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view test-data/lastz_d_test2.out @ 5:bd84ff27bc16 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/lastz commit a0a0480a8df511d23ed6101a489ca06337f5ed56
author devteam
date Mon, 26 Feb 2018 15:37:53 -0500
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# (a LASTZ scoring set, created by "LASTZ --infer")

bad_score          = X:-1781 # used for sub[X][*] and sub[*][X]
fill_score         = -178    # used when sub[*][*] not otherwise defined
gap_open_penalty   = 400
gap_extend_penalty = 30

      A     C     G     T
A    72   -79   -49   -97
C   -79   100  -178   -49
G   -49  -178   100   -79
T   -97   -49   -79    72