Mercurial > repos > devteam > package_bamtools_2_3_0_2d7685d2ae

changeset 0:4e49af060657 draft

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Uploaded
author devteam
date Fri, 09 Jan 2015 09:29:05 -0500
parents
children 7d6da4982f19
files tool_dependencies.xml
diffstat 1 files changed, 23 insertions(+), 0 deletions(-) [+]
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line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Fri Jan 09 09:29:05 2015 -0500
@@ -0,0 +1,23 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="bamtools" version="2.3.0_2d7685d2ae">
+        <install version="1.0">
+            <actions_group>
+                <actions architecture="x86_64" os="linux">
+                    <action type="download_by_url">http://depot.galaxyproject.org/package/linux/x86_64/bamtools/bamtools-2.3.0_2d7685d2ae.tar.gz</action>
+                    <action type="move_directory_files">
+                        <source_directory>.</source_directory>
+                        <destination_directory>$INSTALL_DIR</destination_directory>
+                    </action>       
+                </actions>                
+                <action type="set_environment">
+                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
+                </action>
+            </actions_group>
+        </install>
+        <readme>
+Binary files in this package are compiled from source code version 2d7685d2ae
+This is package dependency for tools relying on bamtools toolkit developed by by Derek Barnett (https://github.com/pezmaster31/bamtools). This package is distributed as x86_64 binaries only. These binaries should work on any of our stated supported linux platforms other than RHEL/CentOS 5.
+        </readme>
+    </package>
+</tool_dependency>