diff test-data/lineage.txt @ 2:03c10736e497 draft

planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 91b634b8f9b131045bbbbf43cc8edbea59ac686b-dirty

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/lineage.txt	Tue Nov 07 11:45:13 2017 -0500
@@ -0,0 +1,62 @@
+Latimeria chalumnae	Metazoa	Chordata	NA	Coelacanthiformes	Coelacanthidae	Latimeria	Latimeria chalumnae
+Xenopus tropicalis	Metazoa	Chordata	Amphibia	Anura	Pipidae	Xenopus	Xenopus tropicalis
+Ornithorhynchus anatinus	Metazoa	Chordata	Mammalia	Monotremata	Ornithorhynchidae	Ornithorhynchus	Ornithorhynchus anatinus
+Macropus eugenii	Metazoa	Chordata	Mammalia	Diprotodontia	Macropodidae	Notamacropus	Notamacropus eugenii
+Sarcophilus harrisii	Metazoa	Chordata	Mammalia	Dasyuromorphia	Dasyuridae	Sarcophilus	Sarcophilus harrisii
+Monodelphis domestica	Metazoa	Chordata	Mammalia	Didelphimorphia	Didelphidae	Monodelphis	Monodelphis domestica
+Echinops telfairi	Metazoa	Chordata	Mammalia	NA	Tenrecidae	Echinops	Echinops telfairi
+Procavia capensis	Metazoa	Chordata	Mammalia	Hyracoidea	Procaviidae	Procavia	Procavia capensis
+Loxodonta africana	Metazoa	Chordata	Mammalia	Proboscidea	Elephantidae	Loxodonta	Loxodonta africana
+Dasypus novemcinctus	Metazoa	Chordata	Mammalia	Cingulata	Dasypodidae	Dasypus	Dasypus novemcinctus
+Choloepus hoffmanni	Metazoa	Chordata	Mammalia	Pilosa	Megalonychidae	Choloepus	Choloepus hoffmanni
+Ochotona princeps	Metazoa	Chordata	Mammalia	Lagomorpha	Ochotonidae	Ochotona	Ochotona princeps
+Oryctolagus cuniculus	Metazoa	Chordata	Mammalia	Lagomorpha	Leporidae	Oryctolagus	Oryctolagus cuniculus
+Cavia porcellus	Metazoa	Chordata	Mammalia	Rodentia	Caviidae	Cavia	Cavia porcellus
+Ictidomys tridecemlineatus	Metazoa	Chordata	Mammalia	Rodentia	Sciuridae	Ictidomys	Ictidomys tridecemlineatus
+Dipodomys ordii	Metazoa	Chordata	Mammalia	Rodentia	Heteromyidae	Dipodomys	Dipodomys ordii
+Rattus norvegicus	Metazoa	Chordata	Mammalia	Rodentia	Muridae	Rattus	Rattus norvegicus
+Mus musculus	Metazoa	Chordata	Mammalia	Rodentia	Muridae	Mus	Mus musculus
+Tupaia belangeri	Metazoa	Chordata	Mammalia	Scandentia	Tupaiidae	Tupaia	Tupaia belangeri
+Otolemur garnettii	Metazoa	Chordata	Mammalia	Primates	Galagidae	Otolemur	Otolemur garnettii
+Microcebus murinus	Metazoa	Chordata	Mammalia	Primates	Cheirogaleidae	Microcebus	Microcebus murinus
+Tarsius syrichta	Metazoa	Chordata	Mammalia	Primates	Tarsiidae	Carlito	Carlito syrichta
+Callithrix jacchus	Metazoa	Chordata	Mammalia	Primates	Cebidae	Callithrix	Callithrix jacchus
+Chlorocebus sabaeus	Metazoa	Chordata	Mammalia	Primates	Cercopithecidae	Chlorocebus	Chlorocebus sabaeus
+Papio anubis	Metazoa	Chordata	Mammalia	Primates	Cercopithecidae	Papio	Papio anubis
+Macaca mulatta	Metazoa	Chordata	Mammalia	Primates	Cercopithecidae	Macaca	Macaca mulatta
+Nomascus leucogenys	Metazoa	Chordata	Mammalia	Primates	Hylobatidae	Nomascus	Nomascus leucogenys
+Pongo abelii	Metazoa	Chordata	Mammalia	Primates	Hominidae	Pongo	Pongo abelii
+Gorilla gorilla gorilla	Metazoa	Chordata	Mammalia	Primates	Hominidae	Gorilla	Gorilla gorilla
