annotate tables_arithmetic_operations.xml @ 1:2e9f3b6ebfbc draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/gops/tables_arithmetic_operations commit cae3e05d02e60f595bb8b6d77a84f030e9bd1689

<tool id="tables_arithmetic_operations" name="Arithmetic Operations" version="1.0.0">
    <description>on tables</description>
    <requirements>
        <requirement type="package" version="5.22.2.1">perl</requirement>
    </requirements>
    <command><![CDATA[
perl '$__tool_directory__/tables_arithmetic_operations.pl'
'$inputFile1'
'$inputFile2'
$inputArithmeticOperation3
'$outputFile1'
    ]]></command>
    <inputs>
        <param name="inputFile1" type="data" format="tabular" label="Select the first input tabular file"/>
        <param name="inputFile2" type="data" format="tabular" label="Select the second input tabular file"/>
        <param name="inputArithmeticOperation3" type="select" label="Choose the arithmetic operation:">
            <option value="Addition">Addition</option>
            <option value="Subtraction">Subtraction</option>
            <option value="Multiplication">Multiplication</option>
            <option value="Division">Division</option>
        </param>
    </inputs>
    <outputs>
        <data name="outputFile1" format="tabular" />
    </outputs>
    <tests>
        <test>
            <param name="inputFile1" value="numericalTable1.tabular" />
            <param name="inputFile2" value="numericalTable1.tabular" />
            <param name="inputArithmeticOperation3" value="Addition" />
            <output name="outputFile1" file="table_addition_result.tabular" />
        </test>
        <test>
            <param name="inputFile1" value="numericalTable1.tabular" />
            <param name="inputFile2" value="numericalTable1.tabular" />
            <param name="inputArithmeticOperation3" value="Subtraction" />
            <output name="outputFile1" file="table_subtraction_result.tabular" />
        </test>
        <test>
            <param name="inputFile1" value="numericalTable1.tabular" />
            <param name="inputFile2" value="numericalTable1.tabular" />
            <param name="inputArithmeticOperation3" value="Multiplication" />
            <output name="outputFile1" file="table_multiplication_result.tabular" />
        </test>
        <test>
            <param name="inputFile1" value="numericalTable1.tabular" />
            <param name="inputFile2" value="numericalTable1.tabular" />
            <param name="inputArithmeticOperation3" value="Division" />
            <output name="outputFile1" file="table_division_result.tabular" />
        </test>
    </tests>
    <help><![CDATA[
.. class:: infomark

**What it does**

This program implements arithmetic operations on tabular files data. The program takes three inputs:

- The first input is a TABULAR format file containing numbers only.
- The second input is a TABULAR format file containing numbers only.
- The third input is an arithmetic operation: +, -, x, or / for addition, subtraction, multiplication, or division, respectively.
- The output file is a TABULAR format file containing the result of implementing the arithmetic operation on both input files.


Notes:

- The two files must have the same number of columns and the same number of rows.
- The output file has the same number of columns and the same number of rows as each of the two input files.
- In case of division, none of the values in the second input file could be 0, otherwise the program will stop and report an error.

**Example**

Let us have the first input file as follows::

   5   4   0
  10  11  12
   1   3   1
   1   2   1
   2   0   4

And the second input file as follows::

   5   4   4
   2   5   8
   1   2   1
   3   2   5
   2   4   4

Running the program and choosing "Addition" as an arithmetic operation will give the following output::

  10   8   4
  12  16  20
   2   5   2
   4   4   6
   4   4   8
    ]]></help>
</tool>