Mercurial > repos > earlhaminst > treebest_best
view test-data/dna_alignment.fasta @ 0:4f9e5110914b draft
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/TreeBest commit 136cba2b8c8a2ac2465e7e9420314f2511b991f2-dirty
| author | earlhaminst |
|---|---|
| date | Tue, 20 Dec 2016 16:32:25 -0500 |
| parents | |
| children |
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>ENSLOCT00000017020_lepisosteusoculatus ATGGACAAAGGGCAGAAACCCGAAATTGAGAAGAAAGATGTAATTGTCATTGGGGGTGGT TTATCTGGCTTGTCTGCTGCTAAACTGCTGAAAGAGTCTGGATTGAATGTCCTGGTTCTG GAAGCACGTGATCGTGTGGGTGGGAGAACGTTGACTGTAAAAGGGCCTGAATTCCAATAT GTGGATCTTGGAGGTGCTTATGTTGGTCCAACTCAGAACAGCATTCTGAGACTTGCAAAA GAACTGGGGGTGAAGACTCATTTAGTAAACGAGAAAGAGCGACTCATTCATTATTATAAG GGTAAGACGTATCCATTTCGAGGGCCATTTCCTCCAGCATGGAACCCCATCGTCTACCTG GATTACAACAACCTCTGGAGGACTCTGGACCGAATGGGAAAGGAGATCCCAGCAGATGCT CCATGGACTGCTCAACATGCCACACAGTGGGACAATATGACGATGAAAGAACTAATTGAC AAACATTGCTGGACAAGGACTGCAAAAAACTTTGCAACTCTCTTCGTCAATGTCAATGTG ACCTCTGAACCTCATGAAGTCTCAGCGCTCTGGTTTCTTTGGTATGTGAAGCAGTGTGGA GGGACAAAAAGGATATTTTCAACATCTAATGGAGGACAGGAAAGAAAATTCATGGGGGGA TCAGGGCAGATTAGTGAACGGATCGCAGACCGGCTGAAGGGCAACGTCCACCTAAACCAG CCTGTGATTAAGCTCTTGCAGACTCCAGCTGGTGTGTGTGTCGAAACACTAACTGGAAAT AAGTATGAGGCAGCCTATGCCATCAGTGCTATTCCACCAGGGCTGAGCATGAGTTTGCAT TATGAGCCCCAGCTGCCTCCAGTGAGAAACCAAATGATCCAAAGAGTCCCAATGGGGTCC ATCATTAAATGCATGATGTACTACAAGAGGACCTTCTGGAGAGAGAAGGGGTACTGCGGA ACAATGATGATCGAAGATGAGGACTCTCCCATTTCAATGACCCTAGATGACACCAAACCA GATGGATCGTATCCCTGTATTATGGGGTTTGTTTTAGCAAGAAAAGCAAGAGATCTTATC AATTTGACTAAGGATGAGAGG---AAAAAACGTATCTGTCAGATTTATGCAAAAGTGCTG GGAACAAATGAAGCATTGCATCCTGTTCACTATGAAGAAAAAGACTGGTGTGAAGAACAA TATTCAGGAGGCTGTTATACTGCCTATTTTCCTCCAGGTACCTTCTGCCAGTTCAGCAGA GTTCTAAGGGAGCCTTTTGGTAGGCTCTTCTTCGCAGGCACAGAGACAGCAACCAGATGG AGTGGATATATGGATGGTGCTGTTCAAGCTGGTGAGAGAGCTGGAAGAGAGGTACTGCAT ---GCAATGGGTAAAGTATCCCAGTCAAAAATCTGGAAGGAAGACGTAGAATCACAGGAA GTTCCAGCTGAACCAATTACAACAAGTTTCTTAGAAGAGCATCTGCCTTCTGTCCCTGCA