Mercurial > repos > earlhaminst > treebest_best
view test-data/dna_alignment.fasta @ 6:bc049ecd9907 draft default tip
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/TreeBest commit b919ef1c37180fb5212122c5a3220c7df9bb1e1f
| author | earlhaminst |
|---|---|
| date | Thu, 07 Mar 2024 15:24:52 +0000 |
| parents | 4f9e5110914b |
| children |
line wrap: on
line source
>ENSLOCT00000017020_lepisosteusoculatus ATGGACAAAGGGCAGAAACCCGAAATTGAGAAGAAAGATGTAATTGTCATTGGGGGTGGT TTATCTGGCTTGTCTGCTGCTAAACTGCTGAAAGAGTCTGGATTGAATGTCCTGGTTCTG GAAGCACGTGATCGTGTGGGTGGGAGAACGTTGACTGTAAAAGGGCCTGAATTCCAATAT GTGGATCTTGGAGGTGCTTATGTTGGTCCAACTCAGAACAGCATTCTGAGACTTGCAAAA GAACTGGGGGTGAAGACTCATTTAGTAAACGAGAAAGAGCGACTCATTCATTATTATAAG GGTAAGACGTATCCATTTCGAGGGCCATTTCCTCCAGCATGGAACCCCATCGTCTACCTG GATTACAACAACCTCTGGAGGACTCTGGACCGAATGGGAAAGGAGATCCCAGCAGATGCT CCATGGACTGCTCAACATGCCACACAGTGGGACAATATGACGATGAAAGAACTAATTGAC AAACATTGCTGGACAAGGACTGCAAAAAACTTTGCAACTCTCTTCGTCAATGTCAATGTG ACCTCTGAACCTCATGAAGTCTCAGCGCTCTGGTTTCTTTGGTATGTGAAGCAGTGTGGA GGGACAAAAAGGATATTTTCAACATCTAATGGAGGACAGGAAAGAAAATTCATGGGGGGA TCAGGGCAGATTAGTGAACGGATCGCAGACCGGCTGAAGGGCAACGTCCACCTAAACCAG CCTGTGATTAAGCTCTTGCAGACTCCAGCTGGTGTGTGTGTCGAAACACTAACTGGAAAT AAGTATGAGGCAGCCTATGCCATCAGTGCTATTCCACCAGGGCTGAGCATGAGTTTGCAT TATGAGCCCCAGCTGCCTCCAGTGAGAAACCAAATGATCCAAAGAGTCCCAATGGGGTCC ATCATTAAATGCATGATGTACTACAAGAGGACCTTCTGGAGAGAGAAGGGGTACTGCGGA ACAATGATGATCGAAGATGAGGACTCTCCCATTTCAATGACCCTAGATGACACCAAACCA GATGGATCGTATCCCTGTATTATGGGGTTTGTTTTAGCAAGAAAAGCAAGAGATCTTATC AATTTGACTAAGGATGAGAGG---AAAAAACGTATCTGTCAGATTTATGCAAAAGTGCTG GGAACAAATGAAGCATTGCATCCTGTTCACTATGAAGAAAAAGACTGGTGTGAAGAACAA TATTCAGGAGGCTGTTATACTGCCTATTTTCCTCCAGGTACCTTCTGCCAGTTCAGCAGA GTTCTAAGGGAGCCTTTTGGTAGGCTCTTCTTCGCAGGCACAGAGACAGCAACCAGATGG AGTGGATATATGGATGGTGCTGTTCAAGCTGGTGAGAGAGCTGGAAGAGAGGTACTGCAT ---GCAATGGGTAAAGTATCCCAGTCAAAAATCTGGAAGGAAGACGTAGAATCACAGGAA GTTCCAGCTGAACCAATTACAACAAGTTTCTTAGAAGAGCATCTGCCTTCTGTCCCTGCA