changeset 4:016c39d243fb draft

"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/ commit c388aa3bb719eff471508b6f01cae8583ee7bb1d"
author ebi-gxa
date Thu, 14 May 2020 17:30:05 -0400
parents ef2dc754709c
children 91980addce5e
files monocle3-macros.xml monocle3-plotCells.xml
diffstat 2 files changed, 5 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/monocle3-macros.xml	Tue Apr 28 12:34:59 2020 -0400
+++ b/monocle3-macros.xml	Thu May 14 17:30:05 2020 -0400
@@ -4,6 +4,7 @@
   <token name="@HELP@">More information can be found at https://cole-trapnell-lab.github.io/monocle3/ and https://github.com/ebi-gene-expression-group/monocle-scripts</token>
   <token name="@VERSION_HISTORY@"><![CDATA[
 **Version history**
+0.1.5+galaxy0: Updated to monocle3-cli 0.0.8 to add top marker genes and fix container plots for plotCells (only those two modules upgraded).
 
 0.1.4+galaxy0: Updated to monocle3-cli 0.0.7 to fix bug with column headers in tsv.
 
--- a/monocle3-plotCells.xml	Tue Apr 28 12:34:59 2020 -0400
+++ b/monocle3-plotCells.xml	Thu May 14 17:30:05 2020 -0400
@@ -1,10 +1,12 @@
 <?xml version="1.0" encoding="utf-8"?>
-<tool id="monocle3_plotCells" name="Monocle3 plotCells" version="@TOOL_VERSION@+galaxy0" profile="@PROFILE@">
+<tool id="monocle3_plotCells" name="Monocle3 plotCells" version="0.1.5+galaxy0" profile="@PROFILE@">
   <description> in the reduced dimensionality space</description>
   <macros>
     <import>monocle3-macros.xml</import>
   </macros>
-  <expand macro="requirements"/>
+  <requirements>
+    <requirement type="package" version="0.0.8">monocle3-cli</requirement>
+  </requirements>
   <command detect_errors="exit_code"><![CDATA[
 LANG=en_US.UTF-8 monocle3 plotCells
     --reduction-method '$(reduction_method)'