Mercurial > repos > devteam > cummerbund_to_tabular

comparison test-data/isoform_fpkm.tabular @ 0:648c27c78eed draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Initial commit with version 1.0.0 of the tool.
author devteam
date Tue, 23 Dec 2014 16:01:24 -0500
parents
children
comparison
equal deleted inserted replaced
-1:000000000000 0:648c27c78eed
1 tracking_id class_code nearest_ref_id gene_id gene_short_name tss_id locus length coverage q1_FPKM q1_conf_lo q1_conf_hi q1_status q2_FPKM q2_conf_lo q2_conf_hi q2_status
2 TCONS_00000001 c Xkr4 XLOC_000001 Xkr4 TCONS_00000001 chr1:3204754-3204833 79 - 0 0 0 OK 9459860 33303500 0 OK
3 TCONS_00000002 - - XLOC_000002 - TCONS_00000002 chr1:3111449-3111490 41 - 0 0 0 OK 243637000 952723000 0 OK
4 TCONS_00000003 - - XLOC_000003 - TCONS_00000003 chr1:3111545-3111576 31 - 0 0 0 OK 0 0 0 OK
5 TCONS_00000009 - - XLOC_000011 - TCONS_00000009 chr1:3192441-3192494 53 - 0 0 0 OK 97002000 317699000 0 OK
6 TCONS_00000010 - - XLOC_000012 - TCONS_00000010 chr1:3192550-3192629 79 - 0 0 0 OK 4729930 18496100 0 OK
7 TCONS_00000011 - - XLOC_000014 - TCONS_00000011 chr1:3192731-3192811 80 - 0 0 0 OK 0 0 0 OK
8 TCONS_00000012 - - XLOC_000015 - TCONS_00000012 chr1:3192940-3193042 102 - 0 0 0 OK 6863860 21424300 0 OK
9 TCONS_00000013 - - XLOC_000016 - TCONS_00000013 chr1:3194185-3194226 41 - 0 0 0 OK 243637000 952723000 0 OK
10 TCONS_00000014 - - XLOC_000017 - TCONS_00000014 chr1:3194302-3194329 27 - 0 0 0 OK 0 0 0 OK
11 TCONS_00000015 - - XLOC_000019 - TCONS_00000015 chr1:3195083-3195110 27 - 0 0 0 OK 0 0 0 OK
12 TCONS_00000016 - - XLOC_000020 - TCONS_00000016 chr1:3195450-3195477 27 - 0 0 0 OK 0 0 0 OK
13 TCONS_00000017 - - XLOC_000021 - TCONS_00000017 chr1:3197089-3197116 27 - 0 0 0 OK 0 0 0 OK
14 TCONS_00000018 - - XLOC_000022 - TCONS_00000018 chr1:3197246-3197273 27 - 0 0 0 OK 0 0 0 OK
15 TCONS_00000019 - - XLOC_000023 - TCONS_00000019 chr1:3197346-3197373 27 - 0 0 0 OK 0 0 0 OK
16 TCONS_00000020 - - XLOC_000025 - TCONS_00000020 chr1:3200022-3200191 169 - 826392 2653610 0 OK 803108 2630330 0 OK
17 TCONS_00000021 - - XLOC_000026 - TCONS_00000021 chr1:3200325-3200352 27 - 0 0 0 OK 0 0 0 OK
18 TCONS_00000022 - - XLOC_000029 - TCONS_00000022 chr1:3201077-3201481 404 - 66791.3 214473 0 OK 324548 802006 0 OK
19 TCONS_00000023 - - XLOC_000031 - TCONS_00000023 chr1:3201672-3201699 27 - 0 0 0 OK 0 0 0 OK
20 TCONS_00000024 i Xkr4 XLOC_000034 Xkr4 TCONS_00000024 chr1:3212213-3212292 79 - 0 0 0 OK 9459860 33303500 0 OK
