diff test-data/blastx_rhodopsin_vs_four_human.xml @ 8:1f546099212f draft

Uploaded v0.0.17, default to extended 24 column tabular output (rather than standard 12 column output). This should avoid many cases of repeated BLAST jobs being run due to later needing the extra columns.

--- a/test-data/blastx_rhodopsin_vs_four_human.xml	Fri Feb 08 05:51:26 2013 -0500
+++ b/test-data/blastx_rhodopsin_vs_four_human.xml	Tue Feb 19 12:49:43 2013 -0500
@@ -1,8 +1,8 @@
 <?xml version="1.0"?>
-<!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "NCBI_BlastOutput.dtd">
+<!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd">
 <BlastOutput>
   <BlastOutput_program>blastx</BlastOutput_program>
-  <BlastOutput_version>BLASTX 2.2.25+</BlastOutput_version>
+  <BlastOutput_version>BLASTX 2.2.26+</BlastOutput_version>
   <BlastOutput_reference>Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&amp;auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), &quot;Gapped BLAST and PSI-BLAST: a new generation of protein database search programs&quot;, Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference>
   <BlastOutput_db></BlastOutput_db>
   <BlastOutput_query-ID>Query_1</BlastOutput_query-ID>
@@ -90,7 +90,7 @@
           <Hit_hsps>
             <Hsp>
               <Hsp_num>1</Hsp_num>
-              <Hsp_bit-score>662.143908370966</Hsp_bit-score>
+              <Hsp_bit-score>662.144</Hsp_bit-score>
               <Hsp_score>1707</Hsp_score>
               <Hsp_evalue>0</Hsp_evalue>
               <Hsp_query-from>1</Hsp_query-from>
@@ -194,9 +194,9 @@
           <Hit_hsps>
             <Hsp>
               <Hsp_num>1</Hsp_num>
-              <Hsp_bit-score>575.088804213644</Hsp_bit-score>
+              <Hsp_bit-score>575.089</Hsp_bit-score>
               <Hsp_score>1481</Hsp_score>
-              <Hsp_evalue>1.31349806431671e-168</Hsp_evalue>
+              <Hsp_evalue>0</Hsp_evalue>
               <Hsp_query-from>42</Hsp_query-from>
               <Hsp_query-to>1037</Hsp_query-to>
               <Hsp_hit-from>1</Hsp_hit-from>
@@ -298,9 +298,9 @@
           <Hit_hsps>
             <Hsp>
               <Hsp_num>1</Hsp_num>
-              <Hsp_bit-score>224.171990552935</Hsp_bit-score>
+              <Hsp_bit-score>224.172</Hsp_bit-score>
               <Hsp_score>570</Hsp_score>
-              <Hsp_evalue>1.57574304751949e-62</Hsp_evalue>
+              <Hsp_evalue>1.84906e-68</Hsp_evalue>
               <Hsp_query-from>1</Hsp_query-from>
               <Hsp_query-to>333</Hsp_query-to>
               <Hsp_hit-from>11</Hsp_hit-from>
@@ -317,9 +317,9 @@
             </Hsp>
             <Hsp>
               <Hsp_num>2</Hsp_num>
-              <Hsp_bit-score>129.412894877266</Hsp_bit-score>
+              <Hsp_bit-score>129.413</Hsp_bit-score>
               <Hsp_score>324</Hsp_score>
-              <Hsp_evalue>5.28220874623366e-34</Hsp_evalue>
+              <Hsp_evalue>4.62305e-36</Hsp_evalue>
               <Hsp_query-from>3174</Hsp_query-from>
               <Hsp_query-to>3368</Hsp_query-to>
               <Hsp_hit-from>248</Hsp_hit-from>
@@ -336,9 +336,9 @@
             </Hsp>
             <Hsp>
               <Hsp_num>3</Hsp_num>
-              <Hsp_bit-score>120.938504207085</Hsp_bit-score>
+              <Hsp_bit-score>120.939</Hsp_bit-score>
               <Hsp_score>302</Hsp_score>
-              <Hsp_evalue>1.87871691987854e-31</Hsp_evalue>
+              <Hsp_evalue>2.85192e-33</Hsp_evalue>
               <Hsp_query-from>2855</Hsp_query-from>
               <Hsp_query-to>3022</Hsp_query-to>
               <Hsp_hit-from>177</Hsp_hit-from>
@@ -355,9 +355,9 @@
             </Hsp>
             <Hsp>
               <Hsp_num>4</Hsp_num>
-              <Hsp_bit-score>118.242107175663</Hsp_bit-score>
+              <Hsp_bit-score>118.242</Hsp_bit-score>
               <Hsp_score>295</Hsp_score>
-              <Hsp_evalue>1.21774886471054e-30</Hsp_evalue>
+              <Hsp_evalue>2.16231e-32</Hsp_evalue>
               <Hsp_query-from>1404</Hsp_query-from>
               <Hsp_query-to>1580</Hsp_query-to>
               <Hsp_hit-from>119</Hsp_hit-from>
@@ -374,9 +374,9 @@
             </Hsp>
             <Hsp>
               <Hsp_num>5</Hsp_num>
-              <Hsp_bit-score>56.2249754529693</Hsp_bit-score>
+              <Hsp_bit-score>56.225</Hsp_bit-score>
               <Hsp_score>134</Hsp_score>
-              <Hsp_evalue>5.68296036241677e-12</Hsp_evalue>
+              <Hsp_evalue>2.05678e-12</Hsp_evalue>
               <Hsp_query-from>4222</Hsp_query-from>
               <Hsp_query-to>4296</Hsp_query-to>
               <Hsp_hit-from>312</Hsp_hit-from>
@@ -478,9 +478,9 @@
           <Hit_hsps>
             <Hsp>
               <Hsp_num>1</Hsp_num>
-              <Hsp_bit-score>613.993961381297</Hsp_bit-score>
+              <Hsp_bit-score>613.994</Hsp_bit-score>
               <Hsp_score>1582</Hsp_score>
-              <Hsp_evalue>1.57028732393616e-180</Hsp_evalue>
+              <Hsp_evalue>0</Hsp_evalue>
               <Hsp_query-from>1</Hsp_query-from>
               <Hsp_query-to>978</Hsp_query-to>
               <Hsp_hit-from>11</Hsp_hit-from>
@@ -582,7 +582,7 @@
           <Hit_hsps>
             <Hsp>
               <Hsp_num>1</Hsp_num>
-              <Hsp_bit-score>641.728330847346</Hsp_bit-score>
+              <Hsp_bit-score>641.728</Hsp_bit-score>
               <Hsp_score>1654</Hsp_score>
               <Hsp_evalue>0</Hsp_evalue>
               <Hsp_query-from>1</Hsp_query-from>
@@ -686,9 +686,9 @@
           <Hit_hsps>
             <Hsp>
               <Hsp_num>1</Hsp_num>
-              <Hsp_bit-score>559.295621601033</Hsp_bit-score>
+              <Hsp_bit-score>559.296</Hsp_bit-score>
               <Hsp_score>1440</Hsp_score>
-              <Hsp_evalue>6.32632556748138e-164</Hsp_evalue>
+              <Hsp_evalue>0</Hsp_evalue>
               <Hsp_query-from>23</Hsp_query-from>
               <Hsp_query-to>1018</Hsp_query-to>
               <Hsp_hit-from>1</Hsp_hit-from>
@@ -719,4 +719,4 @@
       </Iteration_stat>
     </Iteration>
   </BlastOutput_iterations>
-</BlastOutput>
+</BlastOutput>
\ No newline at end of file