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changeset 17:c15237684a01 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit e06f74f574276b793bf9c1c788de8d97db449af2
author iuc
date Fri, 01 Jun 2018 15:49:50 -0400
parents ff9530579d1f
children 3e1cdf5406db
files rgFastQC.xml
diffstat 1 files changed, 6 insertions(+), 6 deletions(-) [+]
line wrap: on
line diff
--- a/rgFastQC.xml	Sun Jan 14 09:31:51 2018 -0500
+++ b/rgFastQC.xml	Fri Jun 01 15:49:50 2018 -0400
@@ -1,12 +1,12 @@
-<tool id="fastqc" name="FastQC" version="0.71">
+<tool id="fastqc" name="FastQC" version="0.72">
     <description>Read Quality reports</description>
     <requirements>
-        <requirement type="package" version="0.11.6">fastqc</requirement>
+        <requirement type="package" version="0.11.7">fastqc</requirement>
     </requirements>
     <command detect_errors="exit_code"><![CDATA[
         #import re
         #set input_name = re.sub('[^\w\-\s]', '_', str($input_file.element_identifier))
-        
+
         #if $input_file.ext.endswith('.gz'):
             #set input_file_sl = $input_name + '.gz'
         #elif $input_file.ext.endswith('.bz2'):
@@ -27,15 +27,15 @@
         mkdir -p '${html_file.files_path}' &&
         fastqc
             --outdir '${html_file.files_path}'
-            
+
             #if $contaminants.dataset and str($contaminants) > ''
                 --contaminants '${contaminants}'
             #end if
-            
+
             #if $limits.dataset and str($limits) > ''
                 --limits '${limits}'
             #end if
-            
+
             --quiet
             --extract
             -f '${format}'