?>?AAA@7<<,,&//1(+)&9+&&&85(1&9
+853_1280_1640	141	*	0	0	*	*	0	0	GTTTCACCCCCGTCGATACATACTAAGACCTAACGTGCCCGAACAAAACG	8>*2#8+#%#3/##&=:#$.=2#+1<6&(%@1#($>)#'#8(&$+=&&$'
+853_1280_1640	77	*	0	0	*	*	0	0	TGGTAAGACTCCTCCTTTCGGCCCCCAACCCCCCCCCCAACCGAGCTGCC	A;?<;<@<<>>A=44:??:<>:=74<:>48;=583==9/8=9:228122(
+853_1280_1971	141	*	0	0	*	*	0	0	ATTTCCAAAGGTTCCTTGAGGAGAAGTGTAAACATTCTCAAGTCCACCAA	))(,8.)1)+/&',)*76&85:4'5$$'#2/&(/#.%#&4.'***-+'37
+853_1280_1971	77	*	0	0	*	*	0	0	TATTTGGTCAGGGGCGAGGGCGGCGGCTTCAATCTTGGGGCAGTGGGTTG	)9177)6,3)):16&'/,1:6<()?))()(>5><(1=<?1.&)>/6&(1,
+853_1280_287	133	chrM	8561	0	*	=	8561	0	GATCGTTCGCGAGCATCTGGCTTTCATGTATCTGAGGCAGCGCAGAGTGC	>?A??>A>@A?>@><>?><@>@?<@=@8@;@:>;<>/=6<8193@86,/)
+853_1280_287	73	chrM	8561	37	49M	=	8561	0	AACTATCCTCGAATTCGCAGTAGCCATAATCCAAGCCTACGTATTCACT	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]Y]]\]	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:24T24
+853_1281_1171	117	chrM	4957	0	*	=	4957	0	TTCCTGATGAGGCAGCCTGGATGTATACTTGTGTGTACCACCTGATTGCT	'+)&%(%:2&'*151;3:<49>:=<:9;>><<?<=:/=A=?:<A;?<:@<
+853_1281_1171	153	chrM	4957	37	37M1D12M	=	4957	0	ATACTATCAATTCTGGACTAGGAATTTAGGTTAACATCCAGACCAAGAG	FSREOZRIHKRVVZ]WLR]]\YWZTW]]]YRZ]]]]\X]]VVY]]]]]]	XT:A:U	CM:i:2	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:1	XG:i:1	MD:Z:12T24^C12
+853_1289_1050	181	chrM	573	0	*	=	573	0	TTTAACTGATTGCGGCGGACCGGTTATTGATATAAATGAACTCATGTAGC	%*&&$(+36274':;<:5=6;3;:9:675:<74;:?6=:7878:;>>57=
+853_1289_1050	89	chrM	573	37	49M	=	573	0	TAGCAACAGCCTAAAACTCAAAGGACTTGGCGGTGCTTTACATCCCTCT	AFW2$ETYZPIR\]XKQ\XUTQ[[@F][]MJ[Z]XQNS]LBMT\XOUWU	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_1290_58	141	*	0	0	*	*	0	0	AGACACAGAAGAAAGACATCATCGACAGGTCCATCGTCGTATGCCAGAGC	:846:=:>;;>:9:=8=<=@:;;=;,:9?@;9;><3?=6<1=6=98:/:;
+853_1290_58	77	*	0	0	*	*	0	0	ATAAGAAGGGGGTTCAACGGAACCGTGAACGCCAACCGGAAGTTAATCCC	)<:<;9:>9:6==<90;<<9;;=98<;=<:1=<9.7<;6<1;>8;;<9<5
+853_1297_1934	141	*	0	0	*	*	0	0	TAGGGCTCACGGACTCCATCGCTACATCCCTCGGGGTGAAAGAAAACAAA	4*%#*,9)-*1751,197()*3-,#94&(-),$##.(#1/7%+#,0&,'0
+853_1297_1934	77	*	0	0	*	*	0	0	TAATTTAGGTACGACTAACTCAATAAGCTAATTGAATGAACTAGGACTTA	#&6##)0$)#4)#2##44&###7%/2##%1+#$,#*###$##5$#-###,
+853_1297_514	133	chrM	1985	0	*	=	1985	0	CTAAGTGTGTAACAACCACCCAACACGGCACGTCAAGATGCGCCGATACG	8@8;9>795A<8=9:A?7;@;??;5:><886<;:=6:9:8.=@=:4:9==
+853_1297_514	73	chrM	1985	37	49M	=	1985	0	GAGGCACTGCCTGCCCAGTGACATCTGTTTAAACGGCCGCGGTATCCTA	]]Z\]]][]]]]UU]]]][[]XLU]]\QR]]NLYY[XU]]\X\][YXNK	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_1311_394	133	chrM	7953	0	*	=	7953	0	GGAATTGCCGTCGCGCGCTAGTTGGTTGGGCGTGCATGTTTTGGGTGGGT	@=<><<?@?A<>?A>0(6)</.;<>:2<><07:<5(0;(4&&0;&.+1%/
+853_1311_394	73	chrM	7953	37	49M	=	7953	0	TTGAGAATCAAAATGAACGAAAATCTATTCGCCTCTTTCGCTACCCCAA	0JAJJLX33PV]]]][]]]]]]]]]]]]]]]]]]]]]]]RS]]]]]]NQ	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:49
+853_1312_213	141	*	0	0	*	*	0	0	GATTCGGACAGAGGGCGAGGCTAGAAGGGCGGAGGGGAGCGGAGGCGAGG	?>:<?=?@=@=>;<<<?<=>?9?=:@<;<6<><61:4,1(2.)2&&,+2&
+853_1312_213	77	*	0	0	*	*	0	0	TCGCGAAGGGGACCCGTTATTTTAATAGTGCAGGGCATAACATTTAAATA	6?;==?@<<==A=;=<;8;99:8:<6>:6;<=:3(9/7986)5(./27&=
+853_1321_1372	141	*	0	0	*	*	0	0	TGGACTTCAGTGGCAAGGGCGTCTAAAAATTAAAAGCTACCGTCAAACGC	@A,>@(5);A&/6>>;??;7>9?19619>1=/<89<3;81>/=3>7/?/9
+853_1321_1372	77	*	0	0	*	*	0	0	CTTTAGCTCGCCTCAATGACCCGAATAGCACCCAGAGCAAGACTCCGCAT	5,7),=/'16=1,,':&,5);118181/18<'6;6/1@9,<9)>,,,&>(
+853_1322_846	117	chrM	3881	0	*	=	3881	0	TTTTTTTCAAGTTTTCTCGGTTCGTTCGTCTTATTGGCTTAAATCCTCAG	7'8&:41-,72'$(6;-&$,5-('(4-0#;618,47-5)44#;5::;;;2
+853_1322_846	153	chrM	3881	37	49M	=	3881	0	AAATAAGCTATCGGGCCCATACCCCGAAAATGTTGGATTACACCCTTCC	]YSUOT]YV]]]]XVNP]]]][]]XTW]\\\]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:49
+853_1359_2004	117	chrM	8663	0	*	=	8663	0	CGCAGCTCGCCTCAGGAGCACTTTGGGACGCCGCTATTTGTGCTCCCTGG	,&94:;&75<=&898947:=>8<2?<><=>A?17;?<?.>>=A=@A<<=?
+853_1359_2004	153	chrM	8663	37	49M	=	8663	0	GCTTACCACATAGTAAACCCCAGCCCATGACCACTTACAGGAGCCCTAT	ZK!%VPT]]\]]]\\]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_1359_649	141	*	0	0	*	*	0	0	GACACCCGCTCGAATCCATACACGACATAAGGGGCCTCCTGTGGAAAGCA	7>=41=&7/-)&+,8)/:):7,:<7)/0<:&&;(4(&(86'953.3>'./
+853_1359_649	77	*	0	0	*	*	0	0	GGAGAGGGGCTGCAAAATTTACCGAGCTGCTTCGAGGAGAGCCAAGGCGA	<9;5<=;;::6;:;;1?88998<:>4:*91),4.5$7#,4'#$(,5.%)2
+853_1360_1130	141	*	0	0	*	*	0	0	CAGCTCCATAGCCAATCTATTGCTCACGCAGGTCCGCGCCTACGACGTAT	A@AA><:@8>@=AA@>8@A<?<@?@;=<A;A9=?A;<?>:>1>68<6?<;
+853_1360_1130	77	*	0	0	*	*	0	0	TGCTTAGACTTTATTGCAGTCATAAATACCTATAATCCTTTGTGGTGACA	>A@@<9?A:?>>?8@68?=>>9>/9<<44193577>;:;8?#,5.##4,)
+853_1361_389	117	chrM	15925	0	*	=	15925	0	ATCTTTGGCTTAATCCAGTTCTTAACGACGGGCATTCGTGATACAGCTGT	<94:)746=)9:6>)98798><<A=78A<=A?<A==:;7@>4?8>?=9=7
+853_1361_389	153	chrM	15925	37	49M	=	15925	0	ACTAATCAGCCCATGCTCACACATAACTGTGGTTTCATGCATTTGGTAT	VV]VYYS\[]RP]]]ZY]]]]]]]]]]]]XUY]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:31A17
+853_1366_1495	141	*	0	0	*	*	0	0	CTTGAAACGGTACCAAAACCAAAGCGCAACCCTGTCCCGTAAATTTATAT	AA;>9>>:<<::?8;>7:>597<>/@6=:8>9=A/:;>:;/9==92/819
+853_1366_1495	77	*	0	0	*	*	0	0	AACCATAAGGCGCTAACCACAATCGGTGACACCGGCTCCAAGCTTAGCCA	?;<9)6)&'&;+22'80:-%:&/3.<&)0(;):69;#)67;(8+&<-'%8
+853_1367_802	137	chrM	1422	37	49M	=	1422	0	ATTCATAGGTAGAGGTGAAAAGCCCAACGAGCCTGGTGATAGCTGGTTG	]]]]]]]]]]]]]]]]]]]]]][]]]]]]]]]]]]][]]]PEY]]]]ST	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:4G44
+853_1367_802	69	chrM	1422	0	*	=	1422	0	GTTGTTATAGAACAGTCAACCAGCACTGTCTAAGTGGATTTCCGTGGCGG	=<?;$%&<<&(5>='(3><+648A+*:<@#46><#70<>#*.<3237=;%
+853_1382_1227	133	chrM	682	0	*	=	682	0	CTTGTCCTCTATCATACCAATCTAACTCGACCTTTAGTCTCCTCTCCTCT	<;:99:98::8:#5:;:(7:6<#8<6:%0<89,5944,8:9:4/020*),
+853_1382_1227	73	chrM	682	25	49M	=	682	0	GCCTATATACCGCCATCTTCAGCAAACCCTAAACAAGGTACCAAAGTAA	]]]][Z[\][ZZ]]\XY]][[YY]]][]]UVRQ[[\TSXUVILYPKHS]	XT:A:U	CM:i:1	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:42G6
+853_1383_1269	141	*	0	0	*	*	0	0	CTATTGACCAACACAGTTCAAGCCAATTGAAATTAGACTCCCCAGGCGTT	/))3(<(152,3),<8:2)37;.6/&7$)1/,$0'%4$3&74).0&0%13
+853_1383_1269	77	*	0	0	*	*	0	0	GGGTGCTGCTGTCTCAACGGGCTGAGGGATAGCTGGTGGGAGCCCTTACC	,@)':/)>6:(*'*9&';-(:),4((/,#31;7&/532*8,5:5*75,+1
+853_1395_1324	141	*	0	0	*	*	0	0	TAAGGAACCGCTCAACACTTATGGACTCGATCGGCCGCCGTGGTTGAGCC	4*,19./*)96*83;4,/1,)'27)2082,,'*6(&)&*%(*3422-+1+
+853_1395_1324	77	*	0	0	*	*	0	0	ACTTTCGCGGCCAAGGCCTCCTCCCTAGGGCCTTCCCGACCCGCTGCGGG	)9-',&9*3)9',(1%6%7/4681)11&+:-1/4205()&3',,+$0#%%
+853_1396_1014	137	chrM	13417	37	49M	=	13417	0	CCAAAAATCAGCATCACTTCTACTAGACTCAATCTGACTAGAGAACATC	]]X]]]\Y]]]]Y]]][]]]][]]]]\]]]WR\]]YX]]]]]]]]QO]]	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:42A6
+853_1396_1014	69	chrM	13417	0	*	=	13417	0	GGTCCCCTAGAGTGGGGCCTCGAACCTACAGATATTGAGTCGGGAGCCCG	@<@:===?<;==98<:9>9:=:;@;:;=68::<:::;>:::><<863>9;
+853_1412_1664	181	chrM	2467	0	*	=	2467	0	TATACGACGAATCATTAGACCTCGGGTTGTGTTCAATTCCTGTCCAGATC	(&&&1.)0&1,&$31'.$1-&)#13,*%)+,'$/4,$$*/,5,765)545
+853_1412_1664	89	chrM	2467	37	49M	=	2467	0	TAATGGTGCAACCGCTATTAAGGGTTCGTTTGTTCAACGATTAAAGTCT	WKT\NDIZ]NMRMTZ]]JH,/NDHHV]TTE>RZ]]XMVVSJJZMRYY]!	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:49
+853_1413_877	141	*	0	0	*	*	0	0	AGGTCAGTTTCCAAGGTGGGGGTTGGCATTACGTACCATTCGATTAGATT	?A?<<;A><?;A=<;;>856/>#%###&###%####&&###$$$&#%#$$
+853_1413_877	77	*	0	0	*	*	0	0	GACGGTCGTCCCTATTGTATTCGTCTCTCCGTGTCGTGACGTTGCCCGGT	&)#*648#,9(.#3&&(#9.2,#/%3)#&555#).%3#19-4#4'3,#2+
+853_1437_116	141	*	0	0	*	*	0	0	CCCAAACCAGGCTCGTCCCCTTTAAGATAGTCTCGCCCCCCCTCAACTTG	6>>9;<@7=::=:>=544=54#'8&5-2)#(*)4,&%+#',2-&+&0-*2
+853_1437_116	77	*	0	0	*	*	0	0	AGCTGCGGCAGCCGAACACGGCACAAGGTTGGATAATCACCGGAAGTGGA	$;,)42'#2(#&,,#%#2,2%,',42#$))#*428#%$2.%$%4%*#)%&
+853_1437_1533	117	chrM	9411	0	*	=	9411	0	CGCAATTAAACTTAATGCGACATAAATAGCGGCATCGGACCTCCATACTG	#%*(4-#(4%$#$&4+*2586;9A<89:><5=?>;=?>=:<=8>>:?<@>
+853_1437_1533	153	chrM	9411	25	49M	=	9411	0	TCTATTGATGAGGATCCTATTCTTTTAGTATTGACCAGTACAATTGACT	]]]]]VV]UY]][]]VX]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:1	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:1T47
+853_1486_1272	181	chrM	9431	0	*	=	9431	0	ACTATGAAAAGCCTCCCGACGCAAGAAAGCATTCACGATATGGACATAGC	22%-,))%99<168=961#151,#/9(3%89/76:7)55965689<<7(7
+853_1486_1272	89	chrM	9431	37	49M	=	9431	0	TCTTTTAGTATTGACCAGTACAATTGACTTCCAATCAATCAGCTTCGGT	NHVQR]SN\][RQO@MTMYUVVT]SU]]OJYYXVSSKOSSTRS]]XUOU	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:49
+853_1487_496	141	*	0	0	*	*	0	0	GTCGCACCCCTCCTAAACCCCAGATCAAAAACTGCACCCGCGACCCACTC	6969=651<=::86774;7:<9=/69>0366/8,,8=:</6&31(3,/&)
+853_1487_496	77	*	0	0	*	*	0	0	TTTATTACGGGCGACGAAACGAATGGTATTTCCCTTGCGTTTTTCGCTTG	<,'+856638:)0*.,+&.;7&1+;5-&1779<0:+3)/&+;1&,7()((
+853_1488_605	141	*	0	0	*	*	0	0	TCGCCGCCAAACGATGCACTAATTTGCTTACCGGCCAGGCACGGATCGAA	0)&)&1)/1(6)&(+),1=/*&&(&41,',)&1/(/,9/)1//<)&:15,
+853_1488_605	77	*	0	0	*	*	0	0	CCCGTAAGGAACGGGGATTAGAAGGATGGCAGGGGAGTGGAAACGAAGGG	(%/)'(32+'))1*6776&2%)8&,7)71'2&$5+%))724&0)$('&('
+853_1489_374	137	chrM	14307	37	49M	=	14307	0	CCTAATCCTCCAAATCCTAACAGGCCTATTCCTAGCCATACACTACACA	]][NR]Z]]]]]]]]YXWQY]]WZ[\]]]PT]]]PU]]]X[]XR]]]]\	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:16T32
+853_1489_374	69	chrM	14307	0	*	=	14307	0	CTCTTCAAACTGACAGCGCAATGGATGAGGCCACAAAAAGAAACTTTAAA	>8786=:8:3:2;;;6(=99.3=5*/,%'(+#7121074(25$0,+%,27
+853_148_1347	133	chrM	14085	0	*	=	14085	0	TAAGGCCCGTGCCGGTCCGTCCAATGATATTGGAGGAGTTCCGGAGCAAG	A=;@>>?=@@A@?A@>@A@=9?9<A@;9>>>>>7;=8<=;8;?;18?62=
+853_148_1347	73	chrM	14085	37	49M	=	14085	0	ACTCAAAATAAACACAATATATGTCATCATTATTCCCACGTGGAATCTA	#$]]]]]]]]]]]]]Z[]]]][V\\[]U\[Z]KQ]YOQW]]QUYWWZTQ	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_148_1509	141	*	0	0	*	*	0	0	TGAATGTAAATTAAACGGGAGGAAAAATCTCCCCACAATTGAGGCCTTCC	./<&1=35>,/3(6,,1<3*)7,53)69<&(A<8+(;91).8&+7(:&<7
+853_148_1509	77	*	0	0	*	*	0	0	GCTGGGTGAAAAGGCCCCGGCTTCACAGAATGTAATTTCTAATAGTCTTT	-'-:+&1.,)&&=(=)?7=<=4&,>:(;,&<))))8)+(,'&(4&,(,3)
+853_1493_1908	117	chrM	14920	0	*	=	14920	0	TTGTGGTATAAAGGACACGCCTTGGTGGCCAAGTTGTCAACGTAATCATG	;<<9:=7<;;9<?=<;9<<=<88?>==;?<==;;=><;===:::>?;<@;
+853_1493_1908	153	chrM	14920	37	49M	=	14920	0	TTCTCCCCTGACCTCCTAGGAGACCCAGACAACTACACCCCAGCTAACC	YY[]]ZX]]YYY[]]]]]]][\]]]]]]]]]]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:8C40
+853_1493_452	141	*	0	0	*	*	0	0	GAAAGGACCAAACCAGGAGCATCCACCCATGGCCGCTAAACTAGGAGGAG	$*)&'#,,,##(*#'%#%##(#))###%$$$##%###$#)###'#%%(%#
+853_1493_452	77	*	0	0	*	*	0	0	CGCTCTCCCGATTCAGCAAAACAAACAAGGCTCCACCGTCCCGGGGCCGA	'$),&/'53(%$((6'*'(&+%694&(2.1'&1(3&2'9/%)(&)()'(/
+853_1498_1797	141	*	0	0	*	*	0	0	TGAAGGTCGCATGGCGCGGATTGCACAGCAGATCAACTGTTTCAAAAACA	3=#&&04&',.8#*&-:&.*./$'#);%.$21'0&&/&###4$&%%0$#$
+853_1498_1797	77	*	0	0	*	*	0	0	CCTCAGCGCCACCCAGCTTGGAAAACTAAACAAACAAATAAACTTTCACT	&&&&&#&#######&$##&########$&$###&$$$###$$#$#$####
+853_1499_1261	117	chrM	2408	0	*	=	2408	0	TTTCATTTAACACCGGGAATGGTTCACAATCAATGCCCGAGCAGCACAGT	/2&7=)6&?<)/56<9:<9:7&;7<:<9<89;>9A><>>?5<<;=<=:;:
+853_1499_1261	153	chrM	2408	37	49M	=	2408	0	ATTCCAGAGTCCATATCGACAATTAGGGTTTACGACCTCGATGTTGGAT	]/4ZY]\\QT]KO]]YMXZ[WOMN]]TW]]]\VSYQSSQXVWQT[RY]]	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_1509_820	141	*	0	0	*	*	0	0	ACAAGAGACTACGAGGACACACTCCGGCCCTAAATCGCGAAAAACGGCCC	',.1438/1)&1*3.18,72875),/*&://.4&),+/#+3%5*)56((&
+853_1509_820	77	*	0	0	*	*	0	0	GCAACCTGACCGTTTACACAACGTGTGGAAAAGAGGTGGGAGAGGGTTGG	18;:.49;5+6/<=879672373=.:;;47$'%06262%562%':5$5&:
+853_1510_448	117	chrM	982	0	*	=	982	0	CCGCACCGGGCAGCAGCCAGGAGGATTATGGGGTACCTGATGTTGTTTGT	##$########''%$+'4)%0%34)82'2,(/27/,*:4'2177460826
+853_1510_448	153	chrM	982	37	49M	=	982	0	CCAAACATATGAAAGGAGACAAGTCGTAACAAGGTAAGTATACCGGAAG	QSZ\WTIO[MGR[]]UO]]Y[WWYTSPY]Y[X]]XZV[]TRU[Z\[Z]$	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_1511_1886	141	*	0	0	*	*	0	0	GACGTCGTCGTCGTCGTCGTTAACCCTAAGGTTCGCGGGACCCCTCAACA	99;<=:>?<;=8;>=;8=<==9:8::==:9,8?:;)0<6.13;+:*5/:)
+853_1511_1886	77	*	0	0	*	*	0	0	GGATAGTAGGAACGAGATGCGGGGAACCCGTTTGGTGCTCGGCGGGTGTG	:A(>/2;&>='7&>::(1678>>:1&(<::11,.<8,(),8>%8</):(<
+853_1511_561	133	chrM	1971	0	*	=	1971	0	GCAAACCGTTCTGATGTAAACAACGTCAATTTGGGCCTTTACAAAGCGTT	?A===@A?><A8A>:>9;;=@828;'#+99:#'9;;4#>6-1/89,-&45
+853_1511_561	73	chrM	1971	37	1M1D48M	=	1971	0	CTTCCCAGTATTAGAGGCACTGCCTGCCCAGTGACATCTGTTTAAACGG	!!\]]]]]\]ZW[]]QQ]]]Z]]UT[]]]]]]]]]V[]]]SAMXYTTXK	XT:A:U	CM:i:2	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:1	XG:i:1	MD:Z:1^A2T45
+853_1530_1652	117	chrM	5148	0	*	=	5148	0	AGATTCCGGCATTTCAGCTAGTGCCTGCCCAGCCGTATATATTCGGCAAA	+$5/5&$4982/;*;5#:3;(%;:;0'<7952:561);57)#<0-%6;58
+853_1530_1652	153	chrM	5148	37	49M	=	5148	0	AATTTTAGTTAACAGCTAAATACCCTAATCAACTGGCTTCAATCTACTT	DM[\UX]]\V[]]]]]]]]]]Z]]]]]]]]]]]]\]][]]]]]]]]]]\	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:49
+853_1530_202	141	*	0	0	*	*	0	0	GGGGACTGAAGAGCGGCCATTAAGGGAGAATTGAGGAGAAGAGATGAGAA	;<;99=:99>6>8:8<?:898A=2<7@88>)6#/+,&)(#,'-%#+-*%(
+853_1530_202	77	*	0	0	*	*	0	0	GGTTCATGGCGGGACATGAGGTGCCATACCGCAACCCTCTAGGCTGATCG	/9::8:7;58;0<%;;9=(3;8<1;73;16;1=57686/585:30;/<61
+853_1569_1617	133	chrM	15857	0	*	=	15857	0	TAATTGTATATAAATGCTGCATGCCGGGAAATTGTGCAGCTACGTGGAAG	<A@=>?><<>=@@?=@?;=<=<9A<==;AA>;57:<?<;75>67695@:6
+853_1569_1617	73	chrM	15857	37	10M1D39M	=	15857	0	TTCAGGGCCATCCCACCCAACCTCGCCCATTCTTTCCCCTTAAATAAGA	]]]]]]]]]]]]]]]]]]]]]]]]WX]]]\Z[]]QO]]\OQUSWMNK5I	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:1	XG:i:1	MD:Z:10^T39
+853_1570_1472	141	*	0	0	*	*	0	0	CGACGCACGTCCGCAGGTACCAGGAACGTCATCCGTAACCGCGGGCACGC	<=<>==;=:@>@<@==AA?A@>A?@<@?=A9>@?;>=9?<9>A>><3;=7
+853_1570_1472	77	*	0	0	*	*	0	0	CACCGGGACTAAATTAGCTTCTCGTTCCAGGCGCATCGGACTCACGTTAT	@A=?<A?@?A=9=AA=@=;>?>?<@=><=:<@9=,A?;<<7<=61;>9/?
+853_157_314	141	*	0	0	*	*	0	0	GATAGCAAAAAAAGGGGCCGAGCGCAAAAGCCGACCTGAGCACAGACGAA	9;:5461242#)#*1####('$$$##'#%#'$$%###/$%($#'#$$#+#
+853_157_314	77	*	0	0	*	*	0	0	CTCGCCTGGAATTTAGCCATGGCTATGTTCTAGGTGCTTTGTTAGTTGCG	79();(1<))&2(5+&8&+.9-'198,',))&&7&:*,4)(6&2&/:&77
+853_157_582	117	chrM	893	0	*	=	893	0	ATTTTGATATTGCCTAAGCCAGGAGGATTATGGGGTACCTGATGTTGTTG	2&==93398<:46<@<:?:==6>:<<<=?=>;;<;A;;:>;;><::??:=
+853_157_582	153	chrM	893	37	49M	=	893	0	GCTTAATTGAATCAGGCCATGAAGCGCGCACACACCGCCCGTCACCCTC	O/3]Y[12]PSUUY\]XXYZ\VY]]]]]]]]]]]][]]]]]]]]]]]\\	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:49
+853_1585_2023	141	*	0	0	*	*	0	0	AGGGGGATGCAGGCAAGACAAACGGCACGGGCGTGGGGAGAGGTCCCAAG	?>@A>=44@@8<5A<7>:=?577<?867=>4588>:;88<59;<=:;)9=
+853_1585_2023	77	*	0	0	*	*	0	0	AATAAATATTACCATTTAAGAAGGAATACGAAAAGACGCCGGCGTCCACT	:A=>5#:==<+=<==)=?<=&<=<>%<<?;)<=<=#>9<:$<;;:&?3<5
+853_1585_323	133	chrM	8665	0	*	=	8665	0	CAAGGGACTATAACTGAGGGGTGTGGAGCGGTTGGTTGGCCAGCGCATTA	<;:>?<0<;;=;9781&(,95'+$-+2#,#'',1',$,$1/5+#2)6%&(
+853_1585_323	73	chrM	8665	25	49M	=	8665	0	TTACCACATAGTAAACCCCAGCCCATGACCACTTACAGGGGCCCTATCA	#"]\X]]]]]]]\]]Y[]]]QO]]\PPYZ]\Y\WXULU]PDPYVVSIQ\	XT:A:U	CM:i:1	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:39A9
+853_158_402	141	*	0	0	*	*	0	0	TCACAGACCCGAGGAAGCTTCGTATATTTGCCACTAAGGGCGTCGGGGGA	5;&35,<55<8<6;<3646:618477::95<92=752071+2339-.#11
+853_158_402	77	*	0	0	*	*	0	0	GGTTGTTAAACCGTCCCGGGCGTTATCCACGTGTGATACCCGCGCATGTG	711&$(-)##.,&((&(4('83><-:94,'.;2&*:<0%&7,3#+02#(#
+853_158_569	137	chrM	6195	25	49M	=	6195	0	ATCCATTGGCTTTCTAGGCTTCATCGTATGAGCTCACCACATGTTTACA	$]\YYYQM\]\WX]\\MN][YQS[\WS\YV]]VV]]MFY\]XPSV]SGL	XT:A:U	CM:i:1	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:30G18
+853_158_569	69	chrM	6195	0	*	=	6195	0	TTCGTAATTATATTTGTCGGGCATTATGAGTACGGAGGTTATTATATAGG	8>34:8.56,9/7<=-80.562,994:)3,<#%85(,#7&%,'#3#,#%&
+853_1603_1995	141	*	0	0	*	*	0	0	CTGGTACCGGTATGAGCCTAGGATAGAGCGGCAACTCTTATACTGCCGGT	9=:8;>>=<==<<>=AA@><A><<=?>?=<<??<<;?;;?<86=<9?=3;
+853_1603_1995	77	*	0	0	*	*	0	0	CCAGGGAGATCCTAACGTGGAGCCGCGAATACTCCCAACCACCTATACAG	:;;;>=<9A==;9:=;6::?:9@<@:8<<;:6><@<<9;@595:684279
+853_1603_500	181	chrM	13884	0	*	=	13884	0	AACAGGCCGACTTTGGTCCAGGGGAAACGTTTGGTGACTCAGAATAGGTC	%/06321266(/.:504#:7(&,9:39544<<8<95<2>:8<8:=87:<:
+853_1603_500	89	chrM	13884	25	49M	=	13884	0	CTCAGTAGCTATAGCCGTTGTATAACCAAAAACAACCAACATTCCTCCC	,T]YOQSTUSUY[\XU[]]ZZTY][]]]]]][\]\]]]]ZVX]WZ]]]]	XT:A:U	CM:i:1	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:9C39
+853_216_501	141	*	0	0	*	*	0	0	CTTTTAATGGGTCCCTCTCTTACAAGGCTCTGTTAATTTTTCCTTTCGAA	85<85,7=47;:627;<6<4<::445934*:5<2)$9&-$273#/#6-.*
+853_216_501	77	*	0	0	*	*	0	0	CCCTGGCCGGTCGGGTGCGTCACGCGCCTGGCGGAGCTCCTAGCCACGCC	/>61=+11:/5/+/(&/1'%#:3&;&93(';0$4&*9,&/+))2')65.&
+853_216_648	117	chrM	1235	0	*	=	1235	0	CGAGGCAGCCCATTGAGTTTGGTCCCCCTTAGTTACAGGATTTCCAGCCG	+&'%(14'2,09:7(776;53=99/58>75;88784;/:8)884;7/;6/
+853_216_648	153	chrM	1235	37	49M	=	1235	0	AAGGGAACGATGAAAGATGTATTAAAAGTACTAAACAGCAAAGCTTACC	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]SU]]]YY]]]]]]]]]]]]]	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:19C29
+853_218_1907	133	chrM	1146	0	*	=	1146	0	GAATGGCTTGACAAAGGGAGAAACGCATATCCTGTGATGTTATTTAAGAG	5).5<9?642>9+;9<;;:28=4886909479&7,3;&#9+:,6'5,(&/
+853_218_1907	73	chrM	1146	37	49M	=	1146	0	TACCCTTAGTCACTTAACTAAAACATTCACCAAACCATTAAAGTATAGG	YQOTRVYOS[\Z[XX]\YOS]XW]]\Z[X\ZUZWZ\XVVZQPMKWTUJ>	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:49
+853_219_184	141	*	0	0	*	*	0	0	CAGTAGTTGCATGAGTCATGAGGTTGGGTTGTTGGCAGCTGTTGTCGGCT	'*)%%,,##3,1+,,#'&)#+#/-),%(&+$)%#%$&(&/#&(#%#'$%$
+853_219_184	77	*	0	0	*	*	0	0	GCATTTGCGACCATTTTGGGGTTGGTGGGGTGGGTGGCCGGTGGGTTGGG	/&3&,)/,$)/&)2&#%(:/+#,*&$+$$(&1)/&+1##'&'#-,)&'%-
+853_233_615	141	*	0	0	*	*	0	0	GCCTTAAATCGATATAGTCGCGGGCCCCAACCGGGCCGAGTACACTGGGC	;@),<%8)(&<(0)<&<)&53.*%/,5,6*/6;.)+>,%.,7,#,,*$%$
+853_233_615	77	*	0	0	*	*	0	0	TTATGGATTAAATTTTAGCTAATTTGGCCCCTATGGATAAGGAATCCCTA	(7.1:154753447,222383647814041,3+,4.-/%+21((2)2'7)
+853_233_834	137	chrM	8993	37	49M	=	8993	0	CCACCCACAGGTATCCACCCCTTAAACCCCCTAGAAGTCCCCTTACTCA	]]]]]]]]]]]]]]]]]]]]]]\\]]]]]]]]]OQ]]VY]]SOVQ\]YS	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_233_834	69	chrM	8993	0	*	=	8993	0	GGGAGTTCTAGTGGAGAGATTATTCGCCGCCAGCTGCGTTGAGAGATGAA	=<<=;><:6:;<<3>=:=8>><<8;<=63;>99099&%,##&'2##%/$%
+853_244_474	141	*	0	0	*	*	0	0	CGGACAGAACGAAAACTCCTAACAACAGAGCTGAGCAAACCAATCCAGCC	*$(5.+###%$$2*+'#$('/(#*$$$$0%'$$3',$(*#&'4(%$#/$$
+853_244_474	77	*	0	0	*	*	0	0	GATTGAGAAGGCTGCAAACGGCGAACGACCGGGCGGCCTAAAACCACGGA	)15$&/&*,&,,(&&0.,&,07:)/1/4&))96&)'/&''.(+&1'&)''
+853_244_781	117	chrM	652	0	*	=	652	0	GCAGCCACGAATGTCAAAATCTGGACCACTATACGGTGTCATAAATTCTT	&24)57:,,<=892<?=>;9>989@=;>;:?7><<>;=7=86>>;:9><8
+853_244_781	153	chrM	652	37	49M	=	652	0	CGATAAACCCCACCATCCCTTGCTAATTCAGCCTATATACCGCCATCTT	ZOE[\XROW[]ZQJW]I?T]]][]]]]Z]]][Y]]]]]]]]]]]]]]]]	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:49
+853_255_146	141	*	0	0	*	*	0	0	GGGAAGAGCCAGGGAGGACTGGGGCTGGAGCAAAAGAGGCGAGGGGGGCG	#$##$%###&##'#&##$###&#&$######$####%%$$/$'%$'#$$#
+853_255_146	77	*	0	0	*	*	0	0	CCTATGTCCCCTGACGGCACGCCGGGTCACCGAGCCGGGCCGCGCCCGCC	5.)8&)'++7:',%'&&,(1)1/8'('%1)20#%,4-$.&$''(1(0(/7
+853_255_403	117	chrM	13900	0	*	=	13900	0	ATCCTCAGCACATAAGTGCGTGATTACCGATTGTATCATCGCTCGGTTGT	130>7&9+9:-83?<09=>;85?>=78;<<=99;>)87;>;9;=>?<:8<
+853_255_403	153	chrM	13900	37	49M	=	13900	0	GTTGTATAACCAAAAACAACCAACATTCCTCCCAAATAAATTAAAAACA	7FFGW]]]RIS\]]YT\]SMKT\TW[\\]Z[]]]]]]][[]]YZY]]Y\	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:41C7
+853_256_428	141	*	0	0	*	*	0	0	ACGAAGCGGTGTACCTGGCCCTACGCGGAAAGGGGGAAACCTTCCCAAAT	@?8<A:A969=<:71?;;<5==>81><1<&??:264@>>/=<-819><()
+853_256_428	77	*	0	0	*	*	0	0	TAATTCAAGCAGATAAAAGAGTGTGCGCCCACCCTCCAAGGAAATAGAAA	2=<66<=>6::3<,8;>:3<3825,:1:98897,057::24<986:+,::
+853_256_834	117	chrM	9813	0	*	=	9813	0	GCCCTCTGGCAAACCTACGGTAAGTTTGCCATGGAATCTTTGGCGACATT	######$$##############$#&####$&$##&##########)#&%'
+853_256_834	153	chrM	9813	37	49M	=	9813	0	TGAACCCAAAAAGGGCTAGAATGAACTGAGTATGGTAATTAGTTTAAAC	DL]TAFU]\TDH]]]WZ]\NU\VZVU\]]]Z]]Z\\Z]]]]WZ]]]WWX	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:14A34
+853_266_1092	141	*	0	0	*	*	0	0	GGCGCGGATTATTGTCTTAGCTTTGCTACCGTTATATGCGCTTGTCTTGT	,318925,37;9,999<52622989/:7220#3$247,',*1'##,1,#5
+853_266_1092	77	*	0	0	*	*	0	0	GAGCCGGAACGAGACAACCCGTTCTTAACATCCACCACGCGTGGGCGACG	;)2))/8%'10:712<67<3(39</68/5)6&')/170&49)6)//,)&&
+853_266_697	181	chrM	1002	0	*	=	1002	0	CAAGTCCACTTATATATGCGCATCGGGTTTTTGGTGGAAGGTTGTCATGT	::<;9796:::;9;;;<4>=2=;<;?=>?=;==?><6;:<:<>=@>;<=?
+853_266_697	89	chrM	1002	37	49M	=	1002	0	AAGTCGTAACAAGGTAAGTATACCGGAAGGTGTACTTGGATAACCAAAG	]]]SQVY]]\]Y[ZY][]]]]]]]\]]]]]]]]]]]]]]]]]]]]]]]#	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_279_1056	141	*	0	0	*	*	0	0	TGGAGGGTACGATTAGAAGAGGAGGCGGTACAAATAGACAATTCCTCACT	=<;<<=;><:>;=<<=>=:<<>=;<;=;<==8<87<7@8=<9<9;:1:3:
+853_279_1056	77	*	0	0	*	*	0	0	TGTGCTCTTCCGTCATAAGAGAACCTTAAGCTATCACGGACACAGCGCCG	:;76;:=;:<7::;<<<3<76;:<9=<5;87=3<=5@3<7388771:;5<
+853_279_1330	117	chrM	8561	0	*	=	8561	0	CTTTTTCCTTCCCTTGCTTCGGTGAGCATGAGTTGCCTTCCGTTTTTTAT	7%,117%%154#2639#1#,5'+)23%($$1#$#1<$&>-<-'9)4).<+
+853_279_1330	153	chrM	8561	37	49M	=	8561	0	AACTATCCTCGAATTCGCAGTAGCCATAATCCAAGCCTACGTATTCACT	JI[VXUU]]][\]]]WW]]]]\]]]]]]]]V]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:24T24
+853_292_158	141	*	0	0	*	*	0	0	AACTTTTCTGGCATTTGAGCGCGTTTTGGAACTGACGAACAGATGCTCCT	===9<<;<=<<>:<:=<>::7=9<=:;9:>;;98=58>;>4=@;:,;=1=
+853_292_158	77	*	0	0	*	*	0	0	AATGTGCGTTTAAATATTCGGTCTTGGATGCTGATCAGCTAAAACGTATG	;=;;9;>>89=><94<;>9:;:896;;<8;3<<177=:5<6=:73<:9'9
+853_292_700	117	chrM	2055	0	*	=	2055	0	CCCCACCACACCAGCCCCCCAAGCTTATACCCCGTACTCTCCTCATTACC	5.&/,#/++%):4'*/66:/.<6:82<6715=74+&>;<8:;>;=9<;9=
+853_292_700	153	chrM	2055	25	49M	=	2055	0	CACTTGTTCTCTAAATAGGGACTTGTATGAATGGCCACACGAGGGTTTT	U[XVKS\MRZS\]ZTXZX]WT[[]]]ZUUT]]]]WVZ]]]]]]\ZUU\&	XT:A:U	CM:i:1	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:9C39
+853_33_1583	141	*	0	0	*	*	0	0	CCCGCGCTCCCGATAATATAATCACCGAAACACGAAGACCAACAGGCCCA	),+&#,)',$##2$),%2'+#$)2),#$(+#+##&*%(-%1%#(##$$2,
+853_33_1583	77	*	0	0	*	*	0	0	TATGTATTTCGGTACCGCACAGANCACTCCAACCCGATAGCGTCAAGTCC	/&2%,)+,+:&#:;,5*)8/%19!,%*1/%;#<952%:27#%%&4.,#-1
+853_33_1649	117	chrM	7331	0	*	=	7331	0	TCACCTAATCTGCATGCAGCTCTGTCNTCATGTAGGAGTTAGAACGAAGC	%1.)#$$1%%$)#)$&);=1968:42!:8<:78;888<6688=<<9<:9<
+853_33_1649	153	chrM	7331	37	49M	=	7331	0	TCACAGTCAAAACAATAGGCCACCAATGATACTGAAGTTACGAGTATAC	XNT[[[YTQXUVKHX[]ZMOZ]SV]X]\Y[\ZVRTZ]][Y]]VNQUWSU	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:37C11
+853_34_1182	141	*	0	0	*	*	0	0	GGGAACATTATACGGCTTTCGCCCCCTAGACCGCACTGTGTTGGGCCGTT	>>>:9<<>><;58987;::9718859:2;75'3%(720&14%6(,51-&&
+853_34_1182	77	*	0	0	*	*	0	0	GTTAAGGGTGTTAGGGAACCCTANAAAGCCCGGGTTTCGTGGGGGCGGGC	;7;5*982;:/;,46::69<4<(!4295.6144&::<4*.-+%$#.#,(#
+853_34_1358	117	chrM	7792	0	*	=	7792	0	CGCCTCGAATATTGCCCTCAGATCAANACTGTTGACCCTCGGGCCAGGCC	9/8<9;6:<8=,>=<<;=<<9:><>:!9;@=:>?<=>><=>>?<=;??<<
+853_34_1358	153	chrM	7792	37	49M	=	7792	0	CTCCCTAGTGATATGCCACAGTTGGATACATCAACATGATTTATTAATA	MV]YU]YXXTZ]ZY\]]]][]]]]]]]]][[]]][WX][Z]]]]]][[]	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_35_596	133	chrM	477	0	*	=	477	0	GGCTCCTATTTTATTACGTGTCCTTCTCAAACTGACAGCGCAATGCTAAG	>978>8=9;>;:2>;;85=3;::=;::7:8:68)<5;859>?<>:<6<58
+853_35_596	73	chrM	477	25	49M	=	477	0	CGATAGCTAAGACCCAAACTGGAATTAGATACCCCACTATGCTTAGCCC	!SSNPYYYUQPS\VSSRPPZ[Z!!NXX\VXLL]]XUMKXYRTRKLV\Y!	XT:A:U	CM:i:1	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:22G26
+853_35_669	141	*	0	0	*	*	0	0	TTCTTATAAAACCGCTTACCCCCTAGGTCCGAACATCTTGCAGGGTCTTG	,)&#<&38':&)-2/*4-'*+,5:0(3(+.+&,)9,&%1%*'(+.+-&&'
+853_35_669	77	*	0	0	*	*	0	0	TTGTGCTGTCACGGCAAGGCGGGNGAGTTGGTGCGGCTACTCTCATCTGG	#4(,,&5,'-2(&5'10&)&-&3!,)+.*9&););:,8)7&3<&,/1:)&
+853_365_1447	117	chrM	5643	0	*	=	5643	0	ACCATTGGATTAGGCAGCCGTGGGGCATACTCATACGGTCTGACAACCAT	$###$#$#(##&$&#8$277:3079<60;993;8;5+97=7)9:;:(7<6
+853_365_1447	153	chrM	5643	37	49M	=	5643	0	TCCCCGAATAAACAACATAAGCTTCTGATTACTTCCCCCATCATTCCTA	NJUSYMK[RT[XXTY\ZZOT]]]XX\Z[XY]]]]]]]]]]]]]]]\]][	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:0C48
+853_365_890	141	*	0	0	*	*	0	0	AGAAGTCCGGGCGTAGTGTATCCGAGGGGCAAAAACTCTAACAACGGACT	=9?=>7:9;A=9==??:<8?<=9@6<:>>8<?=>:=6:=<?8;<398:8)
+853_365_890	77	*	0	0	*	*	0	0	TGTGGGGGGGGAAGGGCGTCCGGCTAACGTCTCGGCGGGTGCGGGGGGGG	<:7:=<;;;<9==><<;9<>:;>>;:;7<;<68(-#6+1&5,(4'2'.*2
+853_368_1718	133	chrM	1149	0	*	=	1149	0	CTCCCCTCTCAGCTTGATTCCAAACGCCGGGATCTAAGGGTAATGTTCCG	;;A>A>?A;@@<><9A;6:?A:=1><<A@6=5515A<>8397:@1<6<3:
+853_368_1718	73	chrM	1149	37	49M	=	1149	0	CCTTAGTCACTTAACTAAAACATTCACCAAACCATTAAAGTATAGGAGA	(]Z\]SR]]]\Z]]]]]]]]]]]]]]][]]]]]]]V]]]WW]]]SO[[X	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_369_74	141	*	0	0	*	*	0	0	GGGTTCAAGCATGGGAAGTGGACCACAGCTCCCGACGGTCCACACCATCA	=9756::884:54:791:47358965758589965&:94,&969;(5143
+853_369_74	77	*	0	0	*	*	0	0	AGCCACGGATCAGAGGGGGAACGATGGTATAGGAAGGGATAAGTCGGGGA	7:9875:8:7<69;78.$2/9&)6%0-$5)96&879'$8,&(/))6*2&(
+853_375_367	141	*	0	0	*	*	0	0	GTTTTTTGGCGCGAGGTTTGCGCAGAAGGGCAAATTCCGGCAGCGTCGCG	5&')&(9<1,=?>:+,)6)&7,&(05/)1,',(0'&),&(6/7,,5,,44
+853_375_367	77	*	0	0	*	*	0	0	CCGATTGTCTTTCTGAGCGCACCGAATCAAGGTATCTACTAGCATAGCAT	'+);,18&&&''),2&))4,%/1&5.1+-'/,'-1()))&'*)'+)&/&)
+853_375_856	137	chrM	883	37	49M	=	883	0	AGAATAGAGAGCTTAATTGAATCAGGCCATGAAGCGCGCACACACCGCC	]]]]]]]]]]]Z]]]]]]]]]]]]]]]]]ZTV]]]]]]]\[]]]][]UQ	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_375_856	69	chrM	883	0	*	=	883	0	GTTTACTTGAGTACATCCTCAAGACTGTCTTATGCCGAGGCTGCCTTTGA	8<;;>??83=>;63:@:?9=@<=>8@:?5?>8=1?;98;9<>4&40&2(%
+853_381_1334	181	chrM	556	0	*	=	556	0	CCCCATCATACCACATAACACCACCAAGGCTCAAGGTGTCTTAATACCCA	*%-#&2+,%&#2'%#,&%&.%7;';=?>%=<?>68:?@,;=?>%)4@>=@
+853_381_1334	89	chrM	556	37	49M	=	556	0	ATTCGCCAGAGTACTACTAGCAACAGCCTAAAACTCAAAGGACTTGGCG	WLNHN\]]]]]]]]]]]]]]OJ]]]]]]]]]]]]]]]]\]]Z]]]]]]'	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_381_1648	141	*	0	0	*	*	0	0	AGAAACGATCACAAATAACCCAAGTCTCGCCAAGAGAGCTTGATCCGAGA	8:9:;<;::::;65&:178(:8:517:35$3385)958.$<578%7:7.)
+853_381_1648	77	*	0	0	*	*	0	0	TTGCAGACTAGTTTCCAGGTATATTTTTCAAAGCCTTATTTTCTTTTTTT	986+0<95:8;(>5<<)58?,4)8;<5&,9/),()35)-3&7(&832$&/
+853_383_1666	141	*	0	0	*	*	0	0	AACCACTGAGTACGTAGGCGGTGCAACCGAACCCCGAGTATTACCTACTG	18$+&,#./,8#8('./99#4(58);.22,;,2,%6,%)(,.,*957)('
+853_383_1666	77	*	0	0	*	*	0	0	AGCGTCTTACAGACCCAACTTGAAGCTTGCAGGAAGGGGCAAACCAAACA	,,('6:.6-&7,(=15&%&<&&1(/16',.(1&&8($$&&+&)76,5815
+853_383_962	181	chrM	865	0	*	=	865	0	GGCCAATTATTGCAATGGTATGTTGTGGGGCTGGGGAGGTTGAATCTCTG	5*;3<8)659?)@>?:(99>:7==<?5?;A=:<2>A<;:==<=:>;9??@
+853_383_962	89	chrM	865	25	49M	=	865	0	GGATTTAGTAGTAAATTAAGAATAGAGAGCTTAATTGAATCAGGCCATG	O\]SGKS[[MJ]]Z10[]WHG]]WQT]]]HI\\YBDWTW]XU\]]VY]]	XT:A:U	CM:i:1	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:8C40
+853_389_1983	141	*	0	0	*	*	0	0	TGGAGCTACACCATCCCCTTAGGAGGGGGAAAACGTGGGGTGACGTGGCG	715;6741498/6459/6448/6573'569<98845/6:9$),4%.560(
+853_389_1983	77	*	0	0	*	*	0	0	TACCGTCTTTCGATTGACCGGTCGGTCGGGGGCCGGGTGTCCGGTTCCGG	,&9):88.&'&&/.&4&%4(6#$4531,)66,.2-51#'2/&'5845,8.