TTTCTGACAATGATCGGAGTCTCTTTTGCATTTATCACAACAGCCGCAGCCCTTGGGTCG GGCATCTTAAAGACAAATTCACGTTTACGTCTCTTTCAT >ENSLACT00000014274_latimeriachalumnae ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------TTTTTTCTTTTTTTCTCCCAG GGTAAGTCGTATCCCTTTAGGGGTCCTTTCCCTCCTATGTGGAACCCCATTGCCTATATG GATTACAACAACCTGTGGAGAACAATGGACGAAATGGGGAAGGAGATCCCCAAGGAAGCC CCGTGGAAGGCCCCACATGCTGAAGAATGGGATAAAATTACCATGAAGGATCTGATTGAC AAAATCTGCTGGACAGGTGTTGCCAAGCAGTTTGCCACGCTGTTTGTGAATGTCAACGTT ACTTCTGAACCCCATGAGGTCTCTGCTCTCTGGTTCCTGTGGTATGTGAAGCAGTGCGGT GGAACGACCAGGATCTTTTCAACAACCAATGGTGGACAGGAGCGTAAGTTTGTTGGCGGT TCAAGCCAGATCAGTGAGAAGATGATGGATCTCCTTGGAGATCAGGTGAAACTGCAGAGA CCTGTAGTCGGCATTGATCAGTCTGGGGAGGATGTGGTCGTGGAGACTCTAAACCGTGAG AAGTATGAGGCCAAATATGTCATTAGTGCCATTCCTCCAACCCTTAGTGTGAAGATTCAC TACAACCCACCTTTGCCGCCTTTGAGAAACCAGTTAATCCATCGTGTTCCTTTGGGATCC GTTATCAAGTGCATGGTGTATTACAAGGACTCATTTTGGAGAAAGCAGGATTACTGTGGC AGCATGATAATTGAAGAAGAGGATGCTCCAATTGGGCTGACACTGGATGACACCAAACCA GATGGCAGTGTGCCTGCCATTATGGGATTCATTCTTGCCCGAAAAGCCAGAAGACTAGCA CATTTCACCAAAGAAGAGCGA---AAGAAGAAAATCTGTGAACTTTATGCAAGAGTTCTT GGATCACAGGAAGCTTTACAGCCTGTACACTATGAAGAGAAGAACTGGTGTGAGGAGGAG TACTCGGGCGGGTGTTACACTGCTTACTTCCCACCAGGAATAATGACCCAGTTTGGCAAG GTAATCCGTCAGCCAGTTGGCAGAATTTTCTTTGCCGGCACTGAGACGGCTACCGAGTGG AGCGGCTACATGGAGGGGGCAGTGCAGGCTGGAGAGAGAGCAGCCAGAGAGATCTTATGT ---TCAATGAGAAGAATTCCTGAAAGTGAAATCTGGAAGCCTGAGCCAGAGTGTCTGGAT GTCCCAGCTTCTCCGATCACCACCGCGTTCTGGGAGAGGAACCTTCCATCTGTCCCTGGG TTTCTGAGGCTGCTTGGATTCTCC---GCGTTTCTCACCTCGACAGCGGCAGTAGGGCTC TTT------GCCTACAAGAGGGGACTGCTGATTAAGAAC >ENSLACT00000009516_latimeriachalumnae ATGTCTGTT------------------GAGAAAAGAGATGTGATCATTGTTGGAGGTGGT CTATCAGGTCTGTCAGCTGCAAAATTGCTAGCAGAGGCGGGGCTGAACGTCTTGGTTCTG GAGGCCAGGAACCGTGTTGGTGGAAGAACGTACACAGTTCAAGGCCCAGAGTTCCAGTAC GTAGACCTTGGGGGAGCATATGTTGGACCCACCCAGAATCGCATACTAAGAGTCGCAAAG GAGTTTGGGGTTAAGACTTACCTGGTAAATGAAAAGGAGCAACTGATTCATTATGTCAAG GGAAAGTCATACCCCTTCCAAGGGCCTTTCCCTCCTGCATGGAACCCAATTGTCTATCTG