Mercurial > repos > drosofff > msp_sr_bowtie

annotate test-data/297_reference.fa @ 0:e8bdae1a2bdc draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author drosofff
date Tue, 26 May 2015 18:36:09 -0400
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
1 >FBgn0000005_297
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
2 AGTGACGTATTTGGGTGGTCCAAACCAGCCACTTCCATTATTTCAAAGAAATCAGTAATG
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
3 CACTCTAGTAATTTTCCATAACTGTATCCCAGCTGCGCAGACTCGTTTATCTTTTGCAGC
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
4 GCAGCGTTCTTTGTAAACATCCTAAAGACCTGCCTAAGCAGATTTGACTGCCCTCTTTCA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
5 ACGCTACCTAATCTTAAGAACCCAAGAGCGAGGCTCTCCCGAAATACAAATATTGTTCAA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
6 ATACTGAGGCTTCTCCTCAATCCAATTTGCATTTGATTTTTAGTCTTAAGCTGAGATCCA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
7 AAGAATAAAGTCGTGAAACTATTTCTCCTAAAAACTATTTTTTATTTCTTGGCGTTGTCC
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
8 TTAGTCAACTGACGGGACATTAGTTCGACTCATAAATAAAACAACAATTTTACTGGCGCA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
9 GTCGGTAGGATACAAAAGTATCCGAAAAAAAAGAACCTTCGAATGGAAAATAAGTTAAAT
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
10 TTTATAGTCCTGTGCTCGAAACATCTCCCAAAATAAATTCGTGAAAACTCTTCAACTTCA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
11 ATTATAATTCCAATTCGGTTATCCAATAATAAGTGGAAGTGAAATACGAAACAAAAATAT
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
12 TAAGTCCAAAGGCAACTAAGTTTTAAAACCAACATATAAAAATAAAAAATTAAAACAATA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
13 TAGAATTTTAATAATACAACACAAAAATTTACAAAACAAAAAAACAAACAAGTGAAACTA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
14 GAAAGCTTAAAAATAATAATAACATTGAATCCGAAACAAAACAAAAAAATAAAACACAAA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
15 AGTTAAAAATTTTACAATAAAAATGTCACAACCAATTATTGCGCTGAGCGACATAAACCT
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
16 TGCCGAAGCCCGTCGGCAGCTTAAAGACATTATGCCATTCAAGGGTGATCCAGAAACCCT
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
17 TCACACCTTTATCAGCAGAGTGGATTACGTAATTTCGCTCTACCAAACAAATGATGTCCG
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
18 ACAACAGAGGATTCTACTGGGAGCCATCGAAAGGAACTTGGACGGACAAATTACACGATC
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
19 TTTGGGACTTCCGAACGTCGAAGATTGGCCTACCCTTAAAGCAAGACTCATCGCGGAATT
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
20 TAAAATTCAAACACCAAACTACAAACTTCTGGAGAACTTCAGGGAGACACCATACAGAGG
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
21 AAGCCTAAGAGCATTCTGCGAAGAAGCGGAGAGACGACGTCAATTACTAATTTCGAAACT
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
22 ACACCTGGAAGGTAACCAATCGGATTTTCTTATTTATATTCAGGGTATTAAAGAATCTAT
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
23 TAAGATACTGATAAGGAAACTACCAATACAATTATTCACTATTTTAGCCCATCACGATAT
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
24 TACAGACTTAAGATCCTTAATTACCATTGCACAAAATGAGGGAATTTATGAAGAACACAT
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
25 TAATTTTGAATTTTATGAAAAACCAGAATATCGTAATAAAAATTCAAATTCTAACCAGAA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
26 TTCGAAAACACAAAAATTCAATACAAATGTTCAAACTCAAAATCGACCAAGTTACTCACA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
27 ATATTCCCAACCCTTCCAACCTAATTTTAATCAATACATTCAACCATTTAGACCTAGCTA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
28 TACACAGCAGATAACTAACAACCCACCCATGTGGCACGCACCTAATTATTTCAGACCCAA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