+853_390_660	137	chrM	1251	37	4M1D45M	=	1251	0	GTGCTTAAAAGTACTAAACAGCAAAGCTTACCCCTTTTACCTTTTGCAT	]]]!%\W]]Z]]]]]YW][ZY]]]]WU\]]]\]Y\]]\V]23]]]HFRS	XT:A:U	CM:i:2	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:1	XG:i:1	MD:Z:0A3^A45
+853_390_660	69	chrM	1251	0	*	=	1251	0	CTAAGGCAACGTATTGGTCGCCTTATGGTAATGGTACGTATAATTAGGCT	>8A==;<<<>;;A98<;:<=>;9;=;;;;>;8<;;@5;:81=:894;:),
+853_392_1916	141	*	0	0	*	*	0	0	GATGCATATCCTGCAAAGCACCAAGGATGGAAATTTGCGCTAAATAAGCC	@;@A?>A;?@A>@@<=9A>??=<;A@9>A?=:;?=>;?<<?;<962&6):
+853_392_1916	77	*	0	0	*	*	0	0	GCGCCGGGGTACAGTGCAAGCGCGAACGAGACGAATTTGGGGAGGGCACT	:<=<<<>>;>9<28A;<:*;:=95889<.:8;>34;6)%+6;05&::1+1
+853_393_183	137	chrM	660	37	49M	=	660	0	CCCACCATCCCTTGCTAATTCAGCCTATATACCGCCATCTTCAGCAAAC	]ZZ]\[]]]]]]]YZ][[[]]Y]]]]]]]]][]XV]]SGT\ULSXY]Z[	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_393_183	69	chrM	660	0	*	=	660	0	TCAGGATGGCCGTAATAATGGTGGCGTACACGCGCAAATTCCTTATGCGG	=>;<<=*;4-;+9':>$427:&972<)71=;*793<1<1:;:7/9=)7/;
+853_397_1746	181	chrM	9541	0	*	=	9541	0	GTCGTATTCCTTCCTTGCAGATATGTCATACATCCCTGCAATCAGACGAG	,5,+2.4.7/><1:777)5;78/97?:0<582/9<880;8;98;:7987?
+853_397_1746	89	chrM	9541	25	49M	=	9541	0	CGCTACTCGTACTCATCGCATTCTGATTACCACAACTAAACATCTATGC	DF8=*%8:ORJJNQOMD>LLOWUYMGGIQFNYV]SKPU]]VJGMFFVPJ	XT:A:U	CM:i:1	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:26C22
+853_398_593	141	*	0	0	*	*	0	0	GACCCGTGGGCTCCACTGGTCAACGCCGTCCTATATGGCGGACTAGTCCT	(,1&31,+//,&1?0,)(>91),,7(/0(1(3=/1>/)&83:5336:3-3
+853_398_593	77	*	0	0	*	*	0	0	AATTTAACGTATGCGGTTTTCTCTTCTCAATCCTCACACCGGTAAGAACA	(=714-?,:<,91)717878<7/9396=51,<<=,)/;8=5,:/8;7813
+853_423_1430	133	chrM	8093	0	*	=	8093	0	CGGAGAACCCACCCGAGAGACATAGGGGCGAGATTCACCTGCTTTTTAGG	>>5:<8<A<=:<=@<=5?:/=:8;7:=9<<87:<897:7891.=%;8/7;
+853_423_1430	73	chrM	8093	37	49M	=	8093	0	CTCAATCCAACAATGGCTAGTCCAACTTACATCAAAACAAATAATAGCT	W]]]]]]]]]]]]]]]]]][\]]]]]]]]\Z]]]YW]]TKTO>=D?KXK	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:6T42
+853_424_115	141	*	0	0	*	*	0	0	TGTTGACTAGCCGCAAGCTCCCTGGACAGAGGCAGTCTAAGCGGTCCGTT	;<<8<<>=9<=?:8:?:?8:A>;3;<=<8;<9?69>99;:;;77;:9/,;
+853_424_115	77	*	0	0	*	*	0	0	CCCGATACAGACCATGCGAATCGAGACGGGCTGTCTCCAGTCCAACCCGG	6>8:8<;>7?;;<,7>>;;8:<=16;:789549$%&6)'040$('%0''2
+853_439_1980	141	*	0	0	*	*	0	0	TGGAGCGATTTAGACCGTATTTTAGTCTCCGCCGATAATAAGAGCAATCT	952;8:98452>4=9;:0=3)6/76-666=777+<4::&86.;'7;:+5'
+853_439_1980	77	*	0	0	*	*	0	0	CAATCAGTTTATGCAAGCTAAATCCCCGAGACTGAGAACGAAACTCTCGG	,<='0/71(/:.;2<<9:5>7?2<8<=9987;51?*=>:(7;<,()&:6/
+853_440_379	117	chrM	8797	0	*	=	8797	0	TCCGTCGCGTCTCACGCCTCAGGAGCACTTTGGGACGCCGCTATTTGTGT	6<=8:7:366/<70;+5:9;7:;:<:899=89<8;:79><3:<8:5<8=9
+853_440_379	153	chrM	8797	37	49M	=	8797	0	CCTTACCATATATCAATGATGGCGAGACATCATCCGAGAAAGCACATTC	OOR\KGMS]SU]]ZY]YOQJQ]]\]]]]]]]]]\]]]]]]]]]]W[][X	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:21A27
+853_443_1353	141	*	0	0	*	*	0	0	GACGGAGGAGGGTAGTGCGGGGGGCGGGCGTGGGGCTTGAGAACGGCTCA	95:19@9979:<4,82>02:3;5.46:65:5<95<7:;7;:>9*;:<:82
+853_443_1353	77	*	0	0	*	*	0	0	AGCCGAAACGATTGTCGTGTAAAGGCGTCCGCCGGGTCAGATCGAAACCG	921/5>7972<889;:;9:3?>5;/95<509=7.878/4/;:.28;9/3(
+853_443_704	181	chrM	8985	0	*	=	8985	0	TGTTCCTGTAGTATATCACTTTTTTGCCCAGGACGGTGAGACACATGAAG	7:/><:;,?:::>;>=;:>>><9@>;>8A;=?@A@=?=?<=>AA>>AA<@
+853_443_704	89	chrM	8985	37	49M	=	8985	0	GCTGCTGACCACCCACAGGTATCCACCCCTTAAACCCCCTAGAAGTCCC	K[ZHA@@A!.]]\]][]]]]]]]]]]XW]]]YT\]]ZX]]]]]]]]XY]	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:49
+853_458_262	141	*	0	0	*	*	0	0	AAGTCATCTTTCCGGGGAACCCCCCGGACCTTCCTTCTCCCAACCAAAAA	>>;>=;<4><=>5;=;>2=>:>1;<><'::8>(=:?5%<=9;29<<=-0<
+853_458_262	77	*	0	0	*	*	0	0	TTACCTGCCTCTCCCTCGCCACTTGGATCGCCGGCTGACTCTACATTACA	<;:=7:;;<8<=8;=<</<9?<9::<<:;9;;84:91#2&%,-($&&%*%
+853_458_615	137	chrM	5320	37	49M	=	5320	0	TCTTTAGATTTACAGTCTAATGCTTACTCAGCCATCTTACCTATGTTCA	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]\\]]Z]]]YY]]Y][V	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:49
+853_458_615	69	chrM	5320	0	*	=	5320	0	TTGCTGTTACTGAAGTCATACCCTAAAGCTTAGTATGCGCGTGTGTCAAG	97899::;:<<:;;;<::9;;77:;;/8:=<6;86;34;;8695;:+5:<
+853_47_795	133	chrM	649	0	*	=	649	0	CGGAAGGAGCGAATACTGAACCAACACAGGTTAACTAGGAAGAAAGTGGA	>?@;;?>=A@A9:>;:>=<;=>::88<;=8=<:95>08=5.(364,)1,)
+853_47_795	73	chrM	649	25	49M	=	649	0	CCCCGATAAACCCCACCATCCCTTGCTAATTCAGCCTATATACCGCCAT	]]\]]]]]X]]YY]]KL]]]NO][X07]]VIRZ]Z"0]]]]RKR]KF\V	XT:A:U	CM:i:0	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:49
+853_47_831	141	*	0	0	*	*	0	0	TAAAATCTCGGATGGTTGCCTTGAACAAAAAGACAGCCCCGTCAAGGGAA	5A,&5,))%(()&,13(.9<2++8,>99*(%184,=/&5+)6/)0.&)64
+853_47_831	77	*	0	0	*	*	0	0	TGGATACACGTAACAGAGGACCGGGCAGACTACTCGGGGGCCGTCGGTGG	.)/'0(,&#*#'#)#(#(#*(#'%%1.3#$-2%$&/#$(#'%'%(##%+,
+853_489_1193	117	chrM	5045	0	*	=	5045	0	CCGGGTATAATCCATAATGGCGTTTTCCACTCTGCAAATACAGTAAACAG	85@06;<>)=55>29<;?)=>:<:===>5=>=>,><=?2=?<>>>=>=<=
+853_489_1193	153	chrM	5045	25	49M	=	5045	0	GCATACTAAGGACTGCAAGACTCTATCTCACATCAATTGAACGCAAATC	RMO]UZ]]]]]\\]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:1	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:16G32
+853_489_665	141	*	0	0	*	*	0	0	ACGAGGAGATTAAAAAAAATGGGGTTAGATTAGATAAGATGAGAGGAGAG	=>?><@=A<@@<?>>=:=:=;24&&)00+&$(4:%%'(4-#+16#-'1.$
+853_489_665	77	*	0	0	*	*	0	0	GAAGAACGAGGTTTAAGATAGCGAAACCGCGACACGGACGGTAGAGTGGC	?::=-->4%&22=8)3<1;7$//6#)=(:%%<2(*,4,;7'92832:$9)
+853_557_1176	117	chrM	12324	0	*	=	12324	0	GTGGACGGTGACGGTAACCCCCAGCCTTCCCAGGAAGCATATAGTGGGGG	;,<<=95:3==7<9@?9;9><<?:=A5@>=?6;<@=8><>:9:>79>@;>
+853_557_1176	153	chrM	12324	37	49M	=	12324	0	GCTTCATCATAGCCATAGCCTGATTCCTATTCAACACCAACACATGAGA	[]]]]]]]]]]]][[]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:10G38
+853_557_600	141	*	0	0	*	*	0	0	ACACGCCGCAAGTCACAACGAGAAGGCTAGGGACAAAAGACGGAGCAAAG	7-0'%()1&'&/65'1'/+,.*&&*17165:+0#-+'.&+''$-,$-&'#
+853_557_600	77	*	0	0	*	*	0	0	TTGCCCCAAGATCGATCTTGTCCCGAAAACGTAAAGGGCCCGGTGCGAGA	&+&))(51(,1&&:'7:&)=.8),/5034&.&31&0.&-/$3'&)&1&1,
+853_558_1569	141	*	0	0	*	*	0	0	TGGGGGGAATGCGTAAAGGAGGACCATGCCTCTGAGAAACACGCGCGAGA	&&(?(?(8><;;;;<=;<7<;;8<:9;<88=<:<=::?8,6658/:,181
+853_558_1569	77	*	0	0	*	*	0	0	GCTACACACCCCCGAGCGGCCGGTGTAGTCGACGTGCGGAACGGTCGTAA	(?16:=57:=779:995@=9?<?:>3<??=?339@?@;<@3?:8>><53?
+853_558_962	181	chrM	2448	0	*	=	2448	0	CTCCCCCCTCGGGGCCCTAACCTGCCGACCTCGCCCTATCGTTTACTCCT	.)(0908:,&#6986$979'%<6.*772<<;>@=?=>;<>?=>>>==>?>
+853_558_962	89	chrM	2448	37	49M	=	2448	0	ATGTTGGATCAAGACATCCTAATGGTGCAACCGCTATTAAGGGTTCGTT	\UV]]]]TS]]]XZ]]XFN]]]\]]]]]]]]]]]]]]\]]]]]]]]]]]	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_563_1263	133	chrM	8090	0	*	=	8090	0	CTCGTACTGCGTAATATACAACCCCACGTCCGTTTGGCTTAACAGGAGCT	@A>=?A@><?=A<==@A==?>>=;==>:1<<:?=<=<;=:?=<&:3<3):
+853_563_1263	73	chrM	8090	37	49M	=	8090	0	AATCTCAATCCAACAATGGCTAGTCCAACTTACATCAAAACAAATAATA	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]\X\][VYZSFM\	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:9T39
+853_563_1776	141	*	0	0	*	*	0	0	GGTCCTGCGGGCGGTTCCCAATTTCATCTGCCCGAACATAATAGGTAACC	@=?=A>A@A>A?>@>>A@>A>?>1@>>>5@?@@8>?@&8><>97(:9:5)
+853_563_1776	77	*	0	0	*	*	0	0	ACCTTGGACCCCTCCGGCAGCATCGGACAAGACCGCTGGGTGGTCTAGGG	=A><?@A:AAA@<>AA9@==?96AA=69;<>8A3>;86&?:;6&<>7??<
+853_56_1228	181	chrM	8643	0	*	=	8643	0	CCCTGCGCCGAGCCGTCCCCCCCCCGACTGAACTCAGCAGATACTCGCAG	(-5&(2)5(/&-:%&4&9%&-.1266:=:?<<?>>;??<:==<:?=?>;@
+853_56_1228	89	chrM	8643	37	49M	=	8643	0	TAATGACCCACCAAACCCACGCCTACCACATAGTAAACCCCAGCCCATG	Y[]MKVY]]]]QT]]]YY]]]]Y]PN]]]]X]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:22T26
+853_56_1324	141	*	0	0	*	*	0	0	ACCATGTATGGAAAAAAAGAGTAGAGGAGGGAAACAATGAAAAACGGACC	/6+58//.61366638/)&988).5::15578427=88&0:>;59:(6;<
+853_56_1324	77	*	0	0	*	*	0	0	GGGCTTTAACGCGTCGGCACGAGGTAAGTGGAGTGGCGATGGCACGATTC	5,(,)5+)57+94*,*3-#*4,2&2$2'(,2)-)22/)$23/1*)24'%$
+853_584_1986	141	*	0	0	*	*	0	0	ATGCCACCGCCTTACTATCTTTTTTGCTGACATCACGCCGTCTCTTGGTG	,#$)*)(($3,))$&#,(&#*))&$##&#(%+&'+$,,$2$&(#&#+,#$
+853_584_1986	77	*	0	0	*	*	0	0	ATAGCTTAACCGAATGCTTTAATAAATTTGCTGTTCTGAGGGCGTTACAC	,:)155*-9#7,;,)'232.:1(4,7#$3#97$%$,''+$,2(##,#%#(
+853_585_1153	141	*	0	0	*	*	0	0	AAGACCAACGTAAATTATCCATTCGTACGATGCCCTGGGCATTGCATTCC	<>689<?9>59781>9956245:44?6,16=466;77615206+=12$#,
+853_585_1153	77	*	0	0	*	*	0	0	GCTCACGCCAGTACCCCAAAGGTCAAGCCTTTCAGATTCCGGCCTGGTTC	87?><89<==9>868=95:49<>7;:96<,:=;-1::::64;58/9;;)1
+853_585_542	129	chrM	580	37	49M	=	1916	1336	AGCCTAAAACTCAAAGGACTTGGCGGTGCTTTACATCCCTCTAGAGGAG	#(]]]]]]]]]]]]]]]]]]]]]]]]Y]]]]]]]]]]VV]]]Z]]YR\]	XT:A:U	CM:i:0	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:49
+853_585_542	65	chrM	1916	37	49M	=	580	-1336	AAAAGGAACTCGGCAAACACAAACCCCGCCTGTTTACCAAAAACATCAC	]]]]][]]][]]]]]]]]]]]]]]]]]YS[]]]\]]\MS]]]\TW\YTO	XT:A:U	CM:i:0	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:49
+853_611_1451	137	chrM	593	25	49M	=	593	0	AAGGACTTGGCGGTGCTTTACATCCCTCTAGAGGAGCCTGTTCCGTAAT	!S]]][TGDQ]WKRZWVRPLPYX[ZWTENZWXEFUX]PFRY[UUVS\QD	XT:A:U	CM:i:1	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:44A4
+853_611_1451	69	chrM	593	0	*	=	593	0	TAATAGCAGCATTCAACTTTCCTGACCTTTACTACTACCGAACCTATGGG	28#'%)5/,)46%-#28,4,/;00,'6,/'-;4%(#9,###:++'.9*##
+853_611_981	141	*	0	0	*	*	0	0	GCACGGCAAGCGGTACGGGATACGTGAGGCGCGGTAAGCAAACCCGATCC	;=9===@::A><;<6><=;:@8;;==8<?:<<==<<3=<&>55=9;38=;
+853_611_981	77	*	0	0	*	*	0	0	GACCTGAGCAGCAGTCGCCTGGAGCAAGCCGGCCGATATAAATCGATGCT	85275/655287&4<7<5889<176837797:835.6&44427/'48$71
+853_626_1431	141	*	0	0	*	*	0	0	ATGTAGGTCCCTGACGGCCCCACGGAGGAACCTTAGCTAGGCCAACAGAA	>5<:5897:<;4==:;7>;9;<979>89?<7;;:<9:6<49;8644.1+$
+853_626_1431	77	*	0	0	*	*	0	0	TGGGTCAATGCCCTATATGACATTAGGTTCGCGGTCGGTAACGAACAGCA	11-/8<:967:;959<<:5:<21781187057585;;*6-5$%8,2&%9$
+853_626_841	181	chrM	10675	0	*	=	10675	0	CCCACCCGCCGTTCTAGGACGGCCACATTTTTATTAAGTCAGCCGGGATC	,)4,(85:>=?6@6>=7<=<>;>=<;?=A=<>>AA>@>A<>@?@A@?@AA
+853_626_841	89	chrM	10675	25	49M	=	10675	0	CCTCCCACTCTTAGTCGCACTAATCTCTATCCAAAACCTAACAGGCTCA	R]]]XZ]]]]RLZ]]]]]]]\T]]]]]]]][]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:1	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:15T33
+853_628_1041	141	*	0	0	*	*	0	0	CTATCGCTGATTTCACAGGAATCGGTCTTATAAGTTTGACCCCTTTTTTT	<9)9<7839<:>/<<;>3'A9<36=<9$#9<8((<=8'&;97'7>;#2(8
+853_628_1041	77	*	0	0	*	*	0	0	TGAGCAAGACCCGTAATCTACAACGACCAGCGGTTATGACAATGTATAGC	978:5,7295,/889'529//,,:55227($128:'9*83,4&29&,%57
+853_628_1976	117	chrM	620	0	*	=	620	0	CGGACCCAGCAGTGTGAATCTGGGTAATCGCGCTGAGTGACAGCTCGGAA	-&-,&&$9/84359:0;=1<7:::8?>.<9<:<:8A869=?=<;9=:<@<
+853_628_1976	153	chrM	620	37	49M	=	620	0	CTAGAGGAGCCTGTTCCGTAATCGATAAACCCCGATAAACCCCACCATC	ON]][RQ]][W\]]]RR]]]YZ]\\]Z]]]]Z]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:17A31
+853_630_1363	137	chrM	2399	37	49M	=	2399	0	CGCAATCCTATTCCAGAGTCCATATCGACAATTAGGGTTTACGACCTCG	]]]]]]]]]]]]]]]]]]]]]]]]]\]]]*,[]]IEZ]]]V[]]/1\SH	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:49
+853_630_1363	69	chrM	2399	0	*	=	2399	0	ATAACAAAAGATTGAGGCCCATATTAGGTATTACCGCAAAAGGTGAGACG	A@A=AAAA>A?@><?>@AAA8=:A@:?>A89:@>?=<?=@8A;;=59@8A
+853_630_585	141	*	0	0	*	*	0	0	GGCTGGACTATGCCGATGCGCGGGCACGGAGGGATCCGGGACCGGGAGGA	&#$%#)%&#%#$$&(.##$##)-$&%%##&&.#&#$&-$#&'+'#$,,$&
+853_630_585	77	*	0	0	*	*	0	0	TAGTGTCTTGGTTCGTGTAGAAGTGCCTGGCTTAGCTAAATCGAATTGCT	15/,/(/))=&,)>,):(>:<=/,)/3>:,,49/(6)/;/',.11.+9'4
+853_648_1618	141	*	0	0	*	*	0	0	TTGATCCTATGCGGACGATTCCCGCGCTTCTGCAGTTGAGTTTTTTAAAA	1/(,/3<)+7%'/,%'&1)'09';/5.)%,)1&*111&+&5&0$4%$581
+853_648_1618	77	*	0	0	*	*	0	0	GAAAAGGGGCAGAATTTCGAGGGGAGTTAGGGCACAATCCCGCTAGCAGC	&?,//&6(=77)):,)7.)933<)4%=:-8,831885//@3@:154',&3
+853_649_292	117	chrM	1156	0	*	=	1156	0	GGAATTCCTGGAGAGGGGGGTTGGGGGGTTGAGAAAAAGGGGGGTTGGGT	::4572;408<;82=:;?::5;9=:<::98=<57:<;;>?;;=>:;;>9:
+853_649_292	153	chrM	1156	37	49M	=	1156	0	CACTTAACTAAAACATTCACCAAACCATTAAAGTATAGGAGATAGAAAT	VV]XR]\]]Z]]]]]]]]]]]]]]]]]]]]\]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_669_1548	141	*	0	0	*	*	0	0	TCGGGGACCGCCGCGCTCTGGCAGAGAGCTCCAGGGCGGGTGCCGGCAGG	8<977;>:=:;=:9><:9<;795<65>2>;;99=9/<4<8113/78,((&
+853_669_1548	77	*	0	0	*	*	0	0	TTAGCTAGACATTAAACCATCCCTCTCATCTCCGGTTAACCCCGCCAGTT	=;=<<=<<;=61:977/7;:96::<8.7<8;39:;976;;63)9;1+2:1
+853_669_616	181	chrM	8554	0	*	=	8554	0	GCCGAACATGCATGCAGGTGGTCAACTGTTCCTGTAGTATATCACTTTTG	3;>8==8=;>:A?:>A<@9>A=?=@<9<?>>A?@@>@@A>@<@>>=><AA
+853_669_616	89	chrM	8554	37	49M	=	8554	0	TTCTACTAACTATCCTCGAATTCGCAGTAGCCATAATCCAAGCCTACGT	YKKZ][YXT[\]]XZZYSM]]TNZ]WUXZ]]Z[]]]\TY]]][Z]]]]]	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:31T17
+853_678_1204	141	*	0	0	*	*	0	0	CTTAAGAGAAAACCTGCTAGCAAACAAAAATAGGGGGGGAACAGAACGAG	737,88957/39486691$92<:77<:1060:9),4&/)),)(').4+,'
+853_678_1204	77	*	0	0	*	*	0	0	GCAACCCGTACAAGTACAAGTACAAGTACAAGAACAAGAACAAGTAAAAA	)=1=89;35:6:=:6;9A<5361?>1/6/=<'/;,A=&,:&>=/(5&A7&
+853_678_1908	137	chrM	14105	25	49M	=	14105	0	ATGTCATCATTATTCCCACGTGGAATCTAACCACGACTAATGACATGAA	]]][]]URX]]]WV]]UO\]]]ZXTRYNQX]]WVPNTOVXWUSRDLWEN	XT:A:U	CM:i:1	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:37C11
+853_678_1908	69	chrM	14105	0	*	=	14105	0	TAATAGGTCGATAACGTTAGAGACGTAAGAGGAAAGTAACTGCCGTCATG	8@?:57<:::?;=><=:<?:@=?>9=@=97?;>=7<7?:66<:;:9;=83
+853_718_1061	133	chrM	1329	0	*	=	1329	0	TGTCGAATATGCATTAAATAAGACTTGGCCGACTTGAAAAGTGTTGGCTT	>A><@?@>@=>>;=<>@===<?=;>@A<=9:>;>=6==8<89:5>8>>;<
+853_718_1061	73	chrM	1329	25	49M	=	1329	0	AGAGAACTTAAGCTAAGCACCCCGAAACCAGACGAGCTACCTACGAACA	]]]]]]]]]]]]]]]]]]]]]]]]]]]]\Z]]]]]\V\]]X\ZUSU]]]	XT:A:U	CM:i:1	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:43T5
+853_719_183	141	*	0	0	*	*	0	0	TAGAGAGCACTCCAGGGGAAGGGCCCAGAATCAAATAACAACTAATAGAA	99387)&%.,./'%682&.53/$)*65-440/#%$1$##.&$##2#,%$,
+853_719_183	77	*	0	0	*	*	0	0	ATTTTAGTTTACCTTCTTGAGTTCTACCTTAAACTTTGACCTCCCACCCC	)/31.$%5'/#)',4#)'+$&7%%,&)#&&#%($$$$$%###%$'.##)'
+853_775_1932	133	chrM	5645	0	*	=	5645	0	GTTTACGCGTCCCATTTAGCTTCGCCTATTTTCCCGTGGAGTGTCACCCA	((>3,,(/7&(A,3:5('4&<<?3;/,;8=()7@=:(3556(9:>/1317
+853_775_1932	73	chrM	5645	37	49M	=	5645	0	CCCGAATAAACAACATAAGCTTCTGATTACTTCCCCCATCATTCCTACT	]QHY]Z[TDO]]]][[]]]][]]]]]]]]]]]]]]]YY]\]]ZOKZUW]	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:49
+853_776_924	141	*	0	0	*	*	0	0	GTGGGGTTAAATAGTAGAAGCGCGGACAGGTCCACGTGGAGCGCGAAGAA	88;9855?888?<.;=:54875'67+1#9661#474.5374&#1:2*%88
+853_776_924	77	*	0	0	*	*	0	0	GGATTGTTACGTGCGCCCTATACTGGAACTGACCAGTCATTGACTGGAGA	-212<+87/3582?/4731,<2(A:956/<3148*:7/28069392;:7/
+853_7_132	141	*	0	0	*	*	0	0	NNGNNNGCNGNGAANGCNTANCNCNNTANNANNNGCCGNGAGNGNANGGN	!!&!!!5#!)!)&+!2&!',!&!'!!1)!!1!!!4()$!/&,!'!'!0$!
+853_7_132	77	*	0	0	*	*	0	0	NNGGNGATGNNTGNGNNGGGNGGNGNNGGGGGGNGNGNNNNGGGGNNNGG	!!$(!,#&#!!&#!#!!#($!%$!#!!#&%#$(!#!#!!!!)(*+!!!,2
+853_7_141	141	*	0	0	*	*	0	0	NNGNNNCTNCNCCGNGGNAANANANNAGNNGNNNGGGGNGAANGNGNGGN	!!,!!!),!5!3)+!//!),!3!9!!&/!!+!!!**#)!.)(!(!(!43!
+853_7_141	77	*	0	0	*	*	0	0	NNGGNGCCGNNCANGNNGGCNAGNCNNGGACCGNANGNNNNAGGGNNNGG	!!54!9518!!1&!5!!/31!)0!6!!)533/:!5!6!!!!)/<:!!!,7
+853_7_146	141	*	0	0	*	*	0	0	NNCNNNCGNGNGCGNGANCCNGNCNNCGNNGNNNCTCCNGGTNCNTNGCN	!!1!!!33!4!#15!7(!51!1!3!!.5!!5!!!/)/,!&-/!,!.!4,!
+853_7_146	77	*	0	0	*	*	0	0	NNCGNCACCNNGCNGNNGCTNGGNGNNGGGGGGNGNGNNNNGGGGNNNGG	!!10!/240!!0)!2!!#&'!'5!(!!(.-*$3!*!4!!!!+#(.!!!.(
+853_7_269	141	*	0	0	*	*	0	0	NNCNNNGCNGNGCGNAGNACNGNCNNGCNNTNNNGGCANCCTNGNTNTGN	!!3!!!/.!+!*4,!42!)8!2!3!!62!!0!!!84;)!)7.!5!/!&%!
+853_7_269	77	*	0	0	*	*	0	0	NNCGNGGGGNNGGNGNNGGGNGGNGNNGGGGGGNGNGNNNNGGGGNNNGG	!!%&!('#%!!#*!#!!/##!&)!$!!'$',%,!%!2!!!!3,,*!!!,2
+853_7_321	141	*	0	0	*	*	0	0	NNCNNNACNGNGAGNCANCCNANGNNGGNNGNNNATTGNCCCNGNANGGN	!!$!!!&'!.!*##!6$!#1!+!#!!.+!!)!!!36(#!*5'!#!4!+(!
+853_7_321	77	*	0	0	*	*	0	0	NNGANGTGGNNGCNTNNGGGNCGNCNNCGAACGNTNANNNNGAAANNNGG	!!+$!+21(!!*-!.!!)#1!8/!9!!6,3+%6!'!,!!!!2&6,!!!&2
+853_7_386	141	*	0	0	*	*	0	0	NNGNNNTCNGNGCCNCCNTCNGNANNTCNNANNNGATANTCGNCNANGGN	!!;!!!86!=!;9=!%5!58!<!2!!62!!&!!!&3:&!//8!*!7!5*!
+853_7_386	77	*	0	0	*	*	0	0	NNCGNGTAGNNGANGNNGTCNCGNANNGAAGTGNTNGNNNNAAAGNNNGG	!!31!:7-%!!:,!-!!21,!77!)!!227:9:!2!;!!!!)',%!!!86
+853_7_405	141	*	0	0	*	*	0	0	NNGNNNAANANAAGNTCNGTNANGNNTGNNTNNNCATGNCGANGNCNGGN	!!=!!!;:!>!<8=!9<!:<!=!>!!;8!!;!!!;//1!&(&!/!'!*-!
+853_7_405	77	*	0	0	*	*	0	0	NNGCNAGGCNNTCNGNNAAANGTNGNNAGAAGGNANGNNNNATCTNNNCG	!!<8!8;==!!;>!:!!7:7!7;!8!!7:>48=!2!=!!!!536*!!!;:
+853_7_411	141	*	0	0	*	*	0	0	NNCNNNAANCNAAGNAGNCGNCNGNNGGNNGNNNCAGANTCGNGNANGCN	!!$!!!-#!#!*#+!,&!2*!#!#!!%'!!)!!!'$)$!/-#!#!'!,+!
+853_7_411	77	*	0	0	*	*	0	0	NNCANGAAANNTTNGNNAGGNAGNANNGAAGGGNGNANNNNAAAANNNAA	!!,/!13;,!!&,!+!!2/%!*1!$!!%*)+#,!,!&!!!!'-'&!!!++
+853_7_445	141	*	0	0	*	*	0	0	NNGNNNTTNANGTTNATNTCNANCNNCTNNGNNNAAGANGGGNGNGNGGN	!!&!!!0%!#!,&'!,'!$$!&!,!!&)!!'!!!..*&!#,7!1!.!10!
+853_7_445	77	*	0	0	*	*	0	0	NNTANTGCANNACNCNNCGANCCNTNNTACGGGNCNGNNNNTGGGNNNGG	!!&'!*+'#!!'%!&!!,%#!)%!(!!'##$&'!#!$!!!!$$#,!!!#$
+853_7_469	141	*	0	0	*	*	0	0	NNCNNNCANTNTCTNTTNTTNANTNNAGNNCNNNGTTTNGTANGNTNTGN	!!#!!!%%!$!))+!$,!*%!.!(!!.#!!#!!!#&##!##&!#!#!##!
+853_7_469	77	*	0	0	*	*	0	0	NNGGNACAGNNGANTNNGAANGCNANNAAGGAGNGNGNNNNAGATNNNAG	!!##!*($&!!##!#!!%))!#1!%!!(,##$.!#!(!!!!##'#!!!&$
+853_7_53	141	*	0	0	*	*	0	0	NNCNNNCGNTNAGTNGGNGGNGNGNNGGNNGNNNGGGGNGGGNGNGNGGN	!!0!!!10!)!)0)!,-!##!%!%!!##!!'!!!%+&)!%$/!)!$!/(!
+853_7_53	77	*	0	0	*	*	0	0	NNAGNCCGANNGGNGNNGTANGGNTNNATTGCGNCNCNNNNGGGCNNNCG	!!14!3.15!!47!4!!8+1!$9!(!!,..1)&!3!(!!!!1/9&!!!,3
+853_7_78	141	*	0	0	*	*	0	0	NNGNNNAGNGNGTGNGGNCCNGNGNNCGNNCNNNGGGGNGGGNGNTNGGN	!!#!!!5,!$!5&+!#8!)#!5!%!!3%!!'!!!$$8+!&)%!)!(!*#!
+853_7_78	77	*	0	0	*	*	0	0	NNCTNGGGGNNGGNGNNGGGNGGNGNNGGGGCGNGNGNNNNGGGGNNNGG	!!##!###$!!##!&!!#$&!$&!&!!%&)'#'!$!#!!!!&)*(!!!&*
+853_7_88	141	*	0	0	*	*	0	0	NNTNNNGGNGNATGNCTNGGNGNCNNGTNNANNNGCTANCTGNCNGNTAN	!!1!!!42!5!,25!24!77!4!3!!81!!,!!!5147!)/6!,!,!1&!
+853_7_88	77	*	0	0	*	*	0	0	NNGTNGGGCNNCTNGNNATTNTANCNNACAGGANCNGNNNNGGGGNNNGG	!!61!5551!!13!4!!.,)!/,!3!!.)/17+!&!5!!!!-'0.!!!,5
+853_815_1179	141	*	0	0	*	*	0	0	GCGGACTAGAGACGTCAACTAGGAGTAGCCGAGTTCAAAAGGGCAAAGGA	<'#37,/*;1;7,;45-738,(/3,+.%21:/&93('(+7#*(,8(*(&/
+853_815_1179	77	*	0	0	*	*	0	0	ATTCAATGGACTAAATCCGGGACCGAGGCGCGTCTGGCAGTCGACAGCTA	67827:>5597:=:<6<,224348025,71:879724,2(7/29)92222
+853_816_193	137	chrM	2616	37	49M	=	2616	0	AGAAGCGCCCTCAAACTAATAGATGACATAATCTAAATCTAACTAATTT	]]]]]\]]]]]]]]]]]]]]]\\\]]Y]]]]]VY][X]]Z[NL[WMQT[	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_816_193	69	chrM	2616	0	*	=	2616	0	GTGGTCTGAGTCAACCTGTAGATGTTTCGTGCACGATAACCCAGGGATTC	><><<;<@;9;>;=::>:==8<::=8>7<<:</=<8=@<?878>?<6?<6
+853_827_2017	181	chrM	5150	0	*	=	5150	0	ATTTCGAATCGCACGCGCACACAGTTCGAGGATCCTCTTAAACGTTAGCG	++6=<9;<8<7935;5480<::;<;::8;8;7994=<8?:=;8;>::8?<
+853_827_2017	89	chrM	5150	37	49M	=	5150	0	TTTTAGTTAACAGCTAAATACCCTAATCAACTGGCTTCAATCTACTTCT	FCHRRSLJSMOW\\Y[]YZOIDI][\]]]]\Y[Z\]ZUUZ[Y\]]]]]]	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_828_1138	141	*	0	0	*	*	0	0	GCACTATCGTGTGGCCCGATGTCCGGTCCTCCTCTCGGTTTTGGACCTGT	&+&&)')$#,&,#&&')&%&'/&$$'#####&##%$$###&&##&$$###
+853_828_1138	77	*	0	0	*	*	0	0	TTAAAAGTCATGAGCGTACAACACGTGCCATCTGTCCTTAATACCTATCA	&)&$&)&&&&)&&%&&&&)&'&&&%&%&&%%&#&&&&&&&&&&%$&&&#&
+853_82_2023	181	chrM	1195	0	*	=	1195	0	CTAGCTCTGTACGCGGCTTATGCGTCTCTTAGGCTCCCTAATTCTAATAC	75:5956654=71?9858;96;9>;;:?8:<=8=45762<?57<<>79;9
+853_82_2023	89	chrM	1195	37	49M	=	1195	0	AGATAGAAATTTTAACTTGGCGCTATAGAGAAAGTACCGTAAGGGAACG	XX]]VQXWSNT]]]WV]\Y]]]]]]]]]]]]W\]]]]]]]]]]]]]]]]	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:49
+853_83_197	141	*	0	0	*	*	0	0	CCGTCTCCCGCGCCGCAGAGACACTACTTCCTCGCCGCGGTGCGCCGGGC	/9;58179583997;5591<26;797=55:995$)&$'#-$(&&'(*(%&
+853_83_197	77	*	0	0	*	*	0	0	GGCAGATGATATGGACTGAGTGGGGGGGGAGGGGGGGGGGGGGGGGGGGG	8;95;6:96698;6;89:3=%(-*$&(+$&#%.''+(.-%-/5.*.*4/5
+853_843_1357	133	chrM	13593	0	*	=	13593	0	GTTTGCTAGAGTCGTATGTAGTCGTCGTTTCACGTGACCGGTCTACACCC	>:AA8=?:??:?@>@?><>8<;<:>31=>:8(=8<74=,9;?5;724>48
+853_843_1357	73	chrM	13593	25	49M	=	13593	0	TCCACGAGTAACCTCTAAAATTACCAAGACCCCAACAAGCAACGACCAA	]]]]]]]]]]]]]]]]]]]]]\]]]]]VU]]]XJQ]]\UYYXTOX]ZQN	XT:A:U	CM:i:1	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:45T3
+853_843_799	133	chrM	16042	0	*	=	16042	0	CTACACCTGCGTATCGCCTCGAAAATGCTGTCACCTTAAGCACGTTTAGG	@>>=A:AA=A9A>@4:=>:8:2?:@23;>;;9=1<=;=933'58>;9>:6
+853_843_799	73	chrM	16042	37	49M	=	16042	0	GAAGCTGGACTTAAATTGAACGTTATTACTCCGCATCAGCAACCATAAG	]]]]]]]]]]]][\]]]VT]]]YZ]]]QR]]]]W]]]UV]]]OL]]TQT	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:27C21
+853_844_231	141	*	0	0	*	*	0	0	GGGGGACAGGTGGAACTGGTAGACGGTACAAGGGAGAGCGCAGGGGATCA	4289*5)*(/(/+;=$/806&&*76&,.19&4754&2/9/92>3;)11:,
+853_844_231	77	*	0	0	*	*	0	0	TTAATTCTAGGTTTAAATGGAATTAAGATCCTGAGCCGGCCAAACCCGGG	&&8151/>,/,/8,(?<=&('(?/;8&8))<?11=39%718,$,./9*89
+853_844_634	141	*	0	0	*	*	0	0	TCGAAAGCTCAACATCATCCGGCAGGGCGTAAAACTGGTCGCCCATTGAA	>A;887A=2@9>;.;<67,;?::2:<;9#?<97/7<944:;):&*>90,6
+853_844_634	77	*	0	0	*	*	0	0	TCTATCCACCGAAGTCAGTGTCTGAAGTCTTAGACACGTTCGAAACCAAT	7#56860817:11777)66,9&>7%;188/87,9&5608#9.764682%0
+853_877_1974	141	*	0	0	*	*	0	0	GCGTCCGCAAGGCGCGGAGCCTGAGAAAATTAGCCCGCGAGAATGACTAT	76187559,719324834789;;285501;<<65:<<:9;;99=<830+:
+853_877_1974	77	*	0	0	*	*	0	0	TTGCCGTGAGGCGATTGTACCAAGATAAAAACAAAATAACCTAAAAACAA	*,*-4'#)74,',)(*##,#&#+#%##&#$'##%##)(#$%##$#(##'#
+853_878_1093	137	chrM	2417	37	49M	=	2417	0	TCCATATCGACAATTAGGGTTTACGACCTCGATGTTGGATCAAGACATC	OZ]]]Z]]YWI8J]]TJX]]N;K]]RAN]N;3@XZH9=NYH>T]UE!/X	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_878_1093	69	chrM	2417	0	*	=	2417	0	GGTTGGAGCGGGATAGCAAATGAGGATCCTGTCACAATCTCCCACTCCGA	@@/&3,(,,5533/161?@57/1,3>3<<8>53)65=1)735,1A<;:8@
+853_887_1933	181	chrM	11695	0	*	=	11695	0	GGCGCCAAGCCGTCCGACGACACTTGCGATGTGGGGACAGAGGGTGTGAA	))%,&))3#=4:=;<=:>8<:9=;?@<=<<>?A==;9<:><<<7@>>?4<
+853_887_1933	89	chrM	11695	25	49M	=	11695	0	CAAACACGGCTCTCTCAAACTTTTAAAGGATAGGAGCTATCCGTTGGTC	W\]]UJN][WZ\]]]OR]]]]]]]]]]]]]W[]]]TQZ[]JCQV\]]Y]	XT:A:U	CM:i:1	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:6T42
+853_888_1016	141	*	0	0	*	*	0	0	TGAAGACCGGGGGTCCTATGATCAACCCAACCATGAATTGTCACAGACCG	&.+/)(-#'('&5#405$2220&,/03$0+)9$(#)4%%&&-,#&#),'#
+853_888_1016	77	*	0	0	*	*	0	0	TACGGGGGAAGGGCATCCCGACGTTCAGGGCTCGGCACCACCCCAGAGGA	&(,,//6)))'<&/9&')/,,)(,&,&&9&<)/'3,),/&&)7:)(/),/
+853_943_830	141	*	0	0	*	*	0	0	AACCTACTATGCTCATGCTGGAGAAGAAAAACACCGGTGCCATCAAACCA	(>,5+''#1):,#>#10#%2:%$3&(4#.#..#*39(#':6,$'%))##4
+853_943_830	77	*	0	0	*	*	0	0	TATTTTTGGAGTACCCTCCTGTACCAATAAACGTGGCCCCGCCGGGTGCA	61)5/6,34'20)%@#)#<%#$<)6+33&6&')4&0'0*(#'215.$'9/
+853_944_156	117	chrM	2054	0	*	=	2054	0	TTCGATCAGGGTACGACTGTGGAATTTTGAGTACTGCGTCTGGGACATTG	:<3><=.:><?19>99.;>;67:>==<=A=?;::>=8<??>>>A<<==;;
+853_944_156	153	chrM	2054	25	49M	=	2054	0	TCACTTGTTCTCTAAATAGGGACTTGTATGAATGGCCACACGAGGGTTT	PV]]\XV[]]]X[]]]]]]]]XW]]]]]]]]]]]]]]]]]]]]]\]]]]	XT:A:U	CM:i:1	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:10C38
+853_946_129	181	chrM	7799	0	*	=	7799	0	ACGCCACGCAGCGTAACGGCAAGCGCGGGCTCAGCACGAGACCTTGCGCC	'&($%,4().)8%.4::%$'492/(88.$0:<,&,=7/.,7,$',:;<:8
+853_946_129	89	chrM	7799	37	49M	=	7799	0	GTGATATGCCACAGTTGGATACATCAACATGATTTATTAATATCGTCTC	ORU\]]\\V[]]]]]SS]]]]]]]]]\]]]]]]]]]]]]]\Z]]]]]]]	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:49
+853_946_1345	141	*	0	0	*	*	0	0	TGGACCCGAATCCAAGCAGCCTGCGAACAAGGTAGGCGCCTGGTTAGCCA	?A<:<<A:=<:@6<><@:=>1@=<==<4:>:=<:>985::685;:2689;
+853_946_1345	77	*	0	0	*	*	0	0	GCGCCCGCCGTCGGGCTGAAGAGGTCGGCCCCGACCGCCGTCACCACCAG	8386936:688649:8;80:8#,#/,#1#-3#,#)4)2#42)&&12'2%/
+853_967_1892	141	*	0	0	*	*	0	0	TCGGGCAGATGGCGTCAATATCCTAATCCCGCGGAGCGGGCAGTACGGAT	:>;<<<@==;<<<>;2-#8>87'9><*%=@271=A6//=;)7,;=1).:5
+853_967_1892	77	*	0	0	*	*	0	0	TATAATAGGTAAGTTCTGCTCGGAACATATTTTACCCCATTCTGCCTACC	8;64;9:878<=<9;:8>5:;9<>:;>769&;1://6&8;):1890:471
+853_968_1657	117	chrM	1985	0	*	=	1985	0	CATAACAACATTCGGTAAGGTTTGATTAAAGTCAGCTCGTTGTTGGAAAA	&%%)&')##$*,#$#$(#####,&#*%&$+##36<6<<8;99<9<88::;
+853_968_1657	153	chrM	1985	37	49M	=	1985	0	GAGGCACTGCCTGCCCAGTGACATCTGTTTAAACGGCCGCGGTATCCTA	\TZ]Z]ZTY[[[]]]]Z\]]]]]]]]]]ZY]]]\Z]]]]]]]]]]]]]]	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_968_485	141	*	0	0	*	*	0	0	GAATGGAGGCGTGCATTTGAAAACGAGGCCAGGAAACTTCAGTACAGGAA	=<:@<;:>@AA;>A9?8===<=>9<4;=7:2==9;94?@>.,;&;,=<&0
+853_968_485	77	*	0	0	*	*	0	0	CCCGGTCGTCCGTTTGCGGTAAACGGCAACACAAAAACCCCAACCTTACC	<=?;>==@<;>;<=><<?:<=?>=;?<>>=:><>=>7;>>7;8<::8:><
+853_968_835	117	chrM	7621	0	*	=	7621	0	GTGTCCGCGCCGGAGCCGATTAAGGATATTTTCCCGTATCCATGACTTAT	-986=;>48<==:<==<5<<9>::<=>>8<;>;?>><>=@:>:?<:<;A6
+853_968_835	153	chrM	7621	25	49M	=	7621	0	TACTACGGCCAATGCTCAGAGATCTGCGGATCAAACCACAGCTTTATAC	ZLCP"!ATX[NN]]]RR]]]Y[]]]\]]]]SS]]]YZ]Y]USVY]UU]]	XT:A:U	CM:i:1	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:8T40
+853_985_1608	141	*	0	0	*	*	0	0	CCTCGAGTAAGGAAGAGAGAAGGGTACGATTATAATCCTCCCAAAACGAG	@798;<9::<9;<:=?9>8;=9:97?68?=;1<:58:3/97%2)%-)#&#
+853_985_1608	77	*	0	0	*	*	0	0	TGTAAGCTATTGATTATACGCCCAGATGGACAATCGACAGGAAGGGAGGG	<:99:7<::<:>,<<;=:<97?5/:/;:2::::58<921;>:::<=19=<
+853_985_616	181	chrM	231	0	*	=	231	0	GGTGGGTTGATATCGCGTCACTTAGGGTGGTAAGGTATGGTATCACAACA	)$)($$#1&,&,#)#1&6=3;<=?;568=:;>@868@@@4>=@>>8A?@=
+853_985_616	89	chrM	231	37	49M	=	231	0	CCCCACGGGACACAGCAGTGATAAAAATTAAGCTATGAACGAAAGCTCG	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:45T3
+853_991_1890	133	chrM	3733	0	*	=	3733	0	AGGGGGGCAAGTTCAGGTTAATATATAAGTTTAGCCCAAAAATTACCTTC	>,>)&,(->>.32(<@>1&=)/:/)>/&+((>,;)3;&1>=;,%63=7:9
+853_991_1890	73	chrM	3733	25	49M	=	3733	0	ATGTCTGACAAAAGAGTTACTTTGATAGAGTAAAACATAGAGGCTCAAA	][]RO]]TDABJVW]UU]XURWUR]]]]]SO][IHW1(NUSD!!H\6$:	XT:A:U	CM:i:0	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:49
+853_992_1006	133	chrM	5367	0	*	=	5367	0	CTGAATCAATGAGCCCACCACCACCCAAATGCTACCTACAGCAGACAGAG	###(#$#$0###1(###+,'##*##%#%##&##0####$&'#*%*'%#+#
+853_992_1006	73	chrM	5367	37	49M	=	5367	0	CATCAACCGCTGACTATTTTCAACTAACCACAAAGACATCGGCACTCTG	]]YT]]W\\U]YOT]]]]]]ZV][]]RT]][Z]][]][\ZUSYTRXQPY	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:49
+853_992_1044	141	*	0	0	*	*	0	0	ACAGAGGCCCACCTGCTCACTCGGACAGCCGCCCACGATGAGCACTGCTC	:70.7143#46<257:>/,488938=96958:/75;29)715689/8(&+
+853_992_1044	77	*	0	0	*	*	0	0	TGCGTCGTGCGCTACTCCGTATTCCCCGGTAGGGGAACCTCGTAGGACGG	&/5-<)&(':4+<3838&&4&7'1-17&,/11044//$&,%8,%$4,-%#
+853_993_143	141	*	0	0	*	*	0	0	CGGGGCTCCAAGCTCCCCATCGAGAGACTGGGGTCCGTACACCAGACTCG	;759<65;<>97<::==@/8;6;6<:;85==1::;;:97<,9=937:79:
+853_993_143	77	*	0	0	*	*	0	0	CGGAACGAGGGAGTATAAGCATAGTCCCGCATCAATAGACCTATGGATTT	<788::9:8:77>3,6;<768:?:39<=:611>9751:;8:55895(>;3
+853_996_1656	113	chrM	16037	25	49M	=	1018	-15019	AAATTGAAGCTGGACTTAAATTGAACGTTATTACTCCGCATCAGCAACC	YVP/1W[[\]YY\]\\]]]]ZT[]][[]]]]\]]]\Y[[ZWY\Y\]]]]	XT:A:U	CM:i:1	SM:i:25	AM:i:25	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:32C16
+853_996_1656	177	chrM	1018	37	49M	=	16037	15019	AGTATACCGGAAGGTGTACTTGGATAACCAAAGTGTAGCTTAAACAAAG	]]]\]\]UQ]]][]]][]]]]]XW]]]]]]]]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:0	SM:i:37	AM:i:25	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:49
+853_996_488	141	*	0	0	*	*	0	0	GCGTACCTGAACTTGGCCATTAAGAGCAGAGCCACCAGTGTCGCGGGGGC	&-'*/*/8)$2(,.22&10&,))0/+,$38'(531,)2)'((%'6'(-1.