TTTCTGACAATGATCGGAGTCTCTTTTGCATTTATCACAACAGCCGCAGCCCTTGGGTCG GGCATCTTAAAGACAAATTCACGTTTACGTCTCTTTCAT >ENSLACT00000014274_latimeriachalumnae ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------TTTTTTCTTTTTTTCTCCCAG GGTAAGTCGTATCCCTTTAGGGGTCCTTTCCCTCCTATGTGGAACCCCATTGCCTATATG GATTACAACAACCTGTGGAGAACAATGGACGAAATGGGGAAGGAGATCCCCAAGGAAGCC CCGTGGAAGGCCCCACATGCTGAAGAATGGGATAAAATTACCATGAAGGATCTGATTGAC AAAATCTGCTGGACAGGTGTTGCCAAGCAGTTTGCCACGCTGTTTGTGAATGTCAACGTT ACTTCTGAACCCCATGAGGTCTCTGCTCTCTGGTTCCTGTGGTATGTGAAGCAGTGCGGT GGAACGACCAGGATCTTTTCAACAACCAATGGTGGACAGGAGCGTAAGTTTGTTGGCGGT TCAAGCCAGATCAGTGAGAAGATGATGGATCTCCTTGGAGATCAGGTGAAACTGCAGAGA CCTGTAGTCGGCATTGATCAGTCTGGGGAGGATGTGGTCGTGGAGACTCTAAACCGTGAG AAGTATGAGGCCAAATATGTCATTAGTGCCATTCCTCCAACCCTTAGTGTGAAGATTCAC TACAACCCACCTTTGCCGCCTTTGAGAAACCAGTTAATCCATCGTGTTCCTTTGGGATCC GTTATCAAGTGCATGGTGTATTACAAGGACTCATTTTGGAGAAAGCAGGATTACTGTGGC AGCATGATAATTGAAGAAGAGGATGCTCCAATTGGGCTGACACTGGATGACACCAAACCA GATGGCAGTGTGCCTGCCATTATGGGATTCATTCTTGCCCGAAAAGCCAGAAGACTAGCA CATTTCACCAAAGAAGAGCGA---AAGAAGAAAATCTGTGAACTTTATGCAAGAGTTCTT GGATCACAGGAAGCTTTACAGCCTGTACACTATGAAGAGAAGAACTGGTGTGAGGAGGAG TACTCGGGCGGGTGTTACACTGCTTACTTCCCACCAGGAATAATGACCCAGTTTGGCAAG GTAATCCGTCAGCCAGTTGGCAGAATTTTCTTTGCCGGCACTGAGACGGCTACCGAGTGG AGCGGCTACATGGAGGGGGCAGTGCAGGCTGGAGAGAGAGCAGCCAGAGAGATCTTATGT ---TCAATGAGAAGAATTCCTGAAAGTGAAATCTGGAAGCCTGAGCCAGAGTGTCTGGAT GTCCCAGCTTCTCCGATCACCACCGCGTTCTGGGAGAGGAACCTTCCATCTGTCCCTGGG TTTCTGAGGCTGCTTGGATTCTCC---GCGTTTCTCACCTCGACAGCGGCAGTAGGGCTC TTT------GCCTACAAGAGGGGACTGCTGATTAAGAAC >ENSLACT00000009516_latimeriachalumnae ATGTCTGTT------------------GAGAAAAGAGATGTGATCATTGTTGGAGGTGGT CTATCAGGTCTGTCAGCTGCAAAATTGCTAGCAGAGGCGGGGCTGAACGTCTTGGTTCTG GAGGCCAGGAACCGTGTTGGTGGAAGAACGTACACAGTTCAAGGCCCAGAGTTCCAGTAC GTAGACCTTGGGGGAGCATATGTTGGACCCACCCAGAATCGCATACTAAGAGTCGCAAAG GAGTTTGGGGTTAAGACTTACCTGGTAAATGAAAAGGAGCAACTGATTCATTATGTCAAG GGAAAGTCATACCCCTTCCAAGGGCCTTTCCCTCCTGCATGGAACCCAATTGTCTATCTG