Mercurial > repos > devteam > lastz
view test-data/score_file.txt @ 6:b6d7308c3728 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/lastz commit c5379af63b23648020a4709f8ed9d9eac26582aa
author | iuc |
---|---|
date | Fri, 02 Mar 2018 12:07:00 -0500 |
parents | bd84ff27bc16 |
children |
line wrap: on
line source
# This matches the default scoring set for BLASTZ bad_score = X:-1000 # used for sub['X'][*] and sub[*]['X'] fill_score = -100 # used when sub[*][*] is not defined gap_open_penalty = 400 gap_extend_penalty = 30 A C G T A 91 -114 -31 -123 C -114 100 -125 -31 G -31 -125 100 -114 T -123 -31 -114 91