+853_996_488	77	*	0	0	*	*	0	0	TGCCCCGTCCACAAAACTCTAGACACACGCCGACCTTGGCAAAAGAAGAA	.&'6,#*<(%'8('(,8.4'.1*9)81-0(*0$&2+-)5,0/,1*21#%*
+853_997_740	141	*	0	0	*	*	0	0	GTTATCGGGGGTTTTCGCAACATAGCTTTGGTAAGCATTTCTGCACCCCT	(=('(,(,+<=3?<;::97<;::9<;8:4;<;9::=38:;?=;1<99087
+853_997_740	77	*	0	0	*	*	0	0	GGGGGGAGATCGGTCGTCCTCGCGATTCGACGTAGGGAAGGAAACCGAAC	9&5;'.1')&(4&2&(,'))=&,,-.&+,&)(.,7/2)(4/-'95,4,<3
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/bwa_wrapper_out6.sam	Fri Sep 28 13:53:48 2012 -0400
@@ -0,0 +1,203 @@
+@SQ	SN:chrX_part	LN:37500
+@RG	ID:474747	LB:lib-child-1-A	PL:SOLID	SM:child-1	DS:description	DT:2011-03-14	PI:200
+@PG	ID:bwa	PN:bwa	VN:0.5.9-r16
+427_12_390_F3	4	*	0	0	*	*	0	0	AAGGGAGTGGTGCTGGTGGGAGGCAATTTGTCGGACCTGGGAAGCGAGTC	BBB>=;@@A6<A;=>=A?>??@A58@B>9>>@?70?@<=>>@A9/5?=25	RG:Z:474747
+427_12_550_F3	4	*	0	0	*	*	0	0	CGATCTCTGCAACTTCGTGCGCAGGCGATGGGGGGGAAAATGAACGGATA	8A=?<BA@=;?A;?><B?;:5@.<:7?9;6<A62<@;8<==@3:>;=339	RG:Z:474747
+427_12_941_F3	4	*	0	0	*	*	0	0	GGGCCAAAGTAAACGCTAATCGAGGAGGACAAAGTAAGGAAGGCGCCTGT	B@72=>?A:;<:?>?94B??;3A<?1@<3=<A?8>A6?>=>7A/>=07<@	RG:Z:474747
+427_12_1018_F3	4	*	0	0	*	*	0	0	CTCTTCTCCTCCGGACTAGAGGCCCGGGCAATCAAGGCTGCGTAGACGTA	>?<;5@:>>5>7:?<7@><=:>?92<?5>=;@@>?2<?>:?<9<4>56?@	RG:Z:474747
+427_13_422_F3	4	*	0	0	*	*	0	0	AATAACGAAGCGTGTGTGTTAGCGGGAGAGCCGGGCCCCTTCCCGTACGT	9>A2,9@9<8<=;;7=7:>@1<:?37<1>1690>7=<:=A/>53.::<=/	RG:Z:474747
+427_13_494_F3	4	*	0	0	*	*	0	0	CGACTACCCCTACCGGTCACCGCTACGGTGAGGCTAAGCTCTTCCAGACG	.>>?@;A@?7?@<>39?>=7:==76;=;=65@:::9?8?3=@8=::@2<.	RG:Z:474747
+427_13_606_F3	4	*	0	0	*	*	0	0	TTTAACGCGATAATCCTTCGAAGGAAAAGAAGTGACTTTCCGTACATACC	BB?A?@A??>B@A@<=@A==A>>>>AA@7<?:B=9<@A@A@2@>8><;<=	RG:Z:474747
+427_13_861_F3	4	*	0	0	*	*	0	0	CGAGGTGCAGGCCTGCTCTGGGGACCCACTGTGACCAGGCGGCCTGCCAC	=>>@<@>BB>>58A=@A<BABA:=>@B:==?A9<AA@7::@;??:A?;2>	RG:Z:474747
+427_13_961_F3	4	*	0	0	*	*	0	0	GACGGGAGACGCTGCGATCGCACCTTAATGGGGGACCGGATGCACAAAAG	@BBBBB@BB@B>BBAB@B@AB@ABAABBA?B?B@>@@BA=A?A:<>BBB3	RG:Z:474747
+427_14_270_F3	4	*	0	0	*	*	0	0	GCAGATGCGTGGAGCAACGGTGGTCTGTAGATCGTCAGGATCTGAAACCA	A=A@?BB>@9@BAA89>A@:A@@>2@A;383B><;:;>=1=8B:<>=?8=	RG:Z:474747
+427_14_376_F3	4	*	0	0	*	*	0	0	TCACACGCAGGGCCCCGTACGGAGAATACTGCTCAATGAAAATGGAGGGG	B9??@BA@;?BB@@>AA?:?>A><=<A:4=5<?;=<?;?:95=61;<:<2	RG:Z:474747
+427_14_602_F3	4	*	0	0	*	*	0	0	GGCCGGTTGGTCGACTAGGCAGGCCGACAATGCCTGAACATACTAGGGCC	,B=7==A:9;AA45,=:9/.2<;58>9806:=>:<8=877?=9198>:2:	RG:Z:474747
+427_14_665_F3	4	*	0	0	*	*	0	0	CATACGAGGGAGTCTCTAGCATAAAGCTGGGTCCCCTGACATTGACCTGA	<A@@>B7<A5@>@>>>;<@68,9@;<-<<:>9?@?>6.A65=;=8569;5	RG:Z:474747
+427_14_1010_F3	4	*	0	0	*	*	0	0	GCTGCTGTGGCCGGGCGCACCCAGACAGGTAGAAAGCCGACTCACCACGT	@??A><@=ABA@?A?A@A??AB@AA@=<?B;<@?A<94?A=5;:@@2?@9	RG:Z:474747
+427_15_423_F3	4	*	0	0	*	*	0	0	GCTGGAGGAGAAAGGGGGGACCCGCAATCGAGCGTCCGATAATGAAATGG	>/B@=<A=??@B>A>B@@>9?@=A6@B@9?5@6A7A@>@A?=?A/@@A?=	RG:Z:474747
+427_15_646_F3	4	*	0	0	*	*	0	0	CAGTTCGCTTGGTCAATCAATATAGAGAACCTGGGGAGTAGTGTCCGGAG	?@=?>=A?@??B876:@65.B<914;;<06=?914:67997;5<:/7771	RG:Z:474747
+427_15_872_F3	4	*	0	0	*	*	0	0	CGGGTAGACTTTAGTACCTAGACGAAGGGAGTGACATGACGTCGCGTACA	<:??A@B@B==>@>A:6=?;5<::30<==63@;;1?=;A5,=7<,4;6@0	RG:Z:474747
+427_15_1039_F3	4	*	0	0	*	*	0	0	AGAGTCAACTGAAGCTTCCGAGTCGTGAACGGGGGGAGGAGAGGGAAGGC	BBB@@@B?A?ABB><A>?9=:=<:@:?>51:AA>?87>?979<>><>>=<	RG:Z:474747
+427_15_1070_F3	4	*	0	0	*	*	0	0	CTACTCCCTGCATTAGATACTGGAGCTCGGCTAGAGGGATGGCGTTAAAG	=>A<@><?BAA?A?>?4??=;>?@>??=:@<6?98==><<:;<8A:7=@5	RG:Z:474747
+427_15_1081_F3	4	*	0	0	*	*	0	0	GCTCCTCCACGATTAATCGTTGGGGTGCAATGAGAAAACAGCCAATGGCC	@=AAAB@?@>?B@?=BB@?@B=@>;B@3:?BA39?>@7==<<<A?A<1A?	RG:Z:474747
+427_16_264_F3	4	*	0	0	*	*	0	0	CCCGATCCTAGGCAGAATCGAGAGAGACCACAACCCGCGAAAACCATTGC	@<>?@@?AA?@??@>>?;:A>>A=?>=?>?:A>@@@:A8@@@:>/@>A4=	RG:Z:474747
+427_16_565_F3	4	*	0	0	*	*	0	0	AGCTATGGAATACCAAGACATCCAAGGAACTACTGCCGAAGGTTCCGGAG	BB1AABB9@@B>3>=@@,?AB<8A>@@9<=BA8<<>>4A??@:??<?6@<	RG:Z:474747
+427_16_1107_F3	4	*	0	0	*	*	0	0	TGTGTAAGTGAGACACGAGAAGCAAGAACTGATGCCCTGCAGGGTTTAGG	<+>B><:;A@B?:>>:A7B5;B@?B>8;:>8=B:B@=;@25A9A=>@1A:	RG:Z:474747
+427_17_46_F3	4	*	0	0	*	*	0	0	CCAATGAATGAAACAGGGTACCCGCGAGCGCCTGCTGAGCTGACAGTCTC	:.>A:@>@?7A@<=2?;6?;>;99=<:8;95>0:><14;@4:><:,;:8?	RG:Z:474747
+427_17_342_F3	4	*	0	0	*	*	0	0	AGCTGGAGCTGCTGCCACGGACAAGGTCGGAGCTGAGGCTGGCTGGACTA	BA?A?BB>>ABB@;;AA@@>AA>=ABB1??:B6>?>B72>@B49>?@3<<	RG:Z:474747
+427_17_446_F3	4	*	0	0	*	*	0	0	TATGCCGTGAGACGGGGGGAAACAGACCCTACCCCGATGTATAAGGCCGG	=B?>8>BA?=>B;?;>A;:<=?937;?=2;6:==;9=@3?9;51;9:149	RG:Z:474747
+427_17_917_F3	4	*	0	0	*	*	0	0	AAGACTACGCGTTAGGCCAAGAGAAAGACTCAAGAGACGACCTCTAAGAT	@@=???A6=-;A:3<@?866@94:20<11@3;19:=:/:9<<45B@:48B	RG:Z:474747
+427_17_1027_F3	4	*	0	0	*	*	0	0	CAGTGCAATGGGAGTAAAGCAAATTCGGCAGCCCGTGGCCGAACCGCTTG	A@@BAB=>B>BAA?5>=AA8:@B@;=@?@9:>BB::?@A54=B?<0<B@:	RG:Z:474747
+427_18_267_F3	4	*	0	0	*	*	0	0	CTGGCACCGAACGGAGGAAGAAATTGCGTAGATTACAGTAATCAGAAGAC	AB@A;>@A@>AAAB:8B<>>@B@A=@?=@;=A<A3>?;@@?<:>+A?;A.	RG:Z:474747
+427_18_481_F3	4	*	0	0	*	*	0	0	GGCTCGCCCCAGTATCGACGTCGTATGAGAGATGACGAGGCCCGGGCGAG	AB>?;B@A>=AAA@@@A?=6B=><=B=<8>=7A2=<==5;@5>7<=3=>;	RG:Z:474747
+427_18_706_F3	4	*	0	0	*	*	0	0	CTCTATATGGAAGGTTACTACTCAGTAACCTTAGGGACCAAGAACCGGTT	>AAA@B?BAABAAAAA@@@A?B?>=B?@>>B@6??@><@@?:?A;<?=??	RG:Z:474747
+427_18_834_F3	4	*	0	0	*	*	0	0	GGGACCCGACCTAGGACGGACAAAGACAGGGACGACAGATATACGATTCA	@@@@><?A><@A?@7@A@@6=><?;<;;7@>=?=:<:<;>=6=/:A?B?4	RG:Z:474747
+427_18_846_F3	4	*	0	0	*	*	0	0	GGACGCGTCACCAGAAAAACTAGGGGACGGTCCACGACCATGACGGGGAG	BABB>BBBB7BBA@@ABBB1<BABA<B<A89BB?21A@@22@@A?>A@=?	RG:Z:474747
+427_19_11_F3	4	*	0	0	*	*	0	0	CAGCCCACATGCACCCACTGGGAAGGCCACCCATGAGAAACTCCACGATC	=1:<4>?><;=?><1?:>?7>=>=:<=<99:><<55;>>,@=>93>/15:	RG:Z:474747
+427_19_137_F3	4	*	0	0	*	*	0	0	AAGCTGACGCTACCACGGACAACAGCGGTCAAGGCCGTCAGGCGAAGCGG	?78;?@?<>;=AA=;7?9<8;=<:<8><968;<9;:<:;::<53;=7+85	RG:Z:474747
+427_19_296_F3	4	*	0	0	*	*	0	0	CCAGAAACCTCAGCAACACACCACCTAGGCCCCCAGGGTCGGAAGATGCA	B@BABBB@BBBBAA@<AAAB>@A@?AA@?@>A=?9>?>?@@@?@=?A<@@	RG:Z:474747
+427_19_324_F3	4	*	0	0	*	*	0	0	TGGACGATTTAATGGCAGGGAAGTGAGACAAGACTGGGGTCTGCGAAAAA	A;=?3A>>:>>:<87:8483>>627=;40596=885:66>3810/843:9	RG:Z:474747
+427_19_533_F3	4	*	0	0	*	*	0	0	GAAAGCTCGATCGTTCGACTTTTCTTCGTCTGAGTCAATCAGACTTGGCA	BA@@?>@A?>A@@@@?@<=BAB?>BA?<>3B?<;@?AB?7><@@@AA6?-	RG:Z:474747
+427_19_899_F3	4	*	0	0	*	*	0	0	CATACCGTAGCCCAGGCAAGGAGACGCTCAGTGTAACAAGACGCAGTCGA	@??B>=@<A?;@5AA8=6@B<:3A>6=57@9A2?A=;:A?4>,9A7=48@	RG:Z:474747
+427_19_1049_F3	4	*	0	0	*	*	0	0	TCCGCTTGGAACATACTAAAGGAGAGTATATAGATGACCAGGAAAAGCTT	?<>@:A?@B>B=>@@?>AA?B>@@@BB35@B>98<>A5/AB><<BB>8<:	RG:Z:474747
+427_20_363_F3	4	*	0	0	*	*	0	0	GACGTCGAGATACGGTACCCGGGCTATATTTTAGACGACTTAAAACTAGA	AAAA>@B>A+BB@A7B@?<==?>=@.@9?=>A=<<1><>>>=@@?74?.@	RG:Z:474747
+427_20_407_F3	4	*	0	0	*	*	0	0	ATAACGGACACCTAAGAAGAGGGAGTTAACATCCAGCGTAGGGCGCGTAC	BBBB?BBB?ABBBBABB@>BBB?@?AB?@@2B?@;@94B@AB??;/?@>=	RG:Z:474747
+427_20_608_F3	4	*	0	0	*	*	0	0	ACAGCACGCGGCTGCAGGAGGGAGAGAGGGGCAAGACGGACGGGCCTGTG	B@9<AB?35>@>9?=AB7:@@A6<@A=>=A@@=<=?@<;:=<-<@:=0=:	RG:Z:474747
+427_20_892_F3	4	*	0	0	*	*	0	0	GACACTCCATGGGTTCGCCGTACGTCAATGCCGACTGAAGAAGCCAGAGG	A@A@?A@@>@BA?AA@>@>?B@AABB?AB:@A>?AB<BB@A@>@>>9>?=	RG:Z:474747
+427_20_982_F3	4	*	0	0	*	*	0	0	TCCCGCGCAAACATCCTGATCAAAACCATCTCCCTGACGGTGGGCTTGAT	@??>>>?98@@<36:;=:9=?:89<>9;.:7??/734:40;09.8<1834	RG:Z:474747
+427_21_328_F3	4	*	0	0	*	*	0	0	TGTGCGTCTAACCCCCCCCAGGGCGACGAGCTGGGAAGGCGTGAACAAGC	B@>>@BB;A?BB?A>AA>;8BB>:<@@<7<AB==>?><>9@A:=7A@/<=	RG:Z:474747
+427_21_334_F3	4	*	0	0	*	*	0	0	AACAGTAAACAGTAAGGGGGAGAAGGGGCTCTGGACGATGAAGAGGGGGG	AB>4>?B@84>@>@;@BA<=<A<3@?A;1=6?=8>@=?7;A=<<?<;<69	RG:Z:474747
+427_21_366_F3	4	*	0	0	*	*	0	0	CTACCCCCAGCTTTCCCCGTTGCCTGCGGCCCAGCGGTGGGGCCCATGAG	>AA?@@@@>?>B=B><B@?A@AA;B?A=7:<B<>A9>B=@<BA?B>@;?7	RG:Z:474747
+427_21_473_F3	4	*	0	0	*	*	0	0	GATGCATGGACGAACCACGCTGGGCAGGACGAATTCTACCGGGCTCGAGA	BA?<>>B:>8=B@@8=<==;@A>@;<@;=<69/=<7>5<>4?9;91;36>	RG:Z:474747
+427_21_537_F3	4	*	0	0	*	*	0	0	AAGCAGTCATAGGGAGCTAGGCGTAGAGAGCGGCTGTGCAAGTCCAGACG	AB@@@ABA:A?B@B>>AB=A@@;A?@A@?>8?A<A>=><@@4>=@@7:=9	RG:Z:474747
+427_21_563_F3	4	*	0	0	*	*	0	0	CGACAATTCTCGATCGTAGCCAGTATAAGAGACACAAATGCGAGGACTTC	>@AAAAA@?=>BAA>=A@@??>=A==@@?@<A:@>:A@@=9>@<@+>=@A	RG:Z:474747
+427_22_56_F3	4	*	0	0	*	*	0	0	GAGGCACCGTCACAAACTAACTACGTCGCTGGTTGCTCGCGATGAAGGGG	?>=>.?A@?9AB>;?7@A<<=B:;<@7=:?6:B:;3?>0@38A3??<8<<	RG:Z:474747
+427_22_692_F3	4	*	0	0	*	*	0	0	CGCGATACGAAAGGGGAATCGCCGAACCCGTAAACTAGATTAAGGGAAGA	:?;<>B>:@>A>>AAA71@=<?3>2=>?7;9<<7;?7<>9?=+=?-?=7;	RG:Z:474747
+427_22_787_F3	4	*	0	0	*	*	0	0	CGGTGGCAAGTACGCCGGTAGAGAGGGGGGGGGGGCCGGGGGGCTCATCT	<@5>:@@<76@A;;;;A7=;<><;8>A;4;>A<965+;<;<>598;6<82	RG:Z:474747
+427_22_927_F3	4	*	0	0	*	*	0	0	TCAAACAGAGTAACTTGATTGGTTCCTAAGTGGTACAAGAGGTCGAGGAA	@ABB@>?A??BAB@AB=A?B@@BB@A=@A@B<?9=?>=7<?>><9<>>?;	RG:Z:474747
+427_23_177_F3	4	*	0	0	*	*	0	0	CTGAACGGTGAACCAAGGCTGCGGCACATGCCAGGCCATTTTTGGTTATC	>A@AA@@@A>BA>@=?A@>AA<>>=@@:?=>A<=>>>2BAAA4:,A?6A8	RG:Z:474747
+427_23_740_F3	4	*	0	0	*	*	0	0	GCAATCATCAGGTTCGGACTGCCACGCAAACTCTGAGAGGATTTTCTAGA	B@@AB@<?@AA@A?@?A@?>A;@>@B;?AA=2>?@A/A=A@A@@B<??7>	RG:Z:474747
+427_23_874_F3	4	*	0	0	*	*	0	0	GGAGAACTCTAAGAAAGAACTTTAAACCAGTCTTGCCCCCCGATCGTGAA	<@ABBBAB=AABAAA@@BA<>A@@B?A??=A@B@@@B<BBB<=<@:>?>:	RG:Z:474747
+427_23_986_F3	4	*	0	0	*	*	0	0	CGGTCTGTTTTGCGGGACACGAGGTCGTGAACTAGACTGCGGGTGCATCG	@6=??@<<><>@A@:<=<;==>@;3=>8=;>::?8@?9=99=4:6@<67;	RG:Z:474747
+427_23_993_F3	4	*	0	0	*	*	0	0	AGACTCCGGGACAATGAGTCCAGCAGAGGGTGATGAAGGAACGAACGGAA	@>BAAA?BBB@?B@BA@ABAB?B?A@A?AAB@<AA?>@=AA<ABB@:@AA	RG:Z:474747
+427_24_476_F3	4	*	0	0	*	*	0	0	CAGCAGGTCCAAACGTGGATCCGCGGGCGGAGAAGGCGACACAGGGCAAA	=B>:>>A<<76===6=?;3=;<<45<=6,876968:-256;693464<<<	RG:Z:474747
+427_24_880_F3	4	*	0	0	*	*	0	0	CGTAGGTAGGCCAGGCGAGGTATTCTATCTGGGCGCAATTACCAGGAACA	AAA+AB@?;@AA?;?ABA>AB>B:=BAA+@=A>4?>A?=@4?;2>9A=1?	RG:Z:474747
+427_24_952_F3	4	*	0	0	*	*	0	0	GGTTTTTCCTTGTTCATGTGTAATCCAGTATGGAGGGCCAAAGAGAGTCC	@?B>@9?@-16=9<54:-<53=6>:2;.41/<176,>8137;5:.9=905	RG:Z:474747
+427_24_1040_F3	4	*	0	0	*	*	0	0	CCATTTTCCCAGTGAGCACCCTTGCTTCCAATCAGGGGACTGGCTCAGAA	45/2<9A@A93A7<5:;@6=<A:7=:B5740@<698=3<:8:8-:5,220	RG:Z:474747
+427_25_60_F3	4	*	0	0	*	*	0	0	TGAGGTATGGGAGTCGTAGGCGCACTCGAGGCGCCTGAGGAAACACCCTC	A/>>=?==>:>>8?:>=.=>9>84:@:96<7>6<=<93<<5;>:8==.1<	RG:Z:474747
+427_25_234_F3	4	*	0	0	*	*	0	0	TATCAAGCAACGGGTGTATGGGGGAAGAGAAAGGCGATCCCACCAGATCA	0>@</1A7<+8A64::>4<9<@88=9>94<8@:7<9=>;?8:;195:<5>	RG:Z:474747
+427_25_854_F3	4	*	0	0	*	*	0	0	AGCACTCGCGTAGACAATCGACAGCCCTGACCGAGCGAATAAGGGCTGAA	AA@BBB?AB=B@@@>=;B;@4?B9?=@B;@6A?9=<:A@A6:73@55>2>	RG:Z:474747
+427_26_256_F3	4	*	0	0	*	*	0	0	GAGGGCCGGGGGGCGATCGAAGAGTCTCGAGACGAGGCCGTGTCTCGGAA	BB=BAA@@BABB?7A2>-@@@>@?AAB=@8@?9><@>:7>@>:7@@45+8	RG:Z:474747
+427_26_331_F3	4	*	0	0	*	*	0	0	TCGCTCGCGCTAAGATACAAGGAAGCTCAACTTTTAGCGCGCATAGGCTG	=73:><A;=9?<>;/A;;:<=?276:<19;;A<7<<9<3:9:-.<<>.74	RG:Z:474747
+427_26_583_F3	4	*	0	0	*	*	0	0	CACGCGTTATGGAGCTCGGCGAGGGGACTAGGAGCAGAGTCTGCTTAGAT	AAA@ABBBB?@B@?=B;>AA?=?@A@>7A@AA>>@==@?A=B==BB7:AA	RG:Z:474747
+427_26_646_F3	4	*	0	0	*	*	0	0	AGAAACTCTGAGCCGGACCAAAATTAGGAGATCAAGAACCCCGGGAGGCC	@@AAA?A>??BB@@A?;A@=BB??:AA7=8AB:><=<==@B;:9:A:>?5	RG:Z:474747
+427_26_857_F3	4	*	0	0	*	*	0	0	TTAGCCGTCCGCTGTATCAATCCAGTGTAGTCGTCGTAAACGTAACGTAC	>A?=>@@<><=<=><@?7<9@><?:@;@8:@@;6<8>>A9=1/A??5:@.	RG:Z:474747
+427_27_160_F3	4	*	0	0	*	*	0	0	TTAAACGTATTCTAGTACCTAAAGGAAGCTGGGCTCACAACGTTTAAAAG	>>AA@@-@A?A<>A;@647A=<>9=?;:7@8;3>@2:5@<:7@?A99:?4	RG:Z:474747
+427_27_231_F3	4	*	0	0	*	*	0	0	GGCGGGCAAGGGCTGGGGATGGAGACGACTACTTTCCAAAGTCGGCATGC	ABAA?AB=>>@B>@?@@6;B@A5;@@@=8=>;:<A?@.?;<@;8=>9<5<	RG:Z:474747
+427_27_369_F3	4	*	0	0	*	*	0	0	CAATGCCCCTGAAATGGACGTACGCCTAACCGGAGCCGGCTGGGCTACGC	;3:7?@=34?A<3/@A?14<A8;4>7=31<98.0:<<54<77659?4.8<	RG:Z:474747
+427_27_778_F3	4	*	0	0	*	*	0	0	GCAAATGCCGAAGAAACAGAGAGAGGGCACGGCAGGACACCACCTAGACG	AA:=6AB=;=>?;=:@>6=;>>:8=@@=;7A@><?A@?=<???;@?===7	RG:Z:474747
+427_27_939_F3	4	*	0	0	*	*	0	0	AAGGAGGGACACAAAACCCCGGCTAATCAGAGAGCAAGGGGAGTCGTCGA	2:53=@:<@9:<?@??28>@<5:A<@>;02=6867A=<<@58->;:72/2	RG:Z:474747
+427_27_1002_F3	4	*	0	0	*	*	0	0	GATGCCGATAATTACACACCCCCAAGTGCGAAGGCAAAGGATGGCTTCCC	>?<>B<A<=?<B;;9@A9>?@A:A=<A5<3=B:;:AA==0A>3<37A>=5	RG:Z:474747
+427_28_593_F3	4	*	0	0	*	*	0	0	TGGCAGAATATTACCATCTAGAGAGAAAAGAGGGTTAGACGCAGGCTAGA	4B;?>@@==;A@=;;A?-;?@@:=?BB95><@<4AA<;>:?97<>@?<89	RG:Z:474747
+427_28_739_F3	4	*	0	0	*	*	0	0	CAGCTCCCCGCGAAGCTCTCATTACCTCGGGGTGACTACTAAACGTTGAG	6B=@AA<;=3:B?@65@8@>5A:=>@A859<>99>4A</?:;?596A348	RG:Z:474747
+427_28_798_F3	4	*	0	0	*	*	0	0	TACGTAAACCACCTCGCCCGCACTCCAAAACCGAGACCTTCCCACATCAG	B@@@@???<36?8:::<=?6-;89<;;:4994<.;5>A5:43>+>0+<11	RG:Z:474747
+427_28_923_F3	4	*	0	0	*	*	0	0	CAGCCTTGATCCTACGCTGCGCTGCCGCGAGCGTGGACGATGCTCGAGCC	?B=A?B@>A8BB@>>@>B;6>>AA;A8=:2@:::8?8>66A4?<:?4?;;	RG:Z:474747
+427_28_1127_F3	4	*	0	0	*	*	0	0	GTCCGGGACCTCTTACCCAACACAAAGGCCGAGACCCGTTGCAACTGGCG	??BBBB?@BAB@BABA@?BBA>@BBAA=?>BB>?@A=:?@9@BA@78?B-	RG:Z:474747
+427_29_95_F3	4	*	0	0	*	*	0	0	AGACGAAGTGGTGATGGGTGTAAACGGCCCGGCGTAGAGCACGCTCGAGC	?8?@>A><<:9??5????;;>@@9=<7?8<==>4@-==7;/5>1;4;;24	RG:Z:474747
+427_29_521_F3	4	*	0	0	*	*	0	0	CTCTGACGTCCCATGAACTTCGCGAAGTCACCCCGGCACAAAACGATTGC	>B<@=AA===BB>?<>B:>>@;<6>=?>/;>B?<=3@0;?>><88=;<03	RG:Z:474747
+427_29_911_F3	4	*	0	0	*	*	0	0	GTCCGCCAGTCCAGACTGGACAATTCGGACAACGGGCTGAGGCTAGGGAC	B?BA@BA@B@?AAB=?@ABB=@BBB@B>A<>@@BA<=?BA>?=@B<B<@=	RG:Z:474747
+427_29_970_F3	4	*	0	0	*	*	0	0	GAGCTCGACGCGGGCGAACAAGTGAATGCCTCGAACAGACAGAGCGGCGA	A@78BAB:>=BB9;>BA89BAA88AAB-:=@@4<<A@2:>>>.,9>B-78	RG:Z:474747
+427_29_978_F3	4	*	0	0	*	*	0	0	ACCCCAAATTTCCGCGCTTACAAACATCTGCGACAAAGATATGGTCCCGG	A?@BAB@?B?AA?B?@B@BA>ABB?A?9A@??=7@AB/A?<A?<@@@=@?	RG:Z:474747
+427_30_261_F3	4	*	0	0	*	*	0	0	AAGAGCGGCGGCCAAGAGGCTGCTATTGAAGCCTTGCCCGTTCACCACCC	A?>??A@@>?@@=@<@<??=A?>@>BA<>>>@7>?<??>>=<=<=>:;?@	RG:Z:474747
+427_30_606_F3	4	*	0	0	*	*	0	0	AGTAGGAACCTTACACACGGGAGGCAATCCCTGGCGTGAGGCTCGAGGGA	>?@8=@@:<<@A86;A=88>@?8/-<??699A929>>667<9=59>881:	RG:Z:474747
+427_30_752_F3	4	*	0	0	*	*	0	0	CGGCGGAGGCAGACGCACCATACTGCAACGGAGGAGGGCAAGATGGCGAT	@B@=?B?@>=>A.<>>;8;9@@<>;AA:;;??8:3@>:;8<=6=6:0624	RG:Z:474747
+427_30_764_F3	4	*	0	0	*	*	0	0	TTGAGACCGAGGGCAGCGCTAGAAAAGCGTGTATTCACGGGGCGAAAGGT	BB?A@@=0>3?A:=8?;98??>7=<?@/<9:A3=:=;9=8<<8:?@<9;>	RG:Z:474747
+427_30_773_F3	4	*	0	0	*	*	0	0	CGTTGCGCAAGAGAAACCGCAGCTACGGCACCGCCGTATACCTAATCCAA	<@BBB=BBB@=?@B?=A@@==@@@@=B??===@>>;>A=7A@@8<8<>>?	RG:Z:474747
+427_30_959_F3	4	*	0	0	*	*	0	0	AGGGAGACATAGCCTGCACTCCCAACCAATTTGCCACGAAATGGTCATAT	>=@@?@=?;BA@>9BA=:=BAB=;:AA;9BB?88<==;??=?79;6677@	RG:Z:474747
+427_30_983_F3	4	*	0	0	*	*	0	0	CGTCTGACTAGGACTGAGAACCTCACCCTGGGCTCTCTAGAGAGGCTCCG	>?@B?BA@A=BAB>@BAAB?B@AA=BB?@?B@A@9A:A<7B<B@>B<@@A	RG:Z:474747
+427_30_1018_F3	4	*	0	0	*	*	0	0	CAGAAAGGCCCCTAAGGCACACACCCGCATGAGGCCAGGCTACCCCAAGC	@@@AABB@B?A@;4AAA<;A?A>4AAA98BAA:9A@B=3B;A;:A>A=,B	RG:Z:474747
+427_30_1044_F3	4	*	0	0	*	*	0	0	CCCTTCGGAGGCGGACCAAGACAGCTAGGGAGGGAGAAAAAAGAAGAAAC	?BA@ABB=;AA><==AB>=@>A@=>=A?=A=A>9A7BABB@A3@A.<76+	RG:Z:474747
+427_30_1053_F3	4	*	0	0	*	*	0	0	CGCCGTGCGCTTCTATCGTGGGACGCAAGTTCCGGATGATGACAATACGT	<?A=@@ABB>BB@?@;;8A@>@??@>=A<A=9?@?9=9@<.:<BB:9<==	RG:Z:474747
+427_31_153_F3	4	*	0	0	*	*	0	0	GACAAGGAACTGCCAGGCCGGAGCGGAAGACGTACCATCATCAGCGCGGG	?>=>9AA?@;@A?;9@@:;;>>6<;?@9<<<A@8<><=8@A=>1?9>:9=	RG:Z:474747
+427_31_598_F3	4	*	0	0	*	*	0	0	GGCAGGGTCTGGCTAGCATCGGTTAAGGATCTGGGGGAAGAGAATCTACG	BBA?AB@?/-ABA=9A:1?9BA@@<8@>0<>?=<>@@=?::AA>@::99=	RG:Z:474747
+427_71_906_F3	16	chrX_part	28077	25	49M	*	0	0	CTTTGAAGCAATTGCGAATGGGAGTTCACTCATGATTTGGCTCTCTGTT	[]XNU]\]WO\]]]]]\]YX]]]]]]]]]]]]]]]W]]]]]]]]]]]]]	RG:Z:474747	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:14T34
+427_292_217_F3	0	chrX_part	14846	37	49M	*	0	0	GTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTT	]]]]]]]]]]]]]]]\]]]]]]]]]]]]]]]]]]]]]]]]]]]]\]]]]	RG:Z:474747	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+427_794_484_F3	4	*	0	0	*	*	0	0	GCTCATACGGACGAGACACCCGTTCCACGATTGAGGCCACCGGGGGGAAT	A@BAABBBA=ABBA=@@B?4<BAA4>A@81@B@26>A@+<>=?<;?BB:2	RG:Z:474747
+427_1253_1057_F3	0	chrX_part	14947	37	49M	*	0	0	TTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTTTTCATGTGTCT	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]VZ	RG:Z:474747	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:49
+427_1299_965_F3	16	chrX_part	13217	25	49M	*	0	0	GGGATGCTCTCTCTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTG	][]]]]Y]]]]Z]]]]]]]]]Z]]]]Y]]]]]]]]Y]]]]]]]]]]]]]	RG:Z:474747	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:7C41
+427_1444_687_F3	16	chrX_part	25682	37	49M	*	0	0	TCATTCTCAGCAAACTATCGCAAGGACAAAAAACCAAACACCGCATGTT	]\]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	RG:Z:474747	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+427_1522_8_F3	0	chrX_part	12254	0	49M	*	0	0	ACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCAC	)]]]]]]]]]]]]]PU]]][]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	RG:Z:474747	XT:A:R	CM:i:1	X0:i:2	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:34C14	XA:Z:chrX_part,+26921,49M,3;
+427_1891_897_F3	16	chrX_part	26846	23	49M	*	0	0	GGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATC	]]]]]]]]]]]]]]]QW]]]Z]]]]]]]]]PX]]]]]]]]]]]]]]]]]	RG:Z:474747	XT:A:U	CM:i:0	X0:i:1	X1:i:1	XM:i:1	XO:i:0	XG:i:0	MD:Z:49	XA:Z:chrX_part,-14740,49M,3;
+427_1927_689_F3	0	chrX_part	26924	0	49M	*	0	0	AGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATC	]]ZY]]]Z[]]]ZROQFMVZ]ZYUV]ZXSLTWZUT]]]]]]Z\[ZXW[T	RG:Z:474747	XT:A:R	CM:i:1	X0:i:3	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:34T14	XA:Z:chrX_part,+14818,49M,2;chrX_part,+12257,49M,2;
+428_247_467_F3	4	*	0	0	*	*	0	0	CTACCCCGCGCGAGACCCATCACACGACGTGCAATCCGCGAACCACACCG	ABAABAAAB@AAAA?>>?AA:?@A:9=>A@4;?B@<>8B>.8?A>1:<@>	RG:Z:474747
+428_385_1306_F3	0	chrX_part	27180	37	49M	*	0	0	TTTCTTGTAAATTTGTTTAAGTTTCTTGTAGATTCTGGATATTAGCCCT	]]]]]]]]]]]]]]YW]]]][]]]MN]]]]]]]]]]]]]]]]]][]]\Z	RG:Z:474747	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:23C25
+428_435_1382_F3	0	chrX_part	14761	0	49M	*	0	0	ATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATG	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]\]]]]ZJ	RG:Z:474747	XT:A:R	CM:i:1	X0:i:2	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:35C13	XA:Z:chrX_part,+26867,49M,2;
+428_589_1697_F3	4	*	0	0	*	*	0	0	CGAGTCTAGAAGAACGAAACGCGCCCCAGGCCGAAGTCTAAGGGGGGCCA	@1>B6<<;A?@?B></=B@@/>>B???5?:=<=?9:=12><:>>;:<577	RG:Z:474747
+428_615_1095_F3	16	chrX_part	28737	37	49M	*	0	0	ATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTC	]]Y]]]WY]]]]]]MX]]]]]]]]S\]]]]]]]]]]]]]]]]]]]]]]]	RG:Z:474747	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+428_628_321_F3	0	chrX_part	28192	37	49M	*	0	0	CTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACAATGGGGT	]]]]]]]]]]]]]]]]]]U]]Z[Y[]]]W\]QO\]\ZYPPVU]XY]\WU	RG:Z:474747	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+428_666_413_F3	0	chrX_part	27425	37	49M	*	0	0	CTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAACGTTTAAGTC	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]\]]][]]]]]]]]]	RG:Z:474747	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:40A8
+428_912_273_F3	4	*	0	0	*	*	0	0	TCCACCGCGAAACGGGCCCCGTCCAGAAAGAGAGCCCCGACTCCCCAGGG	BAABBBB@@BABA@BB@>??BB@A?@A=@<>@??<ABBA::@A@@@@9><	RG:Z:474747
+428_1011_1047_F3	4	*	0	0	*	*	0	0	TCGCGCCGCCCTAAAGCCCAGAGTTAAGGGACCCTGAGGGGACGTCCAGC	BB?>?BA@<>?B>=?A?>8@AB@A?A@>;=>>??@>A?==@?=6@>7;5>	RG:Z:474747
+428_1380_646_F3	16	chrX_part	3496	37	49M	*	0	0	ATAAAGAAGGTGGTTTTCAGGTCTATATTCAATGGCTCTGGTGTAATAG	]]]]]]VX][[]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	RG:Z:474747	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:49
+428_1424_131_F3	4	*	0	0	*	*	0	0	CTCTATTAGCCCATTGTCAAGGCGACAGACACACAACAATCCGACACCAT	6B7?@BB>:>AB:@BBA>>8B8;:7><<>=9<6<+>8><<?@9>05<46=	RG:Z:474747
+428_1495_1538_F3	0	chrX_part	26855	37	49M	*	0	0	GGATCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTG	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]\]]]]]]]]	RG:Z:474747	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:2G46
+428_1562_623_F3	4	*	0	0	*	*	0	0	CATGTATTTGACGGATGGTCCAAGGACGATAACCAATAATCCAGGAAAAA	;@A@BABA?AA@A<B?@?==@BA=:?@?><?>?5:==A?4:>?32:=@?<	RG:Z:474747
+428_1569_464_F3	0	chrX_part	26911	0	49M	*	0	0	GAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCT	&)]]]]]]\]]]]]]]]]]]]]]]LS]]YS]]]]Z]]]]X\]]]]]]]]	RG:Z:474747	XT:A:R	CM:i:1	X0:i:2	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:47T1	XA:Z:chrX_part,+12244,49M,3;
+428_1573_204_F3	4	*	0	0	*	*	0	0	ACAAGTCATGTGACGCAATCACTTAAGGTGCAGGTGGTGAAGCGGAGATG	B=;=ABA9:AB@;=AA44>5?;==65=2;978?:;19?/@-1=<==3?:=	RG:Z:474747
+428_1632_1017_F3	0	chrX_part	14942	23	49M	*	0	0	TTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTTTTCATG	]]]]]]]]]]]]]]]]]]Z\]]]YU]]]]]]]]RS]]]]]W]]T[TT]]	RG:Z:474747	XT:A:U	CM:i:0	X0:i:1	X1:i:1	XM:i:0	XO:i:0	XG:i:0	MD:Z:49	XA:Z:chrX_part,+27049,49M,2;
+428_1643_455_F3	4	*	0	0	*	*	0	0	TAGTCTAGGATTTCCCACACCACCGGCCAACCGGGGGTACAATGCTCGGC	A>>A>AA?;BBBAA>B@@?=AA@@<9>>@@??>A?<=<B@=75<A>;:<@	RG:Z:474747
+428_1684_1168_F3	16	chrX_part	27017	37	49M	*	0	0	CTAACTGGTGTGAGATGGTATCTCATTGTGGTTTTGATTTGCATTTCTC	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	RG:Z:474747	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+428_1691_159_F3	16	chrX_part	14618	37	49M	*	0	0	TTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGC	]TO]UY]]]]]]]]]]]]VT]]]]]]]]]]]]]]]]]]]]]]]]]]]+/	RG:Z:474747	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:49
+428_1816_859_F3	0	chrX_part	14837	37	49M	*	0	0	AGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTT	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]\	RG:Z:474747	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+428_1829_1041_F3	4	*	0	0	*	*	0	0	AATAGTGTCACATCGCGAAGGAGCCCGGATACAGAAAAACGTCGAATAAG	,??A@9AB>@5AA>A9A?=?:B=?:5A=;>8@;:89A>=92A96<4@>;9	RG:Z:474747
+428_1841_222_F3	16	chrX_part	26855	37	49M	*	0	0	GGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATGGCCACACTG	]\Z]]YV]]]]]]]][S[]]]SQ]]]]]]]]\]]]]]]]]]]]]]]]]]	RG:Z:474747	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:39C9
+428_1971_118_F3	16	chrX_part	27350	25	49M	*	0	0	TGGCTTTTGTTGCCATTGCTTTTGGTGTTTTAGACATGAAGTCCTTGCC	XX]]]]]]][Y]]\]]\]]WX]]]\]]]]\\]]]]]]]]]]]]]]]]]]	RG:Z:474747	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:7G41
+428_1978_162_F3	16	chrX_part	28066	25	49M	*	0	0	TATTTTATCCTCTTTGAAGCAATTGTGAATGGGAGTTCACTCATGATTT	]]]]]]]]SS]]]]\]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	RG:Z:474747	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:8T40
+429_320_1424_F3	4	*	0	0	*	*	0	0	ATTGAGCGGGCGAACTGCGAGCACTGATTGCGTGATAGAGGGTAAACAAT	BB?9=>B<=><BA<??@=;=:=A5=?@A>==AA48?72:<>>=??@:33=	RG:Z:474747
+429_498_1544_F3	0	chrX_part	12236	0	49M	*	0	0	GACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAA	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	RG:Z:474747	XT:A:R	CM:i:1	X0:i:2	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:1T47	XA:Z:chrX_part,+26903,49M,2;
+429_517_617_F3	0	chrX_part	27136	23	49M	*	0	0	CTGTTCATGTCCTTTGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCT	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	RG:Z:474747	XT:A:U	CM:i:0	X0:i:1	X1:i:1	XM:i:0	XO:i:0	XG:i:0	MD:Z:49	XA:Z:chrX_part,+27136,49M,3;
+429_525_1146_F3	16	chrX_part	14836	37	49M	*	0	0	CAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGT	TTXVUPQYSVYW]]]TT]]]OT]]]]]]]]]]]]]]]]]]]]]]]]]]]	RG:Z:474747	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+429_566_873_F3	16	chrX_part	28192	37	49M	*	0	0	CTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACAATGGGGT	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	RG:Z:474747	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+429_627_1289_F3	4	*	0	0	*	*	0	0	TTAGCGCCTACTGAAACTGCAGTGTCACATCGCGAAGGAGCCCGGATACA	BBBBBBA?BBBB<BBB@@A@B@?=A@>>@AA??>?>B>:=A>===??<<B	RG:Z:474747
+429_641_991_F3	0	chrX_part	27721	37	49M	*	0	0	ACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAG	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]][	RG:Z:474747	XT:A:U	CM:i:2	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:35C0A12
+429_706_923_F3	0	chrX_part	14842	37	49M	*	0	0	AAAAGTGTTCCTATTTCTCCACCTCCTCTCCAGCACCTGTTGTTTCCTG	LY]]]\]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]Y]]]]	RG:Z:474747	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:22A26
+429_820_1223_F3	16	chrX_part	27415	25	49M	*	0	0	ATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAA	[VUZ]]]]]]]]]]TT]]]]]U]]RZ]]]]]]]]]Y]]]]]]]]]]]]]	RG:Z:474747	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:9T39
+429_880_338_F3	4	*	0	0	*	*	0	0	GATGTGAACCCGGAATTCCAACGTCACTGCGGGGATTCGTTTAACCCAGG	A@A?BBAA@@?B>A@@A=?B?A8?;=A=>@@A?>?@A8;AAA=A<?<;>=	RG:Z:474747
+429_899_643_F3	4	*	0	0	*	*	0	0	CACAAAATTCACAAATGACGGTACTCAATAGCGGAATATGACTGGACGAT	?AB@6>?AB<=@AA@>@<A>=B@=>3@?@><A@@=>>?A=>;B8=@@6<<	RG:Z:474747
+429_1074_1497_F3	0	chrX_part	26923	0	49M	*	0	0	TAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACAT	]]]]]]]]]]]]VV]]]XZ]]]]]]]]]]]]]YZ]]]]]]]]\[]]][Y	RG:Z:474747	XT:A:R	CM:i:1	X0:i:2	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:35T13	XA:Z:chrX_part,+12256,49M,3;
+429_1244_262_F3	16	chrX_part	27844	23	49M	*	0	0	TTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCAT	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	RG:Z:474747	XT:A:U	CM:i:0	X0:i:1	X1:i:1	XM:i:1	XO:i:0	XG:i:0	MD:Z:49	XA:Z:chrX_part,+15141,49M,2;
+429_1264_776_F3	16	chrX_part	27356	37	49M	*	0	0	TGGTTGCCATTGCTTTTGGTGTTTTAGACATGAAGTCCTTGCCCATGCC	%!X\[]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]*	RG:Z:474747	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:49
+429_1285_1614_F3	4	*	0	0	*	*	0	0	TGTAGTTGCTACCACAGCCTAACAACACACAGACAGCGGAACTGTTACCC	A@BB?ABBBBBBBABBBB?AABBA@<BB?A@B>6@=@@;BA@@>@;?B??	RG:Z:474747
+429_1292_826_F3	4	*	0	0	*	*	0	0	CGGTGAGGCTCCCGTCAAAGGAATATCACTGCGGGCCGACCGATCACAGT	>A@A?AA>?BBB>@@;:?3>A?@??7@@;A=?<<<>=;@??<?9?7<A2A	RG:Z:474747
+429_1304_326_F3	0	chrX_part	12249	0	49M	*	0	0	GTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTC	]]]]]]]]]]]]]]]]]]]]]]]]\]]]]]]]]]]]]]]]]]]]]]]]]	RG:Z:474747	XT:A:R	CM:i:1	X0:i:2	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:39C9	XA:Z:chrX_part,+26916,49M,3;
+429_1398_1503_F3	0	chrX_part	27821	23	49M	*	0	0	TCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCAT	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]Y[]]]\]]]]X\]]\U]]]	RG:Z:474747	XT:A:U	CM:i:0	X0:i:1	X1:i:1	XM:i:0	XO:i:0	XG:i:0	MD:Z:49	XA:Z:chrX_part,-15164,49M,2;
+429_1427_1475_F3	16	chrX_part	27983	25	49M	*	0	0	TATCCTCTTTTATTTCATTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAG	]]]TOYT\]]]]]]]]]]]]]X]]]]]]]]]]]]]]]]]]]]]]]]]]]	RG:Z:474747	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:16C32
+429_1568_890_F3	0	chrX_part	13190	25	49M	*	0	0	ATTCCCTTTGAAAACTGGCACAAGACAGGGATACCCTCTCTCACCACTC	]]]]]]]]]]]QT]]]PT]]]R]]]]MS]]]]]]]]QT]]]\]]]]QU]	RG:Z:474747	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:32G16
+429_1819_792_F3	16	chrX_part	3467	37	49M	*	0	0	GTACGAAGAAAACAAAGAGCTCGGTTACCATAAAGAAGGTGGTTTTCAG	[UMBRWX]UW]]]]]]]]]]]]]TU]]]]]]]]]]]]]]]]]]]]]]]]	RG:Z:474747	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+429_1854_1258_F3	16	chrX_part	27411	25	49M	*	0	0	CTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGT	]]]][[]Z]]]]]]]]]]]]]]]]]Z]]]]]]]]]]]]]]]]]]]]]]]	RG:Z:474747	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:13T35
+429_1876_126_F3	16	chrX_part	27366	37	49M	*	0	0	TGCTTTTGGTGTTTTAGACATGAAGTCCTTGCCCATGCCTATGTCCTGA	W]Z]]]]\]]]]]]]]]]]]]]]]]]]]]]]][]]]]]]]]]]]]]]]]	RG:Z:474747	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:49
