Mercurial > repos > ebi-gxa > dropletutils_read_10x
comparison dropletutils-read-10x.xml @ 4:d552332dff6d draft
"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/ commit 1e30db4863e946769c3d90147b3144ca0a4655dd"
| author | ebi-gxa |
|---|---|
| date | Mon, 06 Jul 2020 10:52:50 -0400 |
| parents | 058a41379291 |
| children | 3dd08eb96cf6 |
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| 3:058a41379291 | 4:d552332dff6d |
|---|---|
| 12 dropletutils-read-10x-counts.R | 12 dropletutils-read-10x-counts.R |
| 13 -s . | 13 -s . |
| 14 -c TRUE | 14 -c TRUE |
| 15 -o '${output_rds}' | 15 -o '${output_rds}' |
| 16 | 16 |
| 17 #if $add_metadata_file | 17 #if $add_metadata.add_metadata_file |
| 18 --metadata-files "${metadata_files}" | 18 --metadata-files "${add_metadata.metadata_files}" |
| 19 --cell-id-column "${cell_id_column}" | 19 --cell-id-column "${add_metadata.cell_id_column}" |
| 20 #end if | 20 #end if |
| 21 | |
| 22 | 21 |
| 23 ]]></command> | 22 ]]></command> |
| 24 | 23 |
| 25 <inputs> | 24 <inputs> |
| 26 <param name="matrix" type="data" format="txt" label="Expression matrix in sparse matrix format (.mtx)"/> | 25 <param name="matrix" type="data" format="txt" label="Expression matrix in sparse matrix format (.mtx)"/> |