Mercurial > repos > ebi-gxa > scanpy_normalise_data
comparison scanpy-normalise-data.xml @ 3:378ea34bbf2a draft
planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/tree/develop/tools/tertiary-analysis/scanpy commit d13a0a5fceabe51e1a6fe763767b963623aa295a
| author | ebi-gxa |
|---|---|
| date | Mon, 28 Oct 2019 05:22:50 -0400 |
| parents | 059f8d2e8be1 |
| children | f7322b68cc90 |
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| 2:059f8d2e8be1 | 3:378ea34bbf2a |
|---|---|
| 1 <?xml version="1.0" encoding="utf-8"?> | 1 <?xml version="1.0" encoding="utf-8"?> |
| 2 <tool id="scanpy_normalise_data" name="Scanpy NormaliseData" version="@TOOL_VERSION@+galaxy1"> | 2 <tool id="scanpy_normalise_data" name="Scanpy NormaliseData" version="@TOOL_VERSION@+galaxy2"> |
| 3 <description>to make all cells having the same total expression</description> | 3 <description>to make all cells having the same total expression</description> |
| 4 <macros> | 4 <macros> |
| 5 <import>scanpy_macros2.xml</import> | 5 <import>scanpy_macros2.xml</import> |
| 6 </macros> | 6 </macros> |
| 7 <expand macro="requirements"/> | 7 <expand macro="requirements"/> |
| 12 --fraction ${fraction} | 12 --fraction ${fraction} |
| 13 --save-raw ${save_raw} | 13 --save-raw ${save_raw} |
| 14 ${log_transform} | 14 ${log_transform} |
| 15 @INPUT_OPTS@ | 15 @INPUT_OPTS@ |
| 16 @OUTPUT_OPTS@ | 16 @OUTPUT_OPTS@ |
| 17 @EXPORT_MTX_OPTS@ | |
| 17 ]]></command> | 18 ]]></command> |
| 18 | 19 |
| 19 <inputs> | 20 <inputs> |
| 20 <expand macro="input_object_params"/> | 21 <expand macro="input_object_params"/> |
| 21 <expand macro="output_object_params"/> | 22 <expand macro="output_object_params"/> |