Mercurial > repos > ebi-gxa > scanpy_regress_variable

diff scanpy-regress-variable.xml @ 5:b174cb4cb89e draft

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planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/tree/develop/tools/tertiary-analysis/scanpy commit 400799f99ee36ad12b990b1ccabf4be16a26c003
author ebi-gxa
date Mon, 25 Nov 2019 14:36:01 -0500
parents 203fac3b1ba3
children 5d112debfa2e
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--- a/scanpy-regress-variable.xml	Wed Nov 20 05:11:01 2019 -0500
+++ b/scanpy-regress-variable.xml	Mon Nov 25 14:36:01 2019 -0500
@@ -1,5 +1,5 @@
 <?xml version="1.0" encoding="utf-8"?>
-<tool id="scanpy_regress_variable" name="Scanpy RegressOut" version="@TOOL_VERSION@+galaxy1">
+<tool id="scanpy_regress_variable" name="Scanpy RegressOut" version="@TOOL_VERSION@+galaxy6">
   <description>variables that might introduce batch effect</description>
   <macros>
     <import>scanpy_macros2.xml</import>
@@ -29,7 +29,7 @@
   </inputs>
 
   <outputs>
-    <data name="output_h5" format="h5" from_work_dir="output.h5" label="${tool.name} on ${on_string}: Scaled data"/>
+    <expand macro="output_data_obj" description="Regressed out ${variable_keys}"/>
   </outputs>
 
   <tests>