GATTACAACAATCTCTGGAGGACTTTAGATGAGATGGGACGAGAGATTCCTGCAGAAGCT CCTTGGAAGGCACCCTGTGCTGAAGCGTGGGACAACATGACAATGAAGCAGCTGATTGAT AAACTCTGCTGGACGAGGGTAGCCAAGGACTTTGCAACGCTATTTGTCAACGTGAATGTA ACCTCAGAACCCCATGAAGTCTCTGCTCTCTGGTTTCTCTGGTATGTAAAACAATGTGGA GGAACAAAGAGGATATTTTCAACCACCAATGGCGGGCAGGAGCGGAAGTTTGTTGGCGGC TCTGGGCAGATTAGCGAGCGCATGGCGGACAGATTGAAAGGCCACGTGAAGTTGAACAAG CCAGTGGTGAGAATTCTGCAGAATGACAAATCTGTATGTGTAGAGACCCTGGATGGAGAA AAGTATGAAAGTGCTTATGTCATTAGTGCTGTACCCCCAGCTCTCATTCTGAACATGCAT TTCAGTCCACCATTACCACCTGTGCGGAACCAGCTGATCCAGAGGGTGCCAATGGGGTCT ATTATCAAGTGCATGGTGTATTACAAACGTGCCTTCTGGAGGGAGAATGGCTACTGTGGA ACAATGATGATTGAGGATGAGGCCTCCCCCATCTCTTTGACACTCGATGACACCAAACCA GATGGGTCCTATCCTGCTATCATGGGGTTTATTCTGGCCAGAAAAGCAAGACAGCTGATA AACCTCACTAAAGAGGAGAGAAGGAAAGAGAAAATCTGTCAGATCTATGCCAAAGTACTT GGCACTGATGAAGCTCTCCAGGCTGTTCATTATGAGGAGAAGGACTGGTGTGAGGAGCAG TACTCCGGGGGCTGCTACACCGCTTACTACTCCCCAGGAACGTTCTACCAGTTCAGCAGG TCAGTTCTA--------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------CGT >ENSLACT00000014694_latimeriachalumnae ATGGGCAGC------------------AGCGAGTTCGATGCGATTGTGATTGGAGGTGGC ATCTCAGGTCTGTCGGCCGCCAAGCTGCTGACTGAGTCTGGGCTGAATGTGGTTGTGTTG GAGGCCCGTGACAGGGTTGGAGGAAGAACCTTCACCACCAGGAATAAGCATGTTAAGTAT GTGGACCTTGGCGGAGCCTATGTGGGGCCGACGCAGAATCGCATTCTACGCCTGTCGAAG GAGCTGGGCATTGAGACGTATAAAGTGAATGAAGTGGAGCGCTTCATCCATCACATAAAG GGAAAATCATATCCTTTCCAGGGACCATTCCCTCCAATGTGGAATCCACTTGCCTTCCTG GATTATAATAACCTCTGGAGAACACTGGATGAAATGGGAAAAGAGATCCCCAGGGAAGCC CCGTGGAAGGCCCCACATGCCGAAGAATGGGACAAAATGACCATGAAGGATCTGATTGAC AAAATCTGCTGGACAGAAGCTGCCAAGCAGTTTGCCACGCTGTTTGTGAATGTCAACGTT ACTTCTGAGCCCTGTGAGGTCTCTGCTCTCTGGTTCCTGTGGTACGTGAAGCAGTGCGGT GGAACGACCAGGATCTTTTCAATTGGTAATGGTGGGCAGGAGCGCAAGTTTGTCGGAGGT TCAGGTCAGATCAGTGAGAAGATGATGGAGATCCTTGGAGATCGGGTGAAACTACAGGGA CCTGTAATCAGCATTGATCAGTCCGGAGACGGTGTGGTCGTGGAAACTCTGAACCATGAG AAGTATGAGGCCAAATATGTCATTAGTGCCATTCCCCCATCCCTTAGCATGAAGATTCAT TACAAGCCACCTTTGCCACCAATACGAAACCAGTTTATCTATCGAGTTCCGATTGGATCT