Mercurial > repos > ebi-gxa > scanpy_plot_embed

comparison scanpy-plot-embedding.xml @ 17:9fafbfcdee0d draft

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"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/tree/develop/tools/tertiary-analysis/scanpy commit ebe77c8718ec65277f4dc0d71fa5f4c5677df62d-dirty"
author ebi-gxa
date Wed, 05 May 2021 12:12:20 +0000
parents f48cfaa2e515
children a71086d2e55f
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16:7c601934578b 17:9fafbfcdee0d
87 <test> 87 <test>
88 <param name="input_obj_file" value="find_cluster.h5"/> 88 <param name="input_obj_file" value="find_cluster.h5"/>
89 <param name="input_format" value="anndata"/> 89 <param name="input_format" value="anndata"/>
90 <param name="basis" value="X_pca"/> 90 <param name="basis" value="X_pca"/>
91 <param name="color_by" value="louvain"/> 91 <param name="color_by" value="louvain"/>
92 <param name="use_raw" value="false"/>
92 <output name="output_png" file="plot_embed.png" ftype="png" compare="sim_size"/> 93 <output name="output_png" file="plot_embed.png" ftype="png" compare="sim_size"/>
93 </test> 94 </test>
94 </tests> 95 </tests>
95 96
96 <help><![CDATA[ 97 <help><![CDATA[