Mercurial > repos > ebi-gxa > scanpy_filter_cells
comparison scanpy-filter-cells.xml @ 7:9c65f1de489b draft
planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/tree/develop/tools/tertiary-analysis/scanpy commit 400799f99ee36ad12b990b1ccabf4be16a26c003
author | ebi-gxa |
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date | Mon, 25 Nov 2019 14:41:57 -0500 |
parents | 9024cf7a9a13 |
children | 8d97bee137b5 |
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6:9024cf7a9a13 | 7:9c65f1de489b |
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1 <?xml version="1.0" encoding="utf-8"?> | 1 <?xml version="1.0" encoding="utf-8"?> |
2 <tool id="scanpy_filter_cells" name="Scanpy FilterCells" version="@TOOL_VERSION@+galaxy3"> | 2 <tool id="scanpy_filter_cells" name="Scanpy FilterCells" version="@TOOL_VERSION@+galaxy6"> |
3 <description>based on counts and numbers of genes expressed</description> | 3 <description>based on counts and numbers of genes expressed</description> |
4 <macros> | 4 <macros> |
5 <import>scanpy_macros2.xml</import> | 5 <import>scanpy_macros2.xml</import> |
6 </macros> | 6 </macros> |
7 <expand macro="requirements"/> | 7 <expand macro="requirements"/> |
57 </repeat> | 57 </repeat> |
58 <expand macro="export_mtx_params"/> | 58 <expand macro="export_mtx_params"/> |
59 </inputs> | 59 </inputs> |
60 | 60 |
61 <outputs> | 61 <outputs> |
62 <data name="output_h5" format="h5" from_work_dir="output.h5" label="${tool.name} on ${on_string}: Filtered cells"/> | 62 <expand macro="output_data_obj" description="Filtered cells"/> |
63 <expand macro="export_mtx_outputs"/> | 63 <expand macro="export_mtx_outputs"/> |
64 </outputs> | 64 </outputs> |
65 | 65 |
66 <tests> | 66 <tests> |
67 <test> | 67 <test> |