Mercurial > repos > ebi-gxa > gtf2gene_list

comparison gtf2featureAnnotation.xml @ 5:00ee933b08fd draft

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planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/tree/develop/tools/util/.shed.yml commit 2d7ec5b8aa6d292cbb4a1b60efd1d98ff23263ba
author ebi-gxa
date Fri, 01 Nov 2019 09:44:26 -0400
parents b6354c917ef9
children 1a642de6db01
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4:b6354c917ef9 5:00ee933b08fd
1 <tool id="_ensembl_gtf2gene_list" name="GTF2GeneList" version="1.42.1+galaxy4"> 1 <tool id="_ensembl_gtf2gene_list" name="GTF2GeneList" version="1.42.1+galaxy5">
2 <description>extracts a complete annotation table or subsets thereof from an Ensembl GTF using rtracklayer</description> 2 <description>extracts a complete annotation table or subsets thereof from an Ensembl GTF using rtracklayer</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="1.42.1">bioconductor-rtracklayer</requirement> 4 <requirement type="package" version="1.42.1">bioconductor-rtracklayer</requirement>
5 <requirement type="package">bioconductor-biostrings</requirement> 5 <requirement type="package">bioconductor-biostrings</requirement>
6 <requirement type="package">r-optparse</requirement> 6 <requirement type="package">r-optparse</requirement>