+429_1899_322_F3	0	chrX_part	27853	37	49M	*	0	0	TCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTAT	]]]]]]]]]]]]]]\]]][Z]]]]Z\]]]]]]\\VZ]]]]]]SW]]]Z\	RG:Z:474747	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:48C0
+429_1905_281_F3	16	chrX_part	26882	37	49M	*	0	0	TCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTAC	]]]][X]]]]]]]]]]]]]YX]]]X]]]]]]]]]Y]]]]]]]]]]]]]\	RG:Z:474747	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:29G19
+429_1921_1124_F3	16	chrX_part	26708	0	49M	*	0	0	TTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTG	]]]]]]]]\Y]]]]]]]]]]\]]][]]]]]]]]]]]]]]]]]]]]]]]]	RG:Z:474747	XT:A:R	CM:i:0	X0:i:2	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49	XA:Z:chrX_part,-14602,49M,1;
+429_1925_1090_F3	0	chrX_part	28003	25	49M	*	0	0	AGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAA	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	RG:Z:474747	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:45A3
+430_78_1025_F3	0	chrX_part	14935	23	49M	*	0	0	TTGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTT	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]\]]]]]]]]]]Z]]]]	RG:Z:474747	XT:A:U	CM:i:0	X0:i:1	X1:i:1	XM:i:1	XO:i:0	XG:i:0	MD:Z:49	XA:Z:chrX_part,+27042,49M,3;
+430_89_1672_F3	4	*	0	0	*	*	0	0	GGCGGAGATGTTACCCCGCGCGAGACCCATCACACGACGTGCAATCCGCG	B?B?9@B@>=A@B=>A>?A@B<@==?=?@;>7A?>53A;>32@BAB>6?;	RG:Z:474747
+430_131_637_F3	4	*	0	0	*	*	0	0	ACCAGAGTTAAGGGACCCTGATTGGACGTCCAGCCACCAAGAGCGCGAAA	8??<>>@@8B68>?9=A8?=BB<AAA>0@;@<<A<>A9B@>A8=:@=A?;	RG:Z:474747
+430_179_99_F3	0	chrX_part	14832	37	49M	*	0	0	CCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTG	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	RG:Z:474747	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+430_392_28_F3	0	chrX_part	12248	0	49M	*	0	0	GGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTT	]]]]]]]]]]]]]]]]]]]]]]]]][]]]]]]\]]]]]]]]]]]]]]]]	RG:Z:474747	XT:A:R	CM:i:1	X0:i:2	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:40C8	XA:Z:chrX_part,+26915,49M,2;
+430_491_367_F3	0	chrX_part	27259	37	49M	*	0	0	TCCCATTTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTG	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]ZX]]]UU][]]]]]ZHR]	RG:Z:474747	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+430_607_895_F3	0	chrX_part	26847	23	49M	*	0	0	GGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCG	*]]]]]]]]]]]]]]]]]\]]]]]]]]ZZ]]]]\]]]]]]]]]Z[]]]]	RG:Z:474747	XT:A:U	CM:i:0	X0:i:1	X1:i:1	XM:i:1	XO:i:0	XG:i:0	MD:Z:49	XA:Z:chrX_part,+14741,49M,2;
+430_688_525_F3	16	chrX_part	27375	37	45M1D4M	*	0	0	TGTTTTAGACATGAAGTCCTTGCCCATGCCTATGTCCTGAATGGTATGT	WW]]]]]Z]]]]]]]]]]]]\]]]]]]]]]]]]]]]]]]]]]]]]]"!]	RG:Z:474747	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:1	XO:i:1	XG:i:1	MD:Z:45^A4
+430_691_1191_F3	0	chrX_part	26852	0	49M	*	0	0	GCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACA	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	RG:Z:474747	XT:A:R	CM:i:0	X0:i:2	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49	XA:Z:chrX_part,+14746,49M,1;
+430_693_248_F3	0	chrX_part	14829	37	49M	*	0	0	CCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCAC	-]]]]]]]]]]]]]]]Z]]]]]]][]]]]]]]]]]]]]]]]]]]]]]]\	RG:Z:474747	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+430_821_1672_F3	4	*	0	0	*	*	0	0	ATCGGCTGGCGCCAAGAATGTATTTGACGGATGGTCCATCGACGGCAACC	A@?AAAAAA@=?:BA>B@>ABA?@A?B>:=@?<<:@>B=74@B;=><@65	RG:Z:474747
+430_874_1668_F3	4	*	0	0	*	*	0	0	GAGAATTAAGGAAGGGAGCTAGCGTACTAAGCATACGGACGAGACACCCG	A@AA>A@AB=@BAA@A@>@?B@=@?B@:A@?>:>A>=69@=@8A@@:/9?	RG:Z:474747
+430_900_444_F3	0	chrX_part	26504	37	49M	*	0	0	GTGATGTTCCCCTTCCTGTGTCCATGTGTTCTCATTGTTCAATTCCCAC	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	RG:Z:474747	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:11T37
+430_1055_244_F3	4	*	0	0	*	*	0	0	CGATGTTACCCCGCGCGAGACCCATCACACGACGTGCAATCCGCGAACCA	?BBBBBBBBBBBBBABB@BB@=<AB<>>B>9?<AB;:>BB@@<B?>3A@@	RG:Z:474747
+430_1080_625_F3	4	*	0	0	*	*	0	0	AGAACTAGGCCTGACACTAGCCAGCCGGGCGTCACTGCAAGGAAACTGCC	B=BBBBBBBB>BBBB@?BA@B?@AB>A@AA>A7A@B?+@7A>A?<B-=>@	RG:Z:474747
+430_1105_227_F3	16	chrX_part	27741	37	49M	*	0	0	TTTGAAGTCAGGTAGCGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGG	]]]]]]]][\]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	RG:Z:474747	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:16A32
+430_1195_1598_F3	4	*	0	0	*	*	0	0	CCTTTTTCAACAAGAGTATTTAATGCTCTGCTGTTTAAGGCCCCTCTCCC	@B@BBBBBBABBB@BBBBBBB@AA><6.=>@=5<BA4A5>@8A7B>48:7	RG:Z:474747
+430_1270_1392_F3	0	chrX_part	27268	37	49M	*	0	0	GTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGC	]]]]]]]]]]]]]]]]]]]]]]XW]]]SU]]]]]]]]]]]]]QT]]]Q[	RG:Z:474747	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:49
+430_1280_786_F3	0	chrX_part	28246	23	49M	*	0	0	AGATATACAATCATGTCATCTGCAAACAGGGACAATTTGACTTCATCTT	]]]]]]]]]]]]]]]]]]]]]]]SX]]]]]]]][]]]\RW]]]SZ]]]]	RG:Z:474747	XT:A:U	CM:i:1	X0:i:1	X1:i:1	XM:i:2	XO:i:0	XG:i:0	MD:Z:44C4	XA:Z:chrX_part,+28246,49M,3;
+430_1307_10_F3	0	chrX_part	26911	0	49M	*	0	0	GAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCT	!"]]]]]]]]]]]]]]]]]]]]]]]]]]ZR]]]]]]]]]X[]]]]]]]]	RG:Z:474747	XT:A:R	CM:i:1	X0:i:2	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:47T1	XA:Z:chrX_part,+12244,49M,3;
+430_1403_722_F3	0	chrX_part	12260	0	49M	*	0	0	TTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTC	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	RG:Z:474747	XT:A:R	CM:i:1	X0:i:3	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:28C20	XA:Z:chrX_part,+14821,49M,2;chrX_part,+26927,49M,2;
+430_1406_34_F3	0	chrX_part	26518	37	49M	*	0	0	CCTGTGTCCACGTGTTCTCATTGTTCAATTCCCACCTATGAGTGAGAAC	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	RG:Z:474747	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:10T38
+430_1531_1322_F3	0	chrX_part	26775	25	49M	*	0	0	CAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAATC	]WP]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]\\	RG:Z:474747	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:46G2
+430_1586_641_F3	0	chrX_part	28277	25	49M	*	0	0	ACAATTTGACTTCCTCTTTTCCTAATTGAATGCCCTTTATTTCCTTCTC	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]Y	RG:Z:474747	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:31A17
+430_1684_261_F3	16	chrX_part	27257	25	49M	*	0	0	TCTCCCATTCTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGC	QS]TU]]]YXVX]XJQX]]]][]YS]]]]\]]]\]]]]\]]]]]]]]],	RG:Z:474747	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:9T39
+430_1726_1548_F3	4	*	0	0	*	*	0	0	TTTTCGACGACGAAGCTGCAAAAAGACATAGGCCCGAGGAAGCGCTACAC	;BBB=9@BAA3AA@>4=A>?<A@@=8<?;@8@@>>2=>8A69>5>4<==<	RG:Z:474747
+430_1779_172_F3	0	chrX_part	25672	37	49M	*	0	0	CTGGAAACCATCATTCTCAGCAAACTATCGCAAGGACAAAAAACCAAAC	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]][[]]]]]	RG:Z:474747	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+430_1871_988_F3	0	chrX_part	14560	37	49M	*	0	0	AAGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCC	]]]]]]]]]]]]]]]]]]]]]]]TO]]]]\]]][T]]]]]]]]]][]]]	RG:Z:474747	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:1T47
+430_1994_1381_F3	4	*	0	0	*	*	0	0	GACTCGGTCTCAGATCCAGGAGACTAACCAACCTTGAGGGAAATTAAGAG	@BBBABBAB==ABB@>A@A?A@B?A>B@=?@AAAA=AA@8;ABBBAA?@8	RG:Z:474747
+431_44_655_F3	4	*	0	0	*	*	0	0	GCTATTAGCCCATTGTCAAGGCGACAGACACACAACAATCCGACACCATC	>-<=>@@4:=>@?A:>=9=::::=:5<:<66=7865<9;<59=13:+<;;	RG:Z:474747
+431_50_371_F3	4	*	0	0	*	*	0	0	CGGCCCCGTCCAGAAAGAGAGCCCCGACTCCCCAGGGCTACCAGCATAGA	=AA@@AAAABBBAB@=@9@A@A@A?>B<??AA>@;?@?@>B?6=B7@8A@	RG:Z:474747
+431_274_859_F3	16	chrX_part	14611	23	49M	*	0	0	TCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGA	]]]]XT]]]]]T\]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	RG:Z:474747	XT:A:U	CM:i:0	X0:i:1	X1:i:1	XM:i:0	XO:i:0	XG:i:0	MD:Z:49	XA:Z:chrX_part,-26717,49M,2;
+431_362_522_F3	4	*	0	0	*	*	0	0	CAGCCATAACGCGAGAAAGAAAGAGTATACGATTCAAGAATTAAGAGAGG	?B@?>ABBAA>B?A?@A@A@BA=A<8@>A?2@A@>AA?A?@<@A::779>	RG:Z:474747
+431_427_471_F3	0	chrX_part	28034	37	49M	*	0	0	CCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGA	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]WT]]]TR]]]SU]]]	RG:Z:474747	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:14A34
+431_436_304_F3	0	chrX_part	26555	37	49M	*	0	0	ATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTAC	]]]]]]]]]]]]]]]]]]]U]]]]V[]]]]]]]]X[]]]T]]]]]][]\	RG:Z:474747	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:11C37
+431_510_914_F3	16	chrX_part	1438	37	49M	*	0	0	TCCTTCTATAGAGTCTAGTTTGTGACCATATTTCTCATTCCAGAGGAAA	]]Z]V[Z]]]]]]WY]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	RG:Z:474747	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+431_524_1355_F3	16	chrX_part	28191	37	49M	*	0	0	GCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACAATGGGG	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	RG:Z:474747	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+431_753_1184_F3	0	chrX_part	27127	37	49M	*	0	0	GAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTG	Z]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	RG:Z:474747	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:23T25
+431_933_606_F3	16	chrX_part	27360	37	49M	*	0	0	TGCCATTGCTTTTGGTGTTTTAGACATGAAGTCCTTGCCCATGCCTATG	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	RG:Z:474747	XT:A:U	CM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+431_1029_654_F3	0	chrX_part	27939	37	49M	*	0	0	GATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTATCC	]]]]]]]]]]]]]]]]]]]]VK]]]]]]]]]]]]]]]]]]]]]]]]]]]	RG:Z:474747	XT:A:U	CM:i:1	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:17G31
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/bwa_wrapper_out7.sam	Fri Sep 28 13:53:48 2012 -0400
@@ -0,0 +1,422 @@
+@SQ	SN:chrM	LN:16660
+@PG	ID:bwa	PN:bwa	VN:0.5.9-r16
+853_7_53	77	*	0	0	*	*	0	0	NNAGNCCGANNGGNGNNGTANGGNTNNATTGCGNCNCNNNNGGGCNNNCG	!!14!3.15!!47!4!!8+1!$9!(!!,..1)&!3!(!!!!1/9&!!!,3
+853_7_53	141	*	0	0	*	*	0	0	NNCNNNCGNTNAGTNGGNGGNGNGNNGGNNGNNNGGGGNGGGNGNGNGGN	!!0!!!10!)!)0)!,-!##!%!%!!##!!'!!!%+&)!%$/!)!$!/(!
+853_7_78	77	*	0	0	*	*	0	0	NNCTNGGGGNNGGNGNNGGGNGGNGNNGGGGCGNGNGNNNNGGGGNNNGG	!!##!###$!!##!&!!#$&!$&!&!!%&)'#'!$!#!!!!&)*(!!!&*
+853_7_78	141	*	0	0	*	*	0	0	NNGNNNAGNGNGTGNGGNCCNGNGNNCGNNCNNNGGGGNGGGNGNTNGGN	!!#!!!5,!$!5&+!#8!)#!5!%!!3%!!'!!!$$8+!&)%!)!(!*#!
+853_7_88	77	*	0	0	*	*	0	0	NNGTNGGGCNNCTNGNNATTNTANCNNACAGGANCNGNNNNGGGGNNNGG	!!61!5551!!13!4!!.,)!/,!3!!.)/17+!&!5!!!!-'0.!!!,5
+853_7_88	141	*	0	0	*	*	0	0	NNTNNNGGNGNATGNCTNGGNGNCNNGTNNANNNGCTANCTGNCNGNTAN	!!1!!!42!5!,25!24!77!4!3!!81!!,!!!5147!)/6!,!,!1&!
+853_7_132	77	*	0	0	*	*	0	0	NNGGNGATGNNTGNGNNGGGNGGNGNNGGGGGGNGNGNNNNGGGGNNNGG	!!$(!,#&#!!&#!#!!#($!%$!#!!#&%#$(!#!#!!!!)(*+!!!,2
+853_7_132	141	*	0	0	*	*	0	0	NNGNNNGCNGNGAANGCNTANCNCNNTANNANNNGCCGNGAGNGNANGGN	!!&!!!5#!)!)&+!2&!',!&!'!!1)!!1!!!4()$!/&,!'!'!0$!
+853_7_141	77	*	0	0	*	*	0	0	NNGGNGCCGNNCANGNNGGCNAGNCNNGGACCGNANGNNNNAGGGNNNGG	!!54!9518!!1&!5!!/31!)0!6!!)533/:!5!6!!!!)/<:!!!,7
+853_7_141	141	*	0	0	*	*	0	0	NNGNNNCTNCNCCGNGGNAANANANNAGNNGNNNGGGGNGAANGNGNGGN	!!,!!!),!5!3)+!//!),!3!9!!&/!!+!!!**#)!.)(!(!(!43!
+853_7_146	77	*	0	0	*	*	0	0	NNCGNCACCNNGCNGNNGCTNGGNGNNGGGGGGNGNGNNNNGGGGNNNGG	!!10!/240!!0)!2!!#&'!'5!(!!(.-*$3!*!4!!!!+#(.!!!.(
+853_7_146	141	*	0	0	*	*	0	0	NNCNNNCGNGNGCGNGANCCNGNCNNCGNNGNNNCTCCNGGTNCNTNGCN	!!1!!!33!4!#15!7(!51!1!3!!.5!!5!!!/)/,!&-/!,!.!4,!
+853_7_269	77	*	0	0	*	*	0	0	NNCGNGGGGNNGGNGNNGGGNGGNGNNGGGGGGNGNGNNNNGGGGNNNGG	!!%&!('#%!!#*!#!!/##!&)!$!!'$',%,!%!2!!!!3,,*!!!,2
+853_7_269	141	*	0	0	*	*	0	0	NNCNNNGCNGNGCGNAGNACNGNCNNGCNNTNNNGGCANCCTNGNTNTGN	!!3!!!/.!+!*4,!42!)8!2!3!!62!!0!!!84;)!)7.!5!/!&%!
+853_7_321	77	*	0	0	*	*	0	0	NNGANGTGGNNGCNTNNGGGNCGNCNNCGAACGNTNANNNNGAAANNNGG	!!+$!+21(!!*-!.!!)#1!8/!9!!6,3+%6!'!,!!!!2&6,!!!&2
+853_7_321	141	*	0	0	*	*	0	0	NNCNNNACNGNGAGNCANCCNANGNNGGNNGNNNATTGNCCCNGNANGGN	!!$!!!&'!.!*##!6$!#1!+!#!!.+!!)!!!36(#!*5'!#!4!+(!
+853_7_386	77	*	0	0	*	*	0	0	NNCGNGTAGNNGANGNNGTCNCGNANNGAAGTGNTNGNNNNAAAGNNNGG	!!31!:7-%!!:,!-!!21,!77!)!!227:9:!2!;!!!!)',%!!!86
+853_7_386	141	*	0	0	*	*	0	0	NNGNNNTCNGNGCCNCCNTCNGNANNTCNNANNNGATANTCGNCNANGGN	!!;!!!86!=!;9=!%5!58!<!2!!62!!&!!!&3:&!//8!*!7!5*!
+853_7_405	77	*	0	0	*	*	0	0	NNGCNAGGCNNTCNGNNAAANGTNGNNAGAAGGNANGNNNNATCTNNNCG	!!<8!8;==!!;>!:!!7:7!7;!8!!7:>48=!2!=!!!!536*!!!;:
+853_7_405	141	*	0	0	*	*	0	0	NNGNNNAANANAAGNTCNGTNANGNNTGNNTNNNCATGNCGANGNCNGGN	!!=!!!;:!>!<8=!9<!:<!=!>!!;8!!;!!!;//1!&(&!/!'!*-!
+853_7_411	77	*	0	0	*	*	0	0	NNCANGAAANNTTNGNNAGGNAGNANNGAAGGGNGNANNNNAAAANNNAA	!!,/!13;,!!&,!+!!2/%!*1!$!!%*)+#,!,!&!!!!'-'&!!!++
+853_7_411	141	*	0	0	*	*	0	0	NNCNNNAANCNAAGNAGNCGNCNGNNGGNNGNNNCAGANTCGNGNANGCN	!!$!!!-#!#!*#+!,&!2*!#!#!!%'!!)!!!'$)$!/-#!#!'!,+!
+853_7_445	77	*	0	0	*	*	0	0	NNTANTGCANNACNCNNCGANCCNTNNTACGGGNCNGNNNNTGGGNNNGG	!!&'!*+'#!!'%!&!!,%#!)%!(!!'##$&'!#!$!!!!$$#,!!!#$
+853_7_445	141	*	0	0	*	*	0	0	NNGNNNTTNANGTTNATNTCNANCNNCTNNGNNNAAGANGGGNGNGNGGN	!!&!!!0%!#!,&'!,'!$$!&!,!!&)!!'!!!..*&!#,7!1!.!10!
+853_7_469	77	*	0	0	*	*	0	0	NNGGNACAGNNGANTNNGAANGCNANNAAGGAGNGNGNNNNAGATNNNAG	!!##!*($&!!##!#!!%))!#1!%!!(,##$.!#!(!!!!##'#!!!&$
+853_7_469	141	*	0	0	*	*	0	0	NNCNNNCANTNTCTNTTNTTNANTNNAGNNCNNNGTTTNGTANGNTNTGN	!!#!!!%%!$!))+!$,!*%!.!(!!.#!!#!!!#&##!##&!#!#!##!
+853_33_1583	77	*	0	0	*	*	0	0	TATGTATTTCGGTACCGCACAGANCACTCCAACCCGATAGCGTCAAGTCC	/&2%,)+,+:&#:;,5*)8/%19!,%*1/%;#<952%:27#%%&4.,#-1
+853_33_1583	141	*	0	0	*	*	0	0	CCCGCGCTCCCGATAATATAATCACCGAAACACGAAGACCAACAGGCCCA	),+&#,)',$##2$),%2'+#$)2),#$(+#+##&*%(-%1%#(##$$2,
+853_33_1649	117	chrM	7331	0	*	=	7331	0	TCACCTAATCTGCATGCAGCTCTGTCNTCATGTAGGAGTTAGAACGAAGC	%1.)#$$1%%$)#)$&);=1968:42!:8<:78;888<6688=<<9<:9<
+853_33_1649	153	chrM	7331	37	49M	=	7331	0	TCACAGTCAAAACAATAGGCCACCAATGATACTGAAGTTACGAGTATAC	XNT[[[YTQXUVKHX[]ZMOZ]SV]X]\Y[\ZVRTZ]][Y]]VNQUWSU	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:37C11
+853_34_1182	77	*	0	0	*	*	0	0	GTTAAGGGTGTTAGGGAACCCTANAAAGCCCGGGTTTCGTGGGGGCGGGC	;7;5*982;:/;,46::69<4<(!4295.6144&::<4*.-+%$#.#,(#
+853_34_1182	141	*	0	0	*	*	0	0	GGGAACATTATACGGCTTTCGCCCCCTAGACCGCACTGTGTTGGGCCGTT	>>>:9<<>><;58987;::9718859:2;75'3%(720&14%6(,51-&&
+853_34_1358	117	chrM	7792	0	*	=	7792	0	CGCCTCGAATATTGCCCTCAGATCAANACTGTTGACCCTCGGGCCAGGCC	9/8<9;6:<8=,>=<<;=<<9:><>:!9;@=:>?<=>><=>>?<=;??<<
+853_34_1358	153	chrM	7792	37	49M	=	7792	0	CTCCCTAGTGATATGCCACAGTTGGATACATCAACATGATTTATTAATA	MV]YU]YXXTZ]ZY\]]]][]]]]]]]]][[]]][WX][Z]]]]]][[]	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_35_596	73	chrM	477	25	49M	=	477	0	CGATAGCTAAGACCCAAACTGGAATTAGATACCCCACTATGCTTAGCCC	!SSNPYYYUQPS\VSSRPPZ[Z!!NXX\VXLL]]XUMKXYRTRKLV\Y!	XT:A:U	CM:i:1	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:22G26
+853_35_596	133	chrM	477	0	*	=	477	0	GGCTCCTATTTTATTACGTGTCCTTCTCAAACTGACAGCGCAATGCTAAG	>978>8=9;>;:2>;;85=3;::=;::7:8:68)<5;859>?<>:<6<58
+853_35_669	77	*	0	0	*	*	0	0	TTGTGCTGTCACGGCAAGGCGGGNGAGTTGGTGCGGCTACTCTCATCTGG	#4(,,&5,'-2(&5'10&)&-&3!,)+.*9&););:,8)7&3<&,/1:)&
+853_35_669	141	*	0	0	*	*	0	0	TTCTTATAAAACCGCTTACCCCCTAGGTCCGAACATCTTGCAGGGTCTTG	,)&#<&38':&)-2/*4-'*+,5:0(3(+.+&,)9,&%1%*'(+.+-&&'
+853_47_795	73	chrM	649	25	49M	=	649	0	CCCCGATAAACCCCACCATCCCTTGCTAATTCAGCCTATATACCGCCAT	]]\]]]]]X]]YY]]KL]]]NO][X07]]VIRZ]Z"0]]]]RKR]KF\V	XT:A:U	CM:i:0	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:49
+853_47_795	133	chrM	649	0	*	=	649	0	CGGAAGGAGCGAATACTGAACCAACACAGGTTAACTAGGAAGAAAGTGGA	>?@;;?>=A@A9:>;:>=<;=>::88<;=8=<:95>08=5.(364,)1,)
+853_47_831	77	*	0	0	*	*	0	0	TGGATACACGTAACAGAGGACCGGGCAGACTACTCGGGGGCCGTCGGTGG	.)/'0(,&#*#'#)#(#(#*(#'%%1.3#$-2%$&/#$(#'%'%(##%+,
+853_47_831	141	*	0	0	*	*	0	0	TAAAATCTCGGATGGTTGCCTTGAACAAAAAGACAGCCCCGTCAAGGGAA	5A,&5,))%(()&,13(.9<2++8,>99*(%184,=/&5+)6/)0.&)64
+853_56_1228	89	chrM	8643	37	49M	=	8643	0	TAATGACCCACCAAACCCACGCCTACCACATAGTAAACCCCAGCCCATG	Y[]MKVY]]]]QT]]]YY]]]]Y]PN]]]]X]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:22T26
+853_56_1228	181	chrM	8643	0	*	=	8643	0	CCCTGCGCCGAGCCGTCCCCCCCCCGACTGAACTCAGCAGATACTCGCAG	(-5&(2)5(/&-:%&4&9%&-.1266:=:?<<?>>;??<:==<:?=?>;@
+853_56_1324	77	*	0	0	*	*	0	0	GGGCTTTAACGCGTCGGCACGAGGTAAGTGGAGTGGCGATGGCACGATTC	5,(,)5+)57+94*,*3-#*4,2&2$2'(,2)-)22/)$23/1*)24'%$
+853_56_1324	141	*	0	0	*	*	0	0	ACCATGTATGGAAAAAAAGAGTAGAGGAGGGAAACAATGAAAAACGGACC	/6+58//.61366638/)&988).5::15578427=88&0:>;59:(6;<
+853_82_2023	89	chrM	1195	23	49M	=	1195	0	AGATAGAAATTTTAACTTGGCGCTATAGAGAAAGTACCGTAAGGGAACG	XX]]VQXWSNT]]]WV]\Y]]]]]]]]]]]]W\]]]]]]]]]]]]]]]]	XT:A:U	CM:i:0	SM:i:23	AM:i:0	X0:i:1	X1:i:1	XM:i:0	XO:i:0	XG:i:0	MD:Z:49	XA:Z:chrM,-1196,1S48M,3;
+853_82_2023	181	chrM	1195	0	*	=	1195	0	CTAGCTCTGTACGCGGCTTATGCGTCTCTTAGGCTCCCTAATTCTAATAC	75:5956654=71?9858;96;9>;;:?8:<=8=45762<?57<<>79;9
+853_83_197	77	*	0	0	*	*	0	0	GGCAGATGATATGGACTGAGTGGGGGGGGAGGGGGGGGGGGGGGGGGGGG	8;95;6:96698;6;89:3=%(-*$&(+$&#%.''+(.-%-/5.*.*4/5
+853_83_197	141	*	0	0	*	*	0	0	CCGTCTCCCGCGCCGCAGAGACACTACTTCCTCGCCGCGGTGCGCCGGGC	/9;58179583997;5591<26;797=55:995$)&$'#-$(&&'(*(%&
+853_112_119	77	*	0	0	*	*	0	0	CCTAGGATAATACGCGGACAGGGGAGCTCCGGGGGGAGGGGACGGGGCGG	7)&8327,(41&&),%1/)%+242(1,)')&15,)&05#$50,$$87&.$
+853_112_119	141	*	0	0	*	*	0	0	TCCCGGGACAACGGAATTAACAACCCCCGGGTGGAATCGGGTGGGAGGCG	))&)994&,/1(+-+.-('(02)145,.&42,#&).,&(-0.%,',%:(0
+853_112_253	69	chrM	1041	0	*	=	1041	0	GAACGCTTATGGGGTCCGCTAGCTAACGCCGCCTGGCCAATAACTATAGT	;9;97857&:;6;&983;4=83/,::2=,8;7(&<;/8+275(/9-1&(;
+853_112_253	137	chrM	1041	37	49M	=	1041	0	ATAACCAAAGTGTAGCTTAAACAAAGCATCCAGCTTACACCTAGAAGAT	WTVVUWTQYWRMT][YTWNITY]ZSW]]]RU\Z\]]]YTWVSTWX\ZM>	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:49
+853_148_1347	73	chrM	14085	37	49M	=	14085	0	ACTCAAAATAAACACAATATATGTCATCATTATTCCCACGTGGAATCTA	#$]]]]]]]]]]]]]Z[]]]][V\\[]U\[Z]KQ]YOQW]]QUYWWZTQ	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_148_1347	133	chrM	14085	0	*	=	14085	0	TAAGGCCCGTGCCGGTCCGTCCAATGATATTGGAGGAGTTCCGGAGCAAG	A=;@>>?=@@A@?A@>@A@=9?9<A@;9>>>>>7;=8<=;8;?;18?62=
+853_148_1509	77	*	0	0	*	*	0	0	GCTGGGTGAAAAGGCCCCGGCTTCACAGAATGTAATTTCTAATAGTCTTT	-'-:+&1.,)&&=(=)?7=<=4&,>:(;,&<))))8)+(,'&(4&,(,3)
+853_148_1509	141	*	0	0	*	*	0	0	TGAATGTAAATTAAACGGGAGGAAAAATCTCCCCACAATTGAGGCCTTCC	./<&1=35>,/3(6,,1<3*)7,53)69<&(A<8+(;91).8&+7(:&<7
+853_157_314	77	*	0	0	*	*	0	0	CTCGCCTGGAATTTAGCCATGGCTATGTTCTAGGTGCTTTGTTAGTTGCG	79();(1<))&2(5+&8&+.9-'198,',))&&7&:*,4)(6&2&/:&77
+853_157_314	141	*	0	0	*	*	0	0	GATAGCAAAAAAAGGGGCCGAGCGCAAAAGCCGACCTGAGCACAGACGAA	9;:5461242#)#*1####('$$$##'#%#'$$%###/$%($#'#$$#+#
+853_157_582	117	chrM	893	0	*	=	893	0	ATTTTGATATTGCCTAAGCCAGGAGGATTATGGGGTACCTGATGTTGTTG	2&==93398<:46<@<:?:==6>:<<<=?=>;;<;A;;:>;;><::??:=
+853_157_582	153	chrM	893	23	49M	=	893	0	GCTTAATTGAATCAGGCCATGAAGCGCGCACACACCGCCCGTCACCCTC	O/3]Y[12]PSUUY\]XXYZ\VY]]]]]]]]]]]][]]]]]]]]]]]\\	XT:A:U	CM:i:0	SM:i:23	AM:i:0	X0:i:1	X1:i:1	XM:i:2	XO:i:0	XG:i:0	MD:Z:49	XA:Z:chrM,-895,2S47M,3;
+853_158_402	77	*	0	0	*	*	0	0	GGTTGTTAAACCGTCCCGGGCGTTATCCACGTGTGATACCCGCGCATGTG	711&$(-)##.,&((&(4('83><-:94,'.;2&*:<0%&7,3#+02#(#
+853_158_402	141	*	0	0	*	*	0	0	TCACAGACCCGAGGAAGCTTCGTATATTTGCCACTAAGGGCGTCGGGGGA	5;&35,<55<8<6;<3646:618477::95<92=752071+2339-.#11
+853_158_569	69	chrM	6195	0	*	=	6195	0	TTCGTAATTATATTTGTCGGGCATTATGAGTACGGAGGTTATTATATAGG	8>34:8.56,9/7<=-80.562,994:)3,<#%85(,#7&%,'#3#,#%&
+853_158_569	137	chrM	6195	25	49M	=	6195	0	ATCCATTGGCTTTCTAGGCTTCATCGTATGAGCTCACCACATGTTTACA	$]\YYYQM\]\WX]\\MN][YQS[\WS\YV]]VV]]MFY\]XPSV]SGL	XT:A:U	CM:i:1	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:30G18
+853_216_501	77	*	0	0	*	*	0	0	CCCTGGCCGGTCGGGTGCGTCACGCGCCTGGCGGAGCTCCTAGCCACGCC	/>61=+11:/5/+/(&/1'%#:3&;&93(';0$4&*9,&/+))2')65.&
+853_216_501	141	*	0	0	*	*	0	0	CTTTTAATGGGTCCCTCTCTTACAAGGCTCTGTTAATTTTTCCTTTCGAA	85<85,7=47;:627;<6<4<::445934*:5<2)$9&-$273#/#6-.*
+853_216_648	117	chrM	1235	0	*	=	1235	0	CGAGGCAGCCCATTGAGTTTGGTCCCCCTTAGTTACAGGATTTCCAGCCG	+&'%(14'2,09:7(776;53=99/58>75;88784;/:8)884;7/;6/
+853_216_648	153	chrM	1235	37	49M	=	1235	0	AAGGGAACGATGAAAGATGTATTAAAAGTACTAAACAGCAAAGCTTACC	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]SU]]]YY]]]]]]]]]]]]]	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:19C29
+853_218_1907	73	chrM	1146	37	49M	=	1146	0	TACCCTTAGTCACTTAACTAAAACATTCACCAAACCATTAAAGTATAGG	YQOTRVYOS[\Z[XX]\YOS]XW]]\Z[X\ZUZWZ\XVVZQPMKWTUJ>	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:49
+853_218_1907	133	chrM	1146	0	*	=	1146	0	GAATGGCTTGACAAAGGGAGAAACGCATATCCTGTGATGTTATTTAAGAG	5).5<9?642>9+;9<;;:28=4886909479&7,3;&#9+:,6'5,(&/
+853_219_184	77	*	0	0	*	*	0	0	GCATTTGCGACCATTTTGGGGTTGGTGGGGTGGGTGGCCGGTGGGTTGGG	/&3&,)/,$)/&)2&#%(:/+#,*&$+$$(&1)/&+1##'&'#-,)&'%-
+853_219_184	141	*	0	0	*	*	0	0	CAGTAGTTGCATGAGTCATGAGGTTGGGTTGTTGGCAGCTGTTGTCGGCT	'*)%%,,##3,1+,,#'&)#+#/-),%(&+$)%#%$&(&/#&(#%#'$%$
+853_233_615	77	*	0	0	*	*	0	0	TTATGGATTAAATTTTAGCTAATTTGGCCCCTATGGATAAGGAATCCCTA	(7.1:154753447,222383647814041,3+,4.-/%+21((2)2'7)
+853_233_615	141	*	0	0	*	*	0	0	GCCTTAAATCGATATAGTCGCGGGCCCCAACCGGGCCGAGTACACTGGGC	;@),<%8)(&<(0)<&<)&53.*%/,5,6*/6;.)+>,%.,7,#,,*$%$
+853_233_834	69	chrM	8993	0	*	=	8993	0	GGGAGTTCTAGTGGAGAGATTATTCGCCGCCAGCTGCGTTGAGAGATGAA	=<<=;><:6:;<<3>=:=8>><<8;<=63;>99099&%,##&'2##%/$%
+853_233_834	137	chrM	8993	37	49M	=	8993	0	CCACCCACAGGTATCCACCCCTTAAACCCCCTAGAAGTCCCCTTACTCA	]]]]]]]]]]]]]]]]]]]]]]\\]]]]]]]]]OQ]]VY]]SOVQ\]YS	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_244_474	77	*	0	0	*	*	0	0	GATTGAGAAGGCTGCAAACGGCGAACGACCGGGCGGCCTAAAACCACGGA	)15$&/&*,&,,(&&0.,&,07:)/1/4&))96&)'/&''.(+&1'&)''
+853_244_474	141	*	0	0	*	*	0	0	CGGACAGAACGAAAACTCCTAACAACAGAGCTGAGCAAACCAATCCAGCC	*$(5.+###%$$2*+'#$('/(#*$$$$0%'$$3',$(*#&'4(%$#/$$
+853_244_781	117	chrM	652	0	*	=	652	0	GCAGCCACGAATGTCAAAATCTGGACCACTATACGGTGTCATAAATTCTT	&24)57:,,<=892<?=>;9>989@=;>;:?7><<>;=7=86>>;:9><8
+853_244_781	153	chrM	652	37	49M	=	652	0	CGATAAACCCCACCATCCCTTGCTAATTCAGCCTATATACCGCCATCTT	ZOE[\XROW[]ZQJW]I?T]]][]]]]Z]]][Y]]]]]]]]]]]]]]]]	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:49
+853_255_146	77	*	0	0	*	*	0	0	CCTATGTCCCCTGACGGCACGCCGGGTCACCGAGCCGGGCCGCGCCCGCC	5.)8&)'++7:',%'&&,(1)1/8'('%1)20#%,4-$.&$''(1(0(/7
+853_255_146	141	*	0	0	*	*	0	0	GGGAAGAGCCAGGGAGGACTGGGGCTGGAGCAAAAGAGGCGAGGGGGGCG	#$##$%###&##'#&##$###&#&$######$####%%$$/$'%$'#$$#
+853_255_403	117	chrM	13900	0	*	=	13900	0	ATCCTCAGCACATAAGTGCGTGATTACCGATTGTATCATCGCTCGGTTGT	130>7&9+9:-83?<09=>;85?>=78;<<=99;>)87;>;9;=>?<:8<
+853_255_403	153	chrM	13900	37	49M	=	13900	0	GTTGTATAACCAAAAACAACCAACATTCCTCCCAAATAAATTAAAAACA	7FFGW]]]RIS\]]YT\]SMKT\TW[\\]Z[]]]]]]][[]]YZY]]Y\	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:41C7
+853_256_428	77	*	0	0	*	*	0	0	TAATTCAAGCAGATAAAAGAGTGTGCGCCCACCCTCCAAGGAAATAGAAA	2=<66<=>6::3<,8;>:3<3825,:1:98897,057::24<986:+,::
+853_256_428	141	*	0	0	*	*	0	0	ACGAAGCGGTGTACCTGGCCCTACGCGGAAAGGGGGAAACCTTCCCAAAT	@?8<A:A969=<:71?;;<5==>81><1<&??:264@>>/=<-819><()
+853_256_834	117	chrM	9813	0	*	=	9813	0	GCCCTCTGGCAAACCTACGGTAAGTTTGCCATGGAATCTTTGGCGACATT	######$$##############$#&####$&$##&##########)#&%'
+853_256_834	153	chrM	9813	37	49M	=	9813	0	TGAACCCAAAAAGGGCTAGAATGAACTGAGTATGGTAATTAGTTTAAAC	DL]TAFU]\TDH]]]WZ]\NU\VZVU\]]]Z]]Z\\Z]]]]WZ]]]WWX	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:14A34
+853_266_697	89	chrM	1002	37	49M	=	1002	0	AAGTCGTAACAAGGTAAGTATACCGGAAGGTGTACTTGGATAACCAAAG	]]]SQVY]]\]Y[ZY][]]]]]]]\]]]]]]]]]]]]]]]]]]]]]]]#	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_266_697	181	chrM	1002	0	*	=	1002	0	CAAGTCCACTTATATATGCGCATCGGGTTTTTGGTGGAAGGTTGTCATGT	::<;9796:::;9;;;<4>=2=;<;?=>?=;==?><6;:<:<>=@>;<=?
+853_266_1092	77	*	0	0	*	*	0	0	GAGCCGGAACGAGACAACCCGTTCTTAACATCCACCACGCGTGGGCGACG	;)2))/8%'10:712<67<3(39</68/5)6&')/170&49)6)//,)&&
+853_266_1092	141	*	0	0	*	*	0	0	GGCGCGGATTATTGTCTTAGCTTTGCTACCGTTATATGCGCTTGTCTTGT	,318925,37;9,999<52622989/:7220#3$247,',*1'##,1,#5
+853_279_1056	77	*	0	0	*	*	0	0	TGTGCTCTTCCGTCATAAGAGAACCTTAAGCTATCACGGACACAGCGCCG	:;76;:=;:<7::;<<<3<76;:<9=<5;87=3<=5@3<7388771:;5<
+853_279_1056	141	*	0	0	*	*	0	0	TGGAGGGTACGATTAGAAGAGGAGGCGGTACAAATAGACAATTCCTCACT	=<;<<=;><:>;=<<=>=:<<>=;<;=;<==8<87<7@8=<9<9;:1:3:
+853_279_1330	117	chrM	8561	0	*	=	8561	0	CTTTTTCCTTCCCTTGCTTCGGTGAGCATGAGTTGCCTTCCGTTTTTTAT	7%,117%%154#2639#1#,5'+)23%($$1#$#1<$&>-<-'9)4).<+
+853_279_1330	153	chrM	8561	37	49M	=	8561	0	AACTATCCTCGAATTCGCAGTAGCCATAATCCAAGCCTACGTATTCACT	JI[VXUU]]][\]]]WW]]]]\]]]]]]]]V]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:24T24
+853_292_158	77	*	0	0	*	*	0	0	AATGTGCGTTTAAATATTCGGTCTTGGATGCTGATCAGCTAAAACGTATG	;=;;9;>>89=><94<;>9:;:896;;<8;3<<177=:5<6=:73<:9'9
+853_292_158	141	*	0	0	*	*	0	0	AACTTTTCTGGCATTTGAGCGCGTTTTGGAACTGACGAACAGATGCTCCT	===9<<;<=<<>:<:=<>::7=9<=:;9:>;;98=58>;>4=@;:,;=1=
+853_292_700	117	chrM	2055	0	*	=	2055	0	CCCCACCACACCAGCCCCCCAAGCTTATACCCCGTACTCTCCTCATTACC	5.&/,#/++%):4'*/66:/.<6:82<6715=74+&>;<8:;>;=9<;9=
+853_292_700	153	chrM	2055	25	49M	=	2055	0	CACTTGTTCTCTAAATAGGGACTTGTATGAATGGCCACACGAGGGTTTT	U[XVKS\MRZS\]ZTXZX]WT[[]]]ZUUT]]]]WVZ]]]]]]\ZUU\&	XT:A:U	CM:i:1	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:9C39
+853_365_890	77	*	0	0	*	*	0	0	TGTGGGGGGGGAAGGGCGTCCGGCTAACGTCTCGGCGGGTGCGGGGGGGG	<:7:=<;;;<9==><<;9<>:;>>;:;7<;<68(-#6+1&5,(4'2'.*2
+853_365_890	141	*	0	0	*	*	0	0	AGAAGTCCGGGCGTAGTGTATCCGAGGGGCAAAAACTCTAACAACGGACT	=9?=>7:9;A=9==??:<8?<=9@6<:>>8<?=>:=6:=<?8;<398:8)
+853_365_1447	117	chrM	5643	0	*	=	5643	0	ACCATTGGATTAGGCAGCCGTGGGGCATACTCATACGGTCTGACAACCAT	$###$#$#(##&$&#8$277:3079<60;993;8;5+97=7)9:;:(7<6
+853_365_1447	153	chrM	5643	20	49M	=	5643	0	TCCCCGAATAAACAACATAAGCTTCTGATTACTTCCCCCATCATTCCTA	NJUSYMK[RT[XXTY\ZZOT]]]XX\Z[XY]]]]]]]]]]]]]]]\]][	XT:A:U	CM:i:1	SM:i:20	AM:i:0	X0:i:1	X1:i:2	XM:i:2	XO:i:0	XG:i:0	MD:Z:0C48	XA:Z:chrM,-5642,1M1D48M,2;chrM,-5644,1S48M,3;
+853_368_1718	73	chrM	1149	37	49M	=	1149	0	CCTTAGTCACTTAACTAAAACATTCACCAAACCATTAAAGTATAGGAGA	(]Z\]SR]]]\Z]]]]]]]]]]]]]]][]]]]]]]V]]]WW]]]SO[[X	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_368_1718	133	chrM	1149	0	*	=	1149	0	CTCCCCTCTCAGCTTGATTCCAAACGCCGGGATCTAAGGGTAATGTTCCG	;;A>A>?A;@@<><9A;6:?A:=1><<A@6=5515A<>8397:@1<6<3:
+853_369_74	77	*	0	0	*	*	0	0	AGCCACGGATCAGAGGGGGAACGATGGTATAGGAAGGGATAAGTCGGGGA	7:9875:8:7<69;78.$2/9&)6%0-$5)96&879'$8,&(/))6*2&(
+853_369_74	141	*	0	0	*	*	0	0	GGGTTCAAGCATGGGAAGTGGACCACAGCTCCCGACGGTCCACACCATCA	=9756::884:54:791:47358965758589965&:94,&969;(5143
+853_375_367	77	*	0	0	*	*	0	0	CCGATTGTCTTTCTGAGCGCACCGAATCAAGGTATCTACTAGCATAGCAT	'+);,18&&&''),2&))4,%/1&5.1+-'/,'-1()))&'*)'+)&/&)
+853_375_367	141	*	0	0	*	*	0	0	GTTTTTTGGCGCGAGGTTTGCGCAGAAGGGCAAATTCCGGCAGCGTCGCG	5&')&(9<1,=?>:+,)6)&7,&(05/)1,',(0'&),&(6/7,,5,,44
+853_375_856	69	chrM	883	0	*	=	883	0	GTTTACTTGAGTACATCCTCAAGACTGTCTTATGCCGAGGCTGCCTTTGA	8<;;>??83=>;63:@:?9=@<=>8@:?5?>8=1?;98;9<>4&40&2(%
+853_375_856	137	chrM	883	37	49M	=	883	0	AGAATAGAGAGCTTAATTGAATCAGGCCATGAAGCGCGCACACACCGCC	]]]]]]]]]]]Z]]]]]]]]]]]]]]]]]ZTV]]]]]]]\[]]]][]UQ	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_381_1334	89	chrM	556	37	49M	=	556	0	ATTCGCCAGAGTACTACTAGCAACAGCCTAAAACTCAAAGGACTTGGCG	WLNHN\]]]]]]]]]]]]]]OJ]]]]]]]]]]]]]]]]\]]Z]]]]]]'	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_381_1334	181	chrM	556	0	*	=	556	0	CCCCATCATACCACATAACACCACCAAGGCTCAAGGTGTCTTAATACCCA	*%-#&2+,%&#2'%#,&%&.%7;';=?>%=<?>68:?@,;=?>%)4@>=@
+853_381_1648	77	*	0	0	*	*	0	0	TTGCAGACTAGTTTCCAGGTATATTTTTCAAAGCCTTATTTTCTTTTTTT	986+0<95:8;(>5<<)58?,4)8;<5&,9/),()35)-3&7(&832$&/
+853_381_1648	141	*	0	0	*	*	0	0	AGAAACGATCACAAATAACCCAAGTCTCGCCAAGAGAGCTTGATCCGAGA	8:9:;<;::::;65&:178(:8:517:35$3385)958.$<578%7:7.)
