Mercurial > repos > ebi-gxa > garnett_get_std_output

diff garnett_get_std_output.xml @ 1:1023eae1b147 draft

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"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/ commit 241c850301f8094f6aa0016e2335a8b550c29aed"
author ebi-gxa
date Fri, 24 Apr 2020 11:22:22 -0400
parents 40b587883bd9
children 5f05e2901299
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--- a/garnett_get_std_output.xml	Wed Apr 08 06:25:07 2020 -0400
+++ b/garnett_get_std_output.xml	Fri Apr 24 11:22:22 2020 -0400
@@ -5,10 +5,11 @@
     </macros>
     <expand macro="requirements" />
     <command detect_errors="exit_code"><![CDATA[
-        garnett_get_std_output.R --input-object '${input_object}' --output-file-path '${output_file_path}'
+        garnett_get_std_output.R --input-object '${input_object}' --classifier '${classifier}' --output-file-path '${output_file_path}'
     ]]></command>
     <inputs>
         <param type="data" name="input_object" label="input CDS object" format="rdata" help="CDS object with predicted labels" />
+        <param type="data" name="classifier" label="classifier object" format="rdata" help="Classifier object in rdata format" />
     </inputs>
     <outputs>
         <data name="output_file_path" format="txt" />