Mercurial > repos > dfornika > mentalist
comparison data_managers/data_manager_conf.xml @ 3:4ea71c8e2db0 draft
planemo upload for repository https://github.com/WGS-TB/MentaLiST/tree/master/galaxy commit f161d96d4d4dcd11a53eeda99595d5fd22891612-dirty
| author | dfornika |
|---|---|
| date | Wed, 11 Apr 2018 14:44:29 -0400 |
| parents | c6a98b93e569 |
| children | af77acce864b |
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| 2:d465e81782a3 | 3:4ea71c8e2db0 |
|---|---|
| 1 <?xml version="1.0"?> | 1 <?xml version="1.0"?> |
| 2 <data_managers> | 2 <data_managers> |
| 3 <data_manager tool_file="data_manager_mentalist_build_db/data_manager/mentalist_build_db.xml" id="mentalist_build_db" version="0.2.2"> | 3 <data_manager tool_file="data_manager_mentalist_build_db/data_manager/mentalist_build_db.xml" id="mentalist_build_db" version="0.1.5"> |
| 4 <data_table name="mentalist_databases"> | 4 <data_table name="mentalist_databases"> |
| 5 <output> | 5 <output> |
| 6 <column name="value" /> | 6 <column name="value" /> |
| 7 <column name="name" /> | 7 <column name="name" /> |
| 8 <column name="path" output_ref="out_file"> | 8 <column name="path" output_ref="out_file"> |
| 13 <value_translation type="function">abspath</value_translation> | 13 <value_translation type="function">abspath</value_translation> |
| 14 </column> | 14 </column> |
| 15 </output> | 15 </output> |
| 16 </data_table> | 16 </data_table> |
| 17 </data_manager> | 17 </data_manager> |
| 18 <data_manager tool_file="data_manager_mentalist_download_cgmlst/data_manager/mentalist_download_cgmlst.xml" id="mentalist_download_cgmlst" version="0.2.2"> | 18 <data_manager tool_file="data_manager_mentalist_download_cgmlst/data_manager/mentalist_download_cgmlst.xml" id="mentalist_download_cgmlst" version="0.1.5"> |
| 19 <data_table name="mentalist_databases"> | 19 <data_table name="mentalist_databases"> |
| 20 <output> | 20 <output> |
| 21 <column name="value" /> | 21 <column name="value" /> |
| 22 <column name="name" /> | 22 <column name="name" /> |
| 23 <column name="path" output_ref="out_file"> | 23 <column name="path" output_ref="out_file"> |
| 28 <value_translation type="function">abspath</value_translation> | 28 <value_translation type="function">abspath</value_translation> |
| 29 </column> | 29 </column> |
| 30 </output> | 30 </output> |
| 31 </data_table> | 31 </data_table> |
| 32 </data_manager> | 32 </data_manager> |
| 33 <data_manager tool_file="data_manager_mentalist_download_pubmlst/data_manager/mentalist_download_pubmlst.xml" id="mentalist_download_pubmlst" version="0.2.2"> | 33 <data_manager tool_file="data_manager_mentalist_download_pubmlst/data_manager/mentalist_download_pubmlst.xml" id="mentalist_download_pubmlst" version="0.1.5"> |
| 34 <data_table name="mentalist_databases"> | 34 <data_table name="mentalist_databases"> |
| 35 <output> | 35 <output> |
| 36 <column name="value" /> | 36 <column name="value" /> |
| 37 <column name="name" /> | 37 <column name="name" /> |
| 38 <column name="path" output_ref="out_file"> | 38 <column name="path" output_ref="out_file"> |
| 43 <value_translation type="function">abspath</value_translation> | 43 <value_translation type="function">abspath</value_translation> |
| 44 </column> | 44 </column> |
| 45 </output> | 45 </output> |
| 46 </data_table> | 46 </data_table> |
| 47 </data_manager> | 47 </data_manager> |
| 48 <data_manager tool_file="data_manager_mentalist_download_enterobase/data_manager/mentalist_download_enterobase.xml" id="mentalist_download_enterobase" version="0.2.2"> | 48 <data_manager tool_file="data_manager_mentalist_download_enterobase/data_manager/mentalist_download_enterobase.xml" id="mentalist_download_enterobase" version="0.1.5"> |
| 49 <data_table name="mentalist_databases"> | 49 <data_table name="mentalist_databases"> |
| 50 <output> | 50 <output> |
| 51 <column name="value" /> | 51 <column name="value" /> |
| 52 <column name="name" /> | 52 <column name="name" /> |
| 53 <column name="path" output_ref="out_file"> | 53 <column name="path" output_ref="out_file"> |