Mercurial > repos > devteam > microsats_alignment_level

changeset 3:df7548445f4e draft

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planemo upload commit 00a7926c285bc4a339bd7deebf40b28f39c7d947
author devteam
date Tue, 21 Jul 2015 15:35:46 -0400
parents ad471b193191
children 6f8257ad464b
files microsats_alignment_level.py tool_dependencies.xml
diffstat 2 files changed, 1 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/microsats_alignment_level.py	Fri Jan 16 14:51:32 2015 -0500
+++ b/microsats_alignment_level.py	Tue Jul 21 15:35:46 2015 -0400
@@ -42,7 +42,6 @@
             tmpin = tempfile.NamedTemporaryFile()
             tmpout = tempfile.NamedTemporaryFile()
             tmpin.write(block.strip())
-            tmpin.flush()
             cmdline = sputnik_cmd + " " + tmpin.name + "  > /dev/null 2>&1 >> " + tmpout.name
             try:
                 os.system(cmdline)
--- a/tool_dependencies.xml	Fri Jan 16 14:51:32 2015 -0500
+++ b/tool_dependencies.xml	Tue Jul 21 15:35:46 2015 -0400
@@ -1,6 +1,6 @@
 <?xml version="1.0"?>
 <tool_dependency>
   <package name="sputnik" version="1.0">
-      <repository changeset_revision="741d531ba353" name="package_sputnik_1_0" owner="devteam" prior_installation_required="False" toolshed="http://toolshed.g2.bx.psu.edu" />
+      <repository changeset_revision="741d531ba353" name="package_sputnik_1_0" owner="devteam" toolshed="https://toolshed.g2.bx.psu.edu" />
     </package>
 </tool_dependency>