Mercurial > repos > ebi-gxa > seurat_export_cellbrowser
diff seurat_export_cellbrowser.xml @ 5:249392cd0d99 draft
"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/ commit 355bb52d2e9d170b1db237e649657cc14e0a047a"
author | ebi-gxa |
---|---|
date | Fri, 04 Mar 2022 07:28:44 +0000 |
parents | e7d338f8c4fc |
children |
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--- a/seurat_export_cellbrowser.xml Fri Nov 27 13:47:13 2020 +0000 +++ b/seurat_export_cellbrowser.xml Fri Mar 04 07:28:44 2022 +0000 @@ -1,4 +1,4 @@ -<tool id="seurat_export_cellbrowser" name="Seurat Export2CellBrowser" version="@SEURAT_VERSION@+galaxy0"> +<tool id="seurat_export_cellbrowser" name="Seurat Export2CellBrowser" profile="18.01" version="@SEURAT_VERSION@+galaxy0"> <description>produces files for UCSC CellBrowser import.</description> <macros> <import>seurat_macros.xml</import> @@ -33,8 +33,13 @@ <tests> <test> - <param name="rds_seurat_file" ftype="rdata" value="tsne_seurat.rds"/> - <output name="output" value="html_out" compare="sim_size" delta="1000000"/> + <param name="rds_seurat_file" ftype="rdata" value="E-MTAB-6077-3k_features_90_cells-tsne.rds"/> + <param name="markers_file" ftype="txt" value="E-MTAB-6077-3k_features_90_cells-markers.csv"/> + <output name="output" > + <assert_contents> + <has_size value="2182656" delta="200000"/> + </assert_contents> + </output> </test> </tests> <help><![CDATA[