Mercurial > repos > ebi-gxa > gtf2gene_list

comparison gtf2featureAnnotation.xml @ 2:e255c0e5dfca draft

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planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/tree/develop/tools/util/.shed.yml commit 194d2e0af16624c9a3d1af92f7b3686d2e0ee552-dirty
author ebi-gxa
date Fri, 18 Oct 2019 11:00:04 -0400
parents 247b439a78f7
children b95e6a9bb15c
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1:247b439a78f7 2:e255c0e5dfca
1 <tool id="_ensembl_gtf2gene_list" name="GTF2GeneAnnotationTable" version="1.42.1+galaxy1"> 1 <tool id="_ensembl_gtf2gene_list" name="GTF2GeneList" version="1.42.1+galaxy2">
2 <description>extracts a complete annotation table or subsets thereof from an Ensembl GTF using rtracklayer</description> 2 <description>extracts a complete annotation table or subsets thereof from an Ensembl GTF using rtracklayer</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="1.42.1">bioconductor-rtracklayer</requirement> 4 <requirement type="package" version="1.42.1">bioconductor-rtracklayer</requirement>
5 <requirement type="package">bioconductor-biostrings</requirement> 5 <requirement type="package">bioconductor-biostrings</requirement>
6 <requirement type="package">r-optparse</requirement> 6 <requirement type="package">r-optparse</requirement>