+853_383_962	89	chrM	865	25	49M	=	865	0	GGATTTAGTAGTAAATTAAGAATAGAGAGCTTAATTGAATCAGGCCATG	O\]SGKS[[MJ]]Z10[]WHG]]WQT]]]HI\\YBDWTW]XU\]]VY]]	XT:A:U	CM:i:1	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:8C40
+853_383_962	181	chrM	865	0	*	=	865	0	GGCCAATTATTGCAATGGTATGTTGTGGGGCTGGGGAGGTTGAATCTCTG	5*;3<8)659?)@>?:(99>:7==<?5?;A=:<2>A<;:==<=:>;9??@
+853_383_1666	77	*	0	0	*	*	0	0	AGCGTCTTACAGACCCAACTTGAAGCTTGCAGGAAGGGGCAAACCAAACA	,,('6:.6-&7,(=15&%&<&&1(/16',.(1&&8($$&&+&)76,5815
+853_383_1666	141	*	0	0	*	*	0	0	AACCACTGAGTACGTAGGCGGTGCAACCGAACCCCGAGTATTACCTACTG	18$+&,#./,8#8('./99#4(58);.22,;,2,%6,%)(,.,*957)('
+853_389_1983	77	*	0	0	*	*	0	0	TACCGTCTTTCGATTGACCGGTCGGTCGGGGGCCGGGTGTCCGGTTCCGG	,&9):88.&'&&/.&4&%4(6#$4531,)66,.2-51#'2/&'5845,8.
+853_389_1983	141	*	0	0	*	*	0	0	TGGAGCTACACCATCCCCTTAGGAGGGGGAAAACGTGGGGTGACGTGGCG	715;6741498/6459/6448/6573'569<98845/6:9$),4%.560(
+853_390_660	69	chrM	1251	0	*	=	1251	0	CTAAGGCAACGTATTGGTCGCCTTATGGTAATGGTACGTATAATTAGGCT	>8A==;<<<>;;A98<;:<=>;9;=;;;;>;8<;;@5;:81=:894;:),
+853_390_660	137	chrM	1251	37	4M1D45M	=	1251	0	GTGCTTAAAAGTACTAAACAGCAAAGCTTACCCCTTTTACCTTTTGCAT	]]]!%\W]]Z]]]]]YW][ZY]]]]WU\]]]\]Y\]]\V]23]]]HFRS	XT:A:U	CM:i:2	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:1	XG:i:1	MD:Z:0A3^A45
+853_392_1916	77	*	0	0	*	*	0	0	GCGCCGGGGTACAGTGCAAGCGCGAACGAGACGAATTTGGGGAGGGCACT	:<=<<<>>;>9<28A;<:*;:=95889<.:8;>34;6)%+6;05&::1+1
+853_392_1916	141	*	0	0	*	*	0	0	GATGCATATCCTGCAAAGCACCAAGGATGGAAATTTGCGCTAAATAAGCC	@;@A?>A;?@A>@@<=9A>??=<;A@9>A?=:;?=>;?<<?;<962&6):
+853_393_183	69	chrM	660	0	*	=	660	0	TCAGGATGGCCGTAATAATGGTGGCGTACACGCGCAAATTCCTTATGCGG	=>;<<=*;4-;+9':>$427:&972<)71=;*793<1<1:;:7/9=)7/;
+853_393_183	137	chrM	660	37	49M	=	660	0	CCCACCATCCCTTGCTAATTCAGCCTATATACCGCCATCTTCAGCAAAC	]ZZ]\[]]]]]]]YZ][[[]]Y]]]]]]]]][]XV]]SGT\ULSXY]Z[	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_397_1746	89	chrM	9541	25	49M	=	9541	0	CGCTACTCGTACTCATCGCATTCTGATTACCACAACTAAACATCTATGC	DF8=*%8:ORJJNQOMD>LLOWUYMGGIQFNYV]SKPU]]VJGMFFVPJ	XT:A:U	CM:i:1	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:26C22
+853_397_1746	181	chrM	9541	0	*	=	9541	0	GTCGTATTCCTTCCTTGCAGATATGTCATACATCCCTGCAATCAGACGAG	,5,+2.4.7/><1:777)5;78/97?:0<582/9<880;8;98;:7987?
+853_398_593	77	*	0	0	*	*	0	0	AATTTAACGTATGCGGTTTTCTCTTCTCAATCCTCACACCGGTAAGAACA	(=714-?,:<,91)717878<7/9396=51,<<=,)/;8=5,:/8;7813
+853_398_593	141	*	0	0	*	*	0	0	GACCCGTGGGCTCCACTGGTCAACGCCGTCCTATATGGCGGACTAGTCCT	(,1&31,+//,&1?0,)(>91),,7(/0(1(3=/1>/)&83:5336:3-3
+853_423_1430	73	chrM	8093	37	49M	=	8093	0	CTCAATCCAACAATGGCTAGTCCAACTTACATCAAAACAAATAATAGCT	W]]]]]]]]]]]]]]]]]][\]]]]]]]]\Z]]]YW]]TKTO>=D?KXK	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:6T42
+853_423_1430	133	chrM	8093	0	*	=	8093	0	CGGAGAACCCACCCGAGAGACATAGGGGCGAGATTCACCTGCTTTTTAGG	>>5:<8<A<=:<=@<=5?:/=:8;7:=9<<87:<897:7891.=%;8/7;
+853_424_115	77	*	0	0	*	*	0	0	CCCGATACAGACCATGCGAATCGAGACGGGCTGTCTCCAGTCCAACCCGG	6>8:8<;>7?;;<,7>>;;8:<=16;:789549$%&6)'040$('%0''2
+853_424_115	141	*	0	0	*	*	0	0	TGTTGACTAGCCGCAAGCTCCCTGGACAGAGGCAGTCTAAGCGGTCCGTT	;<<8<<>=9<=?:8:?:?8:A>;3;<=<8;<9?69>99;:;;77;:9/,;
+853_439_1980	77	*	0	0	*	*	0	0	CAATCAGTTTATGCAAGCTAAATCCCCGAGACTGAGAACGAAACTCTCGG	,<='0/71(/:.;2<<9:5>7?2<8<=9987;51?*=>:(7;<,()&:6/
+853_439_1980	141	*	0	0	*	*	0	0	TGGAGCGATTTAGACCGTATTTTAGTCTCCGCCGATAATAAGAGCAATCT	952;8:98452>4=9;:0=3)6/76-666=777+<4::&86.;'7;:+5'
+853_440_379	117	chrM	8797	0	*	=	8797	0	TCCGTCGCGTCTCACGCCTCAGGAGCACTTTGGGACGCCGCTATTTGTGT	6<=8:7:366/<70;+5:9;7:;:<:899=89<8;:79><3:<8:5<8=9
+853_440_379	153	chrM	8797	37	49M	=	8797	0	CCTTACCATATATCAATGATGGCGAGACATCATCCGAGAAAGCACATTC	OOR\KGMS]SU]]ZY]YOQJQ]]\]]]]]]]]]\]]]]]]]]]]W[][X	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:21A27
+853_443_704	89	chrM	8985	37	49M	=	8985	0	GCTGCTGACCACCCACAGGTATCCACCCCTTAAACCCCCTAGAAGTCCC	K[ZHA@@A!.]]\]][]]]]]]]]]]XW]]]YT\]]ZX]]]]]]]]XY]	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:49
+853_443_704	181	chrM	8985	0	*	=	8985	0	TGTTCCTGTAGTATATCACTTTTTTGCCCAGGACGGTGAGACACATGAAG	7:/><:;,?:::>;>=;:>>><9@>;>8A;=?@A@=?=?<=>AA>>AA<@
+853_443_1353	77	*	0	0	*	*	0	0	AGCCGAAACGATTGTCGTGTAAAGGCGTCCGCCGGGTCAGATCGAAACCG	921/5>7972<889;:;9:3?>5;/95<509=7.878/4/;:.28;9/3(
+853_443_1353	141	*	0	0	*	*	0	0	GACGGAGGAGGGTAGTGCGGGGGGCGGGCGTGGGGCTTGAGAACGGCTCA	95:19@9979:<4,82>02:3;5.46:65:5<95<7:;7;:>9*;:<:82
+853_458_262	77	*	0	0	*	*	0	0	TTACCTGCCTCTCCCTCGCCACTTGGATCGCCGGCTGACTCTACATTACA	<;:=7:;;<8<=8;=<</<9?<9::<<:;9;;84:91#2&%,-($&&%*%
+853_458_262	141	*	0	0	*	*	0	0	AAGTCATCTTTCCGGGGAACCCCCCGGACCTTCCTTCTCCCAACCAAAAA	>>;>=;<4><=>5;=;>2=>:>1;<><'::8>(=:?5%<=9;29<<=-0<
+853_458_615	69	chrM	5320	0	*	=	5320	0	TTGCTGTTACTGAAGTCATACCCTAAAGCTTAGTATGCGCGTGTGTCAAG	97899::;:<<:;;;<::9;;77:;;/8:=<6;86;34;;8695;:+5:<
+853_458_615	137	chrM	5320	37	49M	=	5320	0	TCTTTAGATTTACAGTCTAATGCTTACTCAGCCATCTTACCTATGTTCA	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]\\]]Z]]]YY]]Y][V	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:49
+853_489_665	77	*	0	0	*	*	0	0	GAAGAACGAGGTTTAAGATAGCGAAACCGCGACACGGACGGTAGAGTGGC	?::=-->4%&22=8)3<1;7$//6#)=(:%%<2(*,4,;7'92832:$9)
+853_489_665	141	*	0	0	*	*	0	0	ACGAGGAGATTAAAAAAAATGGGGTTAGATTAGATAAGATGAGAGGAGAG	=>?><@=A<@@<?>>=:=:=;24&&)00+&$(4:%%'(4-#+16#-'1.$
+853_489_1193	117	chrM	5045	0	*	=	5045	0	CCGGGTATAATCCATAATGGCGTTTTCCACTCTGCAAATACAGTAAACAG	85@06;<>)=55>29<;?)=>:<:===>5=>=>,><=?2=?<>>>=>=<=
+853_489_1193	153	chrM	5045	25	49M	=	5045	0	GCATACTAAGGACTGCAAGACTCTATCTCACATCAATTGAACGCAAATC	RMO]UZ]]]]]\\]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:1	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:16G32
+853_557_600	77	*	0	0	*	*	0	0	TTGCCCCAAGATCGATCTTGTCCCGAAAACGTAAAGGGCCCGGTGCGAGA	&+&))(51(,1&&:'7:&)=.8),/5034&.&31&0.&-/$3'&)&1&1,
+853_557_600	141	*	0	0	*	*	0	0	ACACGCCGCAAGTCACAACGAGAAGGCTAGGGACAAAAGACGGAGCAAAG	7-0'%()1&'&/65'1'/+,.*&&*17165:+0#-+'.&+''$-,$-&'#
+853_557_1176	117	chrM	12324	0	*	=	12324	0	GTGGACGGTGACGGTAACCCCCAGCCTTCCCAGGAAGCATATAGTGGGGG	;,<<=95:3==7<9@?9;9><<?:=A5@>=?6;<@=8><>:9:>79>@;>
+853_557_1176	153	chrM	12324	37	49M	=	12324	0	GCTTCATCATAGCCATAGCCTGATTCCTATTCAACACCAACACATGAGA	[]]]]]]]]]]]][[]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:10G38
+853_558_962	89	chrM	2448	37	49M	=	2448	0	ATGTTGGATCAAGACATCCTAATGGTGCAACCGCTATTAAGGGTTCGTT	\UV]]]]TS]]]XZ]]XFN]]]\]]]]]]]]]]]]]]\]]]]]]]]]]]	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_558_962	181	chrM	2448	0	*	=	2448	0	CTCCCCCCTCGGGGCCCTAACCTGCCGACCTCGCCCTATCGTTTACTCCT	.)(0908:,&#6986$979'%<6.*772<<;>@=?=>;<>?=>>>==>?>
+853_558_1569	77	*	0	0	*	*	0	0	GCTACACACCCCCGAGCGGCCGGTGTAGTCGACGTGCGGAACGGTCGTAA	(?16:=57:=779:995@=9?<?:>3<??=?339@?@;<@3?:8>><53?
+853_558_1569	141	*	0	0	*	*	0	0	TGGGGGGAATGCGTAAAGGAGGACCATGCCTCTGAGAAACACGCGCGAGA	&&(?(?(8><;;;;<=;<7<;;8<:9;<88=<:<=::?8,6658/:,181
+853_563_1263	73	chrM	8090	37	49M	=	8090	0	AATCTCAATCCAACAATGGCTAGTCCAACTTACATCAAAACAAATAATA	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]\X\][VYZSFM\	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:9T39
+853_563_1263	133	chrM	8090	0	*	=	8090	0	CTCGTACTGCGTAATATACAACCCCACGTCCGTTTGGCTTAACAGGAGCT	@A>=?A@><?=A<==@A==?>>=;==>:1<<:?=<=<;=:?=<&:3<3):
+853_563_1776	77	*	0	0	*	*	0	0	ACCTTGGACCCCTCCGGCAGCATCGGACAAGACCGCTGGGTGGTCTAGGG	=A><?@A:AAA@<>AA9@==?96AA=69;<>8A3>;86&?:;6&<>7??<
+853_563_1776	141	*	0	0	*	*	0	0	GGTCCTGCGGGCGGTTCCCAATTTCATCTGCCCGAACATAATAGGTAACC	@=?=A>A@A>A?>@>>A@>A>?>1@>>>5@?@@8>?@&8><>97(:9:5)
+853_584_1986	77	*	0	0	*	*	0	0	ATAGCTTAACCGAATGCTTTAATAAATTTGCTGTTCTGAGGGCGTTACAC	,:)155*-9#7,;,)'232.:1(4,7#$3#97$%$,''+$,2(##,#%#(
+853_584_1986	141	*	0	0	*	*	0	0	ATGCCACCGCCTTACTATCTTTTTTGCTGACATCACGCCGTCTCTTGGTG	,#$)*)(($3,))$&#,(&#*))&$##&#(%+&'+$,,$2$&(#&#+,#$
+853_585_542	65	chrM	1916	37	49M	=	580	-1336	AAAAGGAACTCGGCAAACACAAACCCCGCCTGTTTACCAAAAACATCAC	]]]]][]]][]]]]]]]]]]]]]]]]]YS[]]]\]]\MS]]]\TW\YTO	XT:A:U	CM:i:0	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:49
+853_585_542	129	chrM	580	37	49M	=	1916	1336	AGCCTAAAACTCAAAGGACTTGGCGGTGCTTTACATCCCTCTAGAGGAG	#(]]]]]]]]]]]]]]]]]]]]]]]]Y]]]]]]]]]]VV]]]Z]]YR\]	XT:A:U	CM:i:0	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:49
+853_585_1153	77	*	0	0	*	*	0	0	GCTCACGCCAGTACCCCAAAGGTCAAGCCTTTCAGATTCCGGCCTGGTTC	87?><89<==9>868=95:49<>7;:96<,:=;-1::::64;58/9;;)1
+853_585_1153	141	*	0	0	*	*	0	0	AAGACCAACGTAAATTATCCATTCGTACGATGCCCTGGGCATTGCATTCC	<>689<?9>59781>9956245:44?6,16=466;77615206+=12$#,
+853_611_981	77	*	0	0	*	*	0	0	GACCTGAGCAGCAGTCGCCTGGAGCAAGCCGGCCGATATAAATCGATGCT	85275/655287&4<7<5889<176837797:835.6&44427/'48$71
+853_611_981	141	*	0	0	*	*	0	0	GCACGGCAAGCGGTACGGGATACGTGAGGCGCGGTAAGCAAACCCGATCC	;=9===@::A><;<6><=;:@8;;==8<?:<<==<<3=<&>55=9;38=;
+853_611_1451	69	chrM	593	0	*	=	593	0	TAATAGCAGCATTCAACTTTCCTGACCTTTACTACTACCGAACCTATGGG	28#'%)5/,)46%-#28,4,/;00,'6,/'-;4%(#9,###:++'.9*##
+853_611_1451	137	chrM	593	25	49M	=	593	0	AAGGACTTGGCGGTGCTTTACATCCCTCTAGAGGAGCCTGTTCCGTAAT	!S]]][TGDQ]WKRZWVRPLPYX[ZWTENZWXEFUX]PFRY[UUVS\QD	XT:A:U	CM:i:1	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:44A4
+853_626_841	89	chrM	10675	25	49M	=	10675	0	CCTCCCACTCTTAGTCGCACTAATCTCTATCCAAAACCTAACAGGCTCA	R]]]XZ]]]]RLZ]]]]]]]\T]]]]]]]][]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:1	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:15T33
+853_626_841	181	chrM	10675	0	*	=	10675	0	CCCACCCGCCGTTCTAGGACGGCCACATTTTTATTAAGTCAGCCGGGATC	,)4,(85:>=?6@6>=7<=<>;>=<;?=A=<>>AA>@>A<>@?@A@?@AA
+853_626_1431	77	*	0	0	*	*	0	0	TGGGTCAATGCCCTATATGACATTAGGTTCGCGGTCGGTAACGAACAGCA	11-/8<:967:;959<<:5:<21781187057585;;*6-5$%8,2&%9$
+853_626_1431	141	*	0	0	*	*	0	0	ATGTAGGTCCCTGACGGCCCCACGGAGGAACCTTAGCTAGGCCAACAGAA	>5<:5897:<;4==:;7>;9;<979>89?<7;;:<9:6<49;8644.1+$
+853_628_1041	77	*	0	0	*	*	0	0	TGAGCAAGACCCGTAATCTACAACGACCAGCGGTTATGACAATGTATAGC	978:5,7295,/889'529//,,:55227($128:'9*83,4&29&,%57
+853_628_1041	141	*	0	0	*	*	0	0	CTATCGCTGATTTCACAGGAATCGGTCTTATAAGTTTGACCCCTTTTTTT	<9)9<7839<:>/<<;>3'A9<36=<9$#9<8((<=8'&;97'7>;#2(8
+853_628_1976	117	chrM	620	0	*	=	620	0	CGGACCCAGCAGTGTGAATCTGGGTAATCGCGCTGAGTGACAGCTCGGAA	-&-,&&$9/84359:0;=1<7:::8?>.<9<:<:8A869=?=<;9=:<@<
+853_628_1976	153	chrM	620	37	49M	=	620	0	CTAGAGGAGCCTGTTCCGTAATCGATAAACCCCGATAAACCCCACCATC	ON]][RQ]][W\]]]RR]]]YZ]\\]Z]]]]Z]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:17A31
+853_630_585	77	*	0	0	*	*	0	0	TAGTGTCTTGGTTCGTGTAGAAGTGCCTGGCTTAGCTAAATCGAATTGCT	15/,/(/))=&,)>,):(>:<=/,)/3>:,,49/(6)/;/',.11.+9'4
+853_630_585	141	*	0	0	*	*	0	0	GGCTGGACTATGCCGATGCGCGGGCACGGAGGGATCCGGGACCGGGAGGA	&#$%#)%&#%#$$&(.##$##)-$&%%##&&.#&#$&-$#&'+'#$,,$&
+853_630_1363	69	chrM	2399	0	*	=	2399	0	ATAACAAAAGATTGAGGCCCATATTAGGTATTACCGCAAAAGGTGAGACG	A@A=AAAA>A?@><?>@AAA8=:A@:?>A89:@>?=<?=@8A;;=59@8A
+853_630_1363	137	chrM	2399	37	49M	=	2399	0	CGCAATCCTATTCCAGAGTCCATATCGACAATTAGGGTTTACGACCTCG	]]]]]]]]]]]]]]]]]]]]]]]]]\]]]*,[]]IEZ]]]V[]]/1\SH	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:49
+853_648_1618	77	*	0	0	*	*	0	0	GAAAAGGGGCAGAATTTCGAGGGGAGTTAGGGCACAATCCCGCTAGCAGC	&?,//&6(=77)):,)7.)933<)4%=:-8,831885//@3@:154',&3
+853_648_1618	141	*	0	0	*	*	0	0	TTGATCCTATGCGGACGATTCCCGCGCTTCTGCAGTTGAGTTTTTTAAAA	1/(,/3<)+7%'/,%'&1)'09';/5.)%,)1&*111&+&5&0$4%$581
+853_649_292	117	chrM	1156	0	*	=	1156	0	GGAATTCCTGGAGAGGGGGGTTGGGGGGTTGAGAAAAAGGGGGGTTGGGT	::4572;408<;82=:;?::5;9=:<::98=<57:<;;>?;;=>:;;>9:
+853_649_292	153	chrM	1156	37	49M	=	1156	0	CACTTAACTAAAACATTCACCAAACCATTAAAGTATAGGAGATAGAAAT	VV]XR]\]]Z]]]]]]]]]]]]]]]]]]]]\]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_669_616	89	chrM	8554	37	49M	=	8554	0	TTCTACTAACTATCCTCGAATTCGCAGTAGCCATAATCCAAGCCTACGT	YKKZ][YXT[\]]XZZYSM]]TNZ]WUXZ]]Z[]]]\TY]]][Z]]]]]	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:31T17
+853_669_616	181	chrM	8554	0	*	=	8554	0	GCCGAACATGCATGCAGGTGGTCAACTGTTCCTGTAGTATATCACTTTTG	3;>8==8=;>:A?:>A<@9>A=?=@<9<?>>A?@@>@@A>@<@>>=><AA
+853_669_1548	77	*	0	0	*	*	0	0	TTAGCTAGACATTAAACCATCCCTCTCATCTCCGGTTAACCCCGCCAGTT	=;=<<=<<;=61:977/7;:96::<8.7<8;39:;976;;63)9;1+2:1
+853_669_1548	141	*	0	0	*	*	0	0	TCGGGGACCGCCGCGCTCTGGCAGAGAGCTCCAGGGCGGGTGCCGGCAGG	8<977;>:=:;=:9><:9<;795<65>2>;;99=9/<4<8113/78,((&
+853_678_1204	77	*	0	0	*	*	0	0	GCAACCCGTACAAGTACAAGTACAAGTACAAGAACAAGAACAAGTAAAAA	)=1=89;35:6:=:6;9A<5361?>1/6/=<'/;,A=&,:&>=/(5&A7&
+853_678_1204	141	*	0	0	*	*	0	0	CTTAAGAGAAAACCTGCTAGCAAACAAAAATAGGGGGGGAACAGAACGAG	737,88957/39486691$92<:77<:1060:9),4&/)),)(').4+,'
+853_678_1908	69	chrM	14105	0	*	=	14105	0	TAATAGGTCGATAACGTTAGAGACGTAAGAGGAAAGTAACTGCCGTCATG	8@?:57<:::?;=><=:<?:@=?>9=@=97?;>=7<7?:66<:;:9;=83
+853_678_1908	137	chrM	14105	25	49M	=	14105	0	ATGTCATCATTATTCCCACGTGGAATCTAACCACGACTAATGACATGAA	]]][]]URX]]]WV]]UO\]]]ZXTRYNQX]]WVPNTOVXWUSRDLWEN	XT:A:U	CM:i:1	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:37C11
+853_718_1061	73	chrM	1329	25	49M	=	1329	0	AGAGAACTTAAGCTAAGCACCCCGAAACCAGACGAGCTACCTACGAACA	]]]]]]]]]]]]]]]]]]]]]]]]]]]]\Z]]]]]\V\]]X\ZUSU]]]	XT:A:U	CM:i:1	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:43T5
+853_718_1061	133	chrM	1329	0	*	=	1329	0	TGTCGAATATGCATTAAATAAGACTTGGCCGACTTGAAAAGTGTTGGCTT	>A><@?@>@=>>;=<>@===<?=;>@A<=9:>;>=6==8<89:5>8>>;<
+853_719_183	77	*	0	0	*	*	0	0	ATTTTAGTTTACCTTCTTGAGTTCTACCTTAAACTTTGACCTCCCACCCC	)/31.$%5'/#)',4#)'+$&7%%,&)#&&#%($$$$$%###%$'.##)'
+853_719_183	141	*	0	0	*	*	0	0	TAGAGAGCACTCCAGGGGAAGGGCCCAGAATCAAATAACAACTAATAGAA	99387)&%.,./'%682&.53/$)*65-440/#%$1$##.&$##2#,%$,
+853_775_1932	73	chrM	5645	37	49M	=	5645	0	CCCGAATAAACAACATAAGCTTCTGATTACTTCCCCCATCATTCCTACT	]QHY]Z[TDO]]]][[]]]][]]]]]]]]]]]]]]]YY]\]]ZOKZUW]	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:49
+853_775_1932	133	chrM	5645	0	*	=	5645	0	GTTTACGCGTCCCATTTAGCTTCGCCTATTTTCCCGTGGAGTGTCACCCA	((>3,,(/7&(A,3:5('4&<<?3;/,;8=()7@=:(3556(9:>/1317
+853_776_924	77	*	0	0	*	*	0	0	GGATTGTTACGTGCGCCCTATACTGGAACTGACCAGTCATTGACTGGAGA	-212<+87/3582?/4731,<2(A:956/<3148*:7/28069392;:7/
+853_776_924	141	*	0	0	*	*	0	0	GTGGGGTTAAATAGTAGAAGCGCGGACAGGTCCACGTGGAGCGCGAAGAA	88;9855?888?<.;=:54875'67+1#9661#474.5374&#1:2*%88
+853_815_1179	77	*	0	0	*	*	0	0	ATTCAATGGACTAAATCCGGGACCGAGGCGCGTCTGGCAGTCGACAGCTA	67827:>5597:=:<6<,224348025,71:879724,2(7/29)92222
+853_815_1179	141	*	0	0	*	*	0	0	GCGGACTAGAGACGTCAACTAGGAGTAGCCGAGTTCAAAAGGGCAAAGGA	<'#37,/*;1;7,;45-738,(/3,+.%21:/&93('(+7#*(,8(*(&/
+853_816_193	69	chrM	2616	0	*	=	2616	0	GTGGTCTGAGTCAACCTGTAGATGTTTCGTGCACGATAACCCAGGGATTC	><><<;<@;9;>;=::>:==8<::=8>7<<:</=<8=@<?878>?<6?<6
+853_816_193	137	chrM	2616	37	49M	=	2616	0	AGAAGCGCCCTCAAACTAATAGATGACATAATCTAAATCTAACTAATTT	]]]]]\]]]]]]]]]]]]]]]\\\]]Y]]]]]VY][X]]Z[NL[WMQT[	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_827_2017	89	chrM	5150	37	49M	=	5150	0	TTTTAGTTAACAGCTAAATACCCTAATCAACTGGCTTCAATCTACTTCT	FCHRRSLJSMOW\\Y[]YZOIDI][\]]]]\Y[Z\]ZUUZ[Y\]]]]]]	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_827_2017	181	chrM	5150	0	*	=	5150	0	ATTTCGAATCGCACGCGCACACAGTTCGAGGATCCTCTTAAACGTTAGCG	++6=<9;<8<7935;5480<::;<;::8;8;7994=<8?:=;8;>::8?<
+853_828_1138	77	*	0	0	*	*	0	0	TTAAAAGTCATGAGCGTACAACACGTGCCATCTGTCCTTAATACCTATCA	&)&$&)&&&&)&&%&&&&)&'&&&%&%&&%%&#&&&&&&&&&&%$&&&#&
+853_828_1138	141	*	0	0	*	*	0	0	GCACTATCGTGTGGCCCGATGTCCGGTCCTCCTCTCGGTTTTGGACCTGT	&+&&)')$#,&,#&&')&%&'/&$$'#####&##%$$###&&##&$$###
+853_843_799	73	chrM	16042	37	49M	=	16042	0	GAAGCTGGACTTAAATTGAACGTTATTACTCCGCATCAGCAACCATAAG	]]]]]]]]]]]][\]]]VT]]]YZ]]]QR]]]]W]]]UV]]]OL]]TQT	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:27C21
+853_843_799	133	chrM	16042	0	*	=	16042	0	CTACACCTGCGTATCGCCTCGAAAATGCTGTCACCTTAAGCACGTTTAGG	@>>=A:AA=A9A>@4:=>:8:2?:@23;>;;9=1<=;=933'58>;9>:6
+853_843_1357	73	chrM	13593	25	49M	=	13593	0	TCCACGAGTAACCTCTAAAATTACCAAGACCCCAACAAGCAACGACCAA	]]]]]]]]]]]]]]]]]]]]]\]]]]]VU]]]XJQ]]\UYYXTOX]ZQN	XT:A:U	CM:i:1	SM:i:25	AM:i:0	X0:i:1	X1:i:1	XM:i:3	XO:i:0	XG:i:0	MD:Z:45T3	XA:Z:chrM,+13593,49M,3;
+853_843_1357	133	chrM	13593	0	*	=	13593	0	GTTTGCTAGAGTCGTATGTAGTCGTCGTTTCACGTGACCGGTCTACACCC	>:AA8=?:??:?@>@?><>8<;<:>31=>:8(=8<74=,9;?5;724>48
+853_844_231	77	*	0	0	*	*	0	0	TTAATTCTAGGTTTAAATGGAATTAAGATCCTGAGCCGGCCAAACCCGGG	&&8151/>,/,/8,(?<=&('(?/;8&8))<?11=39%718,$,./9*89
+853_844_231	141	*	0	0	*	*	0	0	GGGGGACAGGTGGAACTGGTAGACGGTACAAGGGAGAGCGCAGGGGATCA	4289*5)*(/(/+;=$/806&&*76&,.19&4754&2/9/92>3;)11:,
+853_844_634	77	*	0	0	*	*	0	0	TCTATCCACCGAAGTCAGTGTCTGAAGTCTTAGACACGTTCGAAACCAAT	7#56860817:11777)66,9&>7%;188/87,9&5608#9.764682%0
+853_844_634	141	*	0	0	*	*	0	0	TCGAAAGCTCAACATCATCCGGCAGGGCGTAAAACTGGTCGCCCATTGAA	>A;887A=2@9>;.;<67,;?::2:<;9#?<97/7<944:;):&*>90,6
+853_877_1974	77	*	0	0	*	*	0	0	TTGCCGTGAGGCGATTGTACCAAGATAAAAACAAAATAACCTAAAAACAA	*,*-4'#)74,',)(*##,#&#+#%##&#$'##%##)(#$%##$#(##'#
+853_877_1974	141	*	0	0	*	*	0	0	GCGTCCGCAAGGCGCGGAGCCTGAGAAAATTAGCCCGCGAGAATGACTAT	76187559,719324834789;;285501;<<65:<<:9;;99=<830+:
+853_878_1093	69	chrM	2417	0	*	=	2417	0	GGTTGGAGCGGGATAGCAAATGAGGATCCTGTCACAATCTCCCACTCCGA	@@/&3,(,,5533/161?@57/1,3>3<<8>53)65=1)735,1A<;:8@
+853_878_1093	137	chrM	2417	37	49M	=	2417	0	TCCATATCGACAATTAGGGTTTACGACCTCGATGTTGGATCAAGACATC	OZ]]]Z]]YWI8J]]TJX]]N;K]]RAN]N;3@XZH9=NYH>T]UE!/X	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_887_1933	89	chrM	11695	25	49M	=	11695	0	CAAACACGGCTCTCTCAAACTTTTAAAGGATAGGAGCTATCCGTTGGTC	W\]]UJN][WZ\]]]OR]]]]]]]]]]]]]W[]]]TQZ[]JCQV\]]Y]	XT:A:U	CM:i:1	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:6T42
+853_887_1933	181	chrM	11695	0	*	=	11695	0	GGCGCCAAGCCGTCCGACGACACTTGCGATGTGGGGACAGAGGGTGTGAA	))%,&))3#=4:=;<=:>8<:9=;?@<=<<>?A==;9<:><<<7@>>?4<
+853_888_1016	77	*	0	0	*	*	0	0	TACGGGGGAAGGGCATCCCGACGTTCAGGGCTCGGCACCACCCCAGAGGA	&(,,//6)))'<&/9&')/,,)(,&,&&9&<)/'3,),/&&)7:)(/),/
+853_888_1016	141	*	0	0	*	*	0	0	TGAAGACCGGGGGTCCTATGATCAACCCAACCATGAATTGTCACAGACCG	&.+/)(-#'('&5#405$2220&,/03$0+)9$(#)4%%&&-,#&#),'#
+853_943_830	77	*	0	0	*	*	0	0	TATTTTTGGAGTACCCTCCTGTACCAATAAACGTGGCCCCGCCGGGTGCA	61)5/6,34'20)%@#)#<%#$<)6+33&6&')4&0'0*(#'215.$'9/
+853_943_830	141	*	0	0	*	*	0	0	AACCTACTATGCTCATGCTGGAGAAGAAAAACACCGGTGCCATCAAACCA	(>,5+''#1):,#>#10#%2:%$3&(4#.#..#*39(#':6,$'%))##4
+853_944_156	117	chrM	2054	0	*	=	2054	0	TTCGATCAGGGTACGACTGTGGAATTTTGAGTACTGCGTCTGGGACATTG	:<3><=.:><?19>99.;>;67:>==<=A=?;::>=8<??>>>A<<==;;
+853_944_156	153	chrM	2054	25	49M	=	2054	0	TCACTTGTTCTCTAAATAGGGACTTGTATGAATGGCCACACGAGGGTTT	PV]]\XV[]]]X[]]]]]]]]XW]]]]]]]]]]]]]]]]]]]]]\]]]]	XT:A:U	CM:i:1	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:10C38
+853_946_129	89	chrM	7799	37	49M	=	7799	0	GTGATATGCCACAGTTGGATACATCAACATGATTTATTAATATCGTCTC	ORU\]]\\V[]]]]]SS]]]]]]]]]\]]]]]]]]]]]]]\Z]]]]]]]	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:49
+853_946_129	181	chrM	7799	0	*	=	7799	0	ACGCCACGCAGCGTAACGGCAAGCGCGGGCTCAGCACGAGACCTTGCGCC	'&($%,4().)8%.4::%$'492/(88.$0:<,&,=7/.,7,$',:;<:8
+853_946_1345	77	*	0	0	*	*	0	0	GCGCCCGCCGTCGGGCTGAAGAGGTCGGCCCCGACCGCCGTCACCACCAG	8386936:688649:8;80:8#,#/,#1#-3#,#)4)2#42)&&12'2%/
+853_946_1345	141	*	0	0	*	*	0	0	TGGACCCGAATCCAAGCAGCCTGCGAACAAGGTAGGCGCCTGGTTAGCCA	?A<:<<A:=<:@6<><@:=>1@=<==<4:>:=<:>985::685;:2689;
+853_967_1892	77	*	0	0	*	*	0	0	TATAATAGGTAAGTTCTGCTCGGAACATATTTTACCCCATTCTGCCTACC	8;64;9:878<=<9;:8>5:;9<>:;>769&;1://6&8;):1890:471
+853_967_1892	141	*	0	0	*	*	0	0	TCGGGCAGATGGCGTCAATATCCTAATCCCGCGGAGCGGGCAGTACGGAT	:>;<<<@==;<<<>;2-#8>87'9><*%=@271=A6//=;)7,;=1).:5
+853_968_485	77	*	0	0	*	*	0	0	CCCGGTCGTCCGTTTGCGGTAAACGGCAACACAAAAACCCCAACCTTACC	<=?;>==@<;>;<=><<?:<=?>=;?<>>=:><>=>7;>>7;8<::8:><
+853_968_485	141	*	0	0	*	*	0	0	GAATGGAGGCGTGCATTTGAAAACGAGGCCAGGAAACTTCAGTACAGGAA	=<:@<;:>@AA;>A9?8===<=>9<4;=7:2==9;94?@>.,;&;,=<&0
+853_968_835	117	chrM	7621	0	*	=	7621	0	GTGTCCGCGCCGGAGCCGATTAAGGATATTTTCCCGTATCCATGACTTAT	-986=;>48<==:<==<5<<9>::<=>>8<;>;?>><>=@:>:?<:<;A6
+853_968_835	153	chrM	7621	25	49M	=	7621	0	TACTACGGCCAATGCTCAGAGATCTGCGGATCAAACCACAGCTTTATAC	ZLCP"!ATX[NN]]]RR]]]Y[]]]\]]]]SS]]]YZ]Y]USVY]UU]]	XT:A:U	CM:i:1	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:8T40
+853_968_1657	117	chrM	1985	0	*	=	1985	0	CATAACAACATTCGGTAAGGTTTGATTAAAGTCAGCTCGTTGTTGGAAAA	&%%)&')##$*,#$#$(#####,&#*%&$+##36<6<<8;99<9<88::;
+853_968_1657	153	chrM	1985	37	49M	=	1985	0	GAGGCACTGCCTGCCCAGTGACATCTGTTTAAACGGCCGCGGTATCCTA	\TZ]Z]ZTY[[[]]]]Z\]]]]]]]]]]ZY]]]\Z]]]]]]]]]]]]]]	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_985_616	89	chrM	231	37	49M	=	231	0	CCCCACGGGACACAGCAGTGATAAAAATTAAGCTATGAACGAAAGCTCG	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:45T3
+853_985_616	181	chrM	231	0	*	=	231	0	GGTGGGTTGATATCGCGTCACTTAGGGTGGTAAGGTATGGTATCACAACA	)$)($$#1&,&,#)#1&6=3;<=?;568=:;>@868@@@4>=@>>8A?@=
+853_985_1608	77	*	0	0	*	*	0	0	TGTAAGCTATTGATTATACGCCCAGATGGACAATCGACAGGAAGGGAGGG	<:99:7<::<:>,<<;=:<97?5/:/;:2::::58<921;>:::<=19=<
+853_985_1608	141	*	0	0	*	*	0	0	CCTCGAGTAAGGAAGAGAGAAGGGTACGATTATAATCCTCCCAAAACGAG	@798;<9::<9;<:=?9>8;=9:97?68?=;1<:58:3/97%2)%-)#&#
+853_991_1890	73	chrM	3733	25	49M	=	3733	0	ATGTCTGACAAAAGAGTTACTTTGATAGAGTAAAACATAGAGGCTCAAA	][]RO]]TDABJVW]UU]XURWUR]]]]]SO][IHW1(NUSD!!H\6$:	XT:A:U	CM:i:0	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:49
+853_991_1890	133	chrM	3733	0	*	=	3733	0	AGGGGGGCAAGTTCAGGTTAATATATAAGTTTAGCCCAAAAATTACCTTC	>,>)&,(->>.32(<@>1&=)/:/)>/&+((>,;)3;&1>=;,%63=7:9
+853_992_1006	73	chrM	5367	23	49M	=	5367	0	CATCAACCGCTGACTATTTTCAACTAACCACAAAGACATCGGCACTCTG	]]YT]]W\\U]YOT]]]]]]ZV][]]RT]][Z]][]][\ZUSYTRXQPY	XT:A:U	CM:i:0	SM:i:23	AM:i:0	X0:i:1	X1:i:1	XM:i:0	XO:i:0	XG:i:0	MD:Z:49	XA:Z:chrM,+5367,49M,3;
+853_992_1006	133	chrM	5367	0	*	=	5367	0	CTGAATCAATGAGCCCACCACCACCCAAATGCTACCTACAGCAGACAGAG	###(#$#$0###1(###+,'##*##%#%##&##0####$&'#*%*'%#+#
+853_992_1044	77	*	0	0	*	*	0	0	TGCGTCGTGCGCTACTCCGTATTCCCCGGTAGGGGAACCTCGTAGGACGG	&/5-<)&(':4+<3838&&4&7'1-17&,/11044//$&,%8,%$4,-%#
+853_992_1044	141	*	0	0	*	*	0	0	ACAGAGGCCCACCTGCTCACTCGGACAGCCGCCCACGATGAGCACTGCTC	:70.7143#46<257:>/,488938=96958:/75;29)715689/8(&+
+853_993_143	77	*	0	0	*	*	0	0	CGGAACGAGGGAGTATAAGCATAGTCCCGCATCAATAGACCTATGGATTT	<788::9:8:77>3,6;<768:?:39<=:611>9751:;8:55895(>;3
+853_993_143	141	*	0	0	*	*	0	0	CGGGGCTCCAAGCTCCCCATCGAGAGACTGGGGTCCGTACACCAGACTCG	;759<65;<>97<::==@/8;6;6<:;85==1::;;:97<,9=937:79:
+853_996_488	77	*	0	0	*	*	0	0	TGCCCCGTCCACAAAACTCTAGACACACGCCGACCTTGGCAAAAGAAGAA	.&'6,#*<(%'8('(,8.4'.1*9)81-0(*0$&2+-)5,0/,1*21#%*
+853_996_488	141	*	0	0	*	*	0	0	GCGTACCTGAACTTGGCCATTAAGAGCAGAGCCACCAGTGTCGCGGGGGC	&-'*/*/8)$2(,.22&10&,))0/+,$38'(531,)2)'((%'6'(-1.
+853_996_1656	113	chrM	16037	25	49M	=	1018	-15019	AAATTGAAGCTGGACTTAAATTGAACGTTATTACTCCGCATCAGCAACC	YVP/1W[[\]YY\]\\]]]]ZT[]][[]]]]\]]]\Y[[ZWY\Y\]]]]	XT:A:U	CM:i:1	SM:i:25	AM:i:25	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:32C16
+853_996_1656	177	chrM	1018	37	49M	=	16037	15019	AGTATACCGGAAGGTGTACTTGGATAACCAAAGTGTAGCTTAAACAAAG	]]]\]\]UQ]]][]]][]]]]]XW]]]]]]]]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:0	SM:i:37	AM:i:25	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:49
+853_997_740	77	*	0	0	*	*	0	0	GGGGGGAGATCGGTCGTCCTCGCGATTCGACGTAGGGAAGGAAACCGAAC	9&5;'.1')&(4&2&(,'))=&,,-.&+,&)(.,7/2)(4/-'95,4,<3
+853_997_740	141	*	0	0	*	*	0	0	GTTATCGGGGGTTTTCGCAACATAGCTTTGGTAAGCATTTCTGCACCCCT	(=('(,(,+<=3?<;::97<;::9<;8:4;<;9::=38:;?=;1<99087
+853_1026_2018	77	*	0	0	*	*	0	0	CGGTCTCCGTACGACGATACGCTTTACGGTATAAGCCAACTGGAGTGGGT	6<7=7;6,7=(6928:#;#.8#$'7###4(%/#$.'')0'3$(&)&(2**
+853_1026_2018	141	*	0	0	*	*	0	0	GGAGCTATTGCTCAGAGGCCATGTGGTGTCCGTTGGCGTTTGTGCTGGTG	9<#64>;#659;#%61;'11&<+7#9=-3(3:/3342&)361&&(34#%,
+853_1027_1303	69	chrM	3893	0	*	=	3893	0	GAATTATTCTTTTTCGGCTTACTATACACTTTACTAAAATCCTTAAATTA	*,10,,;0##3##&#%&#&(%##&##$&#%####%%&$#&#####$##$$
+853_1027_1303	137	chrM	3893	37	49M	=	3893	0	GGGCCCATACCCCGAAAATGTTGGATTACACCCTTCCCGTACTAATAAA	]]]]]]]]]]]]]]]]]]]TS][QV]]][Z\]YXTWWYYQXXYML[TK'	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:49
+853_1055_941	77	*	0	0	*	*	0	0	TCGTTATGGAATTATCGATTCCGCTAAGCACTCGGACCCCAAACGTACCT	AA@<@@AA=?@AA?@A@@@@?@A8>>@A><>77=>>=>=>>?=A:<1>8@
+853_1055_941	141	*	0	0	*	*	0	0	TCTTGAGGTTGCGTAATTCACGGTGAAATAAGGAATAGTATCGTATCGAA	5&1)>3175@6//;@:3/)=5&$#&&&&&&&%&$'&&%&)&&$&&&&/&)
+853_1056_37	117	chrM	1193	0	*	=	1193	0	AAAGCAAAGTGGGGGGTAGAGAAAGGGGGGTTGGGGCACTAGTCGATAGC	(&47&&,&,&-*):164,5511;9;6/5;:0':15&,;;24'06/<6:):
+853_1056_37	153	chrM	1193	25	49M	=	1193	0	GGAGATAGAAATTTTAACTTGGCGCTATAGAGAAAGTACCGTAAGGGAA	!!(BOW05\WSGGRNOPLLNRX]]XY]]]]OP]XVVW]]]]]]]XU\]]	XT:A:U	CM:i:0	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:49
+853_1075_559	77	*	0	0	*	*	0	0	TCCACATGACCTCTACAACAGCCTAAAAGTATCAAGCGGCCCAGGTCAAA	86*0.#&1*,4#2'&/'%1)152+02'9#))&)%&*&'%+*0#'#&-.$0
+853_1075_559	141	*	0	0	*	*	0	0	TGAGCGCCACAGAGGGGAGTGAAACCTCGCTTCTGTATATTAGGGTAGGG	#&5*&&(1&%&)2$,=(5+;9(0$2:&)%%$)1#:(#)2*,(',)#(,,#
+853_1076_58	69	chrM	2475	0	*	=	2475	0	ACAGGTCTAAGCCCGTAAAGTCGATCACGGACGGGTCGGCTTATATAGGC	78=89::;::8<:3<<;<9<8948;73:<<59::8:96:=(67881599,
+853_1076_58	137	chrM	2475	37	49M	=	2475	0	CAACCGCTATTAAGGGTTCGTTTGTTCAACGATTAAAGTCTTACGTGAT	]]\\\]]IIUW]JJ\\]YYYZ]\\]][USZZZQOWX]YTRQ\OIPQWNE	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:49
+853_1091_1124	77	*	0	0	*	*	0	0	TTGCAGTCCTGTGCGGGGCGGCGGATTCGCTGCCTGTGCTGGGGGGTGGG	6;;;<===<@9?4:A<>9=>8;=<6=>/5578))2.&''(&%$$-+./$,
+853_1091_1124	141	*	0	0	*	*	0	0	GGAAAGTCAAAGGAGAGAATCGGCCCTGGAGGTGGCGTAAGGCGGTGTCC	=?>@A??>@<<>9;9@>5;<A;??>A?:<>?;5:9;674;<518:5$=09
+853_1092_230	117	chrM	197	0	*	=	197	0	GATACTTCGTGCCTGGATTGTGCCTTTCTTTTCTTGGATCTTTTCGTCTC	0)/8'/785%+59539,67%1974*)/;5+:2=7(9-=2,//;3&3,>)1
+853_1092_230	153	chrM	197	37	49M	=	197	0	ACAAAGTAGCTCATAACACCTTGCTCAGCCACACCCCCACGGGACACAG	JX]YUTTOU]OO[]]]URUY[XY]Y[]][]]]]][[Z]]]]]]]]]]]]	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:1G47
+853_1094_215	77	*	0	0	*	*	0	0	GCGAACAGGGACGCAGCGGTGAACGATTTTCGCCTCCCTCACCGACCCCA	8;8.,:/*2./:*#3.2+2'(82&)$&266#4)(2/'*%1%$4'1*-:.3
+853_1094_215	141	*	0	0	*	*	0	0	GCCTTTCTCCCTCTCCTCTGGTTTCGCCTTGGAACAAGCGAAGAACAGGC	4)&/-,1&$77/,.114('(1+)%'*0#,3$$#,#'&(#$$)#,$%3,#+
+853_1094_1720	69	chrM	7802	0	*	=	7802	0	TCTAAGTAAGCCTAGCGTCCCTCTATGCTGTAGTGACCAGAGAGATTGTC	730,<8814/7479>7<7/1=;/:)=2;;,<<<;55=;7<==8/,:;&7'
+853_1094_1720	137	chrM	7802	37	49M	=	7802	0	ATATGCCACAGTTGGATACATCAACATGATTTATTAATATCGTCTCAAT	X[]]]]VRSYXRY\]]]]\]XPRTTYXUSRUVYILXOSSMOQSLTSNXU	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:49
+853_1138_1582	89	chrM	7649	37	49M	=	7649	0	GATCAAACCACAGCTTTATACCAATTGTTCTTGAACTAGTTCCACTGAA	\]UPSS\RLW\]RPYY][Y]\]]ZY\\[Y]]]]]\]]]SS]ZVW]]][\	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:28C20
+853_1138_1582	181	chrM	7649	0	*	=	7649	0	TCAGGAGCAATGGGTCATAGCGTTGGTGTTGTTGGAATCAGTGGGAACGC	86<8;?5:99>6<>/@=9=8==7=@=<7;<><:?=@?;>@<9<=?@@@=?