21 TCONS_00000025 i Xkr4 XLOC_000035 Xkr4 TCONS_00000025 chr1:3212367-3212439 72 - 0 0 0 OK 28083700 87658400 0 OK
22 TCONS_00000026 i Xkr4 XLOC_000037 Xkr4 TCONS_00000026 chr1:3213095-3213242 97 - 4244630 15581400 0 OK 2082090 8141870 0 OK
23 TCONS_00000027 i Xkr4 XLOC_000040 Xkr4 TCONS_00000027 chr1:3242633-3242923 290 - 48522.7 185766 0 OK 424400 1302890 0 OK
24 TCONS_00000028 i Xkr4 XLOC_000042 Xkr4 TCONS_00000028 chr1:3243018-3243079 61 - 0 0 0 OK 30305300 106690000 0 OK
25 TCONS_00000029 i Xkr4 XLOC_000044 Xkr4 TCONS_00000029 chr1:3243347-3243401 54 - 0 0 0 OK 57999100 204186000 0 OK
26 TCONS_00000030 i Xkr4 XLOC_000046 Xkr4 TCONS_00000030 chr1:3256974-3257011 37 - 0 0 0 OK 2354230000 8288060000 0 OK
27 TCONS_00000031 i Xkr4 XLOC_000048 Xkr4 TCONS_00000031 chr1:3277190-3277218 28 - 0 0 0 OK 0 0 0 OK
28 TCONS_00000033 i Xkr4 XLOC_000052 Xkr4 TCONS_00000033 chr1:3280686-3280741 55 - 0 0 0 OK 26133400 102193000 0 OK
29 TCONS_00000034 i Xkr4 XLOC_000057 Xkr4 TCONS_00000034 chr1:3290488-3290553 65 - 0 0 0 OK 11150300 43602600 0 OK
30 TCONS_00000037 i Xkr4 XLOC_000060 Xkr4 TCONS_00000037 chr1:3299443-3299664 55 - 0 163195 0 OK 0 163195 0 OK
31 TCONS_00000038 i Xkr4 XLOC_000062 Xkr4 TCONS_00000038 chr1:3300051-3300078 27 - 0 0 0 OK 0 0 0 OK
32 TCONS_00000039 i Xkr4 XLOC_000065 Xkr4 TCONS_00000039 chr1:3318999-3319051 52 - 0 0 0 OK 0 0 0 OK
33 TCONS_00000040 i Xkr4 XLOC_000068 Xkr4 TCONS_00000040 chr1:3355887-3356119 27 - 0 332434 0 OK 0 0 0 OK
34 TCONS_00000041 i Xkr4 XLOC_000071 Xkr4 TCONS_00000041 chr1:3363214-3363278 64 - 0 0 0 OK 0 0 0 OK
35 TCONS_00000042 i Xkr4 XLOC_000073 Xkr4 TCONS_00000042 chr1:3363753-3363849 96 - 0 0 0 OK 0 0 0 OK
36 TCONS_00000043 i Xkr4 XLOC_000075 Xkr4 TCONS_00000043 chr1:3367135-3367162 27 - 0 0 0 OK 0 0 0 OK
37 TCONS_00000044 i Xkr4 XLOC_000077 Xkr4 TCONS_00000044 chr1:3367333-3367382 49 - 0 0 0 OK 0 0 0 OK
38 TCONS_00000045 i Xkr4 XLOC_000080 Xkr4 TCONS_00000045 chr1:3377211-3377262 51 - 0 0 0 OK 0 0 0 OK
39 TCONS_00000046 i Xkr4 XLOC_000083 Xkr4 TCONS_00000046 chr1:3391325-3391352 27 - 0 0 0 OK 0 0 0 OK
40 TCONS_00000047 i Xkr4 XLOC_000084 Xkr4 TCONS_00000047 chr1:3435841-3435880 39 - 0 0 0 OK 0 0 0 OK
41 TCONS_00000048 i Xkr4 XLOC_000085 Xkr4 TCONS_00000048 chr1:3447761-3447788 27 - 0 0 0 OK 0 0 0 OK
42 TCONS_00000049 i Xkr4 XLOC_000086 Xkr4 TCONS_00000049 chr1:3450906-3450965 59 - 0 0 0 OK 0 0 0 OK
43 TCONS_00000050 i Xkr4 XLOC_000087 Xkr4 TCONS_00000050 chr1:3451051-3451109 58 - 0 0 0 OK 0 0 0 OK
44 TCONS_00000051 - - XLOC_000004 - TCONS_00000051 chr1:3174765-3174792 27 - 0 0 0 OK 0 0 0 OK
