changeset 7:052b357bb2b8

Update output type
author devteam@galaxyproject.org
date Tue, 11 Feb 2014 11:28:07 -0500
parents 359d85c79c6c
children b5955d7050d7
files tool_dependencies.xml tophat_fusion_post.xml
diffstat 2 files changed, 4 insertions(+), 4 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Mon Feb 10 12:55:22 2014 -0500
+++ b/tool_dependencies.xml	Tue Feb 11 11:28:07 2014 -0500
@@ -1,12 +1,12 @@
 <?xml version="1.0"?>
 <tool_dependency>
     <package name="blast+" version="2.2.28">
-        <repository changeset_revision="23b9ba41ad00" name="package_blast_plus_2_2_28" owner="iuc" toolshed="http://toolshed.g2.bx.psu.edu" />
+        <repository name="package_blast_plus_2_2_28" owner="iuc"/>
     </package>
     <package name="tophat2" version="2.0.9">
-        <repository changeset_revision="8549fd545473" name="package_tophat2_2_0_9" owner="devteam" toolshed="http://toolshed.g2.bx.psu.edu" />
+        <repository name="package_tophat2_2_0_9" owner="devteam"/>
     </package>
     <package name="bowtie" version="0.12.7">
-        <repository changeset_revision="028d22e7b70f" name="package_bowtie_0_12_7" owner="devteam" toolshed="http://toolshed.g2.bx.psu.edu" />
+        <repository name="package_bowtie_0_12_7" owner="devteam"/>
     </package>
 </tool_dependency>
--- a/tophat_fusion_post.xml	Mon Feb 10 12:55:22 2014 -0500
+++ b/tophat_fusion_post.xml	Tue Feb 11 11:28:07 2014 -0500
@@ -49,7 +49,7 @@
     </stdio>
 
     <outputs>
-        <data format="txt" name="results_txt" label="${tool.name} on ${on_string}: text results" from_work_dir="tophatfusion_out/result.txt"/>
+        <data format="tabular" name="results_txt" label="${tool.name} on ${on_string}: text results" from_work_dir="tophatfusion_out/result.txt"/>
         <data format="html" name="results_html" label="${tool.name} on ${on_string}: html results" from_work_dir="tophatfusion_out/result.html"/>
     </outputs>
 </tool>