diff tools/ncbi_blast_plus/README.rst @ 18:577d9c12411a draft

v0.1.06, now using BLAST+ 2.2.31

--- a/tools/ncbi_blast_plus/README.rst	Fri Sep 04 09:45:57 2015 -0400
+++ b/tools/ncbi_blast_plus/README.rst	Mon Sep 07 04:44:24 2015 -0400
@@ -221,6 +221,8 @@
 v0.1.05 - Define ``parallelism`` tag via a macro (internal change only).
         - Define wrapper versions via a macro (internal change only).
         - Update citation information now GigaScience paper is out.
+v0.1.06 - Now depends on ``package_blast_plus_2_2_31`` in ToolShed.
+        - Tests updated for BLAST+ 2.2.31 instead of BLAST+ 2.2.30.
 ======= ======================================================================
 
 
@@ -245,12 +247,12 @@
 Planemo commands (which requires you have set your Tool Shed access details in
 ``~/.planemo.yml`` and that you have access rights on the Tool Shed)::
 
-    $ planemo shed_update --shed_target testtoolshed --check_diff ~/repositories/galaxy_blast/tools/ncbi_blast_plus/
+    $ planemo shed_update -t testtoolshed --check_diff ~/repositories/galaxy_blast/tools/ncbi_blast_plus/
     ...
 
 or::
 
-    $ planemo shed_update --shed_target toolshed --check_diff ~/repositories/galaxy_blast/tools/ncbi_blast_plus/
+    $ planemo shed_update -t toolshed --check_diff ~/repositories/galaxy_blast/tools/ncbi_blast_plus/
     ...
 
 To just build and check the tar ball, use::