Mercurial > repos > devteam > snpfreq
changeset 1:5c3ac057608b draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/hgv/snpfreq commit a1517c9d22029095120643bbe2c8fa53754dd2b7
| author | devteam |
|---|---|
| date | Wed, 11 Nov 2015 12:50:35 -0500 |
| parents | 72ea0d13dd66 |
| children | |
| files | snpFreq2.pl tool_dependencies.xml |
| diffstat | 2 files changed, 3 insertions(+), 3 deletions(-) [+] |
line wrap: on
line diff
--- a/snpFreq2.pl Mon Jul 28 11:56:46 2014 -0400 +++ b/snpFreq2.pl Wed Nov 11 12:50:35 2015 -0500 @@ -90,7 +90,7 @@ } close FH or die "Couldn't close $grpFile, $!\n"; if ($file =~ /.gz$/) { - open(FH, "zcat $file |") or die "Couldn't read $file, $!\n"; + open(FH, "zcat < $file |") or die "Couldn't read $file, $!\n"; }else { open(FH, $file) or die "Couldn't read $file, $!\n"; }
--- a/tool_dependencies.xml Mon Jul 28 11:56:46 2014 -0400 +++ b/tool_dependencies.xml Wed Nov 11 12:50:35 2015 -0500 @@ -1,9 +1,9 @@ <?xml version="1.0"?> <tool_dependency> <package name="bioc_qvalue" version="1.34.0"> - <repository changeset_revision="11735242a19e" name="package_bioc_qvalue_1_34_0" owner="devteam" toolshed="http://toolshed.g2.bx.psu.edu" /> + <repository changeset_revision="11735242a19e" name="package_bioc_qvalue_1_34_0" owner="devteam" toolshed="https://toolshed.g2.bx.psu.edu" /> </package> <package name="R" version="2.11.0"> - <repository changeset_revision="5824d2b3bc8b" name="package_r_2_11_0" owner="devteam" toolshed="http://toolshed.g2.bx.psu.edu" /> + <repository changeset_revision="5824d2b3bc8b" name="package_r_2_11_0" owner="devteam" toolshed="https://toolshed.g2.bx.psu.edu" /> </package> </tool_dependency>