Mercurial > repos > devteam > samtools_flagstat
diff test-data/samtools_flagstat_out1.txt @ 2:0072bf593791 draft
Uploaded
author | devteam |
---|---|
date | Tue, 21 Apr 2015 15:56:53 -0400 |
parents | 13c4ad597626 |
children | cc61ade70eb8 |
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--- a/test-data/samtools_flagstat_out1.txt Thu Mar 27 15:23:45 2014 -0400 +++ b/test-data/samtools_flagstat_out1.txt Tue Apr 21 15:56:53 2015 -0400 @@ -1,11 +1,13 @@ -10 + 0 in total (QC-passed reads + QC-failed reads) +200 + 0 in total (QC-passed reads + QC-failed reads) +0 + 0 secondary +0 + 0 supplementary 0 + 0 duplicates -10 + 0 mapped (100.00%:nan%) -0 + 0 paired in sequencing -0 + 0 read1 -0 + 0 read2 -0 + 0 properly paired (nan%:nan%) +25 + 0 mapped (12.50%:nan%) +200 + 0 paired in sequencing +100 + 0 read1 +100 + 0 read2 +0 + 0 properly paired (0.00%:nan%) 0 + 0 with itself and mate mapped -0 + 0 singletons (nan%:nan%) +25 + 0 singletons (12.50%:nan%) 0 + 0 with mate mapped to a different chr 0 + 0 with mate mapped to a different chr (mapQ>=5)