Mercurial > repos > devteam > data_manager_bowtie2_index_builder
annotate tool_data_table_conf.xml.sample @ 1:9bf4eb559ed5 draft
planemo upload commit 4381f4022eca6f3c58ae1d01096795cd28c15062
author | devteam |
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date | Mon, 10 Aug 2015 16:44:10 -0400 |
parents | 9458af1ab90b |
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rev | line source |
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0 | 1 <!-- Use the file tool_data_table_conf.xml.oldlocstyle if you don't want to update your loc files as changed in revision 4550:535d276c92bc--> |
2 <tables> | |
3 <!-- Locations of all fasta files under genome directory --> | |
4 <table name="all_fasta" comment_char="#"> | |
5 <columns>value, dbkey, name, path</columns> | |
6 <file path="tool-data/all_fasta.loc" /> | |
7 </table> | |
8 <!-- Locations of indexes in the Bowtie2 mapper format --> | |
9 <table name="bowtie2_indexes" comment_char="#"> | |
10 <columns>value, dbkey, name, path</columns> | |
11 <file path="tool-data/bowtie2_indices.loc" /> | |
12 </table> | |
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9bf4eb559ed5
planemo upload commit 4381f4022eca6f3c58ae1d01096795cd28c15062
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13 <!-- Locations of indexes in the Bowtie2 mapper format for TopHat2 to use --> |
9bf4eb559ed5
planemo upload commit 4381f4022eca6f3c58ae1d01096795cd28c15062
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14 <table name="tophat2_indexes" comment_char="#"> |
9bf4eb559ed5
planemo upload commit 4381f4022eca6f3c58ae1d01096795cd28c15062
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15 <columns>value, dbkey, name, path</columns> |
9bf4eb559ed5
planemo upload commit 4381f4022eca6f3c58ae1d01096795cd28c15062
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16 <file path="tool-data/tophat2_indices.loc" /> |
9bf4eb559ed5
planemo upload commit 4381f4022eca6f3c58ae1d01096795cd28c15062
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17 </table> |
0 | 18 </tables> |