Mercurial > repos > ebi-gxa > scanpy_regress_variable
comparison scanpy-regress-variable.xml @ 13:8205e95227e4 draft
"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/tree/develop/tools/tertiary-analysis/scanpy commit 9028e8fa3761fd640dcace5d36bf9b7d558319f7-dirty"
| author | ebi-gxa |
|---|---|
| date | Wed, 09 Sep 2020 13:02:29 +0000 |
| parents | e277d77dc6da |
| children | 59d3ce1cfaa8 |
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| 12:e277d77dc6da | 13:8205e95227e4 |
|---|---|
| 11 PYTHONIOENCODING=utf-8 scanpy-regress | 11 PYTHONIOENCODING=utf-8 scanpy-regress |
| 12 --keys '${variable_keys}' | 12 --keys '${variable_keys}' |
| 13 @INPUT_OPTS@ | 13 @INPUT_OPTS@ |
| 14 @OUTPUT_OPTS@ | 14 @OUTPUT_OPTS@ |
| 15 #else | 15 #else |
| 16 echo "No regression variables passed, simply passing original input as output unchanged."; | 16 echo "No regression variables passed, simply passing original input as output unchanged." && cp '${input_obj_file}' output.h5 |
| 17 cp '${input_obj_file}' '${output_h5}' | |
| 18 #end if | 17 #end if |
| 19 ]]></command> | 18 ]]></command> |
| 20 | 19 |
| 21 <inputs> | 20 <inputs> |
| 22 <expand macro="input_object_params"/> | 21 <expand macro="input_object_params"/> |