GATTACAACAATCTCTGGAGGACTTTAGATGAGATGGGACGAGAGATTCCTGCAGAAGCT CCTTGGAAGGCACCCTGTGCTGAAGCGTGGGACAACATGACAATGAAGCAGCTGATTGAT AAACTCTGCTGGACGAGGGTAGCCAAGGACTTTGCAACGCTATTTGTCAACGTGAATGTA ACCTCAGAACCCCATGAAGTCTCTGCTCTCTGGTTTCTCTGGTATGTAAAACAATGTGGA GGAACAAAGAGGATATTTTCAACCACCAATGGCGGGCAGGAGCGGAAGTTTGTTGGCGGC TCTGGGCAGATTAGCGAGCGCATGGCGGACAGATTGAAAGGCCACGTGAAGTTGAACAAG CCAGTGGTGAGAATTCTGCAGAATGACAAATCTGTATGTGTAGAGACCCTGGATGGAGAA AAGTATGAAAGTGCTTATGTCATTAGTGCTGTACCCCCAGCTCTCATTCTGAACATGCAT TTCAGTCCACCATTACCACCTGTGCGGAACCAGCTGATCCAGAGGGTGCCAATGGGGTCT ATTATCAAGTGCATGGTGTATTACAAACGTGCCTTCTGGAGGGAGAATGGCTACTGTGGA ACAATGATGATTGAGGATGAGGCCTCCCCCATCTCTTTGACACTCGATGACACCAAACCA GATGGGTCCTATCCTGCTATCATGGGGTTTATTCTGGCCAGAAAAGCAAGACAGCTGATA AACCTCACTAAAGAGGAGAGAAGGAAAGAGAAAATCTGTCAGATCTATGCCAAAGTACTT GGCACTGATGAAGCTCTCCAGGCTGTTCATTATGAGGAGAAGGACTGGTGTGAGGAGCAG TACTCCGGGGGCTGCTACACCGCTTACTACTCCCCAGGAACGTTCTACCAGTTCAGCAGG TCAGTTCTA--------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------CGT >ENSLACT00000014694_latimeriachalumnae ATGGGCAGC------------------AGCGAGTTCGATGCGATTGTGATTGGAGGTGGC ATCTCAGGTCTGTCGGCCGCCAAGCTGCTGACTGAGTCTGGGCTGAATGTGGTTGTGTTG GAGGCCCGTGACAGGGTTGGAGGAAGAACCTTCACCACCAGGAATAAGCATGTTAAGTAT GTGGACCTTGGCGGAGCCTATGTGGGGCCGACGCAGAATCGCATTCTACGCCTGTCGAAG GAGCTGGGCATTGAGACGTATAAAGTGAATGAAGTGGAGCGCTTCATCCATCACATAAAG GGAAAATCATATCCTTTCCAGGGACCATTCCCTCCAATGTGGAATCCACTTGCCTTCCTG GATTATAATAACCTCTGGAGAACACTGGATGAAATGGGAAAAGAGATCCCCAGGGAAGCC CCGTGGAAGGCCCCACATGCCGAAGAATGGGACAAAATGACCATGAAGGATCTGATTGAC AAAATCTGCTGGACAGAAGCTGCCAAGCAGTTTGCCACGCTGTTTGTGAATGTCAACGTT ACTTCTGAGCCCTGTGAGGTCTCTGCTCTCTGGTTCCTGTGGTACGTGAAGCAGTGCGGT GGAACGACCAGGATCTTTTCAATTGGTAATGGTGGGCAGGAGCGCAAGTTTGTCGGAGGT TCAGGTCAGATCAGTGAGAAGATGATGGAGATCCTTGGAGATCGGGTGAAACTACAGGGA CCTGTAATCAGCATTGATCAGTCCGGAGACGGTGTGGTCGTGGAAACTCTGAACCATGAG AAGTATGAGGCCAAATATGTCATTAGTGCCATTCCCCCATCCCTTAGCATGAAGATTCAT TACAAGCCACCTTTGCCACCAATACGAAACCAGTTTATCTATCGAGTTCCGATTGGATCT