Mercurial > repos > ebi-gxa > scanpy_find_markers
comparison scanpy-find-markers.xml @ 20:615a46c220f0 draft
"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/tree/develop/tools/tertiary-analysis/scanpy commit dc04b063913e5d8ae360b51b62adde47bc1ddac7-dirty"
| author | ebi-gxa |
|---|---|
| date | Mon, 22 Mar 2021 14:37:35 +0000 |
| parents | bfdca1eb4548 |
| children | a6a896082cd7 |
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| 19:9fe7e2da8fe6 | 20:615a46c220f0 |
|---|---|
| 31 #if $settings.groups | 31 #if $settings.groups |
| 32 --groups '${settings.groups}' | 32 --groups '${settings.groups}' |
| 33 #end if | 33 #end if |
| 34 --reference '${settings.reference}' | 34 --reference '${settings.reference}' |
| 35 --filter-params 'min_in_group_fraction:${settings.min_in_group_fraction},max_out_group_fraction:${settings.max_out_group_fraction},min_fold_change:${settings.min_fold_change}' | 35 --filter-params 'min_in_group_fraction:${settings.min_in_group_fraction},max_out_group_fraction:${settings.max_out_group_fraction},min_fold_change:${settings.min_fold_change}' |
| 36 $settings.pts $settings.tie_correct | |
| 36 #end if | 37 #end if |
| 37 $settings.pts $settings.tie_correct | |
| 38 @INPUT_OPTS@ | 38 @INPUT_OPTS@ |
| 39 @OUTPUT_OPTS@ | 39 @OUTPUT_OPTS@ |
| 40 ]]></command> | 40 ]]></command> |
| 41 | 41 |
| 42 <inputs> | 42 <inputs> |