+853_1139_914	77	*	0	0	*	*	0	0	CTATGAATCAATTTGAATAGTCGTCTTAAAATATGGCACCAAAAGCGATC	<(),)&6:$&>'8)('$&5)$*'#+'1#.6,)#$1&('',&6&+',&&+/
+853_1139_914	141	*	0	0	*	*	0	0	GAACTAAAGCCAACGCGGCAAACCTTGTGCAGCCACCGCAAAACCACACC	)4#%&+2%$,/$##*000$&.2(,'',,#'&#%%)%%#+,'-&$,$*&)*
+853_1144_824	77	*	0	0	*	*	0	0	GCTCGCTCTCAAAGGGGAGAGGGAAAGAGCTGCTGGGCTGGGGGACCGTT	'(')%&,:4'.+4.:4(/028:9;:;01:;/6-(8344)/#++1),&9)&
+853_1144_824	141	*	0	0	*	*	0	0	ACCGCAACATGCTGAATATGACCTAGCAAACTACGAACAATCTGAACCAC	'8'..1/#3)()&$%'/(&&#((('$1(.#+))',$)%(#(+),,,#$.)
+853_1145_305	117	chrM	13509	0	*	=	13509	0	GGCCAGATGTGGGCGAGCATTCCTGTCAGTACTCAAAGGTGTAAGACATC	<=;>=883>6=>;=:8==;=?>;=<==<>><=>=:9;;<=?>><>:<=?=
+853_1145_305	153	chrM	13509	25	49M	=	13509	0	TAATTTCCACCCAAAAAGGCCAAATCAAATTATATTTCCTCTCATTCCT	SY]#)]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:1	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:19A29
+853_1148_420	89	chrM	5650	37	49M	=	5650	0	ATAAACAACATAAGCTTCTGATTACTTCCCCCATCATTCCTACTTCTTC	UVVVFA<JWQXSU\RPSWOJP09YPT]]XSZ]]]JO\]]XX]]]UUZ\#	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:49
+853_1148_420	181	chrM	5650	0	*	=	5650	0	TGACCCTCGGGCCAGGCGACCTATATGTCCGTGCATGTCACCTAGCGCAG	=<:5;<1:,:=8;==?9;><>><3@><;@>@==A@>?:?@?=<A@=@>>?
+853_1148_1437	77	*	0	0	*	*	0	0	TTTTCCAGGTGGCGTGTCCTTAGCAGGCACTGTGATGCTCCTTGTTTAGA	3875((77'%//28,(884:9/(;$59(03%%(5$'%+)$)&-.7513(4
+853_1148_1437	141	*	0	0	*	*	0	0	TAGCGGGGCGTAAGAAAGTAGAGTTGCTGGAAGATACGGGAAAAGAAGAG	59)&&;')&&4,1)&/;&(-)1&/(6/,0,1<<,:<5(748':;9==/7<
+853_1149_239	77	*	0	0	*	*	0	0	CTGACCGCTATAGCGTGCGGAACAGGGGGGCCCTCTTCAAGCGGGGAGGG	3<51,*1*)88&%:1%+)%8'$//0.15*4';195/&//'9;(&38)7&-
+853_1149_239	141	*	0	0	*	*	0	0	TCCACTCGGCATCTCTTGCGACCGCTTGAGGGGTCTAGAAAAGCCCTGGG	$$+,#2#',+*%0'',#$*4(8#'0$5&#+0/4+*0+5%&(2)#&3/('+
+853_1149_1929	69	chrM	8987	0	*	=	8987	0	CTAGTACCACCATTGTAGTAACGAGGGCCGTATTTAGGAGGGGCGCAAGG	><:<=98>;;>=<>><@@==>=A=<<;><;>:><>9<?<:><<<;>;<><
+853_1149_1929	137	chrM	8987	37	49M	=	8987	0	TGCTGACCACCCACAGGTATCCACCCCTTAAACCCCCTAGAAGTCCCCT	]]]]]]]]]]]]]]]]]]]]]]]]]]]]VY]]Z]]]ZOTJJYTNV]]TO	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_1231_1371	77	*	0	0	*	*	0	0	ATATCTCCTTCCATTTCTGCCTGCGCCTATGTCCTTTTAGGGGTGTTTGC	,/0,.#'#$954),&#-',;.*##*(*.'82#$#2*$*#(%%&###,'#+
+853_1231_1371	141	*	0	0	*	*	0	0	CGCAACGTTCGTTACCCCTGTGTTTATACCTGATTTGAATTTAATCGAGG	#:2+%%-,#,-/''''#&**+.#%&,*)#*#1$$&+%$%'%&3$'/$'(/
+853_1231_1635	89	chrM	3568	37	49M	=	3568	0	AACATGTTCCTTCCTATGAATCCGAGCATCCTACCCACGATTCCGATAT	YWRUYRTQEFQZ\WY][SUZZYX[]]TQ\WY]VV[]]ZW[]\OR]]]]]	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_1231_1635	181	chrM	3568	0	*	=	3568	0	CGCATGTCAATCTGGTCCTTCATGCAAAATCTTGACTGAATTAATAAAAG	37):115'<654068;15:98:,67:74<9967;=<65@9:9;?;<;=><
+853_1232_516	117	chrM	1292	0	*	=	1292	0	GTTGGGGGGTTGAGGAAGAGGGGGGTTGGGGGGTTGAGAAAAAGGGGGGG	4),%/-61&)0/'&&&4&&&,4/&-*5)&)/5.&&)+(&'*(,&'))685
+853_1232_516	153	chrM	1292	37	49M	=	1292	0	CTTTTGCATAATGATTTAACTAGAATAAACTTAGCAAAGAGAACTTAAG	!8[04XW]]ZZX]][XV]ZW]]]]]]\]]Z]]]]]]Y]]]\V[]]]]]]	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:49
+853_1232_940	77	*	0	0	*	*	0	0	TAGGGCTAAGTGTCGTGGCTGGCCCCCAGCCAAAACTTTCGCTTCTACCC	>175()<>>1&','95'/A&3,/?315@,&/',,,&&5,3/&1)&1'1<'
+853_1232_940	141	*	0	0	*	*	0	0	GTTTTCCTGTGCCCGAACTCTTGGGGATTATTCGCCCCGAACGGTTCGTA	//&)3=65://7&/,1@15,)),33=1,<),,3(3?))//,),)6,39)'
+853_1236_169	73	chrM	3979	25	49M	=	3979	0	CTAGGAACTATAATCGTTATAATAAGCTCACACTGACTAATAATCTGAA	]]]JJRQNV]]WUOOYKR][$"!!SSXWIKTXXW[TNRGL]95KADHGM	XT:A:U	CM:i:0	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:49
+853_1236_169	133	chrM	3979	0	*	=	3979	0	GCCTCCAGCTTATATACTCGAGGAGGGATATATTGAACATAGGCTGGTTG	8>9<:6<,.&99864<;>2);=52,:<59/<67<*;<:&+9:6&2<<<:)
+853_1237_10	77	*	0	0	*	*	0	0	AACAGATAATACGGCCTGCTTTGAGGGCTAACTAAAATGGGTCAGCAAAC	(,,;/)&5/()&=)3(&;<:3)=3=)/=&=-.8,9;<=5;,&141<,;/<
+853_1237_10	141	*	0	0	*	*	0	0	TAGCATGCAGACGAGACGCTCCATTTACGGTCGAGAAGTTTAGGTAAGTT	6/<779>86=-4886:>:37==:1;729=2</===6:;,6/;66)((&14
+853_1242_1158	73	chrM	2264	37	49M	=	2264	0	CAATTTCGGTTGGGGTGACCTCGGAGAACAAAACAACCTCCGAGTGATT	][X]]]]]]]]]]X]]]\]]]]]]]]]]]]]]]]]]]]]]\OTRACKW]	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_1242_1158	133	chrM	2264	0	*	=	2264	0	GCCTTTCGAAGAGGGCCAGCGTCTACCAGACTAGCTTCCCTAGGAACAGC	=@<=;@@<>==A>>@>=>@=A:>@>???=&;)19(,,&+%+&(&3'3&,&
+853_1243_871	77	*	0	0	*	*	0	0	CTGCGGGTAACGGGATGGAGAACGATATTTGATGAAGGTGGACCAACCCG	1),)*=3/4=,9<?,%46//./+1,&1/1,)<)8&,/7(>79,);668);
+853_1243_871	141	*	0	0	*	*	0	0	TCTGAGACGGCAAGAGGTGAATCACAGATGGGCGTAAACCATTAACTTGC	1&?()&,1>>,(=&:88>/>7=1:77=118:75/988:57283/&))'**
+853_1265_969	77	*	0	0	*	*	0	0	CGGCTGGGGGGGCGTGATGCAACGTTAAAGGGAGGCTCTTGTCAAGAGAA	$<)'(')1.8:)()8(,&<//55,'&3,))'846164.001-/+381/72
+853_1265_969	141	*	0	0	*	*	0	0	AGACTCGGACGGCCGAGGTTACCCCCTTGTTCCCCGGGCGAGTCTACCCC	&82,4,54'),%&)'0('.9.$9',;1(#%88)*#8&(,%19,#,871*#
+853_1266_828	113	chrM	105	25	49M	=	1042	937	AATAAAATTACACATGCAAGTATCCGCACCCCAGTGAGAATGCCCTCTA	/3[X]KFLS]]]]]]]]]]][Z]]]]]]]]]]]]]][]]]]]]]]]]]]	XT:A:U	CM:i:1	SM:i:25	AM:i:25	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:4G44
+853_1266_828	177	chrM	1042	37	49M	=	105	-937	TAACCAAAGTGTAGCTTAAACAAAGCATCCAGCTTACACCTAGAAGATT	\Y]\]]]]]][]]WY]]]]]]]]]][[]]]]]]Y]]]]]W]][T]]]]]	XT:A:U	CM:i:0	SM:i:37	AM:i:25	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_1267_170	77	*	0	0	*	*	0	0	TGAAATCGGGTTTATGCCTATACCGAGACCGGGGACCAACTAGGGACGGG	30:65905%/#52:2&3(7,532).4;,,+&3$+-(2)50*&0%'&1(1'
+853_1267_170	141	*	0	0	*	*	0	0	GGAGTGGAGGTGGTCGCCCACCAAAAGGGCCAATTCCGTCGCCATCGCCT	&%%#+,4,##,,8.,%/#'*#72&-,.#*2123-&,4$2#,2(.(,,',#
+853_1277_1774	73	chrM	1180	37	49M	=	1180	0	CCATTAAAGTATAGGAGATAGAAATTTTAACTTGGCGCTATAGAGAAAG	]]]]]]]]]]]]]]]]]]]]]]TQXY]]XQZ]]][\\]ZVY]]YWX]]O	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_1277_1774	133	chrM	1180	0	*	=	1180	0	TCCCTTGACAACACGAATATAGCCAATTCTGCACTATCCTAAACATCACC	AA?=??>;<>>@;>A@>:?<,3%&1,,(89'92+4&0)-5+&1,/15%/,
+853_1278_1160	77	*	0	0	*	*	0	0	AAGAGCAATGGGAATGATCATGCCGCTGCGTAATGGAATGGAGTGGAGGG	A=<<@AA?>@@@?;?>:>A?>?AAA@7<<,,&//1(+)&9+&&&85(1&9
+853_1278_1160	141	*	0	0	*	*	0	0	GTAAATCCGACCCCTAAAGAGCCAAGAACCCTAACCAAGGGTCAAAAGAA	;AA==A?:A>?A<?;AA=;79?8><7@<:::8<=97=@9<953=A<8,>6
+853_1280_287	73	chrM	8561	37	49M	=	8561	0	AACTATCCTCGAATTCGCAGTAGCCATAATCCAAGCCTACGTATTCACT	]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]Y]]\]	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:24T24
+853_1280_287	133	chrM	8561	0	*	=	8561	0	GATCGTTCGCGAGCATCTGGCTTTCATGTATCTGAGGCAGCGCAGAGTGC	>?A??>A>@A?>@><>?><@>@?<@=@8@;@:>;<>/=6<8193@86,/)
+853_1280_1640	77	*	0	0	*	*	0	0	TGGTAAGACTCCTCCTTTCGGCCCCCAACCCCCCCCCCAACCGAGCTGCC	A;?<;<@<<>>A=44:??:<>:=74<:>48;=583==9/8=9:228122(
+853_1280_1640	141	*	0	0	*	*	0	0	GTTTCACCCCCGTCGATACATACTAAGACCTAACGTGCCCGAACAAAACG	8>*2#8+#%#3/##&=:#$.=2#+1<6&(%@1#($>)#'#8(&$+=&&$'
+853_1280_1971	77	*	0	0	*	*	0	0	TATTTGGTCAGGGGCGAGGGCGGCGGCTTCAATCTTGGGGCAGTGGGTTG	)9177)6,3)):16&'/,1:6<()?))()(>5><(1=<?1.&)>/6&(1,
+853_1280_1971	141	*	0	0	*	*	0	0	ATTTCCAAAGGTTCCTTGAGGAGAAGTGTAAACATTCTCAAGTCCACCAA	))(,8.)1)+/&',)*76&85:4'5$$'#2/&(/#.%#&4.'***-+'37
+853_1281_1171	117	chrM	4957	0	*	=	4957	0	TTCCTGATGAGGCAGCCTGGATGTATACTTGTGTGTACCACCTGATTGCT	'+)&%(%:2&'*151;3:<49>:=<:9;>><<?<=:/=A=?:<A;?<:@<
+853_1281_1171	153	chrM	4957	37	37M1D12M	=	4957	0	ATACTATCAATTCTGGACTAGGAATTTAGGTTAACATCCAGACCAAGAG	FSREOZRIHKRVVZ]WLR]]\YWZTW]]]YRZ]]]]\X]]VVY]]]]]]	XT:A:U	CM:i:2	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:1	XG:i:1	MD:Z:12T24^C12
+853_1289_1050	89	chrM	573	37	49M	=	573	0	TAGCAACAGCCTAAAACTCAAAGGACTTGGCGGTGCTTTACATCCCTCT	AFW2$ETYZPIR\]XKQ\XUTQ[[@F][]MJ[Z]XQNS]LBMT\XOUWU	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_1289_1050	181	chrM	573	0	*	=	573	0	TTTAACTGATTGCGGCGGACCGGTTATTGATATAAATGAACTCATGTAGC	%*&&$(+36274':;<:5=6;3;:9:675:<74;:?6=:7878:;>>57=
+853_1290_58	77	*	0	0	*	*	0	0	ATAAGAAGGGGGTTCAACGGAACCGTGAACGCCAACCGGAAGTTAATCCC	)<:<;9:>9:6==<90;<<9;;=98<;=<:1=<9.7<;6<1;>8;;<9<5
+853_1290_58	141	*	0	0	*	*	0	0	AGACACAGAAGAAAGACATCATCGACAGGTCCATCGTCGTATGCCAGAGC	:846:=:>;;>:9:=8=<=@:;;=;,:9?@;9;><3?=6<1=6=98:/:;
+853_1297_514	73	chrM	1985	37	49M	=	1985	0	GAGGCACTGCCTGCCCAGTGACATCTGTTTAAACGGCCGCGGTATCCTA	]]Z\]]][]]]]UU]]]][[]XLU]]\QR]]NLYY[XU]]\X\][YXNK	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_1297_514	133	chrM	1985	0	*	=	1985	0	CTAAGTGTGTAACAACCACCCAACACGGCACGTCAAGATGCGCCGATACG	8@8;9>795A<8=9:A?7;@;??;5:><886<;:=6:9:8.=@=:4:9==
+853_1297_1934	77	*	0	0	*	*	0	0	TAATTTAGGTACGACTAACTCAATAAGCTAATTGAATGAACTAGGACTTA	#&6##)0$)#4)#2##44&###7%/2##%1+#$,#*###$##5$#-###,
+853_1297_1934	141	*	0	0	*	*	0	0	TAGGGCTCACGGACTCCATCGCTACATCCCTCGGGGTGAAAGAAAACAAA	4*%#*,9)-*1751,197()*3-,#94&(-),$##.(#1/7%+#,0&,'0
+853_1311_394	73	chrM	7953	37	49M	=	7953	0	TTGAGAATCAAAATGAACGAAAATCTATTCGCCTCTTTCGCTACCCCAA	0JAJJLX33PV]]]][]]]]]]]]]]]]]]]]]]]]]]]RS]]]]]]NQ	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:49
+853_1311_394	133	chrM	7953	0	*	=	7953	0	GGAATTGCCGTCGCGCGCTAGTTGGTTGGGCGTGCATGTTTTGGGTGGGT	@=<><<?@?A<>?A>0(6)</.;<>:2<><07:<5(0;(4&&0;&.+1%/
+853_1312_213	77	*	0	0	*	*	0	0	TCGCGAAGGGGACCCGTTATTTTAATAGTGCAGGGCATAACATTTAAATA	6?;==?@<<==A=;=<;8;99:8:<6>:6;<=:3(9/7986)5(./27&=
+853_1312_213	141	*	0	0	*	*	0	0	GATTCGGACAGAGGGCGAGGCTAGAAGGGCGGAGGGGAGCGGAGGCGAGG	?>:<?=?@=@=>;<<<?<=>?9?=:@<;<6<><61:4,1(2.)2&&,+2&
+853_1321_1372	77	*	0	0	*	*	0	0	CTTTAGCTCGCCTCAATGACCCGAATAGCACCCAGAGCAAGACTCCGCAT	5,7),=/'16=1,,':&,5);118181/18<'6;6/1@9,<9)>,,,&>(
+853_1321_1372	141	*	0	0	*	*	0	0	TGGACTTCAGTGGCAAGGGCGTCTAAAAATTAAAAGCTACCGTCAAACGC	@A,>@(5);A&/6>>;??;7>9?19619>1=/<89<3;81>/=3>7/?/9
+853_1322_846	117	chrM	3881	0	*	=	3881	0	TTTTTTTCAAGTTTTCTCGGTTCGTTCGTCTTATTGGCTTAAATCCTCAG	7'8&:41-,72'$(6;-&$,5-('(4-0#;618,47-5)44#;5::;;;2
+853_1322_846	153	chrM	3881	37	49M	=	3881	0	AAATAAGCTATCGGGCCCATACCCCGAAAATGTTGGATTACACCCTTCC	]YSUOT]YV]]]]XVNP]]]][]]XTW]\\\]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:49
+853_1359_649	77	*	0	0	*	*	0	0	GGAGAGGGGCTGCAAAATTTACCGAGCTGCTTCGAGGAGAGCCAAGGCGA	<9;5<=;;::6;:;;1?88998<:>4:*91),4.5$7#,4'#$(,5.%)2
+853_1359_649	141	*	0	0	*	*	0	0	GACACCCGCTCGAATCCATACACGACATAAGGGGCCTCCTGTGGAAAGCA	7>=41=&7/-)&+,8)/:):7,:<7)/0<:&&;(4(&(86'953.3>'./
+853_1359_2004	117	chrM	8663	0	*	=	8663	0	CGCAGCTCGCCTCAGGAGCACTTTGGGACGCCGCTATTTGTGCTCCCTGG	,&94:;&75<=&898947:=>8<2?<><=>A?17;?<?.>>=A=@A<<=?
+853_1359_2004	153	chrM	8663	37	49M	=	8663	0	GCTTACCACATAGTAAACCCCAGCCCATGACCACTTACAGGAGCCCTAT	ZK!%VPT]]\]]]\\]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_1360_1130	77	*	0	0	*	*	0	0	TGCTTAGACTTTATTGCAGTCATAAATACCTATAATCCTTTGTGGTGACA	>A@@<9?A:?>>?8@68?=>>9>/9<<44193577>;:;8?#,5.##4,)
+853_1360_1130	141	*	0	0	*	*	0	0	CAGCTCCATAGCCAATCTATTGCTCACGCAGGTCCGCGCCTACGACGTAT	A@AA><:@8>@=AA@>8@A<?<@?@;=<A;A9=?A;<?>:>1>68<6?<;
+853_1361_389	117	chrM	15925	0	*	=	15925	0	ATCTTTGGCTTAATCCAGTTCTTAACGACGGGCATTCGTGATACAGCTGT	<94:)746=)9:6>)98798><<A=78A<=A?<A==:;7@>4?8>?=9=7
+853_1361_389	153	chrM	15925	37	49M	=	15925	0	ACTAATCAGCCCATGCTCACACATAACTGTGGTTTCATGCATTTGGTAT	VV]VYYS\[]RP]]]ZY]]]]]]]]]]]]XUY]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:31A17
+853_1366_1495	77	*	0	0	*	*	0	0	AACCATAAGGCGCTAACCACAATCGGTGACACCGGCTCCAAGCTTAGCCA	?;<9)6)&'&;+22'80:-%:&/3.<&)0(;):69;#)67;(8+&<-'%8
+853_1366_1495	141	*	0	0	*	*	0	0	CTTGAAACGGTACCAAAACCAAAGCGCAACCCTGTCCCGTAAATTTATAT	AA;>9>>:<<::?8;>7:>597<>/@6=:8>9=A/:;>:;/9==92/819
+853_1367_802	69	chrM	1422	0	*	=	1422	0	GTTGTTATAGAACAGTCAACCAGCACTGTCTAAGTGGATTTCCGTGGCGG	=<?;$%&<<&(5>='(3><+648A+*:<@#46><#70<>#*.<3237=;%
+853_1367_802	137	chrM	1422	37	49M	=	1422	0	ATTCATAGGTAGAGGTGAAAAGCCCAACGAGCCTGGTGATAGCTGGTTG	]]]]]]]]]]]]]]]]]]]]]][]]]]]]]]]]]]][]]]PEY]]]]ST	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:4G44
+853_1382_1227	73	chrM	682	25	49M	=	682	0	GCCTATATACCGCCATCTTCAGCAAACCCTAAACAAGGTACCAAAGTAA	]]]][Z[\][ZZ]]\XY]][[YY]]][]]UVRQ[[\TSXUVILYPKHS]	XT:A:U	CM:i:1	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:42G6
+853_1382_1227	133	chrM	682	0	*	=	682	0	CTTGTCCTCTATCATACCAATCTAACTCGACCTTTAGTCTCCTCTCCTCT	<;:99:98::8:#5:;:(7:6<#8<6:%0<89,5944,8:9:4/020*),
+853_1383_1269	77	*	0	0	*	*	0	0	GGGTGCTGCTGTCTCAACGGGCTGAGGGATAGCTGGTGGGAGCCCTTACC	,@)':/)>6:(*'*9&';-(:),4((/,#31;7&/532*8,5:5*75,+1
+853_1383_1269	141	*	0	0	*	*	0	0	CTATTGACCAACACAGTTCAAGCCAATTGAAATTAGACTCCCCAGGCGTT	/))3(<(152,3),<8:2)37;.6/&7$)1/,$0'%4$3&74).0&0%13
+853_1395_1324	77	*	0	0	*	*	0	0	ACTTTCGCGGCCAAGGCCTCCTCCCTAGGGCCTTCCCGACCCGCTGCGGG	)9-',&9*3)9',(1%6%7/4681)11&+:-1/4205()&3',,+$0#%%
+853_1395_1324	141	*	0	0	*	*	0	0	TAAGGAACCGCTCAACACTTATGGACTCGATCGGCCGCCGTGGTTGAGCC	4*,19./*)96*83;4,/1,)'27)2082,,'*6(&)&*%(*3422-+1+
+853_1396_1014	69	chrM	13417	0	*	=	13417	0	GGTCCCCTAGAGTGGGGCCTCGAACCTACAGATATTGAGTCGGGAGCCCG	@<@:===?<;==98<:9>9:=:;@;:;=68::<:::;>:::><<863>9;
+853_1396_1014	137	chrM	13417	37	49M	=	13417	0	CCAAAAATCAGCATCACTTCTACTAGACTCAATCTGACTAGAGAACATC	]]X]]]\Y]]]]Y]]][]]]][]]]]\]]]WR\]]YX]]]]]]]]QO]]	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:42A6
+853_1412_1664	89	chrM	2467	37	49M	=	2467	0	TAATGGTGCAACCGCTATTAAGGGTTCGTTTGTTCAACGATTAAAGTCT	WKT\NDIZ]NMRMTZ]]JH,/NDHHV]TTE>RZ]]XMVVSJJZMRYY]!	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:49
+853_1412_1664	181	chrM	2467	0	*	=	2467	0	TATACGACGAATCATTAGACCTCGGGTTGTGTTCAATTCCTGTCCAGATC	(&&&1.)0&1,&$31'.$1-&)#13,*%)+,'$/4,$$*/,5,765)545
+853_1413_877	77	*	0	0	*	*	0	0	GACGGTCGTCCCTATTGTATTCGTCTCTCCGTGTCGTGACGTTGCCCGGT	&)#*648#,9(.#3&&(#9.2,#/%3)#&555#).%3#19-4#4'3,#2+
+853_1413_877	141	*	0	0	*	*	0	0	AGGTCAGTTTCCAAGGTGGGGGTTGGCATTACGTACCATTCGATTAGATT	?A?<<;A><?;A=<;;>856/>#%###&###%####&&###$$$&#%#$$
+853_1437_116	77	*	0	0	*	*	0	0	AGCTGCGGCAGCCGAACACGGCACAAGGTTGGATAATCACCGGAAGTGGA	$;,)42'#2(#&,,#%#2,2%,',42#$))#*428#%$2.%$%4%*#)%&
+853_1437_116	141	*	0	0	*	*	0	0	CCCAAACCAGGCTCGTCCCCTTTAAGATAGTCTCGCCCCCCCTCAACTTG	6>>9;<@7=::=:>=544=54#'8&5-2)#(*)4,&%+#',2-&+&0-*2
+853_1437_1533	117	chrM	9411	0	*	=	9411	0	CGCAATTAAACTTAATGCGACATAAATAGCGGCATCGGACCTCCATACTG	#%*(4-#(4%$#$&4+*2586;9A<89:><5=?>;=?>=:<=8>>:?<@>
+853_1437_1533	153	chrM	9411	25	49M	=	9411	0	TCTATTGATGAGGATCCTATTCTTTTAGTATTGACCAGTACAATTGACT	]]]]]VV]UY]][]]VX]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:1	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:1T47
+853_1486_1272	89	chrM	9431	23	49M	=	9431	0	TCTTTTAGTATTGACCAGTACAATTGACTTCCAATCAATCAGCTTCGGT	NHVQR]SN\][RQO@MTMYUVVT]SU]]OJYYXVSSKOSSTRS]]XUOU	XT:A:U	CM:i:0	SM:i:23	AM:i:0	X0:i:1	X1:i:1	XM:i:0	XO:i:0	XG:i:0	MD:Z:49	XA:Z:chrM,-9432,1S48M,3;
+853_1486_1272	181	chrM	9431	0	*	=	9431	0	ACTATGAAAAGCCTCCCGACGCAAGAAAGCATTCACGATATGGACATAGC	22%-,))%99<168=961#151,#/9(3%89/76:7)55965689<<7(7
+853_1487_496	77	*	0	0	*	*	0	0	TTTATTACGGGCGACGAAACGAATGGTATTTCCCTTGCGTTTTTCGCTTG	<,'+856638:)0*.,+&.;7&1+;5-&1779<0:+3)/&+;1&,7()((
+853_1487_496	141	*	0	0	*	*	0	0	GTCGCACCCCTCCTAAACCCCAGATCAAAAACTGCACCCGCGACCCACTC	6969=651<=::86774;7:<9=/69>0366/8,,8=:</6&31(3,/&)
+853_1488_605	77	*	0	0	*	*	0	0	CCCGTAAGGAACGGGGATTAGAAGGATGGCAGGGGAGTGGAAACGAAGGG	(%/)'(32+'))1*6776&2%)8&,7)71'2&$5+%))724&0)$('&('
+853_1488_605	141	*	0	0	*	*	0	0	TCGCCGCCAAACGATGCACTAATTTGCTTACCGGCCAGGCACGGATCGAA	0)&)&1)/1(6)&(+),1=/*&&(&41,',)&1/(/,9/)1//<)&:15,
+853_1489_374	69	chrM	14307	0	*	=	14307	0	CTCTTCAAACTGACAGCGCAATGGATGAGGCCACAAAAAGAAACTTTAAA	>8786=:8:3:2;;;6(=99.3=5*/,%'(+#7121074(25$0,+%,27
+853_1489_374	137	chrM	14307	37	49M	=	14307	0	CCTAATCCTCCAAATCCTAACAGGCCTATTCCTAGCCATACACTACACA	]][NR]Z]]]]]]]]YXWQY]]WZ[\]]]PT]]]PU]]]X[]XR]]]]\	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:16T32
+853_1493_452	77	*	0	0	*	*	0	0	CGCTCTCCCGATTCAGCAAAACAAACAAGGCTCCACCGTCCCGGGGCCGA	'$),&/'53(%$((6'*'(&+%694&(2.1'&1(3&2'9/%)(&)()'(/
+853_1493_452	141	*	0	0	*	*	0	0	GAAAGGACCAAACCAGGAGCATCCACCCATGGCCGCTAAACTAGGAGGAG	$*)&'#,,,##(*#'%#%##(#))###%$$$##%###$#)###'#%%(%#
+853_1493_1908	117	chrM	14920	0	*	=	14920	0	TTGTGGTATAAAGGACACGCCTTGGTGGCCAAGTTGTCAACGTAATCATG	;<<9:=7<;;9<?=<;9<<=<88?>==;?<==;;=><;===:::>?;<@;
+853_1493_1908	153	chrM	14920	37	49M	=	14920	0	TTCTCCCCTGACCTCCTAGGAGACCCAGACAACTACACCCCAGCTAACC	YY[]]ZX]]YYY[]]]]]]][\]]]]]]]]]]]]]]]]]]]]]]]]]]]	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:8C40
+853_1498_1797	77	*	0	0	*	*	0	0	CCTCAGCGCCACCCAGCTTGGAAAACTAAACAAACAAATAAACTTTCACT	&&&&&#&#######&$##&########$&$###&$$$###$$#$#$####
+853_1498_1797	141	*	0	0	*	*	0	0	TGAAGGTCGCATGGCGCGGATTGCACAGCAGATCAACTGTTTCAAAAACA	3=#&&04&',.8#*&-:&.*./$'#);%.$21'0&&/&###4$&%%0$#$
+853_1499_1261	117	chrM	2408	0	*	=	2408	0	TTTCATTTAACACCGGGAATGGTTCACAATCAATGCCCGAGCAGCACAGT	/2&7=)6&?<)/56<9:<9:7&;7<:<9<89;>9A><>>?5<<;=<=:;:
+853_1499_1261	153	chrM	2408	37	49M	=	2408	0	ATTCCAGAGTCCATATCGACAATTAGGGTTTACGACCTCGATGTTGGAT	]/4ZY]\\QT]KO]]YMXZ[WOMN]]TW]]]\VSYQSSQXVWQT[RY]]	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_1509_820	77	*	0	0	*	*	0	0	GCAACCTGACCGTTTACACAACGTGTGGAAAAGAGGTGGGAGAGGGTTGG	18;:.49;5+6/<=879672373=.:;;47$'%06262%562%':5$5&:
+853_1509_820	141	*	0	0	*	*	0	0	ACAAGAGACTACGAGGACACACTCCGGCCCTAAATCGCGAAAAACGGCCC	',.1438/1)&1*3.18,72875),/*&://.4&),+/#+3%5*)56((&
+853_1510_448	117	chrM	982	0	*	=	982	0	CCGCACCGGGCAGCAGCCAGGAGGATTATGGGGTACCTGATGTTGTTTGT	##$########''%$+'4)%0%34)82'2,(/27/,*:4'2177460826
+853_1510_448	153	chrM	982	37	49M	=	982	0	CCAAACATATGAAAGGAGACAAGTCGTAACAAGGTAAGTATACCGGAAG	QSZ\WTIO[MGR[]]UO]]Y[WWYTSPY]Y[X]]XZV[]TRU[Z\[Z]$	XT:A:U	CM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:49
+853_1511_561	73	chrM	1971	37	1M1D48M	=	1971	0	CTTCCCAGTATTAGAGGCACTGCCTGCCCAGTGACATCTGTTTAAACGG	!!\]]]]]\]ZW[]]QQ]]]Z]]UT[]]]]]]]]]V[]]]SAMXYTTXK	XT:A:U	CM:i:2	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:1	XG:i:1	MD:Z:1^A2T45
+853_1511_561	133	chrM	1971	0	*	=	1971	0	GCAAACCGTTCTGATGTAAACAACGTCAATTTGGGCCTTTACAAAGCGTT	?A===@A?><A8A>:>9;;=@828;'#+99:#'9;;4#>6-1/89,-&45
+853_1511_1886	77	*	0	0	*	*	0	0	GGATAGTAGGAACGAGATGCGGGGAACCCGTTTGGTGCTCGGCGGGTGTG	:A(>/2;&>='7&>::(1678>>:1&(<::11,.<8,(),8>%8</):(<
+853_1511_1886	141	*	0	0	*	*	0	0	GACGTCGTCGTCGTCGTCGTTAACCCTAAGGTTCGCGGGACCCCTCAACA	99;<=:>?<;=8;>=;8=<==9:8::==:9,8?:;)0<6.13;+:*5/:)
+853_1530_202	77	*	0	0	*	*	0	0	GGTTCATGGCGGGACATGAGGTGCCATACCGCAACCCTCTAGGCTGATCG	/9::8:7;58;0<%;;9=(3;8<1;73;16;1=57686/585:30;/<61
+853_1530_202	141	*	0	0	*	*	0	0	GGGGACTGAAGAGCGGCCATTAAGGGAGAATTGAGGAGAAGAGATGAGAA	;<;99=:99>6>8:8<?:898A=2<7@88>)6#/+,&)(#,'-%#+-*%(
+853_1530_1652	117	chrM	5148	0	*	=	5148	0	AGATTCCGGCATTTCAGCTAGTGCCTGCCCAGCCGTATATATTCGGCAAA	+$5/5&$4982/;*;5#:3;(%;:;0'<7952:561);57)#<0-%6;58
+853_1530_1652	153	chrM	5148	23	49M	=	5148	0	AATTTTAGTTAACAGCTAAATACCCTAATCAACTGGCTTCAATCTACTT	DM[\UX]]\V[]]]]]]]]]]Z]]]]]]]]]]]]\]][]]]]]]]]]]\	XT:A:U	CM:i:0	SM:i:23	AM:i:0	X0:i:1	X1:i:1	XM:i:0	XO:i:0	XG:i:0	MD:Z:49	XA:Z:chrM,-5149,1S48M,3;
+853_1569_1617	73	chrM	15857	37	10M1D39M	=	15857	0	TTCAGGGCCATCCCACCCAACCTCGCCCATTCTTTCCCCTTAAATAAGA	]]]]]]]]]]]]]]]]]]]]]]]]WX]]]\Z[]]QO]]\OQUSWMNK5I	XT:A:U	CM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:1	XG:i:1	MD:Z:10^T39
+853_1569_1617	133	chrM	15857	0	*	=	15857	0	TAATTGTATATAAATGCTGCATGCCGGGAAATTGTGCAGCTACGTGGAAG	<A@=>?><<>=@@?=@?;=<=<9A<==;AA>;57:<?<;75>67695@:6
+853_1570_1472	77	*	0	0	*	*	0	0	CACCGGGACTAAATTAGCTTCTCGTTCCAGGCGCATCGGACTCACGTTAT	@A=?<A?@?A=9=AA=@=;>?>?<@=><=:<@9=,A?;<<7<=61;>9/?