GTTATCAAGTGTATGGTCTATTACAAGGAAGCCTTTTGGAAAAAGAAGGATTTCTGTGGC TGTATGATGATTGAAGATGAAGAAGCTCCTATCGGTGTGACTCTGGATGACACCAAGCCC GATGGCACTGTTCCTGCTATTATGGGTTTCATCCTTGCCCGAAAAGCTAGGAGGCTGGCA CATATCACAAAAGAAGAAAGG---AAAACGAAAATCTGTGAACTTTATGCAAGGGTTCTT GGATCAGAGGAAGCTTTACATCCAGTACACTATGAAGAGAAGAACTGGTGCGAGGAGGAG TACTCGGGCGGGTGTTACGCTGCTTACTTCCCACCAGGAATAATGACCCAGTTTGGCAAG GTAATCCGTCAGCCAGTTGGCAGAATTTTCTTTGCTGGCACTGAGACGGCTACCGAGTGG AGCGGCTACATGGAGGGGGCAGTGCAGGCTGGAGAGAGAGCAGCCAGAGAGGTACGGTGC ---AGAAATGTGATC--------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ATAACATACCTACTG >ENSLACT00000014695_latimeriachalumnae ---------------------------------AATTTTCTACTTCTCCAAAGAAACTTT CTTTTAGGTCTGTCGGCCGCCAAGCTGCTGACTGAGTCTGGGCTGAATGTGGTTGTGTTG GAGGCCCGTGACAGGGTTGGAGGAAGAACCTTCACCACCAGGAATAAGCATGTTAAGTAT GTGGACCTTGGCGGAGCCTATGTGGGGCCGACGCAGAATCGCATTCTACGCCTGTCGAAG GAGCTGGGCATTGAGACGTATAAAGTGAATGAAGTGGAGCGCTTCATCCATCACATAAAG GGAAAATCATATCCTTTCCAGGGACCATTCCCTCCAATGTGGAATCCACTTGCCTTCCTG GATTATAATAACCTCTGGAGAACACTGGATGAAATGGGAAAAGAGATCCCCAGGGAAGCC CCGTGGAAGGCCCCACATGCCGAAGAATGGGACAAAATGACCATGAAGGATCTGATTGAC AAAATCTGCTGGACAGAAGCTGCCAAGCAGTTTGCCACGCTGTTTGTGAATGTCAACGTT ACTTCTGAGCCCTGTGAGGTCTCTGCTCTCTGGTTCCTGTGGTACGTGAAGCAGTGCGGT GGAACGACCAGGATCTTTTCAATTGGTAATGGTGGGCAGGAGCGCAAGTTTGTCGGAGGT TCAGGTCAGATCAGTGAGAAGATGATGGAGATCCTTGGAGATCGGGTGAAACTACAGGGA CCTGTAATCAGCATTGATCAGTCCGGAGACGGTGTGGTCGTGGAAACTCTGAACCATGAG AAGTATGAGGCCAAATATGTCATTAGTGCCATTCCCCCATCCCTTAGCATGAAGATTCAT TACAAGCCACCTTTGCCACCAATACGAAACCAGTTTATCTATCGAGTTCCGATTGGATCT GTTATCAAGTGTATGGTCTATTACAAGGAAGCCTTTTGGAAAAAGAAGGATTTCTGTGGC TGTATGATGATTGAAGATGAAGAAGCTCCTATCGGTGTGACTCTGGATGACACCAAGCCC GATGGCACTGTTCCTGCTATTATGGGTTTCATCCTTGCCCGAAAAGCTAGGAGGCTGGCA CATATCACAAAAGAAGAAAGG---AAAACGAAAATCTGTGAACTTTATGCAAGGGTTCTT GGATCAGAGGAAGCTTTACATCCAGTACACTATGAAGAGAAGAACTGGTGCGAGGAGGAG TACTCGGGCGGGTGTTACGCTGCTTACTTCCCACCAGGAATAATGACCCAGTTTGGCAAG GTAATCCGTCAGCCAGTTGGCAGAATTTTCTTTGCTGGCACTGAGACGGCTACCGAGTGG