GTTATCAAGTGTATGGTCTATTACAAGGAAGCCTTTTGGAAAAAGAAGGATTTCTGTGGC TGTATGATGATTGAAGATGAAGAAGCTCCTATCGGTGTGACTCTGGATGACACCAAGCCC GATGGCACTGTTCCTGCTATTATGGGTTTCATCCTTGCCCGAAAAGCTAGGAGGCTGGCA CATATCACAAAAGAAGAAAGG---AAAACGAAAATCTGTGAACTTTATGCAAGGGTTCTT GGATCAGAGGAAGCTTTACATCCAGTACACTATGAAGAGAAGAACTGGTGCGAGGAGGAG TACTCGGGCGGGTGTTACGCTGCTTACTTCCCACCAGGAATAATGACCCAGTTTGGCAAG GTAATCCGTCAGCCAGTTGGCAGAATTTTCTTTGCTGGCACTGAGACGGCTACCGAGTGG AGCGGCTACATGGAGGGGGCAGTGCAGGCTGGAGAGAGAGCAGCCAGAGAGGTACGGTGC ---AGAAATGTGATC--------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------ATAACATACCTACTG >ENSLACT00000014695_latimeriachalumnae ---------------------------------AATTTTCTACTTCTCCAAAGAAACTTT CTTTTAGGTCTGTCGGCCGCCAAGCTGCTGACTGAGTCTGGGCTGAATGTGGTTGTGTTG GAGGCCCGTGACAGGGTTGGAGGAAGAACCTTCACCACCAGGAATAAGCATGTTAAGTAT GTGGACCTTGGCGGAGCCTATGTGGGGCCGACGCAGAATCGCATTCTACGCCTGTCGAAG GAGCTGGGCATTGAGACGTATAAAGTGAATGAAGTGGAGCGCTTCATCCATCACATAAAG GGAAAATCATATCCTTTCCAGGGACCATTCCCTCCAATGTGGAATCCACTTGCCTTCCTG GATTATAATAACCTCTGGAGAACACTGGATGAAATGGGAAAAGAGATCCCCAGGGAAGCC CCGTGGAAGGCCCCACATGCCGAAGAATGGGACAAAATGACCATGAAGGATCTGATTGAC AAAATCTGCTGGACAGAAGCTGCCAAGCAGTTTGCCACGCTGTTTGTGAATGTCAACGTT ACTTCTGAGCCCTGTGAGGTCTCTGCTCTCTGGTTCCTGTGGTACGTGAAGCAGTGCGGT GGAACGACCAGGATCTTTTCAATTGGTAATGGTGGGCAGGAGCGCAAGTTTGTCGGAGGT TCAGGTCAGATCAGTGAGAAGATGATGGAGATCCTTGGAGATCGGGTGAAACTACAGGGA CCTGTAATCAGCATTGATCAGTCCGGAGACGGTGTGGTCGTGGAAACTCTGAACCATGAG AAGTATGAGGCCAAATATGTCATTAGTGCCATTCCCCCATCCCTTAGCATGAAGATTCAT TACAAGCCACCTTTGCCACCAATACGAAACCAGTTTATCTATCGAGTTCCGATTGGATCT GTTATCAAGTGTATGGTCTATTACAAGGAAGCCTTTTGGAAAAAGAAGGATTTCTGTGGC TGTATGATGATTGAAGATGAAGAAGCTCCTATCGGTGTGACTCTGGATGACACCAAGCCC GATGGCACTGTTCCTGCTATTATGGGTTTCATCCTTGCCCGAAAAGCTAGGAGGCTGGCA CATATCACAAAAGAAGAAAGG---AAAACGAAAATCTGTGAACTTTATGCAAGGGTTCTT GGATCAGAGGAAGCTTTACATCCAGTACACTATGAAGAGAAGAACTGGTGCGAGGAGGAG TACTCGGGCGGGTGTTACGCTGCTTACTTCCCACCAGGAATAATGACCCAGTTTGGCAAG GTAATCCGTCAGCCAGTTGGCAGAATTTTCTTTGCTGGCACTGAGACGGCTACCGAGTGG