Mercurial > repos > devteam > samtools_flagstat

annotate test-data/samtools_flagstat_out1.txt @ 2:0072bf593791 draft

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Uploaded
author devteam
date Tue, 21 Apr 2015 15:56:53 -0400
parents 13c4ad597626
children cc61ade70eb8
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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2
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parents: 0
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1 200 + 0 in total (QC-passed reads + QC-failed reads)
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2 0 + 0 secondary
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3 0 + 0 supplementary
0
13c4ad597626 Uploaded tool tarball.
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4 0 + 0 duplicates
2
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5 25 + 0 mapped (12.50%:nan%)
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6 200 + 0 paired in sequencing
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7 100 + 0 read1
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8 100 + 0 read2
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parents: 0
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9 0 + 0 properly paired (0.00%:nan%)
0
13c4ad597626 Uploaded tool tarball.
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parents:
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10 0 + 0 with itself and mate mapped
2
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parents: 0
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11 25 + 0 singletons (12.50%:nan%)
0
13c4ad597626 Uploaded tool tarball.
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12 0 + 0 with mate mapped to a different chr
13c4ad597626 Uploaded tool tarball.
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13 0 + 0 with mate mapped to a different chr (mapQ>=5)