Mercurial > repos > earlhaminst > gff3_to_json

annotate test-data/test.json @ 0:be6cec883b02 draft

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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
author earlhaminst
date Wed, 21 Dec 2016 10:02:59 -0500
parents
children befe6021e476
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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0
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
parents:
diff changeset
1 {
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
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2 "ENSCAFG00000024151": {
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
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3 "Name": "ENSCAFG00000024151",
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
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4 "Transcript": [
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
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5 {
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
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6 "Exon": [
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
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7 {
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
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8 "Name": "ENSCAFE00000180286",
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
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9 "Parent": "ENSCAFT00000026349",
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
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earlhaminst
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11 "id": "ENSCAFE00000180286",
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
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12 "length": 141,
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
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13 "object_type": "Exon",
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
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be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
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15 "species": "canisfamiliaris",
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
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earlhaminst
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17 "strand": 1
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
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18 },
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
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19 {
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
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be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
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21 "Parent": "ENSCAFT00000026349",
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
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be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
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23 "id": "ENSCAFE00000180288",
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
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24 "length": 552,
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
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25 "object_type": "Exon",
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
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be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
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27 "species": "canisfamiliaris",
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
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be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
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29 "strand": 1
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
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30 },
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
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31 {
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be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
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33 "Parent": "ENSCAFT00000026349",
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
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be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
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be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
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be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
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37 "object_type": "Exon",
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
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38 "seq_region_name": "7",
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
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39 "species": "canisfamiliaris",
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
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be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
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41 "strand": 1
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
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42 },
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
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43 {
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
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be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
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45 "Parent": "ENSCAFT00000026349",
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
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earlhaminst
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47 "id": "ENSCAFE00000180319",
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
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earlhaminst
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49 "object_type": "Exon",
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
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be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
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51 "species": "canisfamiliaris",
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
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earlhaminst
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53 "strand": 1
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
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54 },
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
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55 {
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earlhaminst
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57 "Parent": "ENSCAFT00000026349",
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
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earlhaminst
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59 "id": "ENSCAFE00000180337",
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
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earlhaminst
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61 "object_type": "Exon",
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
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62 "seq_region_name": "7",
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
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63 "species": "canisfamiliaris",
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
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66 },
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67 {
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earlhaminst
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77 "strand": 1
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earlhaminst
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78 },
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
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79 {
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1956 "length": 168,
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1961 "strand": 1
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1962 },
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1963 {
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1971 "species": "rattusnorvegicus",
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1973 "strand": 1
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1974 },
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1975 {
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1979 "id": "ENSRNOE00000137211",
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1980 "length": 284,
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1985 "strand": 1
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1986 },
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1987 {
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1991 "id": "ENSRNOE00000136003",
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1992 "length": 137,
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1993 "object_type": "Exon",
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1994 "seq_region_name": "1",
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1995 "species": "rattusnorvegicus",
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1997 "strand": 1
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1998 },
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1999 {
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2000 "Name": "ENSRNOE00000136044",
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2001 "Parent": "ENSRNOT00000019267",
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2003 "id": "ENSRNOE00000136044",
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2004 "length": 160,
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2005 "object_type": "Exon",
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2006 "seq_region_name": "1",
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2009 "strand": 1
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2010 },
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2011 {
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2013 "Parent": "ENSRNOT00000019267",
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2021 "strand": 1
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2022 },
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2023 {
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2030 "seq_region_name": "1",
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2031 "species": "rattusnorvegicus",
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2033 "strand": 1
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2034 },
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2037 "Parent": "ENSRNOT00000019267",
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be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
parents:
diff changeset
2294 "strand": 1
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
parents:
diff changeset
2295 }
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
parents:
diff changeset
2296 ],
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
parents:
diff changeset
2297 "biotype": "protein_coding",
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
parents:
diff changeset
2298 "end": 129206516,
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
parents:
diff changeset
2299 "id": "ENSRNOG00000014187",
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
parents:
diff changeset
2300 "member_id": 0,
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
parents:
diff changeset
2301 "object_type": "Gene",
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
parents:
diff changeset
2302 "seq_region_name": "1",
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
parents:
diff changeset
2303 "species": "rattusnorvegicus",
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
parents:
diff changeset
2304 "start": 128924966,
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
parents:
diff changeset
2305 "strand": 1
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
parents:
diff changeset
2306 }
be6cec883b02 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
earlhaminst
parents:
diff changeset
2307 }