Mercurial > repos > devteam > emboss_5

annotate test-data/emboss_compseq_out.compseq @ 12:832c20329690 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit ca9a6baaede679d619675e48d665748a91950115
author iuc
date Mon, 23 Apr 2018 13:05:09 -0400
parents 7334f6d0ac17
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
1
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
1 #
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
2 # Output from 'compseq'
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
3 #
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
4 # The Expected frequencies are calculated on the (false) assumption that every
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
5 # word has equal frequency.
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
6 #
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
7 # The input sequences are:
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
8 # Sequence
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
9
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
10
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
11 Word size 2
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
12 Total count 560
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
13
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
14 #
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
15 # Word Obs Count Obs Frequency Exp Frequency Obs/Exp Frequency
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
16 #
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
17 AA 40 0.0714286 0.0625000 1.1428571
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
18 AC 27 0.0482143 0.0625000 0.7714286
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
19 AG 26 0.0464286 0.0625000 0.7428571
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
20 AT 41 0.0732143 0.0625000 1.1714286
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
21 CA 26 0.0464286 0.0625000 0.7428571
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
22 CC 24 0.0428571 0.0625000 0.6857143
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
23 CG 15 0.0267857 0.0625000 0.4285714
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
24 CT 41 0.0732143 0.0625000 1.1714286
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
25 GA 19 0.0339286 0.0625000 0.5428571
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
26 GC 17 0.0303571 0.0625000 0.4857143
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
27 GG 19 0.0339286 0.0625000 0.5428571
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
28 GT 43 0.0767857 0.0625000 1.2285714
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
29 TA 50 0.0892857 0.0625000 1.4285714
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
30 TC 38 0.0678571 0.0625000 1.0857143
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
31 TG 37 0.0660714 0.0625000 1.0571429
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
32 TT 97 0.1732143 0.0625000 2.7714286
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
33
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
34 Other 0 0.0000000 0.0000000 10000000000.0000000