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view test-data/Caenorhabditis_elegans.WBcel235.33.chromosome.I_shortened.json @ 0:be6cec883b02 draft

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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gff3_to_json commit 822c798d43a72724eeab174043fdaafcfdac845f-dirty
author earlhaminst
date Wed, 21 Dec 2016 10:02:59 -0500
parents
children befe6021e476
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{
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      "Name": "nlp-40", 
      "Transcript": [
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                  "object_type": "Exon", 
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                  "species": "caenorhabditiselegans", 
                  "start": 14951, 
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                  "strand": 1
               }
            ], 
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            "Parent": "gene:WBGene00022276", 
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               "CDS": [
                  {
                     "Parent": "transcript:Y74C9A.2a.2", 
                     "end": 11689, 
                     "id": "CDS:Y74C9A.2a.2", 
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                     "strand": 1
                  }, 
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                     "end": 15160, 
                     "id": "CDS:Y74C9A.2a.2", 
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                     "start": 14951, 
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                  }, 
                  {
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                     "end": 16585, 
                     "id": "CDS:Y74C9A.2a.2", 
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                     "strand": 1
                  }
               ], 
               "end": 16585, 
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               "object_type": "Translation", 
               "species": "caenorhabditiselegans", 
               "start": 11641
            }, 
            "biotype": "protein_coding", 
            "end": 16842, 
            "id": "transcript:Y74C9A.2a.2", 
            "object_type": "Transcript", 
            "seq_region_name": "I", 
            "species": "caenorhabditiselegans", 
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            "strand": 1, 
            "transcript_id": "Y74C9A.2a.2"
         }
      ], 
      "biotype": "protein_coding", 
      "description": "Neuropeptide-Like Protein  [Source:RefSeq peptide%3BAcc:NP_001293206]", 
      "end": 16842, 
      "gene_id": "WBGene00022276", 
      "id": "gene:WBGene00022276", 
      "logic_name": "wormbase", 
      "member_id": 0, 
      "object_type": "Gene", 
      "seq_region_name": "I", 
      "species": "caenorhabditiselegans", 
      "start": 10413, 
      "strand": 1
   }, 
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                  "seq_region_name": "I", 
                  "species": "caenorhabditiselegans", 
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                  "strand": -1
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                  "ensembl_end_phase": "0", 
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                  "object_type": "Exon", 
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                  "seq_region_name": "I", 
                  "species": "caenorhabditiselegans", 
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                  "strand": -1
               }, 
               {
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                  "ensembl_end_phase": "1", 
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                  "object_type": "Exon", 
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                  "seq_region_name": "I", 
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                  "strand": -1
               }, 
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                  "ensembl_phase": "1", 
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                  "seq_region_name": "I", 
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                  "ensembl_end_phase": "1", 
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                  "seq_region_name": "I", 
                  "species": "caenorhabditiselegans", 
                  "start": 20848, 
                  "strand": -1
               }, 
               {
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                  "Parent": "transcript:Y74C9A.4d", 
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                  "end": 21136, 
                  "ensembl_end_phase": "1", 
                  "ensembl_phase": "-1", 
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                  "object_type": "Exon", 
                  "rank": "2", 
                  "seq_region_name": "I", 
                  "species": "caenorhabditiselegans", 
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                  "strand": -1
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                  "ensembl_end_phase": "-1", 
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                  "seq_region_name": "I", 
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                  "strand": -1
               }
            ], 
            "Name": "Y74C9A.4d", 
            "Parent": "gene:WBGene00022278", 
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               "CDS": [
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                  {
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                     "strand": -1
                  }, 
                  {
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                  }, 
                  {
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      ], 
      "biotype": "protein_coding", 
      "description": "RCOR (REST CO-Repressor) homolog  [Source:RefSeq peptide%3BAcc:NP_001293207]", 
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      "gene_id": "WBGene00022278", 
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   }
}