AGCGGCTACATGGAGGGGGCAGTGCAGGCTGGAGAGAGAGCAGCCAGAGAGAGTAGACGC CATGCAGCATCATCAAAGACCAGGGAGAAGCCGGGGGGAACAAAGCCTGACAAACACGAT GTCCCAGCTTCTCCGATCACCACCGCGTTCTGGGAGAGGAACCTTCCATCTGTCCCTGGG TTTCTGAGGCTGCTTGGATTCTCC---GCGTTTCTCACCTCGACAGCGGCAGTAGGGCTC TTT------GCCTACAAGAGGGGACTGCTGATTAAGAAC >ENSLACT00000026689_latimeriachalumnae ATGACCAGC------------------AATAAATATGATGTAATTGTCATTGGAGCAGGC ATCTCAGGTCTGTCGGCTGCCAAGCTGCTGACTGAGTCTGGGCTGAATGTGGTTGTGTTG GAGGCCCGTGACAGGGTTGGAGGAAGAACCTTCACCACCAGGAATAAGCATGTTAAGTAT GTGGACCTTGGCGGAGCCTATGTGGGGCCAACGCAGAATCGCATTCTACGCCTGTCGAAG GAGCTGGGCATTGAGACGTATAAAGTGAATGAAGTGGAACGCCTCATCCATCATGTCAAG GGTAAGTCGTATCCCTTTAGGGGTCCTTTCCCTCCTATGTGGAACCCCATTGCCTATATG GATTACAACAACCTGTGGAGAACAATGGACGAAATGGGGAAGGAGATCCCCAAGGAAGCC CCGTGGAAGGCCCCACATGCTGAAGAATGGGATAAAATTACCATGAAGGATCTGATTGAC AAAATCTGCTGGACAGGTGTTGCCAAGCAGTTTGCCACGCTGTTTGTGAATGTCAACGTT ACTTCTGAACCCCATGAGGTCTCTGCTCTCTGGTTCCTGTGGTATGTGAAGCAGTGCGGT GGAACGACCAGGATCTTTTCAACAACCAATGGTGGACAGGAGCGTAAGTTTGTTGGCGGT TCAAGCCAGATCAGTGAGAAGATGATGGATCTCCTTGGAGATCAGGTGAAACTGCAGAGA CCTGTAGTCGGCATTGATCAGTCTGGGGAGGATGTGGTCGTGGAGACTCTAAACCGTGAG AAGTATGAGGCCAAATATGTCATTAGTGCCATTCCTCCAACCCTTAGTGTGAAGATTCAC TACAACCCACCTTTGCCGCCTTTGAGAAACCAGTTAATCCATCGTGTTCCTTTGGGATCC GTTATCAAGTGCATGGTGTATTACAAGGACTCATTTTGGAGAAAGCAGGATTACTGTGGC AGCATGATAATTGAAGAAGAGGATGCTCCAATTGGGCTGACACTGGATGACACCAAACCA GATGGCAGTGTGCCTGCCATTATGGGATTCATTCTTGCCCGAAAAGCCAGAAGACTAGCA CATTTCACCAAAGAAGAGCGA---AAGAAGAAAATCTGTGAACTTTATGCAAGAGTTCTT GGATCACAGGAAGCTTTACAGCCTGTACACTATGAAGAGAAGAACTGGTGTGAGGAGGAG TACTCGGGCGGGTGTTACACTGCTTACTTCCCACCAGGAATAATGACCCAGTTTGGCAAG GTAATCCGTCAGCCAGTTGGCAGAATTTTCTTTGCCGGCACTGAGACGGCTACCGAGTGG AGCGGCTACATGGAGGGGGCAGTGCAGGCTGGAGAGAGAGCAGCCAGAGAGATCTTATGT ---TCAATGAGAAGAATTCCTGAAAGTGAAATCTGGAAGCCTGAGCCAGAGTGTCTGGAT GTCCCAGCTTCTCCGATCACCACCGCGTTCTGGGAGAGGAACCTTCCATCTGTCCCTGGG TTTCTGAGGCTGCTTGGATTCTCC---GCGTTTCTCACCTCGACAGCGGCAGTAGGGCTC TTT------GCCTACAAGAGGGGACTGCTGATTAAGAAC