Mercurial > repos > dktanwar > csaw_bioc
comparison meta.yaml @ 1:6b07ed38b117 draft default tip
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author | dktanwar |
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date | Thu, 23 Nov 2017 11:08:52 -0500 |
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0:a8bae0bd3d50 | 1:6b07ed38b117 |
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1 {% set version = "1.12.0" %} | |
2 {% set name = "csaw" %} | |
3 {% set bioc = "3.6" %} | |
4 | |
5 package: | |
6 name: 'bioconductor-{{ name|lower }}' | |
7 version: '{{ version }}' | |
8 source: | |
9 fn: '{{ name }}_{{ version }}.tar.gz' | |
10 url: | |
11 - 'http://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz' | |
12 - 'https://depot.galaxyproject.org/software/{{ name }}/{{ name }}_{{ version }}_src_all.tar.gz' | |
13 sha256: 894cf793f221c0cc2564f1f1c43ca899a7ca6f925e0ba7cd7365388e996d844b | |
14 build: | |
15 number: 0 | |
16 rpaths: | |
17 - lib/R/lib/ | |
18 - lib/ | |
19 requirements: | |
20 build: | |
21 - bioconductor-annotationdbi | |
22 - bioconductor-biocgenerics | |
23 - bioconductor-biocparallel | |
24 - bioconductor-edger | |
25 - bioconductor-genomeinfodb | |
26 - bioconductor-genomicfeatures | |
27 - bioconductor-genomicranges | |
28 - bioconductor-iranges | |
29 - bioconductor-limma | |
30 - bioconductor-rhtslib | |
31 - bioconductor-rsamtools | |
32 - bioconductor-s4vectors | |
33 - 'bioconductor-summarizedexperiment >=1.2.0' | |
34 - r-base | |
35 - r-rcpp | |
36 - gcc # [linux] | |
37 - llvm # [osx] | |
38 run: | |
39 - bioconductor-annotationdbi | |
40 - bioconductor-biocgenerics | |
41 - bioconductor-biocparallel | |
42 - bioconductor-edger | |
43 - bioconductor-genomeinfodb | |
44 - bioconductor-genomicfeatures | |
45 - bioconductor-genomicranges | |
46 - bioconductor-iranges | |
47 - bioconductor-limma | |
48 - bioconductor-rhtslib | |
49 - bioconductor-rsamtools | |
50 - bioconductor-s4vectors | |
51 - 'bioconductor-summarizedexperiment >=1.2.0' | |
52 - r-base | |
53 - r-rcpp | |
54 test: | |
55 commands: | |
56 - '$R -e "library(''{{ name }}'')"' | |
57 about: | |
58 home: 'http://bioconductor.org/packages/{{ bioc }}/bioc/html/{{ name }}.html' | |
59 license: GPL-3 | |
60 summary: 'Detection of differentially bound regions in ChIP-seq data with sliding windows, with methods for normalization and proper FDR control.' |