29 CCAATACATAAACCCACAACCCATTATTCAAAAAAATCATTTCCAACAATATCCCAACAA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
30 AGCCCAATTTCCCCAAACAACGCATTTTAGAGGAAATACATACCCTCGACTACAACAACC
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
31 CTCTACATATAAAAATACTAACTTCCCGATTACTAAACGACTAAGACCATCGGACAGTGA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
32 ACAAACTAAAATGTCTATTGACGAAATTAGATTCCAAGACGCGCATGAATTCGAACAAGT
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
33 CCAACCTAATTATTACGAGCAACAGTATTTTAACCAAAATCAATACAATCCGTATCAAAA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
34 TCATAGCTTCATTAATGAAGGGCAACAACAAGTTCAATTTGTACAAATTAATAACAAACA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
35 AAACCAAAATAATTCTGAACTAAACGAAAATTTTCGGTTAACAGTTCCGGAAAATACGAA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
36 TACATAAAAATAGTATACAAAGGGCGTTCATACAAATGCCTTCTAGACACAGGATCAACA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
37 ATTAATATGATCAATGAAAATATATTTTGTCTTCCCATTCAAAATAGTAGATGTGAAGTT
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
38 TTAACATCAAATGGCCCTATTACCTTGAACGACTTGATTATGTTACCCAGAAATAGTATT
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
39 TTCAAAAAAACCGAACCATTTTATGTGCACAGATTTTCTAATAATTACGATATGCTAATT
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
40 GGCAGAAAATTGTTGAAAAATGCTCAATCAGTTATTAATTACAAAAATGATACAGTTACC
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
41 CTTTTTGATCAAACATACAAATTAATTACTTCAGAATCCGAAAGAAACCAAAATTTGTAT
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
42 ATCCAAAGGACACCAGAATCAATTGCAAGCTCAGATCAGGAATCAATAAAAAAATTAGAT
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
43 TTTTCACAGTTTCGATTAGATCACCTAAATCAGGAGGAAACTTTTAAGTTAAAAGGCTTG
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
44 TTAAATAAATTTAGAAATCTTGAATATAAGGAGGGAGAGAAATTAACATTTACAAATACA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
45 ATTAAACACGTACTAAATACAACACATAACTCCCCAATTTATTCGAAACAATACCCACTT
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
46 GCGCAAACACACGAAATCGAAGTAGAAAACCAAGTACAGGAAATGCTGAATCAGGGATTA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
47 ATTAGGGAAAGTAATTCTCCATACAATAGTCCTACTTGGGTCGTACCAAAGAAACCGGAT
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
48 GCTTCTGGTGCAAATAAGTACAGGGTAGTAATTGATTATAGAAAGCTAAATGAAATAACC
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
49 ATACCTGACAGATATCCAATTCCAAATATGGACGAAATTCTTGGCAAACTGGGTAAATGC
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
50 CAATATTTTACAACGATCGATCTGGCAAAGGGATTTCATCAAATAGAAATGGACGAAGAA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
51 TCAATTTCTAAAACTGCATTCTCCACAAAAAGCGGTCATTACGAATACCTTCGAATGCCA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
52 TTTGGCCTTAGGAATGCACCCGCTACTTTTCAAAGGTGCATGAATAATATCCTTCGACCG
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
53 TTGCTTAACAAACACTGTTTGGTGTATCTGGATGATATTATAATTTTTTCAACATCCCTT
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
54 ACAGAACATTTAAATTCAATACAATTAGTTTTTACAAAGCTTGCAGATGCAAATTTAAAA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
55 TTGCAACTAGACAAATGTGAGTTCTTAAAAAAGGAAGCTAACTTTCTTGGTCACATAGTT
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
56 ACCCCTGATGGTATTAAACCAAATCCTATTAAAGTTAAAGCCATAGTTTCATACCCAATT
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
57 CCGACAAAAGATAAAGAGATAAGAGCTTTCCTTGGATTAACAGGTTATTATCGCAAATTT
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
58 ATTCCAAATTACGCAGACATAGCAAAACCCATGACCAGCTGCTTAAAAAAAAGGACAAAG
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
