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changeset 6:b6d7308c3728 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/lastz commit c5379af63b23648020a4709f8ed9d9eac26582aa
author iuc
date Fri, 02 Mar 2018 12:07:00 -0500
parents bd84ff27bc16
children 10aca14c2332
files lastz.xml lastz_d.xml lastz_macros.xml
diffstat 3 files changed, 3 insertions(+), 3 deletions(-) [+]
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line diff
--- a/lastz.xml	Mon Feb 26 15:37:53 2018 -0500
+++ b/lastz.xml	Fri Mar 02 12:07:00 2018 -0500
@@ -279,7 +279,7 @@
     </configfiles>
     <inputs>
         <expand macro="target_input"/>
-        <param name="query" format="fasta,fasta.gz,fastq.gz" type="data" label="Select QUERY sequence(s)" help="These are the sequences that you are aligning against TARGET"/>
+        <param name="query" format="fasta,fastq" type="data" label="Select QUERY sequence(s)" help="These are the sequences that you are aligning against TARGET"/>
 
         <section name="where_to_look" expanded="False" title="Where to look">
             <param name="strand" type="select" display="radio" label="which strand to search" argument="--strand" help="Search both strands or choose plus or minus">
--- a/lastz_d.xml	Mon Feb 26 15:37:53 2018 -0500
+++ b/lastz_d.xml	Fri Mar 02 12:07:00 2018 -0500
@@ -20,7 +20,7 @@
     </command>
     <inputs>
         <expand macro="target_input"/>
-        <param name="query" format="fasta,fasta.gz,fastq.gz" type="data" label="Select QUERY sequence(s)" help="These are the sequences that you are aligning against TARGET"/>
+        <param name="query" format="fasta,fastq" type="data" label="Select QUERY sequence(s)" help="These are the sequences that you are aligning against TARGET"/>
         <param name="score_file" type="data" format="txt" optional="true" label="Control file for inference" argument="--inferonly[=control_file]" help="Optional controf file. If nothing is selected, LASTZ_D uses default described in the manual"/>
      </inputs>
     <outputs>
--- a/lastz_macros.xml	Mon Feb 26 15:37:53 2018 -0500
+++ b/lastz_macros.xml	Fri Mar 02 12:07:00 2018 -0500
@@ -19,7 +19,7 @@
                 </param>
             </when>
             <when value="history">
-                <param name="target" type="data" format="fasta,fasta.gz" label="Select a reference dataset" />
+                <param name="target" type="data" format="fasta" label="Select a reference dataset" />
             </when>
         </conditional>
     </xml>