Mercurial > repos > devteam > lastz
comparison lastz_d.xml @ 7:10aca14c2332 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/lastz commit 13e9724b44888b0de9535ac7b561ad9686038413
author | iuc |
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date | Thu, 17 May 2018 04:29:13 -0400 |
parents | b6d7308c3728 |
children | e7f19d6a9af8 |
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6:b6d7308c3728 | 7:10aca14c2332 |
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1 <tool id="lastz_d_wrapper" name="LASTZ_D" version="1.3"> | 1 <tool id="lastz_d_wrapper" name="LASTZ_D" version="1.3.1"> |
2 <description>: estimate substitution scores matrix</description> | 2 <description>: estimate substitution scores matrix</description> |
3 <macros> | 3 <macros> |
4 <import>lastz_macros.xml</import> | 4 <import>lastz_macros.xml</import> |
5 </macros> | 5 </macros> |
6 <requirements> | 6 <requirements> |
7 <requirement type="package" version="@LASTZ_CONDA_VERSION@">lastz</requirement> | 7 <requirement type="package" version="@LASTZ_CONDA_VERSION@">lastz</requirement> |
8 <requirement type="package" version="1.0.6">bzip2</requirement> | |
8 </requirements> | 9 </requirements> |
9 <command detect_errors="exit_code"><![CDATA[ | 10 <command detect_errors="exit_code"><![CDATA[ |
10 lastz_D | 11 lastz_D |
11 @TARGET_INPUT_COMMAND_LINE@ | 12 @TARGET_INPUT_COMMAND_LINE@ |
12 '${query}' | 13 @query_input@ |
13 #if $score_file: | 14 #if $score_file: |
14 '--inferonly=${score_file}' | 15 '--inferonly=${score_file}' |
15 #else: | 16 #else: |
16 --inferonly | 17 --inferonly |
17 #end if | 18 #end if |