59 ATAGATACACAAAAACTTGAGTACATAGAGGCATTCGAAAAACTTAAGGCTTTGATAATT
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
60 CGTGACCCAATTTTACAATTACCTGATTTTGAAAAGAAATTTGTTTTAACCACAGATGCA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
61 AGTAACTTGGCCCTCGGGGCTGTCCTTTCTCAAAACGGTCATCCTATATCTTTTATTAGT
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
62 AGAACACTTAACGATCACGAATTAAATTACAGTGCTATCGAAAAAGAATTACTTGCCATA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
63 GTTTGGGCCACAAAAACTTTTCGACATTATTTACTAGGACGACAATTTCTCATTGCCAGT
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
64 GACCATCAACCTCTTAGATGGCTTCATAACTTAAAGGAACCAGGTGCTAAGTTAGAAAGA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
65 TGGAGAGTTAGATTAAGCGAATACCAATTTAAAATAGATTATATTAAAGGGAAAGAAAAT
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
66 TCAGTTGCCGATGCATTATCAAGAATTAAAATTGAAGAAAATCATCATAGTGAAGCTACT
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
67 CAACATAGTGCAGAAGAGGACAATAGCAACCTTATTCATTTAACAGAAAAACCAATAAAT
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
68 TATTTCAAAAAACAAATAATCTTTATTAAATCCGATAAAAATAAAGTAGAGCATTCAAAA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
69 ATATTCGGTAACTCCATTACCACAATTCAATATGACGTAATGACACTTGAAAAGGCCAAA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
70 CAAATTTTACTCGATCACTTTATCCATAGAAACATTACCATTTATATTGAGAGCGATGTA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
71 GATTTTGAAATCGTTCAAAGAGCACACATAGAAATTGTTAATACCACCTACACAAAAGTA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
72 ATTCGCAGTCTTTTCCTATTAAAGAACGTTGGTTCATACGCCGAATTCAAAGAAATCATA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
73 CTTCAATCACATGAAAAACTTTTACACCCTGGTATACAGAAAATGACAAAATTATTTAAA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
74 GAAAATCACTTCTTTCCAAATAGCCAACTATTAATTCAGAATATAATAAACGAATGCAAC
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
75 ATATGCAATTTGGCCAAAACAGAACATAGAAACACCAAAATGCCTTTAAAAATCACACCC
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
76 AACCCGGAACATTGCCGAGAAAAATTTGTAGTAGATATTTATTCATCTGAGGGAAAACAT
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
77 TACATCAGTTGCATTGATATTTATTCTAAATTCGCTACACTTGAGCAAATTAAAACTAAG
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
78 GATTGGATAGAATGCAGAAACGCATTAATGCGCATTTTTAATCAACTAGGAAAACCCAAA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
79 TTATTAAAGGCAGACAGAGACGGAGCTTTCTCCAGTTTAGCTTTAAAGCGATGGCTTGAA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
80 GAAGAAGAAGTCGAATTACAGCTCAATACAGCAAAAAACGGAGTAGCAGACGTCGAAAGA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
81 TTACACAAAACAATAAATGAAAAAATTCGTATAATCAATTCATCTGATGATGAAGAAGTA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
82 AAATTAAGCAAGATAGAAACAATCCTCTACACATACAACCAAAAAATTAAACATGACACT
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
83 ACTGGACAGAGACCTGCTCAAATTTTCTTATACGCTGGGCATCCCATATTAGACACTCAA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
84 AAAATTAAAGAGAAGAAAATAGAGAAAATAAATGAAGACAGACGGGAATTTAATATTGAC
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
85 ACTAATTACAGAAAAGGTCCACTACAGAAAGGCAAATTAGAAAACCCATTTAAACCAACC
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
86 AAAAATGTAGAACAGACAGACCCTGACCATTACAAAATCACTAATAGAAATAGAGTTACG
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
87 CACTACTACAAAACACAATTCAAAAAACAAAAGAAAAATAATAAACTCTCAATTTCACAG
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
88 GCACCTGGTACCCGATAACACTATTGTTTATACTGATCACAGCTGTTCATGGACAACAAA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
