Mercurial > repos > ebi-gxa > score_genes_aucell

comparison test-data/progeny_test.tsv @ 2:c700f0381e84 draft

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planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/ commit 1034a450c97dcbb77871050cf0c6d3da90dac823
author ebi-gxa
date Fri, 15 Mar 2024 12:18:05 +0000
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comparison
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1:e024d8280886 2:c700f0381e84
1 source target weight p_value
2 0 Androgen TMPRSS2 11.490631 0.0
3 1 Androgen NKX3-1 10.622551 2.2e-44
4 2 Androgen MBOAT2 10.472733 4.6e-44
5 3 Androgen KLK2 10.176186 1.94441e-40
6 4 Androgen SARG 11.386852 2.79021e-40
7 5 EGFR LZTFL1 -1.8738769 2.0809955e-18
8 6 EGFR PHLDA2 3.5051384 2.0530624e-17
9 7 EGFR DUSP6 12.6293125 6.537324e-17
10 8 EGFR DUSP5 7.9430394 6.86669e-17
11 9 EGFR PHLDA1 6.619626 3.4106933e-16
12 10 Estrogen GREB1 17.240173 0.0
13 11 Estrogen RET 10.718027 0.0
14 12 Estrogen TFF1 14.430255 0.0
15 13 Estrogen HEY2 11.482369 3.1e-44
16 14 Estrogen RAPGEFL1 10.544896 5.2e-43
17 15 Hypoxia FAM162A 8.335551 0.0
18 16 Hypoxia NDRG1 22.08712 0.0
19 17 Hypoxia ENO2 14.32694 0.0
20 18 Hypoxia PDK1 13.120449 0.0
21 19 Hypoxia ANKRD37 8.484976 0.0
22 20 JAK-STAT OAS1 15.028714 1.058e-41
23 21 JAK-STAT HERC6 8.769676 1.3450407e-38
24 22 JAK-STAT OAS3 10.618842 1.2143582e-37
25 23 JAK-STAT PLSCR1 8.481604 8.955206e-37
26 24 JAK-STAT DDX60 12.198234 9.150971e-36
27 25 MAPK DUSP6 16.859016 0.0
28 26 MAPK SPRED2 3.5018346 0.0
29 27 MAPK SPRY2 9.481585 9.19e-43
30 28 MAPK ETV5 5.9887094 6.7425e-41
31 29 MAPK EPHA2 6.3140125 3.7492e-40
32 30 NFkB NFKB1 9.513637 0.0
33 31 NFkB CXCL3 22.946114 0.0
34 32 NFkB NFKB2 5.5155754 0.0
35 33 NFkB NFKBIA 11.444533 0.0
36 34 NFkB BCL2A1 14.416924 0.0
37 35 PI3K MLANA -9.985743 1.84e-43
38 36 PI3K PMEL -6.5903482 6.8747866e-36
39 37 PI3K FAXDC2 -12.421274 3.297515e-34
40 38 PI3K HSD17B8 -8.601571 9.948224e-34
41 39 PI3K CTSF -9.172143 1.0235212e-31
42 40 TGFb LINC00312 4.428987 2.0074443e-17
43 41 TGFb TSPAN2 5.502326 3.1451768e-16
44 42 TGFb SMAD7 7.6311436 7.3087106e-16
45 43 TGFb NOX4 5.913813 3.8292238e-15
46 44 TGFb COL4A1 6.3374896 9.052501e-15
47 45 TNFa CSF2 8.35548 0.0
48 46 TNFa CXCL5 10.0813675 0.0
49 47 TNFa NFKBIE 10.356205 0.0
50 48 TNFa TNFAIP3 35.40072 0.0
51 49 TNFa EFNA1 18.63111 0.0
52 50 Trail FRMPD1 -2.2346141 9.378505e-07
53 51 Trail WT1-AS 2.2251053 2.0316747e-06
54 52 Trail WNT8A -1.8469616 3.795469e-05
55 53 Trail GPR18 3.240805 6.1090715e-05
56 54 Trail TEC 2.0513217 6.32898e-05
57 55 VEGF CRACD -4.87119 6.7185365e-25
58 56 VEGF VWA8 -3.6068044 1.4495265e-18
59 57 VEGF NLGN1 -5.618075 2.6587072e-18
60 58 VEGF NRG3 -5.823747 1.0848074e-16
61 59 VEGF KCNK10 2.8833063 1.8129868e-16
62 60 WNT BMP4 5.936831 2.511717e-10
63 61 WNT SIGLEC6 2.0207362 2.347858e-09
64 62 WNT NPY2R 1.3872339 8.666917e-09
65 63 WNT CSF3R 1.9323153 3.0219417e-07
66 64 WNT KRT23 4.1216116 5.463989e-07
67 65 p53 GLS2 6.452465 7.444302e-37
68 66 p53 MDM2 8.193488 2.1194304e-35
69 67 p53 ZNF79 4.020263 4.5987433e-34
70 68 p53 FDXR 11.994496 5.589482e-32
71 69 p53 LCE1B 11.813737 7.8095406e-30