Mercurial > repos > earlhaminst > gafa

changeset 7:b9f1bcf5ee59 draft default tip

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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/GAFA/ commit fa875eea77a9471acada2b7b8882a0467994c960
author earlhaminst
date Wed, 25 Apr 2018 10:59:55 -0400
parents c15476d4271c
children
files GAFA.py
diffstat 1 files changed, 3 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/GAFA.py	Tue Mar 20 11:06:51 2018 -0400
+++ b/GAFA.py	Wed Apr 25 10:59:55 2018 -0400
@@ -7,6 +7,7 @@
 import sqlite3
 
 version = "0.3.0"
+compatible_version = ['0.3.0', '0.4.0']
 
 Sequence = collections.namedtuple('Sequence', ['header', 'sequence'])
 
@@ -54,7 +55,7 @@
     cur.execute('SELECT version FROM meta')
     result = cur.fetchone()
     input_meta_version = result[0]
-    if input_meta_version != '0.3.0':
+    if input_meta_version not in compatible_version:
         raise Exception("Incompatible input meta version '%s'" % input_meta_version)
     cur.execute('UPDATE meta SET version=?',
                 (version, ))
@@ -68,6 +69,7 @@
         protein_id VARCHAR KEY NOT NULL REFERENCES transcript(protein_id),
         protein_alignment VARCHAR NOT NULL,
         PRIMARY KEY (gene_family_id, protein_id))''')
+
     conn.commit()