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annotate test-data/emboss_tranalign_out.fasta @ 5:2cf967772a40

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Fix for emboss_format_corrector.py. Datatypes should be changed before the job is run.
author Daniel Blankenberg <dan@bx.psu.edu>
date Fri, 11 Oct 2013 14:10:00 -0400
parents 7334f6d0ac17
children 832c20329690
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7334f6d0ac17 Uploaded emboss functional test input and output data files.
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2 cctctttctcgactccatcttcgcggtagctgggaccgccgttcagtcgccaatatgcag
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3 ctctttgtccgcgcccaggagctacacaccttcgaggtgaccggccaggaaacggtcgcc
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4 cagatcaaggctcatgtagcctca---ctggagggcattgccccggaagatcaagtcgtg
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5 ctcctggcaggc---cccctggaggatgaggccactctgggccagtgcggggtggaggcc
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6 ctgactaccctggaagtagcaggccgcatgcttgga---ggtaaagttcatggttccctg
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8 aagaagacaggtcgggctaagcggcggatgcagtacaaccggcgctttgtcaacgttgtg
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9 cccacctttggcaagaagaagggccccaatgccaactct
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12 ctctttgtccgcgcccaggagctacacaccttcgaggtgaccggccaggaaacggtcgcc
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13 cagatcaaggctcatgtagcctca---ctggagggcattgccccggaagatcaagtcgtg
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19 >HSFAU3
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21 ctctttgtccgcgcccaggagctacacaccttcgaggtgaccggccaggaaacggtcgcc
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22 cagatcaaggctcatgtagcctca---ctggagggcattgccccggaagatcaagtcgtg
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23 ctcctggcaggcgcgcccctggaggatgaggccactctgggccagtgcggggtggaggcc
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24 ctgactaccctggaagtagcaggccgcatgcttgga---ggtaaagttcatggttccctg
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25 gcccgtgctggaaaagtgagaggtcagactcctaagggggccaaacaggagaagaagaag
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26 aagaagacaggtcgggctaagcggcggatgcagtacaaccggcgctttgtcaacgttgtg
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27 cccacctttggcaagaagaagggccccaatgccaactct
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30 ctctttgtccgcgcccaggagctacacaccttcgaggtgaccggccaggaaacggtcgcc
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31 cagatcaaggctcatgaaatagcctcactggagggcattgccccggaagatcaagtcgtg
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34 gcccgtgctggaaaagtgagaggtcagactcctaaggtggccaaacaggagaagaagaag
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35 aagaagacaggtcgggctaagcggcggatgcagtacaaccggcgctttgtcaacgttgtg
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36 cccacctttggcaagaagaagggccccaatgccaactct
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37 >HSFAU5
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39 ctctttgtccgcgcccaggagctacacaccttcgaggtgaccggccaggaaacggtcgcc
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42 ctgactaccctggaagtaggccgcatgctttttgga---ggtaaagttcatggttccctg
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43 gcccgtgctggaaaagtgagaggtcagactcctaaggtggccaaacaggagaagaagaag
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44 aagaagacaggtcgggctaagcggcggatgcagtacaaccggcgctttgtcaacgttgtg
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45 cccacctttggcaagaagaagggccccaatgccaactct