Mercurial > repos > ebi-gxa > scanpy_integrate_mnn

comparison scanpy_macros2.xml @ 7:4951ff9f43db draft

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"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/tree/develop/tools/tertiary-analysis/scanpy commit 3365d5d4f7930e736fa6814df36d68e578d45d46-dirty"
author ebi-gxa
date Thu, 22 Jul 2021 20:51:52 +0000
parents 5bb009f95e03
children 9a2f72d7dbd2
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6:5bb009f95e03 7:4951ff9f43db
1 <macros> 1 <macros>
2 <token name="@TOOL_VERSION@">1.7.2</token> 2 <token name="@TOOL_VERSION@">1.8.1</token>
3 <token name="@HELP@">More information can be found at https://scanpy.readthedocs.io</token> 3 <token name="@HELP@">More information can be found at https://scanpy.readthedocs.io</token>
4 <token name="@PROFILE@">18.01</token> 4 <token name="@PROFILE@">18.01</token>
5 <token name="@VERSION_HISTORY@"><![CDATA[ 5 <token name="@VERSION_HISTORY@"><![CDATA[
6 **Version history** 6 **Version history**
7
8 1.8.1+galaxy0: Upate to scanpy-scripts 1.0.1 (running scanpy ==1.8.1), including Scrublet integration.
7 9
8 1.7.2+galaxy0: Upate to scanpy-scripts 0.3.3 (running scanpy ==1.7.2) to incorporate fix for object output from PAGA plotting, to allow PAGA init of FDG. 10 1.7.2+galaxy0: Upate to scanpy-scripts 0.3.3 (running scanpy ==1.7.2) to incorporate fix for object output from PAGA plotting, to allow PAGA init of FDG.
9 11
10 1.6.0+galaxy0: Update to scanpy-scripts 0.2.13 (running scanpy ==1.6.0) to incorporate new options, code simplifications, and batch integration methods. Jonathan Manning, Expression Atlas team https://www.ebi.ac.uk/gxa/home at 12 1.6.0+galaxy0: Update to scanpy-scripts 0.2.13 (running scanpy ==1.6.0) to incorporate new options, code simplifications, and batch integration methods. Jonathan Manning, Expression Atlas team https://www.ebi.ac.uk/gxa/home at
11 EMBL-EBI https://www.ebi.ac.uk/ 13 EMBL-EBI https://www.ebi.ac.uk/
57 </token> 59 </token>
58 <token name="@EXPORT_MTX_OPTS@">${export_mtx}</token> 60 <token name="@EXPORT_MTX_OPTS@">${export_mtx}</token>
59 61
60 <xml name="requirements"> 62 <xml name="requirements">
61 <requirements> 63 <requirements>
62 <requirement type="package" version="0.4.0">scanpy-scripts</requirement> 64 <requirement type="package" version="1.1.0">scanpy-scripts</requirement>
63 <yield/> 65 <yield/>
64 </requirements> 66 </requirements>
65 </xml> 67 </xml>
66 68
67 <xml name="citations"> 69 <xml name="citations">