Mercurial > repos > devteam > short_reads_trim_seq
changeset 1:25e6fe525306 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/short_reads_trim_seq commit a1517c9d22029095120643bbe2c8fa53754dd2b7
| author | devteam |
|---|---|
| date | Wed, 11 Nov 2015 12:27:21 -0500 |
| parents | f17a1585733b |
| children | |
| files | short_reads_trim_seq.xml |
| diffstat | 1 files changed, 3 insertions(+), 3 deletions(-) [+] |
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--- a/short_reads_trim_seq.xml Mon May 19 12:34:17 2014 -0400 +++ b/short_reads_trim_seq.xml Wed Nov 11 12:27:21 2015 -0500 @@ -8,8 +8,8 @@ <page> <param name="input1" type="data" format="fasta" label="Reads" /> <param name="input2" type="data" format="qualsolexa,qual454" label="Quality scores" /> - <param name="trim" type="integer" size="5" value="20" label="Minimal quality score" help="bases scoring below this value will trigger splitting"/> - <param name="length" type="integer" size="5" value="100" label="Minimal length of contiguous segment" help="report all high quality segments above this length. Setting this option to '0' will cause the program to return a single longest run of high quality bases per read" /> + <param name="trim" type="integer" value="20" label="Minimal quality score" help="bases scoring below this value will trigger splitting"/> + <param name="length" type="integer" value="100" label="Minimal length of contiguous segment" help="report all high quality segments above this length. Setting this option to '0' will cause the program to return a single longest run of high quality bases per read" /> <conditional name="sequencing_method_choice"> <param name="sequencer" type="select" label="Select technology"> <option value="454">Roche (454) or ABI SOLiD</option> @@ -22,7 +22,7 @@ </param> </when> <when value="Solexa"> - <param name="input3" type="integer" size="5" value="0" label="Restrict length of each read to" help="('0' = do not trim) The quality of Solexa reads drops towards the end. This option allows selecting the specified number of nucleotides from the beginning and then running the tool." /> + <param name="input3" type="integer" value="0" label="Restrict length of each read to" help="('0' = do not trim) The quality of Solexa reads drops towards the end. This option allows selecting the specified number of nucleotides from the beginning and then running the tool." /> </when> </conditional> </page>