89 TTCAAATTAATAATATTGACACCAACCACGGATATCTCCTTTTTTCTGATAAGCCAGTAC
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
90 AGATACCATCCTCCTTTGAACATCACTCCTTAAAAATCAATTTAACTGAAATAGACATCG
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
91 TGGTTGACTATTTTGAGCAAAGACTACGAACCGATTACCATGCACCCCAGATCAATTTTT
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
92 TATACAATAAAATAAAAAGAGAACTAGCCAGAATAACCCTGAAACATAGAAACAAACGGG
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
93 GTTTTATTAACATTGTGGGTTCAGGTTTTAAATACCTATTTGGAACACTAGATGAAAATG
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
94 ATCGAGTCGAAATACAGAAAAAACTTGAAATCAACGTCCATAACTCAGTAAAATTACATG
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
95 AACTCAACGACGCCATACGATTGATAAATGACGGAATGCAAAAAATACAGAATTATGAAA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
96 ATAACCACACCATCATTGACAGTCTTTTGTTCGAACTAATGCAGTTTACGGAATACATAG
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
97 AAGATTTGGAAATGGCTATGCAGCTTTCCAGACTTGGACTGTTTAACCCCAAATTACTAA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
98 ACTACGACAAACTTGAAAATGTGAACAGCCAAAACATTTTGAACATTAAAACATCCACTT
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
99 GGATTAACTACAATGATAACCAAGTATTAATCATATCCCACATACCCATTTACCTTTCAC
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
100 TAATAAGCACAATTAAAATAATTCCTTACCCAGACTCCAACGGCTATCAGCTAGATTACA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
101 CAGACACACAATCATATTTTGAAAAAGAAAATAAAGTTTATAATACCGAAAATAAAGAAG
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
102 TAAAAAATGAATGTGTCACCAATATTATTAAACACTTAAATCCAATTTGTAATTTTAAGC
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
103 CAGTACACACGAACGAAATAATAAAATACATAGAACCAAACACAATTGTAACTTGGAACT
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
104 TAACCCAAACAATTCTTAACCAAAATTGCCAAAATTCAATTAATAAAATAAAAATAGAAG
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
105 GAAACAAAATGATAAGAGTAACGCAATGCAAAATAGAAATCAATAATATAAATTTTAGTG
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
106 AAACTCTGTTAGAACCAGAAATAGATTTGACACCACTATACACACCACTTAATATAACAA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
107 AAATAAAAATTGTAAAACACAACGACATTATTGAGATGATTTCAGAGAACAATATTACAC
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
108 TTTACATACAAATGATCATTGTAATAATCGCACTAATTTTGTTGTACTCATATTTAAGAT
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
109 ATGTATCATTTAAACCATTTATGATGTTGTATGCAAAACTTAAAATAAGAAAAAATCAAA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
110 ATCAAAACACACCACAACAAACAGAAATAGAAGAAATTCCATTTCCCACACTATATCCAT
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
111 CAATCCCAGCCCAAGTATAGGCTTCTCTTTAAGGGAAGGGGAGTGACGTATTTGGGTGGT
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
112 CCAAACCAGCCACTTCCATTATTTCAAAGAAATCAGTAATGCACTCTAGTAATTTTCCAT
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
113 AACTGTATCCCAGCTGCGCAGACTCGTTTATCTTTTGCAGCGCAGCGTTCTTTGTAAACA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
114 TCCTAAAGACCTGCCTAAGCAGATTTGACTGCCCTCTTTCAACGCTACCTAATCTTAAGA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
115 ACCCAAGAGCGAGGCTCTCCCGAAATACAAATATTGTTCAAATACTGAGGCTTCTCCTCA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
116 ATCCAATTTGCATTTGATTTTTAGTCTTAAGCTGAGATCCAAAGAATAAAGTCGTGAAAC
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
117 TATTTCTCCTAAAAACTATTTTTTATTTCTTGGCGTTGTCCTTAGTCAACTGACGGGACA
e8bdae1a2bdc Uploaded
drosofff
parents:
diff changeset
118 TTAGTTCGACTCATAAATAAAACAACAATTTTACT