+Pan troglodytes	Metazoa	Chordata	Mammalia	Primates	Hominidae	Pan	Pan troglodytes
+Homo sapiens	Metazoa	Chordata	Mammalia	Primates	Hominidae	Homo	Homo sapiens
+Sorex araneus	Metazoa	Chordata	Mammalia	Insectivora	Soricidae	Sorex	Sorex araneus
+Erinaceus europaeus	Metazoa	Chordata	Mammalia	Insectivora	Erinaceidae	Erinaceus	Erinaceus europaeus
+Pteropus vampyrus	Metazoa	Chordata	Mammalia	Chiroptera	Pteropodidae	Pteropus	Pteropus vampyrus
+Myotis lucifugus	Metazoa	Chordata	Mammalia	Chiroptera	Vespertilionidae	Myotis	Myotis lucifugus
+Felis catus	Metazoa	Chordata	Mammalia	Carnivora	Felidae	Felis	Felis catus
+Canis lupus familiaris	Metazoa	Chordata	Mammalia	Carnivora	Canidae	Canis	Canis lupus
+Mustela putorius furo	Metazoa	Chordata	Mammalia	Carnivora	Mustelidae	Mustela	Mustela putorius
+Ailuropoda melanoleuca	Metazoa	Chordata	Mammalia	Carnivora	Ursidae	Ailuropoda	Ailuropoda melanoleuca
+Equus caballus	Metazoa	Chordata	Mammalia	Perissodactyla	Equidae	Equus	Equus caballus
+Vicugna pacos	Metazoa	Chordata	Mammalia	NA	Camelidae	Vicugna	Vicugna pacos
+Sus scrofa	Metazoa	Chordata	Mammalia	NA	Suidae	Sus	Sus scrofa
+Tursiops truncatus	Metazoa	Chordata	Mammalia	Cetacea	Delphinidae	Tursiops	Tursiops truncatus
+Ovis aries	Metazoa	Chordata	Mammalia	NA	Bovidae	Ovis	Ovis aries
+Bos taurus	Metazoa	Chordata	Mammalia	NA	Bovidae	Bos	Bos taurus
+Anolis carolinensis	Metazoa	Chordata	NA	Squamata	Dactyloidae	Anolis	Anolis carolinensis
+Pelodiscus sinensis	Metazoa	Chordata	NA	Testudines	Trionychidae	Pelodiscus	Pelodiscus sinensis
+Taeniopygia guttata	Metazoa	Chordata	Aves	Passeriformes	Estrildidae	Taeniopygia	Taeniopygia guttata
+Ficedula albicollis	Metazoa	Chordata	Aves	Passeriformes	Muscicapidae	Ficedula	Ficedula albicollis
+Anas platyrhynchos	Metazoa	Chordata	Aves	Anseriformes	Anatidae	Anas	Anas platyrhynchos
+Meleagris gallopavo	Metazoa	Chordata	Aves	Galliformes	Phasianidae	Meleagris	Meleagris gallopavo
+Gallus gallus	Metazoa	Chordata	Aves	Galliformes	Phasianidae	Gallus	Gallus gallus
+Lepisosteus oculatus	Metazoa	Chordata	Actinopteri	Semionotiformes	Lepisosteidae	Lepisosteus	Lepisosteus oculatus
+Danio rerio	Metazoa	Chordata	Actinopteri	Cypriniformes	Cyprinidae	Danio	Danio rerio
+Astyanax mexicanus	Metazoa	Chordata	Actinopteri	Characiformes	Characidae	Astyanax	Astyanax mexicanus
+Gadus morhua	Metazoa	Chordata	Actinopteri	Gadiformes	Gadidae	Gadus	Gadus morhua
+Oreochromis niloticus	Metazoa	Chordata	Actinopteri	Cichliformes	Cichlidae	Oreochromis	Oreochromis niloticus
+Poecilia formosa	Metazoa	Chordata	Actinopteri	Cyprinodontiformes	Poeciliidae	Poecilia	Poecilia formosa
+Xiphophorus maculatus	Metazoa	Chordata	Actinopteri	Cyprinodontiformes	Poeciliidae	Xiphophorus	Xiphophorus maculatus
+Gasterosteus aculeatus	Metazoa	Chordata	Actinopteri	Perciformes	Gasterosteidae	Gasterosteus	Gasterosteus aculeatus
+Tetraodon nigroviridis	Metazoa	Chordata	Actinopteri	Tetraodontiformes	Tetraodontidae	Tetraodon	Tetraodon nigroviridis
+Takifugu rubripes	Metazoa	Chordata	Actinopteri	Tetraodontiformes	Tetraodontidae	Takifugu	Takifugu rubripes