+853_1570_1472	141	*	0	0	*	*	0	0	CGACGCACGTCCGCAGGTACCAGGAACGTCATCCGTAACCGCGGGCACGC	<=<>==;=:@>@<@==AA?A@>A?@<@?=A9>@?;>=9?<9>A>><3;=7
+853_1585_323	73	chrM	8665	25	49M	=	8665	0	TTACCACATAGTAAACCCCAGCCCATGACCACTTACAGGGGCCCTATCA	#"]\X]]]]]]]\]]Y[]]]QO]]\PPYZ]\Y\WXULU]PDPYVVSIQ\	XT:A:U	CM:i:1	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:39A9
+853_1585_323	133	chrM	8665	0	*	=	8665	0	CAAGGGACTATAACTGAGGGGTGTGGAGCGGTTGGTTGGCCAGCGCATTA	<;:>?<0<;;=;9781&(,95'+$-+2#,#'',1',$,$1/5+#2)6%&(
+853_1585_2023	77	*	0	0	*	*	0	0	AATAAATATTACCATTTAAGAAGGAATACGAAAAGACGCCGGCGTCCACT	:A=>5#:==<+=<==)=?<=&<=<>%<<?;)<=<=#>9<:$<;;:&?3<5
+853_1585_2023	141	*	0	0	*	*	0	0	AGGGGGATGCAGGCAAGACAAACGGCACGGGCGTGGGGAGAGGTCCCAAG	?>@A>=44@@8<5A<7>:=?577<?867=>4588>:;88<59;<=:;)9=
+853_1603_500	89	chrM	13884	25	49M	=	13884	0	CTCAGTAGCTATAGCCGTTGTATAACCAAAAACAACCAACATTCCTCCC	,T]YOQSTUSUY[\XU[]]ZZTY][]]]]]][\]\]]]]ZVX]WZ]]]]	XT:A:U	CM:i:1	SM:i:25	AM:i:0	X0:i:1	X1:i:0	XM:i:3	XO:i:0	XG:i:0	MD:Z:9C39
+853_1603_500	181	chrM	13884	0	*	=	13884	0	AACAGGCCGACTTTGGTCCAGGGGAAACGTTTGGTGACTCAGAATAGGTC	%/06321266(/.:504#:7(&,9:39544<<8<95<2>:8<8:=87:<:
+853_1603_1995	77	*	0	0	*	*	0	0	CCAGGGAGATCCTAACGTGGAGCCGCGAATACTCCCAACCACCTATACAG	:;;;>=<9A==;9:=;6::?:9@<@:8<<;:6><@<<9;@595:684279
+853_1603_1995	141	*	0	0	*	*	0	0	CTGGTACCGGTATGAGCCTAGGATAGAGCGGCAACTCTTATACTGCCGGT	9=:8;>>=<==<<>=AA@><A><<=?>?=<<??<<;?;;?<86=<9?=3;
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/bwa_wrapper_out8.sam	Fri Sep 28 13:53:48 2012 -0400
@@ -0,0 +1,60 @@
+seq1	113	phiX174	340	37	18M	=	322	-18	GGATTACTATCTGAGTCC	II9(.+5$IIIIIII#II	XT:A:U	NM:i:0	SM:i:37	AM:i:25	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:18
+seq1	177	phiX174	322	25	18M	=	340	18	GATATTTTAAAGGAGCGT	B&&I13A$G$*%$IIIII	XT:A:U	NM:i:2	SM:i:25	AM:i:25	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:2C8A6
+seq10	129	phiX174	4168	37	18M	=	4149	-19	AGGGCGTTGAGTTCGATA	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:0	SM:i:37	AM:i:25	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:18
+seq10	65	phiX174	4149	25	18M	=	4168	19	ATTCTTTCTTTTCGTATC	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:2	SM:i:25	AM:i:25	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:5G11G0
+seq11	129	phiX174	4091	37	18M	=	4072	-19	ATCCCCAATGCTTGGCTT	IIIII$%*$G$A31I&&B	XT:A:U	NM:i:0	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:18
+seq11	65	phiX174	4072	37	18M	=	4091	19	GCATTTCTACTCCTTCTC	II#IIIIIII$5+.(9II	XT:A:U	NM:i:1	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:12T5
+seq12	129	phiX174	5365	25	18M	=	5349	-16	GGATTGGCGTTTCCAACC	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:2	SM:i:25	AM:i:25	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:0T9A7
+seq12	65	phiX174	5349	37	18M	=	5365	16	CGCGCTTCGATAAAAATG	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:0	SM:i:37	AM:i:25	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:18
+seq13	129	phiX174	4093	25	18M	=	4074	-19	CCCCAATCCTTGCCTTCC	IIIAAIIIIIIIIIIIII	XT:A:U	NM:i:2	SM:i:25	AM:i:25	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:7G4G5
+seq13	65	phiX174	4074	37	18M	=	4093	19	ATTTCTACTCTTTCTCAT	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:1	SM:i:37	AM:i:25	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:17A0
+seq14	129	phiX174	4016	37	3M1D15M	=	3998	-18	TGATATTTTGACTTTGAG	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:1	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:0	XO:i:1	XG:i:1	MD:Z:3^T15
+seq14	65	phiX174	3998	37	18M	=	4016	18	CCCTTTTGAATGTCACGC	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:1	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:5C12
+seq15	129	phiX174	5216	37	5M2I11M	=	5198	-18	TTACGAAACGCGACGCCG	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:2	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:0	XO:i:1	XG:i:2	MD:Z:16
+seq15	65	phiX174	5198	37	18M	=	5216	18	CCAACTTACCAAGGTGGG	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:1	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:13C4
+seq16	129	phiX174	2897	37	18M	=	2880	-17	TTATTTTTCTCCAGCCAC	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:1	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:6G11
+seq16	65	phiX174	2880	37	10M1I7M	=	2897	17	TCAGGGTATTAAAAGAGA	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:2	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:1	XO:i:1	XG:i:1	MD:Z:5T11
+seq17	129	phiX174	3053	25	18M	=	3034	-19	AAACAATACTTTAGGCAT	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:2	SM:i:25	AM:i:25	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:0T9G7
+seq17	65	phiX174	3034	37	18M	=	3053	19	GTGATGTGCTTGCTACCG	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:0	SM:i:37	AM:i:25	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:18
+seq18	133	phiX174	4088	0	*	=	4088	0	CCGTTCCATAAGCAGATG	IIIIIIIIIIIIIIIIII
+seq18	73	phiX174	4088	37	18M	=	4088	0	TCAATCCCCCATGCTTGG	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:9A8
+seq19	129	phiX174	3324	37	18M	=	3304	-20	GAGCGTCCTGGTGCTGAT	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:1	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:6G11
+seq19	65	phiX174	3304	37	18M	=	3324	20	TTCCTGCGCTTAATGCTT	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:1	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:6A11
+seq2	129	phiX174	159	37	18M	=	141	-18	CAGCTCGAGAAGCTCTTA	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:0	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:18
+seq2	65	phiX174	141	37	18M	=	159	18	ATTCGACCTATCCTTGCG	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:0	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:18
+seq20	129	phiX174	1100	37	18M	=	1082	-18	ACTCCGGTTATCGCTGGC	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:0	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:18
+seq20	65	phiX174	1082	37	18M	=	1100	18	CTTATTACCATTTCAACT	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:0	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:18
+seq21	129	phiX174	1363	37	18M	=	1344	-19	TAAGCATTTGGTTCAGGG	IIIII$%*$G$A31I&&B	XT:A:U	NM:i:1	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:10T7
+seq21	65	phiX174	1344	37	18M	=	1363	19	CTGATACCAATAAAACCC	II#IIIIIII$5+.(9II	XT:A:U	NM:i:1	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:15T2
+seq22	137	phiX174	5215	37	18M	=	5215	0	GTTACGACGCGACGCCGT	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:0	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:18
+seq22	69	phiX174	5215	0	*	=	5215	0	AATCAAACTTACCAAGGG	IIIIIIIIIIIIIIIIII
+seq23	129	phiX174	4308	25	18M	=	4289	-19	TTTAATAACCCTATAGAC	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:2	SM:i:25	AM:i:25	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:0A8A8
+seq23	65	phiX174	4289	37	18M	=	4308	19	TGTGCTTCCCCAACTTGA	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:1	SM:i:37	AM:i:25	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:6C11
+seq24	129	phiX174	4101	37	18M	=	4084	-17	CTTGGCTTCCCTAAGCAG	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:1	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:10A7
+seq24	65	phiX174	4084	37	18M	=	4101	17	TTTCTCAATCCCCAATGC	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:0	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:18
+seq25	129	phiX174	537	37	18M	=	520	-17	CGTGCTCGTTGCTGCGTT	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:1	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:9C8
+seq25	65	phiX174	520	37	18M	=	537	17	TTGCTACTGACCGCTCTT	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:1	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:17C0
+seq26	129	phiX174	1994	37	18M	=	1976	-18	AAGGATGTTTTCCGTTCT	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:0	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:18
+seq26	65	phiX174	1976	37	18M	=	1994	18	CCGCGTGAAATTTCTATG	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:0	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:18
+seq27	129	phiX174	2614	37	3M1D15M	=	2598	-16	TGTTTGGTGCTGATATTG	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:2	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:0	XO:i:1	XG:i:1	MD:Z:1C1^G15
+seq27	65	phiX174	2598	37	18M	=	2614	16	CGCTAATCAAGTTGTTTC	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:1	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:9G8
+seq28	129	phiX174	2906	37	18M	=	2890	-16	TCCAGCCACTAAAGTGAG	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:1	SM:i:37	AM:i:25	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:10T7
+seq28	65	phiX174	2890	25	18M	=	2906	16	AAAGAGATTATTTGTCGG	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:2	SM:i:25	AM:i:25	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:16T0C0
+seq29	133	phiX174	5339	0	*	=	5339	0	GATAATGATTGGGGTATC	IIIIIIIIIIIIIIIIII
+seq29	73	phiX174	5339	37	18M	=	5339	0	CAAATTAATGCGCGCTTC	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:6T11
+seq3	129	phiX174	523	37	18M	=	505	-18	CTACTGACCGCTCTCGTG	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:0	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:18
+seq3	65	phiX174	505	37	18M	=	523	18	GTAACAAAGTTTGGATTG	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:0	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:18
+seq30	129	phiX174	4108	37	18M	=	4091	-17	ACCATAAGCAGATGGATA	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:1	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:0T17
+seq30	65	phiX174	4091	37	18M	=	4108	17	ATCCCCTATGCTTGGCTT	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:1	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:6A11
+seq4	137	phiX174	945	37	18M	=	945	0	TAGGTGGTCAACCATTTT	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:12A5
+seq4	69	phiX174	945	0	*	=	945	0	AGCCGCTCGTCTTTTATG	IIIIIIIIIIIIIIIIII
+seq5	129	phiX174	5003	37	18M	=	4985	-18	TTTCTATGTGGCTTAATA	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:1	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:13A4
+seq5	65	phiX174	4985	37	18M	=	5003	18	CAGTTATATGGCTTTTGG	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:1	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:13G4
+seq6	129	phiX174	944	37	18M	=	925	-19	GTAGGTGGTCAACAATTT	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:0	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:18
+seq6	65	phiX174	925	37	11M1D7M	=	944	19	AGGCGCTCGTCTTGGTAT	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:1	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:0	XO:i:1	XG:i:1	MD:Z:11^T7
+seq7	129	phiX174	960	37	18M	=	943	-17	TTTAATTGCAGGGGCTTC	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:0	SM:i:37	AM:i:25	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:18
+seq7	65	phiX174	943	25	18M	=	960	17	TGTAGGTGGTCAACCAAT	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:2	SM:i:25	AM:i:25	X0:i:1	X1:i:0	XM:i:2	XO:i:0	XG:i:0	MD:Z:14A1T1
+seq8	137	phiX174	1715	37	18M	=	1715	0	ATGCGCTCTATTCTCTGG	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:1	SM:i:37	AM:i:0	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:10A7
+seq8	69	phiX174	1715	0	*	=	1715	0	ACACCCGTCCTTTACGTC	IIIIIIIIIIIIIIIIII
+seq9	129	phiX174	2613	37	18M	=	2596	-17	TTCTGTTGGTGCTGATAT	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:0	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:0	XO:i:0	XG:i:0	MD:Z:18
+seq9	65	phiX174	2596	37	18M	=	2613	17	GCCGCTATTCAGGTTGTT	IIIIIIIIIIIIIIIIII	XT:A:U	NM:i:1	SM:i:37	AM:i:37	X0:i:1	X1:i:0	XM:i:1	XO:i:0	XG:i:0	MD:Z:7A10
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/chr_m.fasta	Fri Sep 28 13:53:48 2012 -0400
@@ -0,0 +1,335 @@
+>chrM
+GTTAATGTAGCTTAATAATATAAAGCAAGGCACTGAAAATGCCTAGATGA
+GTATTCTTACTCCATAAACACATAGGCTTGGTCCTAGCCTTTTTATTAGT
+TATTAATAGAATTACACATGCAAGTATCCGCACCCCAGTGAGAATGCCCT
+CTAAATCACGTCTCTACGATTAAAAGGAGCAGGTATCAAGCACACTAGAA
+AGTAGCTCATAACACCTTGCTCAGCCACACCCCCACGGGACACAGCAGTG
+ATAAAAATTAAGCTATGAACGAAAGTTCGACTAAGTCATATTAAATAAGG
+GTTGGTAAATTTCGTGCCAGCCACCGCGGTCATACGATTAACCCAAATTA
+ATAAATCTCCGGCGTAAAGCGTGTCAAAGACTAATACCAAAATAAAGTTA
+AAACCCAGTTAAGCCGTAAAAAGCTACAACCAAAGTAAAATAGACTACGA
+AAGTGACTTTAATACCTCTGACTACACGATAGCTAAGACCCAAACTGGGA
+TTAGATACCCCACTATGCTTAGCCCTAAACTAAAATAGCTTACCACAACA
+AAGCTATTCGCCAGAGTACTACTAGCAACAGCCTAAAACTCAAAGGACTT
+GGCGGTGCTTTACATCCCTCTAGAGGAGCCTGTTCCATAATCGATAAACC
+CCGATAAACCCCACCATCCCTTGCTAATTCAGCCTATATACCGCCATCTT
+CAGCAAACCCTAAACAAGGTACCGAAGTAAGCACAAATATCCAACATAAA
+AACGTTAGGTCAAGGTGTAGCCCATGGGATGGAGAGAAATGGGCTACATT
+TTCTACCCTAAGAACAAGAACTTTAACCCGGACGAAAGTCTCCATGAAAC
+TGGAGACTAAAGGAGGATTTAGCAGTAAATTAAGAATAGAGAGCTTAATT
+GAATCAGGCCATGAAGCGCGCACACACCGCCCGTCACCCTCCTTAAATAT
+CACAAATCATAACATAACATAAAACCGTGACCCAAACATATGAAAGGAGA
+CAAGTCGTAACAAGGTAAGTATACCGGAAGGTGTACTTGGATAACCAAAG
+TGTAGCTTAAACAAAGCATCCAGCTTACACCTAGAAGATTTCACTCAAAA
+TGAACACTTTGAACTAAAGCTAGCCCAAACAATACCTAATTCAATTACCC
+TTAGTCACTTAACTAAAACATTCACCAAACCATTAAAGTATAGGAGATAG
+AAATTTTAACTTGGCGCTATAGAGAAAGTACCGTAAGGGAACGATGAAAG
+ATGCATTAAAAGTACTAAACAGCAAAGCTTACCCCTTTTACCTTTTGCAT
+AATGATTTAACTAGAATAAACTTAGCAAAGAGAACTTAAGCTAAGCACCC
+CGAAACCAGACGAGCTACCTATGAACAGTTACAAATGAACCAACTCATCT
+ATGTCGCAAAATAGTGAGAAGATTCGTAGGTAGAGGTGAAAAGCCCAACG
+AGCCTGGTGATAGCTGGTTGTCCAGAAACAGAATTTCAGTTCAAATTTAA
+ATTTACCTAAAAACTACTCAATTCTAATGTAAATTTAAATTATAGTCTAA
+AAAGGTACAGCTTTTTAGATACAGGTTACAACCTTCATTAGAGAGTAAGA
+ACAAGATAAACCCATAGTTGGCTTAAAAGCAGCCATCAATTAAGAAAGCG
+TTCAAGCTCAACGACACATCTATCTTAATCCCAACAATCAACCCAAACTA
+ACTCCTAATCTCATACTGGACTATTCTATCAACACATAGAAGCAATAATG
+TTAATATGAGTAACAAGAATTATTTCTCCTTGCATAAGCTTATATCAGAA
+CGAATACTCACTGATAGTTAACAACAAGATAGGGATAATCCAAAAACTAA
+TCATCTATTTAAACCATTGTTAACCCAACACAGGCATGCATCTATAAGGA
+AAGATTAAAAGAAGTAAAAGGAACTCGGCAAACACAAACCCCGCCTGTTT
+ACCAAAAACATCACCTCTAGCATTTCCAGTATTAGAGGCACTGCCTGCCC
+AGTGACATCTGTTtaaacggccgcggtatcctaaccgtgcaaaggtagca
+taatcacttgttccctaaatagggacttgtatgaatggccacacgagggt
+tttactgtctcttacttccaatcagtgaaattgaccttcccgtgaagagg
+cgggaatgactaaataagacgagaagaccctatggagcttTAATTAACTG
+ATTCACAAAAAACAACACACAAACCTTAACCTTCAGGGACAACAAAACTT
+TTGATTGAATCAGCAATTTCGGTTGGGGTGACCTCGGAGAACAAAACAAC
+CTCCGAGTGATTTAAATCCAGACTAACCAGTCAAAATATATAATCACTTA
+TTGATCCAAACCATTGATCAACGGAACAAGTTACCCTAGGGATAACAGCG
+CAATCCTATTCCAGAGTCCATATCGACAATTAGGGTTTACGACCTCGATG
+TTGGATCAAGACATCCTAATGGTGCAACCGCTATTAAGGGTTCGTTTGTT
+CAACGATTAAAGTCTTACGTGATCTGAGTTCAGACCGGAGTAATCCAGGT
+CGGTTTCTATCTATTCTATACTTTTCCCAGTACGAAAGGACAAGAAAAGT
+AGGGCCCACTTTACAAGAAGCGCCCTCAAACTAATAGATGACATAATCTA
+AATCTAACTAATTTATAACTTCTACCGCCCTAGAACAGGGCTCgttaggg
+tggcagagcccggaaattgcataaaacttaaacctttacactcagaggtt
+caactcctctccctaacaacaTGTTCATAATTAACGTCCTCCTCCTAATT
+GTCCCAATCTTGCTCGCCGTAGCATTCCTCACACTAGTTGAACGAAAAGT
+CTTAGGCTATATGCAACTTCGCAAAGGACCCAACATCGTAGGCCCCTATG
+GCCTACTACAACCTATTGCCGATGCCCTCAAACTATTTATCAAAGAGCCA
+CTACAACCACTAACATCATCGACATCCATATTCATCATCGCACCAATCCT
+AGCCCTAACCCTGGCCTTAACCATATGAATCCCTCTGCCCATACCATACC
+CACTAATCAACATAAACCTAGGAATTCTATTCATACTAGCCATGTCCAGC
+CTAGCTGTCTACTCAATCCTTTGATCAGGATGGGCCTCAAACTCAAAATA
+CGCCCTAATTGGAGCTCTACGAGCAGTAGCACAAACCATCTCATACGAAG
+TAACTCTAGCAATCATCCTACTCTCAGTCCTCCTAATAAGCGGATCATTC
+ACATTATCAACACTTATTATTACCCAAGAATACCTCTGATTAATCTTCCC
+ATCATGACCCTTAGCCATAATGTGATTCATCTCAACATTAGCCGAAACCA
+ACCGAGCTCCATTTGACCTAACAGAAGGAGAATCAGAACTCGTCTCTGGA
+TTCAACGTTGAATACGCAGCCGGCCCATTTGCTCTATTCTTCCTAGCAGA
+ATACGCAAACATCATCATGATAAACATCTTCACAACAACCCTATTTCTAG
+GAGCATTTCACAACCCCTACCTGCCAGAACTCTACTCAATTAATTTCACC
+ATTAAAGCTCTCCTTCTAACATGTTCCTTCCTATGAATCCGAGCATCCTA
+CCCACGATTCCGATATGACCAACTTATACACCTCCTATGAAAGAACTTCC
+TACCACTCACACTAGCCCTCTGCATATGACACGTCTCACTTCCAATCATA
+CTATCCAGCATCCCACCACAAACATAGGAAATATGTCTGACAAAAGAGTT
+ACTTTGATAGAGTAAAACATAGAGGCTCAAACCCTCTTATTTctagaact
+acaggaattgaacctgctcctgagaattcaaaatcctccgtgctaccgaa
+ttacaccatgtcctaCAAGTAAGGTCAGCTAAATAAGCTATCGGGCCCAT
+ACCCCGAAAATGTTGGATTACACCCTTCCCGTACTAATAAATCCCCTTAT
+CTTCACAACTATTCTAATAACAGTTCTTCTAGGAACTATAATCGTTATAA
+TAAGCTCACACTGACTAATAATCTGAATCGGATTTGAAATAAATCTACTA
+GCCATTATCCCTATCCTAATAAAAAAGTACAATCCCCGAACCATAGAAGC
+CTCCACCAAATATTTTCTAACCCAAGCCACCGCATCAATACTCCTCATAA
+TAGCGATCATCATTAACCTCATACACTCAGGCCAATGAACAATCACAAAA
+GTCTTCAACCCCACAGCGTCCATCATTATAACTTCAGCTCTCGCCATAAA
+ACTTGGACTCACACCATTCCACTTCTGAGTACCCGAAGTCACACAGGGCA
+TCTCATTAACATCAGGTCTCATCCTACTTACATGACAAAAACTAGCCCCA
+ATATCAATCCTATATCAAATCTCACCCTCAATTAACCTAAATATCTTATT
+AACTATAGCCGTACTGTCAATCCTAGTAGGAGGCTGAGGCGGTCTCAACC
+AAACCCAACTACGAAAAATCATAGCATACTCGTCAATCGCGCATATAGGA
+TGAATAACAGCTGTCCTAGTATATAACCCAACACTAACAATACTAAACAT
+ATTAATTTACATTATAATAACACTCACAATATTCATACTATTTATCCACA
+GCTCCTCTACTACAACACTATCACTCTCCCACACATGAAACAAAATACCT
+CTAACCACTACACTAATCTTAATTACCTTACTATCCATAGGAGGCCTCCC
+CCCACTATCAGGATTCATACCCAAATGAATAATCATTCAAGAGCTCACCA
+AAAATAGCAGCATCATCCTCCCCACACTAATAGCCATTATAGCACTACTC
+AACCTCTACTTCTACATACGACTAACCTATTCCACCTCACTGACCATATT
+CCCATCCACAAACAACATAAAAATAAAATGACAATTCGAAACCAAACGAA
+TTACTCTCTTACCCCCGTTAATTGTTATATCCTCCCTACTCCTCCCCCTA
+ACCCCCATACTATCAATTTTGGACTAGGAATTTAGGTTAACATCCCAGAC
+CAAGAGCCTTCAAAGCTCTAAGCAAGTGAATCCACTTAATTCCTGCATAC
+TAAGGACTGCGAGACTCTATCTCACATCAATTGAACGCAAATCAAACTCT
+TTTATTAAGCTAAGCCCTTACTAGATTGGTGGGCTACCATCCCACGAAAT
+TTTAGTTAACAGCTAAATACCCTAATCAACTGGCTTCAATCTACTTCTCC
+CGCCGCCTAGAAAAAAAGGCGGGAGAAGCCCCGGCAGAAATTGAAGCTGC
+TCCTTTGAATTTGCAATTCAATGTGAAAATTCACCACGGGACTTGATAAG
+AAGAGGATTCCAACCCCTGTCTTTAGATTTACAGTCTAATGCTTACTCAG
+CCATCTTACCTATGTTCATCAACCGCTGACTATTTTCAACTAACCACAAA
+GACATCGGCACTCTGTACCTCCTATTCGGCGCTTGAGCTGGAATAGTAGG
+AACTGCCCTAAGCCTCCTAATCCGTGCTGAATTAGGCCAACCTGGGACCC
+TACTAGGAGATGATCAGATCTACAATGTCATTGTAACCGCCCATGCATTC
+GTAATAATTTTCTTTATGGTCATACCCATTATAATCGGAGGATTCGGAAA
+CTGATTAGTCCCCCTGATAATTGGAGCACCTGATATAGCTTTCCCCCGAA
+TAAACAACATAAGCTTCTGATTACTTCCCCCATCATTCCTACTTCTTCTC
+GCTTCCTCAATAATTGAAGCAGGTGCCGGAACAGGCTGAACCGTATATCC
+TCCTCTAGCTGGAAATCTGGCGCATGCAGGAGCCTCTGTTGACTTAACCA
+TTTTCTCTCTCCACCTAGCTGGGGTGTCCTCGATTTTAGGTGCCATCAAC
+TTTATTACCACAATCATTAACATAAAACCACCAGCCCTATCCCAATATCA
+AACCCCCCTATTCGTTTGATCTGTCCTTATTACGGCAGTACTCCTTCTCC
+TAGCCCTCCCGGTCCTAGCAGCAGGCATTACCATGCTTCTCACAGACCGT
+AACCTGAACACTACTTTCTTCGACCCCGCAGGAGGAGGGGATCCAATCCT
+TTATCAACACCTATTCTGATTCTTCGGACACCCCGAAGTCTATATTCTTA
+TCCTACCAGGCTTCGGTATAATCTCACACATCGTCACATACTACTCAGGT
+AAAAAGGAACCTTTTGGCTACATGGGTATAGTGTGAGCTATAATATCCAT
+TGGCTTTCTAGGCTTCATCGTATGGGCTCACCACATGTTTACAGTAGGGA
+TAGACGTTGACACACGAGCATACTTCACATCAGCTACCATAATCATCGCT
+ATCCCTACTGGTGTAAAAGTATTCAGCTGACTAGCCACCCTGCACGGAGG
+AAATATCAAATGATCTCCAGCTATACTCTGAGCTCTAGGCTTCATCTTCT
+TATTCACAGTAGGAGGTCTAACAGGAATCGTCCTAGCTAACTCATCCCTA
+GATATTGTTCTCCACGATACTTATTATGTAGTAGCACATTTCCATTATGT
+CCTGTCTATAGGAGCAGTCTTCGCCATTATGGGGGGATTTGTACACTGAT
+TCCCTCTATTCTCAGGATACACACTCAACCAAACCTGAGCAAAAATCCAC
+TTTACAATTATATTCGTAGGGGTAAATATAACCTTCTTCCCACAACATTT
+CCTTGGCCTCTCAGGAATGCCACGACGCTATTCTGATTATCCAGACGCAT
+ATACAACATGAAATACCATCTCATCCATAGGATCTTTTATCTCACTTACA
+GCAGTGATACTAATAATTTTCATAATTTGAGAAGCGTTCGCATCCAAACG
+AGAAGTGTCTACAGTAGAATTAACCTCAACTAATCTGGAATGACTACACG
+GATGCCCCCCACCATACCACACATTTGAAGAACCCACCTACGTAAACCTA
+AAAtaagaaaggaaggaatcgaaccccctctaactggtttcaagccaata
+tcataaccactatgtctttctcCATCAATTGAGGTATTAGTAAAAATTAC
+ATGACTTTGTCAAAGTTAAATTATAGGTTAAACCCCTATATACCTCTATG
+GCCTACCCCTTCCAACTAGGATTCCAAGACGCAACATCCCCTATTATAGA
+AGAACTCCTACACTTCCACGACCACACACTAATAATCGTATTCCTAATTA
+GCTCTCTAGTATTATATATTATCTCATCAATACTAACAACTAAATTAACC
+CATACCAGCACCATAGATGCTCAAGAAGTAGAGACAATTTGAACGATTTT
+ACCAGCCATCATCCTTATTCTAATCGCCCTCCCATCCCTACGAATTCTAT
+ATATAATAGATGAAATCAATAATCCGTCCCTCACAGTCAAAACAATAGGC
+CACCAATGATACTGAAGCTACGAGTATACCGATTACGAAGACTTGACCTT
+TGACTCCTACATGATCCCCACATCAGACCTAAAACCAGGAGAATTACGTC
+TTCTAGAAGTCGACAATCGAGTGGTTCTCCCCATAGAAATAACCATCCGA
+ATGCTAATTTCATCCGAAGACGTCCTACACTCATGAGCTGTGCCCTCCCT
+AGGCCTAAAAACAGACGCTATCCCTGGGCGCCTAAATCAGACAACTCTCG
+TGGCCTCTCGACCAGGACTTTACTACGGTCAATGCTCAGAGATCTGCGGA
+TCAAACCACAGCTTTATACCAATTGTCCTTGAACTAGTTCCACTGAAACA
+CTTCGAAGAATGATCTGCATCAATATTATAAAGTCACTAAGAAGCTATTA
+TAGCATTAACCTTTTAAGTTAAAGATTGAGGGTTCAACCCCCTCCCTAGT
+GATATGCCACAGTTGGATACATCAACATGATTTATTAATATCGTCTCAAT
+AATCCTAACTCTATTTATTGTATTTCAACTAAAAATCTCAAAGCACTCCT
+ATCCGACACACCCAGAAGTAAAGACAACCAAAATAACAAAACACTCTGCC
+CCTTGAGAATCAAAATGAACGAAAATCTATTCGCCTCTTTCGCTACCCCA
+ACAATAGTAGGCCTCCCTATTGTAATTCTGATCATCATATTTCCCAGCAT
+CCTATTCCCCTCACCCAACCGACTAATCAACAATCGCCTAATCTCAATTC
+AACAATGGCTAGTCCAACTTACATCAAAACAAATAATAGCTATCCATAAC
+AGCAAAGGACAAACCTGAACTCTTATACTCATATCACTGATCCTATTCAT
+TGGCTCAACAAACTTATTAGGCCTACTACCTCACTCATTTACACCAACAA
+CACAACTATCAATAAACCTAGGCATAGCTATTCCCCTATGGGCAGGGACA
+GTATTCATAGGCTTTCGTCACAAAACAAAAGCAGCCCTAGCCCACTTTCT
+ACCTCAAGGGACGCCCATTTTCCTCATCCCCATACTAGTAATTATCGAGA
+CTATCAGCCTATTTATTCAACCTGTAGCCCTAGCCGTGCGGCTAACCGCT
+AACATTACCGCCGGACACCTCCTAATACACCTCATCGGAGGGGCAACACT
+AGCCCTCATAAGCATCAGCCCCTCAACAGCCCTTATTACGTTTATCATCC
+TAATTCTACTAACTATCCTCGAATTCGCAGTAGCTATAATCCAAGCCTAC
+GTATTCACTCTCCTGGTAAGCCTTTACTTACACGACAACACCTAATGACC
+CACCAAACCCACGCTTACCACATAGTAAACCCCAGCCCATGACCACTTAC
+AGGAGCCCTATCAGCCCTCCTGATAACATCAGGACTAGCCATGTGATTTC
+ACTTTAACTCAACCTTACTTCTAGCTATAGGGCTATTAACTAACATCCTT
+ACCATATATCAATGATGACGAGACATCATCCGAGAAAGCACATTCCAAGG
+CCATCACACATCAATCGTTCAAAAGGGACTCCGATATGGCATAATCCTTT
+TTATTATCTCAGAAGTCTTCTTCTTCTCTGGCTTCTTCTGAGCCTTTTAC
+CACTCAAGCCTAGCCCCCACACCCGAACTAGGCGGCTGCTGACCACCCAC
+AGGTATCCACCCCTTAAACCCCCTAGAAGTCCCCTTACTCAACACCTCAG
+TGCTCCTAGCATCTGGAGTCTCTATCACCTGAGCCCACCATAGCCTAATA
+GAAGGAAACCGTAAAAATATGCTCCAAGGCCTATTCATCACAATTTCACT
+AGGCGTATACTTCACCCTTCTCCAAGCCTCAGAATACTATGAAGCCTCAT
+TTACTATTTCAGATGGAGTATACGGATCAACATTTTTCGTAGCAACAGGG
+TTCCACGGACTACACGTAATTATCGGATCTACCTTCCTCATTGTATGTTT
+CCTACGCCAACTAAAATTCCACTTTACATCCAGCCACCACTTCGGATTCG
+AAGCAGCCGCTTGATACTGACACTTCGTCGACGTAGTCTGACTATTCTTG
+TACGTCTCTATTTATTGATGAGGATCCTATTCTTTTAGTATTGACCAGTA
+CAATTGACTTCCAATCAATCAGCTTCGGTATAACCCGAAAAAGAATAATA
+AACCTCATACTGACACTCCTCACTAACACATTACTAGCCTCGCTACTCGT
+ACTCATCGCATTCTGACTACCACAACTAAACATCTATGCAGAAAAAACCA
+GCCCATATGAATGCGGATTTGACCCTATAGGGTCAGCACGCCTCCCCTTC
+TCAATAAAATTTTTCTTAGTGGCCATTACATTTCTGCTATTCGACTTAGA
+AATTGCCCTCCTATTACCCCTTCCATGAGCATCCCAAACAACTAACCTAA
+ACACTATACTTATCATAGCACTAGTCCTAATCTCTCTTCTAGCCATCAGC
+CTAGCCTACGAATGAACCCAAAAAGGACTAGAATGAACTGAGTATGGTAA
+TTAGTTTAAACCAAAACAAATGATTTCGACTCATTAAACTATGATTAACT
+TCATAATTACCAACATGTCACTAGTCCATATTAATATCTTCCTAGCATTC
+ACAGTATCCCTCGTAGGCCTACTAATGTACCGATCCCACCTAATATCCTC
+ACTCCTATGCCTAGAAGGAATAATACTATCACTATTCGTCATAGCAACCA
+TAATAGTCCTAAACACCCACTTCACACTAGCTAGTATAATACCTATCATC
+TTACTAGTATTTGCTGCCTGCGAACGAGCTCTAGGATTATCCCTACTAGT
+CATAGTCTCCAATACTTATGGAGTAGACCACGTACAAAACCTTAACCTCC
+TCCAATGCTAAAAATTATCATTCCCACAATCATACTTATGCCCCTTACAT
+GACTATCAAAAAAGAATATAATCTGAATCAACACTACAACCTATAGTCTA
+TTAATCAGCCTTATCAGCCTATCCCTCCTAAACCAACCTAGCAACAATAG
+CCTAAACTTCTCACTAATATTCTTCTCCGATCCCCTATCAGCCCCACTTC
+TGGTGTTGACAACATGACTACTGCCACTAATACTCATAGCCAGCCAACAC
+CATCTATCTAAGGAACCACTAATCCGAAAAAAACTCTACATCACCATGCT
+AACCATACTTCAAACTTTCCTAATCATGACTTTTACCGCCACAGAACTAA
+TCTCCTTCTACATCCTATTTGAAGCCACATTAGTTCCAACACTAATTATC
+ATCACCCGCTGAGGCAACCAAACAGAACGCCTGAACGCAGGCCTCTACTT
+CCTATTCTACACACTAATAGGTTCCCTCCCACTCTTAGTTGCACTAATCT
+CTATCCAAAACCTAACAGGCTCACTAAACTTCCTATTAATTCAATACTGA
+AACCAAGCACTACCCGACTCTTGATCCAATATTTTCCTATGACTAGCATG
+TATAATAGCATTCATAGTCAAAATACCGGTATATGGTCTTCACCTCTGAC
+TCCCAAAAGCCCATGTAGAAGCCCCAATTGCCGGATCCATAGTGCTAGCA
+GCCATTCTACTAAAACTAGGAGGCTACGGAATACTACGAATTACAACAAT
+ACTAAACCCCCAAACTAGCTTTATAGCCTACCCCTTCCTCATACTATCCC
+TGTGAGGAATAATCATAACTAGTTCCATCTGCTTGCGACAAACCGATCTA
+AAATCACTTATTGCATACTCCTCTGTCAGCCACATAGCCCTAGTAATCGT
+AGCCGTCCTCATCCAAACACCATGAAGTTATATAGGAGCTACAGCCCTAA
+TAATCGCTCACGGCCTTACATCATCAATACTATTCTGCCTGGCAAACTCA
+AATTACGAACGTACCCATAGCCGAACTATAATCCTAGCCCGCGGGCTTCA
+AACACTTCTTCCCCTTATAGCAGCCTGATGACTATTAGCCAGCCTAACCA
+ACCTGGCCCTCCCTCCCAGCATTAACCTAATTGGAGAGCTATTCGTAGTA
+ATATCATCATTCTCATGATCAAATATTACCATTATCCTAATAGGAGCCAA
+TATCACCATCACCGCCCTCTACTCCCTATACATACTAATCACAACACAAC
+GAGGGAAATACACACACCATATCAACAGCATTAAACCTTCATTTACACGA
+GAAAACGCACTCATGGCCCTCCACATGACTCCCCTACTACTCCTATCACT
+TAACCCTAAAATTATCCTAGGCTTTACGTACTGTAAATATAGTTTAACAA
+AAACACTAGATTGTGGATCTAGAAACAGAAACTTAATATTTCTTATTTAC
+CGAGAAAGTATGCAAGAACTGCTAATTCATGCCCCCATGTCCAACAAACA
+TGGCTCTCTCAAACTTTTAAAGGATAGGAGCTATCCGTTGGTCTTAGGAA
+CCAAAAAATTGGTGCAACTCCAAATAAAAGTAATCAACATGTTCTCCTCC
+CTCATACTAGTTTCACTATTAGTACTAACCCTCCCAATCATATTATCAAT
+CTTCAATACCTACAAAAACAGCACGTTCCCGCATCATGTAAAAAACACTA
+TCTCATATGCCTTCATTACTAGCCTAATTCCCACTATAATATTTATTCAC
+TCTGGACAAGAAACAATTATCTCAAACTGACACTGAATAACCATACAAAC
+CCTCAAACTATCCCTAAGCTTCAAACTAGATTACTTCTCAATAATTTTCG
+TACCAGTAGCCCTATTCGTAACATGATCTATTATGGAATTCTCCCTATGA
+TACATGCACTCAGATCCTTACATTACTCGATTTTTTAAATACTTACTTAC
+ATTCCTCATCACTATAATAATTCTAGTCACAGCTAACAACCTTTTCCAAC
+TGTTCATCGGATGGGAGGGAGTAGGCATCATGTCATTCTTACTAATCGGA
+TGATGATACGGCCGAACAGATGCCAACACCGCGGCCCTTCAAGCAATCCT
+TTATAACCGCATCGGGGATATCGGCTTCATCATGGCCATAGCCTGATTCC
+TATTCAACACCAACACATGAGACCTCCAACAAATCTTCATACTCGACCCC
+AACCTTACCAACCTCCCGCTCCTAGGCCTCCTCCTAGCCGCAACTGGCAA
+ATCCGCTCAATTTGGACTCCACCCATGACTTCCTTCAGCCATAGAGGGCC
+CTACACCAGTCTCAGCCCTACTCCACTCCAGCACAATAGTTGTAGCAGGC
+GTCTTCCTGCTAATCCGCTTCCATCCACTAATAGAAAACAACAAAACAAT
+CCAGTCACTTACCCTATGCCTAGGAGCCATCACCACACTATTCACAGCAA
+TCTGCGCACTCACTCAAAACGATATCAAAAAAATCATTGCTTTCTCCACC
+TCCAGCCAACTAGGCCTGATAATCGTAACCATCGGTATCAATCAACCCTA
+CCTAGCATTCCTCCACATTTGCACTCACGCATTCTTCAAAGCTATACTAT
+TTATATGTTCCGGATCCATTATCCACAGCCTAAATGACGAGCAAGATATC
+CGAAAAATAGGCGGACTATTTAATGCAATACCCTTCACCACCACATCTCT
+AATTATTGGCAGCCTTGCACTCACCGGAATTCCTTTCCTCACAGGCTTCT
+ACTCCAAAGACCTCATCATCGAAACCGCCAACACATCGTACACCAACGCC
+TGAGCCCTACTAATAACTCTCATTGCCACATCCCTCACAGCTGTCTACAG
+TACCCGAATCATCTTCTTTGCACTCCTAGGGCAACCCCGCTTCCTCCCTC
+TGACCTCAATCAACGAAAATAACCCCTTTCTAATTAACTCCATCAAACGC
+CTCTTAATTGGCAGCATTTTTGCCGGATTCTTCATCTCCAACAATATCTA
+CCCCACAACCGTCCCAGAAATAACCATACCTACTTACATAAAACTCACCG
+CCCTCGCAGTAACCATCCTAGGATTTACACTAGCCCTAGAACTAAGCTTG
+ATAACCCATAACTTAAAACTAGAACACTCCACCAACGTATTCAAATTCTC
+CAACCTCCTAGGATACTACCCAACAATTATACACCGACTCCCACCGCTCG
+CTAACCTATCAATAAGCCAAAAATCAGCATCACTTCTACTAGACTCAATC
+TGACTAGAAAACATCCTGCCAAAATCTATCTCCCAGTTCCAAATAAAAAC
+CTCGATCCTAATTTCCACCCAAAAAGGACAAATCAAATTATATTTCCTCT
+CATTCCTCATCACCCTTACCCTAAGCATACTACTTTTTAATCTCCACGAG
+TAACCTCTAAAATTACCAAGACCCCAACAAGCAACGATCAACCAGTCACA
+ATCACAACCCAAGCCCCATAACTATACAATGCAGCAGCCCCTATAATTTC
+CTCACTAAACGCCCCAGAATCTCCAGTATCATAAATAGCTCAAGCCCCCA
+CACCACTAAACTTAAACACTACCCCCACTTCCTCACTCTTCAGAACATAT
+AAAACCAACATAACCTCCATCAACAACCCTAAAAGAAATACCCCCATAAC
+AGTCGTATTAGACACCCATACCTCAGGATACTGCTCAGTAGCCATAGCCG
+TTGTATAACCAAAAACAACCAACATTCCTCCCAAATAAATCAAAAACACC
+ATCAACCCCAAAAAGGACCCTCCAAAATTCATAATAATACCACAACCTAC
+CCCTCCACTTACAATCAGCACTAAACCCCCATAAATAGGTGAAGGTTTTG
+AAGAAAACCCCACAAAACTAACAACAAAAATAACACTCAAAATAAACACA
+ATATATGTCATCATTATTCCCACGTGGAATCTAACCACGACCAATGACAT
+GAAAAATCATCGTTGTATTTCAACTATAAGAACACCAATGACAAACATCC
+GGAAATCTCACCCACTAATTAAAATCATCAATCACTCTTTTATTGACCTA
+CCAGCCCCCTCAAACATTTCATCATGATGAAACTTCGGCTCCCTCCTAGG
+AATCTGCCTAATCCTCCAAATCTTAACAGGCCTATTCCTAGCCATACACT
+ACACATCAGACACGACAACTGCCTTCTCATCCGTCACTCACATCTGCCGA
+GACGTTAACTACGGATGAATTATTCGCTACCTCCATGCCAACGGAGCATC
+AATATTTTTTATCTGCCTCTTCATTCACGTAGGACGCGGCCTCTACTACG
+GCTCTTACACATTCCTAGAGACATGAAACATTGGAATCATCCTACTTTTC
+ACAGTTATAGCTACAGCATTCATGGGCTATGTCCTACCATGAGGCCAAAT
+ATCCTTTTGAGGAGCAACAGTCATCACGAACCTCCTATCAGCAATTCCCT
+ACATCGGTACTACCCTCGTCGAGTGAATCTGAGGTGGATTCTCAGTAGAC
+AAAGCCACCCTTACCCGATTTTTTGCTTTCCACTTCATCCTACCCTTCAT
+CATCACAGCCCTGGTAGTCGTACATTTACTATTTCTTCACGAAACAGGAT
+CTAATAACCCCTCAGGAATCCCATCCGATATGGACAAAATCCCATTCCAC
+CCATATTATACAATTAAAGACATCCTAGGACTCCTCCTCCTGATCTTGCT
+CCTACTAACTCTAGTATTATTCTCCCCCGACCTCCTAGGAGACCCAGACA
+ACTACACCCCAGCTAACCCTCTCAGCACTCCCCCTCATATTAAACCAGAA
+TGGTACTTCCTGTTTGCCTACGCCATCCTACGCTCCATTCCCAACAAACT
+AGGCGGCGTATTAGCCCTAATCCTCTCCATCCTGATCCTAGCACTCATCC
+CCACCCTCCACATATCAAAACAACGAAGCATAATATTCCGGCCTCTCAGC
+CAATGCGTATTCTGACTCTTAGTGGCAGACTTACTGACACTAACATGAAT
+CGGCGGACAGCCAGTGGAACACCCATACGTAATTATCGGCCAACTGGCCT
+CAATCCTCTACTTCTCCCTAATTCTCATTTTTATACCACTCGCAAGCACC
+ATCGAAAACAATCTTCTAAAATGAAGAGTCCCTGTAGTATATCGCACATT
+ACCCTGGTCTTGTAAACCAGAAAAGGGGGAAAACGTTTCCTCCCAAGGAC
+TATCAAGGAAGAAGCTCTAGCTCCACCATCAACACCCAAAGCTGAAATTC
+TACTTAAACTATTCCTTGATTTCTTCCCCTAAACGACAACAATTTACCCT
+CATGTGCTATGTCAGTATCAGATTATACCCCCACATAACACCATACCCAC
+CTGACATGCAATATCTTATGAATGGCCTATGTACGTCGTGCATTAAATTG
+TCTGCCCCATGAATAATAAGCATGTACATAATATCATTTATCTTACATAA
+GTACATTATATTATTGATCGTGCATACCCCATCCAAGTCAAATCATTTCC
+AGTCAACACGCATATCACAGCCCATGTTCCACGAGCTTAATCACCAAGCC
+GCGGGAAATCAGCAACCCTCCCAACTACGTGTCCCAATCCTCGCTCCGGG
+CCCATCCAAACGTGGGGGTTTCTACAATGAAACTATACCTGGCATCTGGT
+TCTTTCTTCAGGGCCATTCCCACCCAACCTCGCCCATTCTTTCCCCTTAA
+ATAAGACATCTCGATGGACTAATGACTAATCAGCCCATGCTCACACATAA
+CTGTGATTTCATGCATTTGGTATCTTTTTATATTTGGGGATGCTATGACT
+CAGCTATGGCCGTCAAAGGCCTCGACGCAGTCAATTAAATTGAAGCTGGA
+CTTAAATTGAACGTTATTCCTCCGCATCAGCAACCATAAGGTGTTATTCA
+GTCCATGGTAGCGGGACATAGGAAACAAgtgcacctgtgcacctgtgcac
+ctgtgcacctgtgcacctgtgcacctgtgcacctgtgcacctgtgcacct
+gtgcacctgtgcacctgtgcacctgtgcacctgtgcacctgtgcacctgt
+gcacctgtgcacctgtgcacctgtgcacctgtgcacctgtgcacctgtgc
+acctgtgcacctgtgcacctgtgcacctgtgcacctgtgcacctgtgcac
+ctgtgcacctACCCGCGCAGTAAGCAAGTAATATAGCTTTCTTAATCAAA
+CCCCCCCTACCCCCCATTAAACTCCACATATGTACATTCAACACAATCTT
+GCCAAACCCCAAAAACAAGACTAAACAATGCACAATACTTCATGAAGCTT
+AACCCTCGCATGCCAACCATAATAACTCAACACACCTAACAATCTTAACA
+GAACTTTCCCCCCGCCATTAATACCAACATGCTACTTTAATCAATAAAAT
+TTCCATAGACAGGCATCCCCCTAGATCTAATTTTCTAAATCTGTCAACCC
+TTCTTCCCCC
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/hg19chrX_midpart.fasta	Fri Sep 28 13:53:48 2012 -0400
@@ -0,0 +1,751 @@
+>chrX_part
+TCTGTTAGACTCACTCAGGACTGTATGAGCATCACCTGTGCTGCACTGTG
+ACTTTACAGATATTAACGAAGAATCCTCAAGGATCTGTGTTTCGGAGGCA
+ATCTGGTGACCAGCAGCATTCTCAGCATTCAAATGATGACCCTCAAAATA
+GGCAGTAGCATTTTTATCTGCTCTGTCATTGGCTACAAAAGACGGCACCA
+CTGGTACTGATCTTGGTAGCTGATATTCAGGAGAAAGGCTGACCAAGGGT
+GTATATATGCTGGTGTACTGGGGCAAACCTGGTAACACATTTATGTATGC
+TGGCGATGTCCGGGTGTTATCAAATCTCTGGAAAGGAAGATACGTACAGT
+ATCCTGTGACCAAATGGGATTGAGCCCAATAAGTTGGTTTCACATCCTCA
+AGAACCGGTTTGGGAGAATTAGAGGAGACTCGCTTGTAATTTGCATCCTC
+AGAGCCTGGTTTGGGAGAATTAGAAGAGAACCCTTTGGGTTTCCCATCCT
+CAGAAACTTGTCTAGAAGAATTATCGGATACTGGTTTGGCCTTCACATCT
+TCACAAGCTGGCTTGGGAGAATTTGCAGACAAAGGTTTGGGTTTCACATC
+TTCAGAAGCTGGTGCTGAAGATGAACCTGATACTGGTTTAGACTTTACAT
+CTGGTTTAAATTCCCTAGCAGCTGAATTAAGTGGTAGTTTAACTTGTAAA
+TACTCTCCTGCTTTTGAAATGTCTTCTACTTTTGTTTTAATGTTTTTCTT
+CTTTCTTTTTTTCTTGAGCCGTGATGCAACTTTCTTCAATGCAATACAGT
+TGTCAATCACAACAAAACGGGGACATCCCAAGAGAAAAGATTTTAAACCT
+CCTGCTTTTTCTAGTATTGGTCGAGTTTCTTCTGGGAAAAACTCATATTC
+TTCAGAGAACATCTTGTGACTCATGTCCAAGGGACCATGTTCCTCCAACA
+ACTGAGAGAAGTAATCATATAGAGTTGAACATTTTTGTTTTGGGTTCATG
+TCCCATAGCTTCTTATTGCGGACAACATATTCATTACTGTGTTGGTCATA
+GAGAGCTTCAAATTCTTCTACGTCTTGCCGAAGATGGTCAGGCACTGCAA
+ATGGGCCTGCAGTATCTGAATTTTGATTGCTATGGTCTTCACTTGAAGTG
+ATGATCTCATTATTTGGAGTTACTGAAGTTGTTCCAGACCCAACTAACAT
+AGGCTTTGAATCCTTTGGTTTCTTTTTCTTGCCTTTGTTTTTCACCTTGG
+TAGAACTAAACGGTGCTTCGCCACTGTCTTGTTTCCTTAACACAGTACAG
+CGGCTGTCCATTATATCAAAGAATTCATCTAAAGCACTATGTAATGCTGG
+GAACTTGTCTCTGTGTTCTTCTAGCAGCCATATTAAACAGCGGGCTTCCT
+TCGATGATGTTGGCTCAAAGAAATAATCAAGTTGCTTTCCTTCTATAGAG
+TCTAGTTTGTGACCATATTTCTCATTCCAGAGGAAAGTCATGATGCTAAA
+ATCAAGCTGTTTAAGAGATGCTTCATACCGAGAAAAGAAAGGTCCTGTGG
+CATCTAAGCCAAAGCTATTAAGTTTTCGGATCCAGGCGGCTAATTTGGGC
+TCCACTTCTTTAAGCTCACTCAAAACATGCAGAAATATTCTTGTCTTTAC
+TCTGTTCTTTTCTTGAATCAAGTGACGAATAACATAGTCCACTGCTTCAT
+TTAGAAAATTTCTGCTTGAAAAACAGGTTGTATAGTCCTCTGTGCTCAAA
+ACTTTCCAAGAAAGTAATTCTTTGAGAAGCGTGGCTGTATTCCATATGCC
+GGATTTAATCTTGTCAGCATACTGCTTTATACACTGTAGAATTCTGTCAT
+CAAGGAACTGACAATGCTGAACATTGTCTACAGTTTCTTTCTGCTCTTCG
+TTTTTGGGTGGATTACTTTCTCTTAAGTCCTCCTCCATTCTTTCTTGTGC
+TAATTTTTTTGCTTCTTTTTTTTGGATCTTTCTCTTCAATTTTTTGTCTT
+CTTTCAGTCTTAGTTTCTCTAGGCTAGAACATTTCTGTTTCAGAATAGGT
+CTTGGAGGAACCTTTTCTTTTATGACCTTGTGTTCAAATTCACATTTAAC
+TTGACCACCACTGCTGAAGATGATAATCTTAGAAATGACACCTTCACAGT
+CAGGGGTAAGACATATTCCTTGTAGAAAATCCTTGTCAATTTTATCATTA
+AAGGTTGTGGTTTTTAACTTCTTCCAGCAATTCATGTGAAATTCTATTTT
+ACAGTACTGGCAACAGCTGATGCGTATAAAACCCTTAAAGTCTGGATCAG
+TTATGTATATCTGGATCTTAGAATATCCACAGCACTTCTGATAGCAACAA
+ATGGCATCTGGCACTGGAGGGAACTTGCATTCTTCAACAAATTTCTCTAA
+CAGCATCTTTATTTTTTCTGGCTGAGACTCTTCAATAATCACATTACTTG
+TGGGCCAAGTTAACACTCCAGGAAGACGATAAATCAAGGTTCTTGCTTTC
+TCAAAGTGATTGAGAGCTTCTAGAAATCTGTTTTTTTTCAAATATACTTT
+TCCAATTCCACAGTAGGCCAAGCAATCAAGTCCCTCATTGTGGTAGTGTT
+CAATAATCCTCTTAAACTGGTTTTCAGCTTCAGATAGTTCTTCAGGCTGT
+CCTATTCCAAGGAGTGAAATGGCAAGTCCATAGACAACCAAGACATAGTT
+AATCATGGCCAGATTCAATTGCTTTATTTTTTGAGGATCTAAACCATTCA
+GCAACTCTGTAAAGGCATGTGCGGCACTGCGGCAACGCTGCTCCAATAAG
+GCTGTATAGCCATCTTGAATTAAGCTTCTCAGCATTGTCATTATATTAGC
+AAAATCCTGGTGTGCACCTCTGGAAGATTTAGAAAACTGTTTCTCCAAGA
+TGTTCTTCAAATCTGCTGGTAAAGTCAATTGTGAACTAGAACTGAACTTT
+TCTGATTCATTGTTTCGAGATTTTTGTTTTCCTTTATGTTTCGGAGGCTG
+ACTTGATGGTGGTGAAAATTCAGGATGACAGTCACAATCATCTACCATCA
