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1 <?xml version="1.0"?>
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2 <data_managers>
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3
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4 <data_manager tool_file="data_manager/data_manager_fetch_and_index_maf.xml" id="data_manager_fetch_and_index_maf">
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5 <data_table name="indexed_maf_files">
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6 <output>
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7 <column name="name" />
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8 <column name="value" />
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9 <column name="indexed_for" />
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10 <column name="exists_in_maf" />
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11 <column name="path" output_ref="out_file" >
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12 <move type="directory" relativize_symlinks="True">
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13 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${dbkey}/align/${value}</target>
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14 </move>
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15 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${dbkey}/align/${value}</value_translation>
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16 <value_translation type="function">abspath</value_translation>
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17 </column>
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18 </output>
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19 </data_table>
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20 </data_manager>
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21 </data_managers> |
