Mercurial > repos > devteam > data_manager_fetch_index_maf
diff data_manager_conf.xml @ 0:475b10cd2ae8 draft default tip
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author | devteam |
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date | Tue, 09 Jun 2020 14:27:06 -0400 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/data_manager_conf.xml Tue Jun 09 14:27:06 2020 -0400 @@ -0,0 +1,21 @@ +<?xml version="1.0"?> +<data_managers> + + <data_manager tool_file="data_manager/data_manager_fetch_and_index_maf.xml" id="data_manager_fetch_and_index_maf"> + <data_table name="indexed_maf_files"> + <output> + <column name="name" /> + <column name="value" /> + <column name="indexed_for" /> + <column name="exists_in_maf" /> + <column name="path" output_ref="out_file" > + <move type="directory" relativize_symlinks="True"> + <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${dbkey}/align/${value}</target> + </move> + <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${dbkey}/align/${value}</value_translation> + <value_translation type="function">abspath</value_translation> + </column> + </output> + </data_table> + </data_manager> +</data_managers> \ No newline at end of file