+ATGCCTCATCCATCACCTTTAGATTCTGATTACCACCGTTAGCCATTTCG
+TGATTAATTTTTCTGAAATCTCTTTCCTTCTCCACAAAGTTAAGTGAAGT
+ACTAAATACAGGTGCTGATAAACTCCTAGGTGTGTAGGCCCTGTTTTCAT
+AAAAGGCTTTAATTGGATTCTTATTTGCTGTTCGACCTTGTAGGTCTTCT
+ATTTGTTTTTGTAACTTTACATGCTGCTGAATTAGATCCTTGATTCCCTC
+AGGGTCATTTTTACAGAGTTTTTGAGCTGTTATGTTTGCTTGCAGGGCCC
+AGTTATATTCCCCCAGCATAGAAAGAGCATCACAATAACGATAATGACCC
+TTTGGCCAAGTGTTCTTCAGAATAGTGGCTCTCTTTCCATCACCAAGTGC
+ATTTCTAAACTGTCCAGTACGAAGAAAACAAAGAGCTCGGTTACCATAAA
+GAAGGTGGTTTTCAGGTCTATATTCAATGGCTCTGGTGTAATAGATAATA
+GCTATATCAAATCTTTCTTTGGAAAACTCTTCATTTCCTTTCATTTTCAT
+TAGTTCTCCTTGCTCTATACAATCCATACAACTTTGGGTTTTAAGTTCTT
+CAAGCAAATTGCAGTCTTCCATTACAATTTTAGTTATGTGGTACTTGTAT
+TCAGTAAAGAAAATACTTAACATAGGCCAACAATTGTCAATTGATCCTAA
+TTTAGTTAGAATTGTTACATCGCCTGCATATTTTATCCAATTCAGAGCTT
+CTTCCATTGCCAAGATTTTATTTTCTATTTTATAACCAATTCTCAATAAG
+CCTCCAATAAGGAGTGAATCATTAGCAGCTTTCTTTGCCAAATCCACAAT
+ATCTTCCATCAACTCAAGATGTTGTAATCTCTTCAAATTTATCTCGGAAG
+CACGTGAATTGTTGGCGTCCACACAGGGATGCAATCGTGATATTACAGAA
+CTGTTTTGATGTTGAAACAGAAGTGGCCAGAAGATGTTTATTTTAATGGC
+ATCACAATAATCTTGCAGGACAGAAATTGGTTTACTACACCATATACTGC
+AGATGTCAAATTCTAAATTCCTCTCACTTTGGACATAATCTTTATATTGC
+TTACCCACCCCATCACAGTAAAGCTGAGTCACACGAACATAATCATCGGT
+CATAAATTCAGCAGCAAAGACACAATCGTCCACGTAAGGGCAATCTTCTA
+ACAAGGCATAATCCGCCATAGTGAAATCTCCCTCAGCAAAATTGTCCGTG
+ATGCACAAGTCACGCACACACGGAGGGGTGTGGAAGGCCCCGCTCCCCTG
+GCATCTCGGCTGCAGCGGGACCAGGTAACACATCCGGGAGCCCGGCCGCG
+CGCCGGGTGTGCACTCACCCGGGCCTGCCGCCCGCGAGCCTGGGACGCAG
+GCATccgccgccgccgccgccgccaccgccgccgccgccgcggccgccgc
+cgcagcagccgccgctgccgccgccgccgccgctgctgccgctgccgctt
+ccgccgccgccgccgccacctccgGCCCTCTACGTCAGCGGACGGTGGGA
+GGGAGCGAGTGCTTTTAACTGTTTCGGTGTCAATACTGACCACAGTCATT
+ATTTTCTCCGGCTGTACTTTAAAGTCTTAATGGTTGAAGCCATGTATCCT
+TTGCCCACAGACCAGAGGAAGGGGAACCAGGTTCTTTCAGGAAAGTGCAT
+GGGGGATGCCTCTCTCTCATCATGTCCCCTGACTCCCAGGTGTAATCATA
+ATCTCCTCATGGAAGTGCCAGGCACATAGAGAGTGCTCTTCCTGCTGCCT
+CCACTCCTGCTAGACAGAGCCCTGTCAAGGTCATCCTAAGGGCTGGGATC
+CACTAACAGCTTTGACCTTAAAGCAGAGTCTGATATTGGGGATGTCATTT
+CTTCACTCTGATGTACTAATTTTTTTTTTTATCTATACGCTGATGAGAGG
+CTGCTCAGACACCTGCAAATTAGCATCACACTCCCCTAGGTTCTCTAGCA
+AGATATTCTGGGAGGAAAACCTCTGAATCTTATTTCTACCTGTTGCTCAA
+GGAAGGGACTGTTTCCAAAGAAAATCACAGTCGTATACAGGGGAGCTTTT
+CTGTGTCCCTTTTTCTCCTTTGTTCCTTTTCCCCTCTCTCTCTTTTAATG
+GCACCCATTTCTTCCCATCACTTAGAATCACTGAGAATCTTTTTTTACCC
+TGGCTTATAAATTGTGTAGAATTCCTGTAAAGTATGGTGCTCCTTTGTCT
+GTTTCCATTGTCTCTGACCTAATTTTTGACTGACTGGCCATTTACCTGAT
+CCACTTtaaaagccaggagaactgtgttctcatttcagaagaaactgtgt
+taccctggccagttttcttcccttttctgggattcatttcatctgtaaaa
+tggggggCGGGGGTTGACCATCCTGGGTTCTATCTGGAGGTCGATGGGAG
+TCAGagagagagctctgacatggtgatgcagggccttgaactccactcac
+agctctgctgctaacctagcatgtgatttagttctagtccctttccactt
+ctgagcctcagttccccatctAAGCAGCCATGACTGACAAGGGAGAAGTC
+TTAGACTCCCACAAATGAGGACCTTGATCCCCTAACATGACTGTGTGTTC
+ATAAGACCCGTATCCTCTGATCTTGAGCAGATAGAGCCTTTTCTTATCCT
+CTGGATTGCTTCTTGGAAATGGCTGTAGCGAAAGCCTCTTCTTTTGTGCT
+TGATACTTTATTTTCCCAGGTAAGCTCCCTCTACCTTTGTCCTGGGGCAT
+GTATTTATGGATATTTTAGTTAGAAAAAGCTATCAATTAGTGTAATTAGC
+TTATTGTCACCTTCAATCTTGACCCTCTCCCTGCACTGTCCCCTACCCAC
+CTCAGGTTCTCTCTTATTTTAACTTAGTGAGCAGAGCTCCTGGCTGCATC
+ACCATAGCAACCAGCAGCTAGGACCTATTAAGCCATGATGAGTCATTAGA
+CATCTAAGCTGATTATAGAGTCCAGAATGTTAACTGCAGAAGAGATGCTG
+AAAGAAGGAAAATGAGGCAGATCTTAACCTACAAACAAGTAGACAACAGA
+GTAGCTGAGTGCTTCAAACTATCCCCGACCTGGATGCCATGGGCGCTATG
+GGCCTGGGTGTCAACACCTTGGCATGTACCCTCAGCCACCAGACCAGAGG
+GAGGGGCACCAGGCCCATTCTCTTCCCAGGGAAGTAATTCTGGACACCTT
+CCTGCCAACATGCTCCAAGTAGATGGATTTGAGTCTGGATTTTTCAATGG
+GCAGTACCAATTACTGAGTTCATCCTGAGTCCTACTCCTAATCTAGTGAC
+ACATTTCCTTATCTTTCAACTTTCCATAGAAGTTTCTTAAATGAAAAAGG
+GCATTTTTTTTTTTACTTGTTTGAAACTCTCTTTTCCCAGTCAGTTCCCC
+TGCTGCCTTGGCCTGTATTTGTGGCCTGTTAAATTTAAAAGTCTATCAGT
+TAGTCTAATTAGGATATTCAAATTTTAATTATTTTCCCTTCTCCACATGG
+GCAGCCACCCACCCTTCTTTTATTCTCTCTTTTTATTTCATTTAGGGAAA
+AAAGCTCTTGGCAGGATTGCTATAGAAACCAGCCACCAGGCAGACTAGGC
+CATTGTGCTTCTGGACACTGATACTCAAAGCTGATTATGGGTCTGGAAGC
+TTGCATGGCTGAGCAAGACTGATGGAGTTAAGACAAAGAGGGTCTCAGCT
+ACAGAGAAGGGGAAAATAAGCACCTCAGAACTTTAGACAAACCTCAGCCC
+TACCTTTATCTTTGCCCCTGTATGCTTCATGGAAGAAAAAAGTTAGAATG
+AGGAAGGCTGTCCCCTATTAAAGATGAATGTCTGGGTTGACATCAGAACT
+TGTGCCCTTAGGCTAACCCTGCCATGACGACAAACCCACACCTGTGAACA
+TGTCATTTTCACTGAGTATCCCTAGTTCCTATTAAATTACCTGGCATATA
+CTTAAGGTTCTCATAGTGCTTGGTGCTCAGCAATTCTGTAAGACAGAGCA
+CTACTAGTGAGAGCACACTGAGACTACCTTGGAACATGAGCAAGTGAAGA
+CTTCCTAACACACTGGATTTTTCTGGGAAATGACACTAATGAAAGCCTCT
+GCTATGTGCTCTAAGGCTCCCTGTTTGCAATTTACCTCCCCTGCCTTCTG
+GCAGTGGTGGTGTAAATGCCTGGTGGAGGGGCTTTGAAAGCTGTTAGTCA
+CTGAAGTACCTAAGTGTATTAGGCTATTATTGCCTTCAAGGATTTTCCCC
+TGGTCCCACAATGCACCCCTGTCTACATTAACAGGCTCCCACTCATTTAC
+ACTGGGAGAGCAGTGCTCCTGGACACATTGCCATAGCAACCAGAAGCCAG
+ACAGAGTAGGAGGGTGAGCCAGACATTTGACAGCAAAGGTTAGTGGAGTA
+TCTGTTGGAGAGGGGCTGACTCTTAGGAGGAAAATACCTTATCTCTCAGC
+TGCAGAGAAATAGGCCACTAGGCCCCTCAGTGTTCCAACACCATCCCCTC
+CCCATCCTCCATCCCCATGCCTCCAGATGAGGAGTAGTCAGAATGAGTTT
+TGTTTTATCTGGAGGCCAAGGCCTGTGTTTTATCAGAATAGGTATCCTTT
+GCCCCGAAGCCGGTCAAGGGAACCAGGTACCACATACTTCCTCCTACGCC
+ACCTTGTTACCAAACTAACACCCATGAGTGAACATATGCTCCAAATGTGt
+gttcccatgactgcatctcctgtgcctagaatagtgtcaagtatatggca
+gTGCAACTTTctgcacttcccctgtctactcactccattgcagttcacac
+cttatcatttgcagaattccatttactactggaatacccactgtattagt
+ctgtcctcatgctgctaataaagacatacccgagactggacaatttacaa
+cagaaagaggtttaatggacttacagtttcttgtggctggggaggcctca
+caatcacagctgaagatgaaaggcacatctcacatagtggcagacaagag
+aagagagcttgtgcagggaaacttctctttttaaaaccatcagatcttgt
+gagacttattcattatcatgaagaacagcacaggaaagaactgcccccat
+gattcaattacctcctaacgggtccctcccacaacatgtgggaattcaag
+atgagatttgggtaaggacacagccaaaccatatcagccacagtctcaac
+tgatgacactgagaacatgaaagtaaaggaatagcctttaaaaacttctc
+acttccatgcatctgcaacttgatactctgctttccctttcatcactatg
+gataaactctctacattcctatgaaaacccatacctaccgttggccacta
+gattacaccccttcttgactattcaatgcatggtcccagcaatgctgtct
+gtgctctttgccacatcatcaatttacctttatgtactggatgattccca
+tcagtacacaaagattccacaagtctcccttgcaacaacaacaacaaaac
+caacaagaaagaaacaaaacaccctaccttaactgtacaacccactccac
+ctactgcatcatctctgtacaccaaacttcctcaaaaatcattatgtggt
+cttgatttgttcacttatgtactctcatttttttcttgaacccaccctag
+tcaagcttttatcccccactccatggaaatagctcaagatccccaaataa
+cctgcatattgttaaacctagtgattatttctcaggctggtcttacttga
+ctgaaaagtagaatttgacacaattgatcacttcctcctccttgtaatac
+tttcctcacttaatttacaggacatttctgtctcttggttgtgcttctgc
+ttcagtgtctgccatttttcagagtcatggctagttactcctcactgctt
+tgacctcttcacCCTGCTAGAAGCTATTAGTCAAAACATAAGTTTTTATT
+TAGCCAATTGAAGGTGTGTAACATAGGACTGTGGTTGTCAGAATGGAAAC
+CACTTGGGCCTTCATATAGGTGGCTGAAGAAATTTATCCAAGCAAGAGAT
+AGCATCAGGTCCTGGGCTAACAGCTTTCTGGTTGGGAAAGACCCCCAACA
+CCTGCCTTCATTCAGTGAGACAATTGTATGACTCACCTGCAGTAATGTGC
+AGGTTAAAGGTAACGAGTTGAACTTGTAGCTTGCCCCTCTCTCACTACAT
+AAACTCCTTTCTTCTCTCTGGAAGGAGTTCAGTTTCCAGCAGAGGTGATG
+ACAGATTAACAGATTCCAGTTTAAAAAGTGCTATAACCCTGAAGGGGGTG
+GGGTATGTTGGTAGATAAGAGAAGTTAGATCTTTAATAAATCCCACAAAT
+TATTCTGGGCAATTTATTTACTGAGAATTTTTAACTCTCAAGTGTTAAGA
+TTTTCCTAGATAATCATTTGTTTAATTCAGGTTTTCAAAAGCATTTACTT
+CAGACTCCTTTTATTCTCTTAATTTCTTTTCTATTGCTGTTTTAAAAACA
+AACAAAAAAAATACTTAGTGACTCAATTAAAAAATATTATTGGTGAGGGG
+ATGAAGCACAGTTTCAAAGAGTTACAAATTAAAAATATTAATTGGCATCT
+GAATTGCAAGAATCCATTTACCTCCACTCTCTAAGCTCTAATGATGTTTG
+TGTCCCCAAGTCAAGTTCCAAAGTAACCATTATTCCCAATAGGTAAAATT
+CCTCTGACCTCTGGTCCTGTTGAACCTTAAGGCTTACCATAAAATTGCTT
+CAAATTGCAAGAAATGAGCGTGGAATTCTTCCCTCCCCCTAGCCAAGGCC
+TGTTCTAGTTACAACCAACAGTCGATAAATCCCAGTGCTTCTCCCATAGT
+CCCAACCCTCTCGTGCACTCTCACTACCTCATTGAGGGCTTTGGAGTTTC
+CAGGATACAGCATACGAGTCTTACCAAAATCCCAGATGGGGCACCTCTCA
+GTCATAACTTAAGAAGATGCTCTCAGATCTTGACTCCCAGATTCAGCCCA
+GACTCACTATGATCTTGAAGTGCCTTGTGAACTTTAACAAATGGCCCATC
+CTGTCCCCAGTCTCTGGTGCATAAACTGTTTCCCACATCAATCACGAGCA
+CAGGTTCTATGCCATCCAACACTGCATTGTTCCTTGACATGTTTTTTTTT
+TTTGTTTGTGCAGTCAACACATAATTGATGAGGCACATTCTACATGACAG
+GCACTACACAAGAGACTGAGGGGTGAACTGATTAGCACCCTGCCCCTTTG
+GTGACCTGTTAAGATATAATAATAATGGTCATACTGAGCTCTGAGAGTAA
+AATAAAAACAGCAGTACACTCAGGAGGGGCCAAAAATATTCCATTCCTTC
+CTTCCCCATCAACTTTTTATTTGTGGATCCTCAAGGCCGAATGATCCTGG
+AAGACCCCTGTCTGCATAAAGACATTTATTTGTGGCCTTTCATTTCAAGT
+AATTGAGTTTTGATATCTATACCAAACAAAGAAACGTCCAGACCCCCATC
+ACATTATAGCTTCCCCTAAACAGTTGTTTGCAACAAACAGGTTCAGTAAG
+TGACCAGTTATAAGATTAATATATAAGAAAATAGCTTTCCAGTGACTAAA
+ATCCAGCTGGAAGGGCAAGGAAGTTTTACTTCATTACTGCATCTCCTAAG
+AAGCTTACTAAGTCTCTGTTTCCCAAATATGTGAAAAGCAATAAGTTGCT
+TCTAGGGTAAGAAGCAATAATGTATGTGTATGGAATGAACTGGCATTCAC
+CTGAAGCTCAATAAAAGTTATTCCCTTCCCTTTGGAAAAAAAAAACCCAG
+TTCTCAAGGTGGGACTACAGAAAATGTTTGCTTTTCATCAATTCTTTAGG
+TAATTTTGAGCTTCATCTTGGGGCTGAGAATTTGGGTCAGGACCTATTGA
+GAATAGCCACCACTCACCTCAAAAGAGATCACATCAGGAGGTTCATAATC
+TGTTTCTATCTTTCAAGTATTCTTATTGCTTTTTCACATTTCTCTTTCAG
+TACCTTACAATGGAAATATGGGCATTTCATAAAACAGAACGAGATAGTCA
+TGTGCACAGCATTATCAGGGCCAAGCTTTGGAAAAATGGACTCTGATATT
+CAGGACAATATCCTTAGCAAAGGGCAATTTTGATTCTCAAACGCGGACCA
+GCAAAGTGCTTTGCAGTCTAATGATCCAAGCCTACCTCCAGTTTTTCTTT
+TGACATCTGAAGCCTTGAACTGATTCCGGTTGCAACCACTTTACAATGAA
+GGTTTTAAAATCCCTAACACACAATTCTATCAACCCTTACTCTTCAATCA
+GTCAAGTACCCTACGTTTCCAATCCTAGAAATTAGGCTGCCTCCATTCCC
+TGATATATAGAATGCTTTCAAATTTATAATCCAGTGCCAAGTCTTGCTTC
+CATCCCTGACTTTTTTACTTTCTTAAGAATCAGAAACCATGAAGAATTCT
+GGGCCCCTTGCTGATCAGCACAGTGCTATGAGAATTTCACAAGCCAAGGA
+CAGTACAGATCCAGAAATCCTGTTTTATAAACTGTGTCAAGATTCAAAGT
+CCATTTTCttttttattattattatactttaagttctagggtacatatgc
+acaacgtgcaggtttgttacatatgtatacatgcgcccttttggtatgct
+gcacccattaactcatcatttactctaggtatatctcctaatgctacacc
+tcccccctccccccaccccacggcaggcccccgtgtgtgatgttccccat
+gctgtgtccaagtgttctcattgttcagttcccacctatgagtgagaaca
+tgcggtgtttagttttttgtccttgccatagtttgctgagaatgatggtt
+tccagcttcatccatgtccttgcaaaggacatgaactcatccttttttat
+ggctgcatactattccatggtgtatatgtgccacattttcttaatcaggt
+ctatcattgatggacatttgggttggttccaagtctgtgatattgtgaat
+agtgtcacaataaacatatgtgtgcatgtgtctttatagcagcaggattt
+ataatcctttgggtatatactcagtaatgggatggcttggtcaaatggaa
+tttctagttctagatccttgaggaatcgccacactgtcttccacaatggt
+tgaactagtttacagtcccaccaacagtgtaaaagtgctcctatttctcc
+acatcctctccagcaccttttgtttcctggcttgttaatgattggcattc
+taactgttgtgagatggtatttcattgtggttttgatttgcgtttctctg
+atggccagtgatgatcagtattttttcatgtgtctgttggctgccgatcc
+cacagaaatacaaagtaccatcagagaatactataaacacctcaacgcaa
+ataaactagaaaatctagaaaaatggataaattcctcgacatatacaccc
+tcccaagactaaaccaggaagaagttgaatccctgaatagaccaataaca
+ggctctgaaattgaggcaataatgaatatgctaccaacccaaaaaagtcc
+aggaccagaggcattcacagccgaattctaccagaggtacaaagaggagc
+tggtaccattccttctgaaaccattccaatcaatagaaaaagagggaatc
+ctccctaactcattttatgaggccagcatcatccttattccaaagcatgg
+cagagacaaagcaaaacaaaagagaattttagaccaatatccctgatgaa
+catcgacgcaaaaatcctcaataaaatcctggcaaactgaatccagcagc
+acatcaaaaagcttatccaccatgatcaagttggcttcatccctgggata
+caaggctggttcaacatatgcaaatcaataaacataatccatcatataaa
+cagaatcaaagacaaaaaccacatgattatctcaatagatgcagaaaagg
+cctttgacacaattcaacagcccttcatgctaaaaactctcaataaacta
+ggtattcatgggatgtatctcaaaataataagagctatttatgacaaacc
+cacagccaatgccataatgaatgggcagaaactggaagcattccctttga
+aaactggcacaagacagggatgccctctctcaccactcctattcaacata
+gtgttggaagttctggccagggcaatcaggcaggagaaagaaatacaggc
+tattcaattaggaaaagaggaagtcaaattgtccctgtttgcagatgaca
+tgattgtatatttagaaaaccccatcatctcagcccaaaatctccttaag
+ctgataagcaacttcaacaaagtctcaggatacaaaatcaacgtgcaaaa
+atcacaagcattcatatacaccaataacagacaaacagggagccaaatta
+tgagtgaattctcaAAGTCCATTTTCttttttttaaatattattatacaa
+gtttaatatataGTCAAATGCACAACAATTTATCCTCTGGATTGGGAACA
+AGAGATTTCTAGACATCTCAGCTTTAGCCAGTTTATTATACACCTACTGC
+TTCATAGTTGAGTTCTTCCAGAATATCTGTTAGAACCCCTGATAGCATAC
+TATTTTGTGATGAGATAAATACTTTAAAAATTATATGATCACAGTAGCAT
+GGAATGACATTTCCTTAATGCTATGTTTGAGGGCCTTTTTCTTGTTTCTG
+CTAGTAGAATCTGTTCTACCATTACTTATATACAAACATTATTTATTGCC
+AACATGATACACATTATATGGTGTGGATCCAGTAAATATTTGTAAATTAA
+CTGATTTGGCACCCCACAATATCTCAAGACATGAGATTTAAGAAGAAAAG
+AGCTTGACTAGTAAACCTGGTAGAGAAAATGCCTTTATACAGTTAGTATA
+TCCCACAATACTATCAACAAGTAGATTGGATTTTATTGTTATAACAGAAT
+TGAGTGAGATTGTGAATAATAAGAAAGTTGAGTTGTGGTGCATTGTCCTT
+AGAAGTTTCCTTCCTTTCTTTCCTTCTGTTCAGTGTTGTGACCTCAAATA
+AGGGGCACAGATGCCTCCTCGGGCAGCTTGGGGCAAGTGATCTACTTTCT
+TTTTTTTTTCTTTTTTAAAAttttattattattatactttaagttttagg
+gtacatgtgcacaacgtgcaggtttgttacatatgtatacatgtgccctt
+ttggtgtgctgcacctattaactcatcattaagcattaggtatatctcct
+aatgctatccctcctcactccccccaccccaccacagtccccggtgtgta
+atgttccccttcctgtgtccatgtattctgattgttcaattcccacctat
+gagtgagaacatgcggtgtttggttttttgtccttgtgatagtttgctga
+gaatgatggtttgcagcttcatccatgtccccacaaaggacatgaactca
+tcattttttatggctgcatagtattccatggtgtatatgtgccacatttt
+cttaatccagtctatcattgttggacatttgggttggttccaagtctttg
+ctattgtgaatagtgctgcaataaacgtacgtgtgcatgtgtctttatag
+cagcaggatttataatcctttgggtatatactcagtaatgagatggctgg
+gtcaaatggtatttctagttctagatccctgaggaatcgccacaccgact
+tccacaatggttgagctagttcacagtcccaccaacagtgtaaaagtgtt
+cctatttctccacatcctctccagcacctgttgtttcctgactttttaat
+gatcaccattctaactggtgtgagatggtactcattgtggttttgatttg
+catttctctgatggccagtgatgatgagcattttttcatgtgtcttttgg
+ctccataaatgtcttcttttgagaagtgtctgttcatatccttcgtccac
+tttttgatggggttgtttgtttttttcttgtaaatttgtttgagttcatt
+gtagattctagatattagccctttgtcagatgagtaggttgtgccatccc
+catcaagctaccaatgactttcttcacagaattggaaaaaacttctttaa
+agttcatatggaaccaaaaaagagcccgcattgccaagtcaatcctaagc
+caaaatatcaaagctggaggcatcatgctacctgacttcaaactatacta
+caaggttacagtctgacacacagagctagtgaaatttaggcagagcaact
+gcacaggcatgtgcagagaccaggagccttagatacttgggctttctggg
+ctcccctaaaaaagtagttgcaactcaagcaaagcaggaacagacccccg
+tacataccctaggaaagaggctgaatccagggggccaagcagcaacagtc
+tacaggccccacttccatggcatctcacaggataagacccagtggcttgg
+aattccagccaggcaccggtagtagtgttacacctctctgagacagagct
+cctgtggagaggggccaggggccaacctccatctttgctgtttggacaac
+tttgctgtttcagccttcgagctttggagagtccaagccaaccgggggtg
+gaagggactcctgagcacagcacaactgctctgtgaaaatgtggccagtc
+tgcttctttaaatgggtccctgatcccattccttctcactgggtgggacc
+tcccaactagggtctccagccacccccaccactgttatctggctaaacag
+ttttgaaacctccttaggatagagctcccagagagaaaagtgaaccgaca
+tctttgctgtttgtgtgacaaccattccagccttcaggttttggagagtc
+caagctgaccaggggagaaagggattacccaacacagcacagctgttata
+caaaaacatggctagactgctgtttaaaacaagtttccaatcccgttcct
+cctcactaggcaggacctcccaaccagaacctccagccaccctcgagggt
+gttctttggccaacagagatccgaatacttcctcagttggagctcccaag
+gggaggggcaggcctccatctttgctctttgggtgacttagctgtttcac
+ccttttcgctttgagattctgaggtgacaaaaggctgaagcagacaccca
+gcacagcagagctgctctatgaaaacatggcaagactgatttttaaagca
+agtctctgatcctattcctcctcactggaggtgacctcccaactggggtc
+tccagccagctccttcagatgcattcaggctggcaaaaagtccatacctc
+cctgggatggaggtcccagagggaggggcaggttgccatttttactgttt
+tgcagcctttggtggtaatacctccaggtaccagaaactccaaggtgact
+agcaactggagtgggcatccagcataccacagcaatccggcaaagaaaat
+gtctagcctgttacattggtatctgtttccatatctcatcaccaggcaag
+tcttccagacctgggcctccagccatcatctgccagagatactgagccag
+tagcaactttacaactccctggacagagtttccaggggcaactgaaagtc
+tttctaccactgcctctgtagtggacctgtctttgctaaccttggactaa
+caaaggagtaaaaaccctacctaagtgccttatccacacctccaacaagc
+tgcagttgacccaagaagaggaggccagtttgtctccaatgggtcctaca
+caccccctgctgctcatcaccagacaaggaacccctggcttgggcccaca
+gcacaaaccctccatcctaggctgatttcactgcacaattgctgacccac
+atttctctggggtggagcccccaggaggcaagcaaagtggtggcacagca
+agccagctgatatggagcccagagggtttagtgttggagcatctgtagtg
+gagtgtggccaggtacggccatccctcttggctcagcttgctcccataag
+agacttcagacctaggggaatggtcagatctgatctctgccatgcagtct
+tgcacaccagatggggctgatccaacctgagcactccttggtctcctggc
+ctctttcagggtttcaccctggacactccagcttacaaggcagtcttgga
+tgccctggggacacacaccttaccttctgcactagtagactgcgcctgat
+cagtggagagtgccaaaaatgtggcccctatggccctgcacagcctgcat
+attccatcctcatactgcagctttcctcaagtccatggcaactctccaca
+tccctttgctggcacctgtctgcatgagtaggttttgcttcacatgctct
+gccaacacacgggattgcagtacacccccaccacctccactgaacaccaa
+tgaagatgaagccttagtgggcacagagccagcaagccccacccccacca
+gcacctagcccctgtgctaatgctgcacagagaacaaggtatcctcccac
+accccgagtgatcactcctgcttgcagggaacaaagaaggcacccagacc
+tgtgctggccaacaaccttccaaaagccaataccacctccactgcaacag
+tgcacacaatcttcagcaggggctttctgctccccaccacccccagctgc
+ctagcctctgccactgtggtaaatgcctgcaggaaggcaggtacccctgt
+atttgctaacactcttgctgcagctgctgcacattgggccccacagcaca
+gtggactgcaaacctcatggaccagagaacaaagtcagggccccagagtt
+agcatatgtaggccaggggttgggagctgagcactggccccctaaaagct
+ttctgaaatgaagccatttggctgaatcaaacttgtacctcaatcaaacc
+atcaaggtcatgaataaaagaaaagaaaagaaaagaaaagaaaagaaaag
+aaacccagccaaaggtcagcaacctcaaagattgtaggtacataaaccca
+caaatatgagaaagaatcagtgcaagaacacaaaaaactcaaaaagccag
+agtgccttctttcctacaaatgaccatatcacctgtccagcaagggttca
+caaccaggctgaggctgagatggctgaaatgacagaagtagatttcagaa
+catgaacaggaatgaagttcattgagctacaagagtacattgtgacccac
+tgcaagaaagctaaaaattatgataaaacattgcaggagctgacagacaa
+aatagccagtatacagaagaacacaattgacctgacagagctaaaaacac
+actacaagaattttataattctatcacatgtattaatagcagaatagacc
+aaatggaggagtctcagagcttgaatactgtctttttgaaataagacagg
+cagacaagaatagagaaaaaagaataaaaagaaatgaacagagcctccaa
+gaaatatggaattatgtaaagagattgaatctatgacgggctggtgtacc
+tgaaagagatggggagaatggaaccaacttggaaaacatattttaggata
+ttatccatgagaatgtccccaatgtagctaggaaggccaacatacaaatt
+caggaaatactgagaaccccagtaagatataccacaagaagatcatcccc
+aagacacaatcatcagattctccaaggttgaaatgaatgagaaaaatgtt
+aaagacagctagagacaaagctcaggtcatctacaaaaggaagcccattg
+gactaaaagtggatttctcagctaaaaccctacaagccagaagagatttg
+gggctaatattcaacactcttaaagaaaagaaattcaaaccaagaatttc
+atatctggccaaactaaacttcataagcaaaggagaaatcagatcttttt
+cagacaagcaaatgctgagggaaattgttaccaccagatctgtcttacaa
+gaactcctgaaggaagcacccaatatgcaaaggaaagactgttaccagcc
+actacaaaaacacactgaattacacagtccagtgacactataaatcaacc
+acataaacaagtctgcaaaataaccagccagcattatgatgacaagataa
+aagacatatcaatactaaagttgaatgtaaatgggatacatgccccaatt
+aaaggtcacagagtgtcaagctggataaagagccaaggcccattgctatg
+ttgccctcaagtgacccatctcacgtgtaatgacacacactggctcaaaa
+taaagggatggagaaataccaaccaagcaaatggaaaacataaaaacaat
+cctagtttctgacaaaacagaatttaaaacaacaaagatcaaagaagaca
+aagaagggcatcatataatggtaaagggttcagttgacaaagataatcta
+gccattctaaatatatatgcactcaacacaggagcacccagtttcataaa
+gcaagtacatagagactttcaaagagtcttagactcccactcaataacag
+tgggagactttaacaccctacagacaatattagttcaatcattgagacag
+aatattaacaatgatattcaggacttgaactcagcactggatcaaatgga
+cctgatagttatctccacaacttttgacctcaaaccaacagaatatacat
+tattctcatcaacacattgcacttactctaaaatcaatcatataatcaga
+agtaaaacactccttagcaaacgtaagataactcaaatcataacaaacag
+tctctcagaacacaatgcaatcaaattcaaaatgaagattaagaaattta
+ctcagaactgtacaattacatggaaattgaataacctgctcctagatgac
+ttttgagtaaataatgaaattaaggcagaaaccaatatggtttttgacac
+taatggaacaaagagacaacataccagaatctctgggacacagctaaggc
+agtgttaagaggaaaatttatagcactaactgcccatgttaaaaagttag
+aaggatctctagttaacaacctaatgtcacaactaaaagaattagagagc
+caagagaaaacatattttaaagctagcagatgataagaaataaccaaaat
+tagagctgaactaaagaatataggcattaaaaaaacattcagaagatcaa
+agaatccaggagctttttttttttgaaaaaattaattaaatagatagact
+gctagctagatcaataaagaagaaaagagaaaagactcacgtaagaatgg
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+AGACTCAACAAATGGCAGAATTCACAATTAATGAAACACACAATAGTAGA
+TCAATGTAAAAATAACTTTAAAGATAAATCTGGTTTAAATATTGAAAGAG
+ACGAAAAAGGGACTGTAATTTGTAAGACAAGAACAGGAATCTTCTTTAAC
+AATAAGGTATATTTTAAAAAAGAAACAACTGGAAATTTTATAAATGAAAC
+AGGTATGCACTGAAATAAAACCATTAATAGATTGCTCATATATTTCGACA
+GAGTCAAGGCTGAGTATTGAGTTAGAACACAGATTAgacaggggtcacat
+ctaattcatccctgtaccccagtgtctaatacaATAAGGCCAACATATAA
+CAAGTGTTTCAAAATTGCTTATTAAATTGAACTGGGTAAGTGGTCTTCAG
+ATAGGCCAGACATCTCTGGGCTTCTCCAGTGTATAGGGGTTTCAGGGGGG
+CAGGACAGCCTCAAGTGGAACTACCTGAGGGCTGGGCAGAGCTGGGTGTG
+GTTCCTCGTGGGTGGAGTAGGCAATAAAGGCTATCTAGAAAAGAGGTACT
+GGCTTTACCATTCACCTCAGGGACTAACTAGTTTGTTCCCTCTCAGAGCT
+GGAGAGTGAATTATCTTCATTCAGCACATGTCTGGCTACTATTCATCCTC
+CCCGTGTCAAAGAtacttaaagtagtgaaaacagatcttattcagtaact
+actaacaatgctgaaaaaagctgagctccattccaatttgtgcaaaggtg
+gtttgggcattttaaagggagaatgatgttgggggctgagtagagtcaga
+gaagtgaaaactacaaaatattggtcagtgtaaatgcactgtgtttaggc
+catctgtgtttgttagccggcagttatcaaagttaggatttgtccttcca
+cagagactggaagacagggttcctatctttcttgattacatttcaaagaa
+atggctctcaggtccttgggagagacatttctaaattgtaagagatacat
+attcactgtaataagcccttttaaataagtgctctaaaaaagggaggtca
+gggtcttatcatcagattttggcaagaacaaacagtatattttcctggca
+gcattgaactttctcaggcagtcattttagtggggtttggggtcaattat
+agggacccagccttaggctgtgagaaaccatgctagagtttagttagttc
+ccttactactacaggggtttggacagaagtgttagttccaggagttctgc
+agttctcCCCTGTTAGAAACTCTAAGGATGTCCATGGCTATATTTATGTG
+ACAAAACATTATATAAATGGTTGATGTTAACAACCTGCCAAAGATTATTT
+TTCTTACTCCCTCCCTCCTAGGCCTTTTGCAACCCCCACCCCCATTACAG
+AGAAAGGGGAACAATCCTGTGTGCAACCAGCTCTCCATACCTGGCCCCCA
+CAGCTGGATCTCAGGGTGATCTCCTTTACCACCTGGAATGATAAATACCT
+TCTTCCAGGACAGCAGCCCTCTTTATCTTGCAGAAGGAGGCAATCCAGGC
+TGGGTCCTTCGCCAGGGTACCATTTTCCTGCAGCCTCTACAGGAAAATAA
+GCTCGTCTGAGCTGTGGCCTGAGCAGGTCAAGTCTTCAGTAGAGAGGTCA
+ACTTTAGAAACAATGGCTATTCTTGTGTCTTCCCTTTCTCTATCCTCCTT
+CCCTTCTATATTACCAAAGAAGTGAACACTTAGAGGACAGAAACTTTATC
+CTGTCTAGCCCATGCCAAAGAAGATGTTCTCAAGAGAAGAACAGTTTGAA
+AGAGGCTGCTTGGACCTTAGGCCTCAGCTCCCAACTCCCTCCCTAACTCT
+TTCCCCTTAGAAAGGAAATCATCCTCACTGACTGAAGCCCTGAGTGGCAA
+GTCAGCAGGTGGTTTCCTGTAGGACACTGAGGTCTGCTTAAATAGACCAC
+CCATATGCTTCCATAAAAATATCTTGTGTATTGGAGTCTACAAATAATAT
+ATTCTTGATGCACCTAAACCTCACTAATTCATAACCACCTGGGGTTAACA
+TTTGCCTGAAGTATTTTCTAAAGAAAACAAAGACTAGTGATTCTAACAAC
+CCAGATGTTGTTTGACTTCAGCTACCCAGGTGTTGACAAGTAGTAGTTTT
+AAAAGCAGTTGTATGGCATGGAAATATCACTAGACTAAGATACAACTGGT
+TTGGGTCACAGTTCTGAAATCATCAAATGGTAGATATGTGACTGGGATTT
+TCTATCAATTTATTGAAAACAGCATTAAGTggcctagaaagatgtgagta
+actttcccaagttcacacagctagtaagtgacagaaaaagtaccgtccag
+atctagagttcttaaccattccaaatatattgccccatccTTATCAGGTG
+CTTGTTTATTCCTATGGTTTCTAGAGAGCAAAAGTATTAATATTTCAGGG
+TACACTTTTTTGCAACTTTTTTTGGCAACTATCTTCAAATCCTGCCTGCA
+GAGAATTCCTAAAGATATTGTTGAGCACTCATTGAGATGGAAGACAAACC
+CTGTTCAACGAGAAATCTTACTGTCTGGAGATCCCCTCTAAGAAAGAAGA
+AGGAGACTGCAGGGGTCTTGTCTGAACATGAAAGACACTTATGAGTTGGt
+ctagattgtcagtattggaggatttaggggcagcaatccttggggcaggg
+ggaatttccttgaaatccacatatgccagtctagctcagcttttgcttgg
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/phiX.fasta	Fri Sep 28 13:53:48 2012 -0400
@@ -0,0 +1,79 @@
+>phiX174
+GAGTTTTATCGCTTCCATGACGCAGAAGTTAACACTTTCGGATATTTCTGATGAGTCGAAAAATTATCTT
+GATAAAGCAGGAATTACTACTGCTTGTTTACGAATTAAATCGAAGTGGACTGCTGGCGGAAAATGAGAAA
+ATTCGACCTATCCTTGCGCAGCTCGAGAAGCTCTTACTTTGCGACCTTTCGCCATCAACTAACGATTCTG
+TCAAAAACTGACGCGTTGGATGAGGAGAAGTGGCTTAATATGCTTGGCACGTTCGTCAAGGACTGGTTTA
+GATATGAGTCACATTTTGTTCATGGTAGAGATTCTCTTGTTGACATTTTAAAAGAGCGTGGATTACTATC
+TGAGTCCGATGCTGTTCAACCACTAATAGGTAAGAAATCATGAGTCAAGTTACTGAACAATCCGTACGTT
+TCCAGACCGCTTTGGCCTCTATTAAGCTCATTCAGGCTTCTGCCGTTTTGGATTTAACCGAAGATGATTT
+CGATTTTCTGACGAGTAACAAAGTTTGGATTGCTACTGACCGCTCTCGTGCTCGTCGCTGCGTTGAGGCT
+TGCGTTTATGGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCG
+TCATTGCTTATTATGTTCATCCCGTCAACATTCAAACGGCCTGTCTCATCATGGAAGGCGCTGAATTTAC
+GGAAAACATTATTAATGGCGTCGAGCGTCCGGTTAAAGCCGCTGAATTGTTCGCGTTTACCTTGCGTGTA
+CGCGCAGGAAACACTGACGTTCTTACTGACGCAGAAGAAAACGTGCGTCAAAAATTACGTGCAGAAGGAG
+TGATGTAATGTCTAAAGGTAAAAAACGTTCTGGCGCTCGCCCTGGTCGTCCGCAGCCGTTGCGAGGTACT
+AAAGGCAAGCGTAAAGGCGCTCGTCTTTGGTATGTAGGTGGTCAACAATTTTAATTGCAGGGGCTTCGGC
+CCCTTACTTGAGGATAAATTATGTCTAATATTCAAACTGGCGCCGAGCGTATGCCGCATGACCTTTCCCA
+TCTTGGCTTCCTTGCTGGTCAGATTGGTCGTCTTATTACCATTTCAACTACTCCGGTTATCGCTGGCGAC
+TCCTTCGAGATGGACGCCGTTGGCGCTCTCCGTCTTTCTCCATTGCGTCGTGGCCTTGCTATTGACTCTA
+CTGTAGACATTTTTACTTTTTATGTCCCTCATCGTCACGTTTATGGTGAACAGTGGATTAAGTTCATGAA
+GGATGGTGTTAATGCCACTCCTCTCCCGACTGTTAACACTACTGGTTATATTGACCATGCCGCTTTTCTT
+GGCACGATTAACCCTGATACCAATAAAATCCCTAAGCATTTGTTTCAGGGTTATTTGAATATCTATAACA
+ACTATTTTAAAGCGCCGTGGATGCCTGACCGTACCGAGGCTAACCCTAATGAGCTTAATCAAGATGATGC
+TCGTTATGGTTTCCGTTGCTGCCATCTCAAAAACATTTGGACTGCTCCGCTTCCTCCTGAGACTGAGCTT
+TCTCGCCAAATGACGACTTCTACCACATCTATTGACATTATGGGTCTGCAAGCTGCTTATGCTAATTTGC
+ATACTGACCAAGAACGTGATTACTTCATGCAGCGTTACCGTGATGTTATTTCTTCATTTGGAGGTAAAAC
+CTCTTATGACGCTGACAACCGTCCTTTACTTGTCATGCGCTCTAATCTCTGGGCATCTGGCTATGATGTT
+GATGGAACTGACCAAACGTCGTTAGGCCAGTTTTCTGGTCGTGTTCAACAGACCTATAAACATTCTGTGC
+CGCGTTTCTTTGTTCCTGAGCATGGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCTACTGCGAC
+TAAAGAGATTCAGTACCTTAACGCTAAAGGTGCTTTGACTTATACCGATATTGCTGGCGACCCTGTTTTG
+TATGGCAACTTGCCGCCGCGTGAAATTTCTATGAAGGATGTTTTCCGTTCTGGTGATTCGTCTAAGAAGT
+TTAAGATTGCTGAGGGTCAGTGGTATCGTTATGCGCCTTCGTATGTTTCTCCTGCTTATCACCTTCTTGA
+AGGCTTCCCATTCATTCAGGAACCGCCTTCTGGTGATTTGCAAGAACGCGTACTTATTCGCCACCATGAT
+TATGACCAGTGTTTCCAGTCCGTTCAGTTGTTGCAGTGGAATAGTCAGGTTAAATTTAATGTGACCGTTT
+ATCGCAATCTGCCGACCACTCGCGATTCAATCATGACTTCGTGATAAAAGATTGAGTGTGAGGTTATAAC
+GCCGAAGCGGTAAAAATTTTAATTTTTGCCGCTGAGGGGTTGACCAAGCGAAGCGCGGTAGGTTTTCTGC
+TTAGGAGTTTAATCATGTTTCAGACTTTTATTTCTCGCCATAATTCAAACTTTTTTTCTGATAAGCTGGT
+TCTCACTTCTGTTACTCCAGCTTCTTCGGCACCTGTTTTACAGACACCTAAAGCTACATCGTCAACGTTA
+TATTTTGATAGTTTGACGGTTAATGCTGGTAATGGTGGTTTTCTTCATTGCATTCAGATGGATACATCTG
+TCAACGCCGCTAATCAGGTTGTTTCTGTTGGTGCTGATATTGCTTTTGATGCCGACCCTAAATTTTTTGC
+CTGTTTGGTTCGCTTTGAGTCTTCTTCGGTTCCGACTACCCTCCCGACTGCCTATGATGTTTATCCTTTG
+AATGGTCGCCATGATGGTGGTTATTATACCGTCAAGGACTGTGTGACTATTGACGTCCTTCCCCGTACGC
+CGGGCAATAATGTTTATGTTGGTTTCATGGTTTGGTCTAACTTTACCGCTACTAAATGCCGCGGATTGGT
+TTCGCTGAATCAGGTTATTAAAGAGATTATTTGTCTCCAGCCACTTAAGTGAGGTGATTTATGTTTGGTG
+CTATTGCTGGCGGTATTGCTTCTGCTCTTGCTGGTGGCGCCATGTCTAAATTGTTTGGAGGCGGTCAAAA
+AGCCGCCTCCGGTGGCATTCAAGGTGATGTGCTTGCTACCGATAACAATACTGTAGGCATGGGTGATGCT
+GGTATTAAATCTGCCATTCAAGGCTCTAATGTTCCTAACCCTGATGAGGCCGCCCCTAGTTTTGTTTCTG
+GTGCTATGGCTAAAGCTGGTAAAGGACTTCTTGAAGGTACGTTGCAGGCTGGCACTTCTGCCGTTTCTGA
+TAAGTTGCTTGATTTGGTTGGACTTGGTGGCAAGTCTGCCGCTGATAAAGGAAAGGATACTCGTGATTAT
+CTTGCTGCTGCATTTCCTGAGCTTAATGCTTGGGAGCGTGCTGGTGCTGATGCTTCCTCTGCTGGTATGG
+TTGACGCCGGATTTGAGAATCAAAAAGAGCTTACTAAAATGCAACTGGACAATCAGAAAGAGATTGCCGA
+GATGCAAAATGAGACTCAAAAAGAGATTGCTGGCATTCAGTCGGCGACTTCACGCCAGAATACGAAAGAC
+CAGGTATATGCACAAAATGAGATGCTTGCTTATCAACAGAAGGAGTCTACTGCTCGCGTTGCGTCTATTA
+TGGAAAACACCAATCTTTCCAAGCAACAGCAGGTTTCCGAGATTATGCGCCAAATGCTTACTCAAGCTCA
+AACGGCTGGTCAGTATTTTACCAATGACCAAATCAAAGAAATGACTCGCAAGGTTAGTGCTGAGGTTGAC
+TTAGTTCATCAGCAAACGCAGAATCAGCGGTATGGCTCTTCTCATATTGGCGCTACTGCAAAGGATATTT
+CTAATGTCGTCACTGATGCTGCTTCTGGTGTGGTTGATATTTTTCATGGTATTGATAAAGCTGTTGCCGA
+TACTTGGAACAATTTCTGGAAAGACGGTAAAGCTGATGGTATTGGCTCTAATTTGTCTAGGAAATAACCG
+TCAGGATTGACACCCTCCCAATTGTATGTTTTCATGCCTCCAAATCTTGGAGGCTTTTTTATGGTTCGTT
+CTTATTACCCTTCTGAATGTCACGCTGATTATTTTGACTTTGAGCGTATCGAGGCTCTTAAACCTGCTAT
+TGAGGCTTGTGGCATTTCTACTCTTTCTCAATCCCCAATGCTTGGCTTCCATAAGCAGATGGATAACCGC
+ATCAAGCTCTTGGAAGAGATTCTGTCTTTTCGTATGCAGGGCGTTGAGTTCGATAATGGTGATATGTATG
+TTGACGGCCATAAGGCTGCTTCTGACGTTCGTGATGAGTTTGTATCTGTTACTGAGAAGTTAATGGATGA
+ATTGGCACAATGCTACAATGTGCTCCCCCAACTTGATATTAATAACACTATAGACCACCGCCCCGAAGGG
+GACGAAAAATGGTTTTTAGAGAACGAGAAGACGGTTACGCAGTTTTGCCGCAAGCTGGCTGCTGAACGCC
+CTCTTAAGGATATTCGCGATGAGTATAATTACCCCAAAAAGAAAGGTATTAAGGATGAGTGTTCAAGATT
+GCTGGAGGCCTCCACTATGAAATCGCGTAGAGGCTTTACTATTCAGCGTTTGATGAATGCAATGCGACAG
+GCTCATGCTGATGGTTGGTTTATCGTTTTTGACACTCTCACGTTGGCTGACGACCGATTAGAGGCGTTTT
+ATGATAATCCCAATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTCTTGCTGCCGAGGGTCG
+CAAGGCTAATGATTCACACGCCGACTGCTATCAGTATTTTTGTGTGCCTGAGTATGGTACAGCTAATGGC
+CGTCTTCATTTCCATGCGGTGCATTTTATGCGGACACTTCCTACAGGTAGCGTTGACCCTAATTTTGGTC
+GTCGGGTACGCAATCGCCGCCAGTTAAATAGCTTGCAAAATACGTGGCCTTATGGTTACAGTATGCCCAT
+CGCAGTTCGCTACACGCAGGACGCTTTTTCACGTTCTGGTTGGTTGTGGCCTGTTGATGCTAAAGGTGAG
+CCGCTTAAAGCTACCAGTTATATGGCTGTTGGTTTCTATGTGGCTAAATACGTTAACAAAAAGTCAGATA
+TGGACCTTGCTGCTAAAGGTCTAGGAGCTAAAGAATGGAACAACTCACTAAAAACCAAGCTGTCGCTACT
+TCCCAAGAAGCTGTTCAGAATCAGAATGAGCCGCAACTTCGGGATGAAAATGCTCACAATGACAAATCTG
+TCCACGGAGTGCTTAATCCAACTTACCAAGCTGGGTTACGACGCGACGCCGTTCAACCAGATATTGAAGC
+AGAACGCAAAAAGAGAGATGAGATTGAGGCTGGGAAAAGTTACTGTAGCCGACGTTTTGGCGGCGCAACC
+TGTGACGACAAATCTGCTCAAATTTATGCGCGCTTCGATAAAAATGATTGGCGTATCCAACCTGCA
+
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool-data/bwa_index.loc.sample	Fri Sep 28 13:53:48 2012 -0400
@@ -0,0 +1,38 @@
+#This is a sample file distributed with Galaxy that enables tools
+#to use a directory of BWA indexed sequences data files. You will need
+#to create these data files and then create a bwa_index.loc file
+#similar to this one (store it in this directory) that points to
+#the directories in which those files are stored. The bwa_index.loc
+#file has this format (longer white space characters are TAB characters):
+#
+#<unique_build_id>   <dbkey>   <display_name>   <file_path>
+#
+#So, for example, if you had phiX indexed stored in 
+#/depot/data2/galaxy/phiX/base/, 
+#then the bwa_index.loc entry would look like this:
+#
+#phiX174   phiX   phiX Pretty   /depot/data2/galaxy/phiX/base/phiX.fa
+#
+#and your /depot/data2/galaxy/phiX/base/ directory
+#would contain phiX.fa.* files:
+#
+#-rw-r--r--  1 james    universe 830134 2005-09-13 10:12 phiX.fa.amb
+#-rw-r--r--  1 james    universe 527388 2005-09-13 10:12 phiX.fa.ann
+#-rw-r--r--  1 james    universe 269808 2005-09-13 10:12 phiX.fa.bwt
+#...etc...
+#
+#Your bwa_index.loc file should include an entry per line for each
+#index set you have stored. The "file" in the path does not actually
+#exist, but it is the prefix for the actual index files.  For example:
+#
+#phiX174				phiX	phiX174			/depot/data2/galaxy/phiX/base/phiX.fa
+#hg18canon				hg18	hg18 Canonical	/depot/data2/galaxy/hg18/base/hg18canon.fa
+#hg18full				hg18	hg18 Full		/depot/data2/galaxy/hg18/base/hg18full.fa
+#/orig/path/hg19.fa		hg19	hg19			/depot/data2/galaxy/hg19/base/hg19.fa
+#...etc...
+#
+#Note that for backwards compatibility with workflows, the unique ID of
+#an entry must be the path that was in the original loc file, because that
+#is the value stored in the workflow for that parameter. That is why the
+#hg19 entry above looks odd. New genomes can be better-looking.
+#
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool-data/bwa_index_color.loc.sample	Fri Sep 28 13:53:48 2012 -0400
@@ -0,0 +1,38 @@
+#This is a sample file distributed with Galaxy that enables tools
+#to use a directory of BWA indexed sequences data files. You will need
+#to create these data files and then create a bwa_index_color.loc file
+#similar to this one (store it in this directory) that points to
+#the directories in which those files are stored. The bwa_index_color.loc
+#file has this format (longer white space characters are TAB characters):
+#
+#<unique_build_id>	<dbkey>		<display_name>	<file_path>
+#
+#So, for example, if you had phiX indexed stored in 
+#/depot/data2/galaxy/phiX/color/, 
+#then the bwa_index.loc entry would look like this:
+#
+#phiX174   phiX   phiX Pretty   /depot/data2/galaxy/phiX/color/phiX.fa
+#
+#and your /depot/data2/galaxy/phiX/color/ directory
+#would contain phiX.fa.* files:
+#
+#-rw-r--r--  1 james    universe 830134 2005-09-13 10:12 phiX.fa.amb
+#-rw-r--r--  1 james    universe 527388 2005-09-13 10:12 phiX.fa.ann
+#-rw-r--r--  1 james    universe 269808 2005-09-13 10:12 phiX.fa.bwt
+#...etc...
+#
+#Your bwa_index_color.loc file should include an entry per line for each
+#index set you have stored. The "file" in the path does not actually
+#exist, but it is the prefix for the actual index files.  For example:
+#
+#phiX174				phiX	phiX174				/depot/data2/galaxy/phiX/color/phiX.fa
+#hg18canon				hg18	hg18 Canonical		/depot/data2/galaxy/hg18/color/hg18canon.fa
+#hg18full				hg18	hg18 Full			/depot/data2/galaxy/hg18/color/hg18full.fa
+#/orig/path/hg19.fa		hg19	hg19				/depot/data2/galaxy/hg19/color/hg19.fa
+#...etc...
+#
+#Note that for backwards compatibility with workflows, the unique ID of
+#an entry must be the path that was in the original loc file, because that
+#is the value stored in the workflow for that parameter. That is why the
+#hg19 entry above looks odd. New genomes can be better-looking.
+#
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_data_table_conf.xml.sample	Fri Sep 28 13:53:48 2012 -0400
@@ -0,0 +1,13 @@
+<!-- Use the file tool_data_table_conf.xml.oldlocstyle if you don't want to update your loc files as changed in revision 4550:535d276c92bc-->
+<tables>
+    <!-- Locations of indexes in the BWA mapper format -->
+    <table name="bwa_indexes" comment_char="#">
+        <columns>value, dbkey, name, path</columns>
+        <file path="tool-data/bwa_index.loc" />
+    </table>
+    <!-- Locations of indexes in the BWA color-space mapper format -->
+    <table name="bwa_indexes_color" comment_char="#">
+        <columns>value, dbkey, name, path</columns>
+        <file path="tool-data/bwa_index_color.loc" />
+    </table>
+</tables>
\ No newline at end of file
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Fri Sep 28 13:53:48 2012 -0400
@@ -0,0 +1,21 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="bwa" version="0.5.9">
+        <install version="1.0">
+            <actions>
+                <action type="download_by_url">http://downloads.sourceforge.net/project/bio-bwa/bwa-0.5.9.tar.bz2</action>
+                <action type="shell_command">make</action>
+                <action type="move_file">
+                    <source>bwa</source>
+                    <destination>$INSTALL_DIR/bin</destination>
+                </action>
+                <action type="set_environment">
+                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
+                </action>
+            </actions>
+        </install>
+        <readme>
+Compiling BWA requires zlib and libpthread to be present on your system.
+        </readme>
+    </package>
+</tool_dependency>
\ No newline at end of file