AGCGGCTACATGGAGGGGGCAGTGCAGGCTGGAGAGAGAGCAGCCAGAGAGAGTAGACGC CATGCAGCATCATCAAAGACCAGGGAGAAGCCGGGGGGAACAAAGCCTGACAAACACGAT GTCCCAGCTTCTCCGATCACCACCGCGTTCTGGGAGAGGAACCTTCCATCTGTCCCTGGG TTTCTGAGGCTGCTTGGATTCTCC---GCGTTTCTCACCTCGACAGCGGCAGTAGGGCTC TTT------GCCTACAAGAGGGGACTGCTGATTAAGAAC >ENSLACT00000026689_latimeriachalumnae ATGACCAGC------------------AATAAATATGATGTAATTGTCATTGGAGCAGGC ATCTCAGGTCTGTCGGCTGCCAAGCTGCTGACTGAGTCTGGGCTGAATGTGGTTGTGTTG GAGGCCCGTGACAGGGTTGGAGGAAGAACCTTCACCACCAGGAATAAGCATGTTAAGTAT GTGGACCTTGGCGGAGCCTATGTGGGGCCAACGCAGAATCGCATTCTACGCCTGTCGAAG GAGCTGGGCATTGAGACGTATAAAGTGAATGAAGTGGAACGCCTCATCCATCATGTCAAG GGTAAGTCGTATCCCTTTAGGGGTCCTTTCCCTCCTATGTGGAACCCCATTGCCTATATG GATTACAACAACCTGTGGAGAACAATGGACGAAATGGGGAAGGAGATCCCCAAGGAAGCC CCGTGGAAGGCCCCACATGCTGAAGAATGGGATAAAATTACCATGAAGGATCTGATTGAC AAAATCTGCTGGACAGGTGTTGCCAAGCAGTTTGCCACGCTGTTTGTGAATGTCAACGTT ACTTCTGAACCCCATGAGGTCTCTGCTCTCTGGTTCCTGTGGTATGTGAAGCAGTGCGGT GGAACGACCAGGATCTTTTCAACAACCAATGGTGGACAGGAGCGTAAGTTTGTTGGCGGT TCAAGCCAGATCAGTGAGAAGATGATGGATCTCCTTGGAGATCAGGTGAAACTGCAGAGA CCTGTAGTCGGCATTGATCAGTCTGGGGAGGATGTGGTCGTGGAGACTCTAAACCGTGAG AAGTATGAGGCCAAATATGTCATTAGTGCCATTCCTCCAACCCTTAGTGTGAAGATTCAC TACAACCCACCTTTGCCGCCTTTGAGAAACCAGTTAATCCATCGTGTTCCTTTGGGATCC GTTATCAAGTGCATGGTGTATTACAAGGACTCATTTTGGAGAAAGCAGGATTACTGTGGC AGCATGATAATTGAAGAAGAGGATGCTCCAATTGGGCTGACACTGGATGACACCAAACCA GATGGCAGTGTGCCTGCCATTATGGGATTCATTCTTGCCCGAAAAGCCAGAAGACTAGCA CATTTCACCAAAGAAGAGCGA---AAGAAGAAAATCTGTGAACTTTATGCAAGAGTTCTT GGATCACAGGAAGCTTTACAGCCTGTACACTATGAAGAGAAGAACTGGTGTGAGGAGGAG TACTCGGGCGGGTGTTACACTGCTTACTTCCCACCAGGAATAATGACCCAGTTTGGCAAG GTAATCCGTCAGCCAGTTGGCAGAATTTTCTTTGCCGGCACTGAGACGGCTACCGAGTGG AGCGGCTACATGGAGGGGGCAGTGCAGGCTGGAGAGAGAGCAGCCAGAGAGATCTTATGT ---TCAATGAGAAGAATTCCTGAAAGTGAAATCTGGAAGCCTGAGCCAGAGTGTCTGGAT GTCCCAGCTTCTCCGATCACCACCGCGTTCTGGGAGAGGAACCTTCCATCTGTCCCTGGG TTTCTGAGGCTGCTTGGATTCTCC---GCGTTTCTCACCTCGACAGCGGCAGTAGGGCTC TTT------GCCTACAAGAGGGGACTGCTGATTAAGAAC