45 TCONS_00000052 - - XLOC_000005 - TCONS_00000052 chr1:3187401-3187428 27 - 0 0 0 OK 0 0 0 OK
46 TCONS_00000053 - - XLOC_000006 - TCONS_00000053 chr1:3188521-3188548 27 - 0 0 0 OK 0 0 0 OK
47 TCONS_00000054 - - XLOC_000007 - TCONS_00000054 chr1:3189810-3190789 979 - 358326 581565 135086 OK 522345 633911 410780 OK
48 TCONS_00000055 - - XLOC_000008 - TCONS_00000055 chr1:3190858-3191434 576 - 408511 762496 54526.1 OK 420354 779200 61509.1 OK
49 TCONS_00000056 - - XLOC_000009 - TCONS_00000056 chr1:3191512-3192077 565 - 433286 803020 63552.3 OK 842157 1341790 342520 OK
50 TCONS_00000057 - - XLOC_000010 - TCONS_00000057 chr1:3192250-3192336 86 - 3441510 13175600 0 OK 3344550 13078600 0 OK
51 TCONS_00000058 - - XLOC_000013 - TCONS_00000058 chr1:3192649-3192676 27 - 0 0 0 OK 0 0 0 OK
52 TCONS_00000059 - - XLOC_000018 - TCONS_00000059 chr1:3194706-3194733 27 - 0 0 0 OK 0 0 0 OK
53 TCONS_00000060 - - XLOC_000024 - TCONS_00000060 chr1:3197425-3197452 27 - 0 0 0 OK 0 0 0 OK
54 TCONS_00000062 - - XLOC_000027 - TCONS_00000062 chr1:3200430-3200457 27 - 0 0 0 OK 0 0 0 OK
55 TCONS_00000063 - - XLOC_000028 - TCONS_00000063 chr1:3201007-3201039 32 - 0 0 0 OK 0 0 0 OK
56 TCONS_00000065 - - XLOC_000030 - TCONS_00000065 chr1:3201596-3201666 70 - 16359000 59640900 0 OK 0 0 0 OK
57 TCONS_00000066 - - XLOC_000032 - TCONS_00000066 chr1:3201725-3201809 84 - 15136000 46339600 0 OK 0 0 0 OK
58 TCONS_00000067 i Xkr4 XLOC_000033 Xkr4 TCONS_00000067 chr1:3211521-3211561 40 - 0 0 0 OK 0 0 0 OK
59 TCONS_00000068 i Xkr4 XLOC_000036 Xkr4 TCONS_00000068 chr1:3212717-3212801 84 - 3784000 14486800 0 OK 0 0 0 OK
60 TCONS_00000069 i Xkr4 XLOC_000037 Xkr4 TCONS_00000069 chr1:3213095-3213242 124 - 863189 4252220 0 OK 0 72384.9 0 OK
61 TCONS_00000070 i Xkr4 XLOC_000038 Xkr4 TCONS_00000070 chr1:3240606-3240633 27 - 0 0 0 OK 0 0 0 OK
62 TCONS_00000071 i Xkr4 XLOC_000039 Xkr4 TCONS_00000071 chr1:3242479-3242512 33 - 0 0 0 OK 0 0 0 OK
63 TCONS_00000072 i Xkr4 XLOC_000041 Xkr4 TCONS_00000072 chr1:3242924-3243005 81 - 0 0 0 OK 0 0 0 OK
64 TCONS_00000073 i Xkr4 XLOC_000043 Xkr4 TCONS_00000073 chr1:3243108-3243154 46 - 86160000 329857000 0 OK 0 0 0 OK
65 TCONS_00000074 i Xkr4 XLOC_000045 Xkr4 TCONS_00000074 chr1:3254079-3254106 27 - 0 0 0 OK 0 0 0 OK
66 TCONS_00000075 i Xkr4 XLOC_000047 Xkr4 TCONS_00000075 chr1:3277155-3277182 27 - 0 0 0 OK 0 0 0 OK
67 TCONS_00000076 i Xkr4 XLOC_000049 Xkr4 TCONS_00000076 chr1:3277913-3278390 477 - 228872 561229 0 OK 47662.2 156103 0 OK
