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Full galaxy wrapper
author diego
date Sat, 21 Apr 2012 21:36:15 -0400
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1 <tool id="rtg_cg2sdf" name="Format CG TSV">
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2 <description>to SDF with rtg cg2sdf</description>
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3 <command interpreter="bash">galaxy-rtg-wrapper.sh cg2sdf
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4 $input1
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5 -o ${output.extra_files_path} >$output</command>
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6 <inputs>
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7 <param name="input1" type="data" format="tsvcg" label="Source CG TSV file" help=""/>
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8 </inputs>
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9 <outputs>
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10 <data format="rtg_sdf" name="output" />
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11 </outputs>
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12
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13 <help>
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14 This tool formats a CG TSV file to RTG SDF.
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15 </help>
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17 </tool>