68 TCONS_00000077 i Xkr4 XLOC_000050 Xkr4 TCONS_00000077 chr1:3280117-3280144 27 - 0 0 0 OK 0 0 0 OK
69 TCONS_00000078 i Xkr4 XLOC_000051 Xkr4 TCONS_00000078 chr1:3280498-3280525 27 - 0 0 0 OK 0 0 0 OK
70 TCONS_00000079 i Xkr4 XLOC_000053 Xkr4 TCONS_00000079 chr1:3282504-3282531 27 - 0 0 0 OK 0 0 0 OK
71 TCONS_00000080 i Xkr4 XLOC_000054 Xkr4 TCONS_00000080 chr1:3282650-3282677 27 - 0 0 0 OK 0 0 0 OK
72 TCONS_00000081 i Xkr4 XLOC_000055 Xkr4 TCONS_00000081 chr1:3282760-3282832 72 - 0 0 0 OK 0 0 0 OK
73 TCONS_00000082 i Xkr4 XLOC_000056 Xkr4 TCONS_00000082 chr1:3284966-3284993 27 - 0 0 0 OK 0 0 0 OK
74 TCONS_00000083 i Xkr4 XLOC_000058 Xkr4 TCONS_00000083 chr1:3290798-3290859 61 - 15591900 59692600 0 OK 0 0 0 OK
75 TCONS_00000084 i Xkr4 XLOC_000059 Xkr4 TCONS_00000084 chr1:3290919-3291273 354 - 294879 740137 0 OK 85971.3 281572 0 OK
76 TCONS_00000085 i Xkr4 XLOC_000060 Xkr4 TCONS_00000085 chr1:3299443-3299664 197 - 807732 2390560 0 OK 156995 613917 0 OK
77 TCONS_00000086 i Xkr4 XLOC_000061 Xkr4 TCONS_00000086 chr1:3299691-3299733 42 - 0 0 0 OK 0 0 0 OK
78 TCONS_00000087 i Xkr4 XLOC_000063 Xkr4 TCONS_00000087 chr1:3307748-3307775 27 - 0 0 0 OK 0 0 0 OK
79 TCONS_00000088 i Xkr4 XLOC_000064 Xkr4 TCONS_00000088 chr1:3318620-3318647 27 - 0 0 0 OK 0 0 0 OK
80 TCONS_00000089 i Xkr4 XLOC_000066 Xkr4 TCONS_00000089 chr1:3330527-3330554 27 - 0 0 0 OK 0 0 0 OK
81 TCONS_00000090 i Xkr4 XLOC_000067 Xkr4 TCONS_00000090 chr1:3351240-3351311 71 - 7681690 29408800 0 OK 0 0 0 OK
82 TCONS_00000091 i Xkr4 XLOC_000068 Xkr4 TCONS_00000091 chr1:3355887-3356119 212 - 504790 1545440 0 OK 0 0 0 OK
83 TCONS_00000092 i Xkr4 XLOC_000069 Xkr4 TCONS_00000092 chr1:3356180-3356225 45 - 102717000 393246000 0 OK 0 0 0 OK
84 TCONS_00000093 i Xkr4 XLOC_000070 Xkr4 TCONS_00000093 chr1:3363076-3363176 100 - 3810010 13890300 0 OK 0 0 0 OK
85 TCONS_00000094 i Xkr4 XLOC_000072 Xkr4 TCONS_00000094 chr1:3363387-3363446 59 - 55365400 177783000 0 OK 0 0 0 OK
86 TCONS_00000095 i Xkr4 XLOC_000074 Xkr4 TCONS_00000095 chr1:3364871-3364919 48 - 62896600 240795000 0 OK 0 0 0 OK
87 TCONS_00000096 i Xkr4 XLOC_000076 Xkr4 TCONS_00000096 chr1:3367210-3367237 27 - 0 0 0 OK 0 0 0 OK
88 TCONS_00000097 i Xkr4 XLOC_000078 Xkr4 TCONS_00000097 chr1:3369580-3369607 27 - 0 0 0 OK 0 0 0 OK
89 TCONS_00000098 i Xkr4 XLOC_000079 Xkr4 TCONS_00000098 chr1:3375001-3375028 27 - 0 0 0 OK 0 0 0 OK
90 TCONS_00000099 i Xkr4 XLOC_000081 Xkr4 TCONS_00000099 chr1:3379888-3379915 27 - 0 0 0 OK 0 0 0 OK
91 TCONS_00000100 i Xkr4 XLOC_000082 Xkr4 TCONS_00000100 chr1:3386739-3386836 97 - 0 0 0 OK 0 0 0 OK